BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313226
Length=678
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23640.1 | Symbols: | unknown protein; LOCATED IN: chloropl... 734 0.0
AT1G23570.2 | Symbols: | Domain of unknown function (DUF220) |... 472 3e-132
AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | c... 440 8e-123
AT1G23580.1 | Symbols: | Domain of unknown function DUF220 | c... 416 1e-115
AT1G23620.1 | Symbols: | pseudogene, hypothetical protein | ch... 411 6e-114
AT1G23690.1 | Symbols: | Domain of unknown function DUF220 | c... 401 4e-111
AT2G27670.1 | Symbols: | Domain of unknown function DUF220 | c... 254 1e-66
AT1G23610.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 156 3e-37
> AT1G23640.1 | Symbols: | unknown protein; LOCATED IN: chloroplast;
EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED
DURING: 4 anthesis, petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein
match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1);
Has 270 Blast hits to 130 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:8367170-8370280 REVERSE LENGTH=1275
Length=1275
Score = 734 bits (397), Expect = 0.0
Identities = 435/454 (96%), Gaps = 0/454 (0%)
Strand=Plus/Plus
Query 1 ATGAGTGTATTTCCTGGATTTGGTGGCTGGATCAATCAGAACATTCAACAGCCTCCTAAG 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATGAGTGTATTTCCTGGATTTGGTGGCTGGATCAATCAGAACATCCAACAGCCTCCTAAG 60
Query 61 GCTGAGTCCAGGAGATCTGAGAATGTTAAATCTAATTTAGTTTCAGAGAAAGATACTAAT 120
|||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||
Sbjct 61 GCTGAGTCCAGGAGATCTAAGAATGTTAAATCTAATTCAGTGTCAGAGAAAGATACTAAT 120
Query 121 AATGAGGAAGGACTAAATTATGAAGAAGAGGAGATGAAGAGGCAACATGAACTTTGGAAA 180
||||||||||||||||||||||| |||||||| | ||||||||| ||||||| ||||||
Sbjct 121 AATGAGGAAGGACTAAATTATGACGAAGAGGAAACCAAGAGGCAAAATGAACTATGGAAA 180
Query 181 GCTGCGGAGAAGAAGCATCCATGGTATGATGCACCTCCTAAGGTGAAGGCAACCAAATCA 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GCTGCAGAGAAGAAGCATCCATGGTATGATGCACCTCCTAAGGTGAAGGCAACCAAATCA 240
Query 241 AGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATCGTGAGATTGAAGAAAGCTGTGGCT 300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 241 AGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATTGTGAGATTGAAGAAAGCTGTGGCA 300
Query 301 TGGGACTTTCTTTGGTGGTCTGGAGATTTTCCGATACATCTAATTGTCGATGTAAACAAA 360
||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 301 TGGGACTTTCTATGGTGGTCTGGAGAATTTCCGATAAATCTAATTGTCGATGTAAACAAA 360
Query 361 AAAGATCTTACAGCAAAATATAAGAAAGAGAAAATGATGTTCATGAAAGTTTTCGAAGGT 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 361 AAAGATCTTACAGCAAAATATAAAAAAGAGAAAATGATGTTCATGAAAGTTTTCGAAGGT 420
Query 421 AACTGGAAAATAGAGCCACTATACGTAGATTCAG 454
|||||||| |||||||||||||| ||||||||||
Sbjct 421 AACTGGAAGATAGAGCCACTATATGTAGATTCAG 454
> AT1G23570.2 | Symbols: | Domain of unknown function (DUF220)
| chr1:8354806-8356364 REVERSE LENGTH=1067
Length=1067
Score = 472 bits (255), Expect = 3e-132
Identities = 532/664 (80%), Gaps = 26/664 (4%)
Strand=Plus/Plus
Query 7 GTATTTCCTGGATTTGGTGGCTGGATCAATCAGAACATTCAACAGCCTCCTAAGGCTGAG 66
|||||| ||||||||||||||||| ||| ||| |||| | ||||||||| ||||| ||
Sbjct 4 GTATTTACTGGATTTGGTGGCTGGGTCAGTCAAAACAATAAACAGCCTCGAAAGGCCAAG 63
Query 67 TCCAGGAGATCTGAGAATGTTAAATCTAATTTAGTTTCAG--A-GAAAGATACTAATAAT 123
||| | | |||| |||||| ||||||| | || |||| | | |||| |||||||
Sbjct 64 CCCAAAAAAACTGAAAATGTTGAATCTAAGTCAGAGTCAGAAATGGTGGATAATAATAAT 123
Query 124 ---GA-G-GAAG--G-ACTAA-ATTATGAAGAAGAGGAGATGAAGAGGCAACATGAACTT 174
| | ||| | | || ||||||| ||||| |||| ||||| ||| || || ||
Sbjct 124 AACCATGATAAGATGAAGAAATATTATGACGAAGATGAGAGGAAGAAACAAGATCAAGTT 183
Query 175 TGGAAAGCTGCGGAGAAGAAGCATCCATGGTATGATGCACCTCCTAAGGTGAAGGCAACC 234
|||| || ||| ||||||| |||||||||| ||||||| ||||| |||||||||| || |
Sbjct 184 TGGATAGATGCAGAGAAGATGCATCCATGGAATGATGCCCCTCCAAAGGTGAAGGAAAGC 243
Query 235 AAATCAAGAAAGGTTTTGAA-GAAGGATGGACCGAGGCAGATCGTG-AGATTGAAGAAAG 292
||||||||||||||||| || | ||||||||||||||||||||| | || ||||||||
Sbjct 244 AAATCAAGAAAGGTTTT-AATGGAGGATGGACCGAGGCAGATCGCGAAG-GTGAAGAAAA 301
Query 293 CTGTGG-CTTGGGACTTTCTTTGGTGGTCTGGAGATTTTCCGATACA-TCTAATTGTCGA 350
| |||| | ||| | || ||| ||| |||| | | | || ||| | ||||||||||||
Sbjct 302 CCGTGGAC-TGGAAATTCCTTGGGTCGTCTTTTGCTGTCCCCATA-AGTCTAATTGTCGA 359
Query 351 TGTAAACAAAAAAGATCTTACAGCAAAATATAAGAAAGAGAAAATGATGTTCATGAAAGT 410
|| ||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 360 TGAAAACAGAAAAGATCTTACAGCAAAATATAAGAAAAAGAAAATGATCTTGATGAAAGT 419
Query 411 TTTCGAAGGTAACTGGAAAATAGAGCCACTATACGTAGATTCAGTCCGCTTGTGCAAGCA 470
||||||||||| || | | | ||||||||||| |||||||||| ||||||||||| |
Sbjct 420 TTTCGAAGGTAGCTATAGAGTGGAGCCACTATATGTAGATTCAGAACGCTTGTGCAATAA 479
Query 471 TAAGGAGCCTAAGAGTCTA-CAAGAATACAAAACATGTAGTGGCGGACAAGGAAGGGTTG 529
| |||||| ||||||| || |||||||||| |||||| || |||||||||||| |||
Sbjct 480 CATGGAGCCGAAGAGTCCGGCA-GAATACAAAAGATGTAGCGGTGGACAAGGAAGGATTG 538
Query 530 CATCGAAAG-TAACAATGGACCAATATTTTCAGCCATATACTCCTTTTAATCTGCCACCA 588
|||| |||| | |||||| ||||||| ||| |||||||| |||||||||||||||| |||
Sbjct 539 CATC-AAAGGTGACAATGAACCAATACTTTAAGCCATATCCTCCTTTTAATCTGCCGCCA 597
Query 589 ATTTCTTGGTTCATTCGTGATATCACCATCAGGACCACCAAAACT-CTGCTCAAAATGCT 647
| ||||||| |||||| | ||||||||| || |||||||||| | ||| |||| ||
Sbjct 598 CTATCTTGGTACATTCGAAAGGTCACCATCAAGAACACCAAAACTGC-GCTGAAAACACT 656
Query 648 TCAA 651
||||
Sbjct 657 TCAA 660
> AT1G23600.1 | Symbols: | Domain of unknown function DUF220 |
chr1:8361004-8362485 REVERSE LENGTH=1134
Length=1134
Score = 440 bits (238), Expect = 8e-123
Identities = 368/430 (86%), Gaps = 12/430 (3%)
Strand=Plus/Plus
Query 228 GGCAACCAAATCAAGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATCGTG-AGATTGA 286
||||| ||||||||||||| |||||||||| |||||||| ||||||| |||| || |||
Sbjct 478 GGCAAACAAATCAAGAAAGATTTTGAAGAAAGATGGACCTAGGCAGACCGTGAAG-GTGA 536
Query 287 AGAAAGCTGTGGCTTGGGACTTTCTTTGGTGGTCTGGAGATTTTCCGA-TACATCTAATT 345
||||||||||||| |||||||| ||||||| |||||| | | || | || || |||||
Sbjct 537 AGAAAGCTGTGGCATGGGACTTCCTTTGGTTCTCTGGATCTCTCCCCATTA-ATTTAATT 595
Query 346 GTCGATGTAAACAAAAAAGATCTT-ACAGCAAAATATAAGAAAGAGAAAATGATGTTCAT 404
||| | | |||||||||||| ||| | || ||||||||||||||| ||||||||||||||
Sbjct 596 GTCAACGAAAACAAAAAAGACCTTGA-AGTAAAATATAAGAAAGAAAAAATGATGTTCAT 654
Query 405 GAAAGTTTTCGAAGGTAACTGGAAAATAGAGCCACTATACGTAGATTCAG-TCCGCTTGT 463
|||||| |||||||||| |||||||||||| |||||||| |||||| ||| | ||||| |
Sbjct 655 GAAAGTGTTCGAAGGTAGCTGGAAAATAGAACCACTATATGTAGATGCAGAT-CGCTTAT 713
Query 464 GCAAGCATAAGGAGCCTAAGAGTCTACAAGAATACAAAACATGTAGTGGCGGACAAGGAA 523
||||| | | | | |||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct 714 GCAAGAACATGAAACCTAAGAGTCGAGAAGAATACAAAAAATGTAGTGGCGGACAAGGAA 773
Query 524 GGGTTGCATCGAAAGTAACAATGGACCAATATTTTCAGCCATATACTCCTTTT-AATCTG 582
||||| | ||||| || |||||||||||||||||||||||| || ||||| ||||||
Sbjct 774 AAATTGCACCAAAAGTGACTATGGACCAATATTTTCAGCCATATCCT-CTTTTAAATCTG 832
Query 583 CCACCAATTTCTTGGT-TCATTCGTGATATCACCATCAGGACCACCAAAACTCTGCTCAA 641
|| || ||||||||| | |||||| | |||||||||| |||||||||||||||||||||
Sbjct 833 CCGCCGTTTTCTTGGTAT-ATTCGTAACATCACCATCAAGACCACCAAAACTCTGCTCAA 891
Query 642 AATGCTTCAA 651
||||||||||
Sbjct 892 AATGCTTCAA 901
Score = 132 bits (71), Expect = 5e-30
Identities = 183/233 (79%), Gaps = 23/233 (10%)
Strand=Plus/Plus
Query 1 ATGAGTGTATTTCCTGGATTTGGTGGCTGGATCAATCAGAACATTCAACAGCCTCCTAAG 60
|||| ||| |||||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct 128 ATGAATGTGTTTCCTGGATTTGGTGGCTGGATCAATCAGAACAATCAACAGCCCCCAAAG 187
Query 61 G-CTGAGTCCAGGAGATCTGAGAATGTTAAATCTAATTT-AGTTTCAGAGAAAGATACTA 118
| | ||||||| |||||||||||| ||||||||||| | | | | || | |||||||
Sbjct 188 GGC-GAGTCCAAGAGATCTGAGAACGTTAAATCTAACTCGAATA-CGGATATGGATACTA 245
Query 119 ATAATGAG-GAAGGACTAAATTATGAAGAAGAGGAGATGAAGAGGCAACATGAA-CTTTG 176
||||| | |||| | | | | || | ||| | | ||| |||| | || |||||
Sbjct 246 ATAAT-ACCGAAG-A-TGA-T---GA-G--GAG-AT-T-AAG---CAAC-TAAATCTTTG 288
Query 177 GAAAGCTGCGGAGAAGAAGCATCCATGGTATGATGCACCTCCTAAGGTGAAGG 229
|| | ||| |||||||||||||||||||||||| | ||||| || |||||||
Sbjct 289 GAGTGATGCAGAGAAGAAGCATCCATGGTATGATCCCCCTCCAAAAGTGAAGG 341
> AT1G23580.1 | Symbols: | Domain of unknown function DUF220 |
chr1:8357446-8358805 REVERSE LENGTH=1002
Length=1002
Score = 416 bits (225), Expect = 1e-115
Identities = 343/400 (86%), Gaps = 8/400 (2%)
Strand=Plus/Plus
Query 234 CAAATCAAGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATCGTG-AGATTGAAGAAAG 292
|||||||||||||||||||||| | ||||||||||||||||||| | || |||||||||
Sbjct 456 CAAATCAAGAAAGGTTTTGAAGGACGATGGACCGAGGCAGATCGCGAAG-GTGAAGAAAG 514
Query 293 CTGTGGCTTGGGACTTTC-TTTGGTGGTCTGGAGATTTTCCGATACA-TCTAATTGTCGA 350
||||||| ||| || ||| | || ||||| | | | || ||| | ||||||||||||
Sbjct 515 CTGTGGCCTGGAAC-TTCAGTGGGAGGTCTATTGCTATCCCCATA-AGTCTAATTGTCGA 572
Query 351 TGTAAACAAAAAAGATCTTACAGCAAAATATAAGAAAGAGAAAATGATGTTCATGAAAGT 410
|| ||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 573 TGAAAACAGAAGAGATCTTACAGCGAAATATAAAAAAGAGAAAATGATGTTCATGAAAGT 632
Query 411 TTTCGAAGGTAACTGGAAAATAGAGCCACTATACGTAGATTCAGTCCGCTTGTGCAAGCA 470
||||| |||| || ||| | ||||| |||||||||||||||| ||||| |||||| |
Sbjct 633 ATTCGAGGGTAGCTATAAAGTGGAGCCTGTATACGTAGATTCAGTACGCTTATGCAAGAA 692
Query 471 TAAGGAGCCTAAGAGTCTACAAGAATACAA-AACATGTAGTGGCGGACAAGGAAGGGTTG 529
||| |||| |||||| || | |||||||| || |||||||||||||||||||| | |||
Sbjct 693 CAAGAAGCCGAAGAGTGTAGATGAATACAAGAA-ATGTAGTGGCGGACAAGGAAAGATTG 751
Query 530 CATCGAAAGTAACAATGGACCAATATTTTCAGCCATATACTCCTTTTAATCTGCCACCAA 589
|||||||||| ||||||||||||||||||||||||||| ||||||||||||| || |||
Sbjct 752 CATCGAAAGTGACAATGGACCAATATTTTCAGCCATATCCTCCTTTTAATCTACCGCCAT 811
Query 590 TTTCTTGGTTCATTCGTGATATCACCATCAGGACCACCAA 629
|||||||||||||||||||||||||||||| || |||||
Sbjct 812 TTTCTTGGTTCATTCGTGATATCACCATCAAGAATACCAA 851
> AT1G23620.1 | Symbols: | pseudogene, hypothetical protein |
chr1:8364662-8366449 REVERSE LENGTH=1788
Length=1788
Score = 411 bits (222), Expect = 6e-114
Identities = 271/295 (92%), Gaps = 2/295 (1%)
Strand=Plus/Plus
Query 370 ACA-GCAAAATATAAGAAAGAGAAAATGATGTTCATGAAAGTTTTCGAAGGTAACTGGAA 428
||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1390 ACAGGCAAAATATAAAAAAGAGAAAATGATGTTCATGAAAGTATTCGAAGGTAACTATAA 1449
Query 429 AATAGAGCCACTATACGTAGATTCAGTCCGCTTGTGCAAGCATAAGGAGCCTAAGAGTCT 488
| | ||||||||||| ||||||||||| ||||||||||| |||||||||| |||||| |
Sbjct 1450 AGTGGAGCCACTATATGTAGATTCAGTACGCTTGTGCAATAATAAGGAGCCAAAGAGTTT 1509
Query 489 ACAAGAATACAAAACATGTAGTGGCGGACAAGGAAGGGTTGCATCGAAAGTAACAATGGA 548
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1510 TCAAGAATACAAAACATGTAGTGGCGGACAAGGAAGGATTGCATCGAAAGTAACAATGGA 1569
Query 549 CCAATATTTTCAGCCATATACTCCTTTTAA-TCTGCCACCAATTTCTTGGTTCATTCGTG 607
|||||| |||||||||||| |||||||||| ||| |||||| ||||||||||||| ||||
Sbjct 1570 CCAATACTTTCAGCCATATCCTCCTTTTAAATCTACCACCATTTTCTTGGTTCATCCGTG 1629
Query 608 ATATCACCATCAGGACCACCAAAACTCTGCTCAAAATGCTTCAACATGCGAGTGT 662
|||| |||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1630 ATATAACCATCAGGACCACCATAACCCTGCTCAAAATGCTTCAACATGCGAGTGT 1684
> AT1G23690.1 | Symbols: | Domain of unknown function DUF220 |
chr1:8377262-8378769 REVERSE LENGTH=1128
Length=1128
Score = 401 bits (217), Expect = 4e-111
Identities = 364/434 (84%), Gaps = 14/434 (3%)
Strand=Plus/Plus
Query 234 CAAATCAAGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATCGTGAGATTGAAGAAAGC 293
|||||||||||||||||||| ||| |||||||||||||||| || | | ||| |||||||
Sbjct 510 CAAATCAAGAAAGGTTTTGATGAAAGATGGACCGAGGCAGAGCGCGCGGTTGGAGAAAGC 569
Query 294 TGTGGCTTGGGACTTTCTTTGGTGGTCTGGAGATTTTCCGA--TACATCTAATTGTCGAT 351
| || | |||||| |||||||||||| ||||| |||||| | ||| ||||||||| |||
Sbjct 570 TCTGACCTGGGACGTTCTTTGGTGGTGTGGAGCTTTTCC-ATTTAC-TCTAATTGTTGAT 627
Query 352 GTAAA-CAAAAAAGATC-TTACAGCAAAATATAAGAAAGAGAAAATGATGTTCATGAAAG 409
| ||| ||||||| | | ||| || || ||||| |||||||||||||| ||| ||||||
Sbjct 628 GAAAACCAAAAAA-A-CTTTAGAGGAAGATATATGAAAGAGAAAATGAAGTTTATGAAA- 684
Query 410 T-TTTCGAAGGTAACTGGAAAATAGAGCCACTATACGTAGATTCAGTCCGCTTGTGCAAG 468
| ||| || ||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 685 TATTTTGAGGGTAAATGGAAAATAGAGCCACTATACGTAGATTCAGAACGCTTGTGCAAG 744
Query 469 CATAAGGA-GCCTAAGAGTCTACAAGAATACAAAACATGTAGTGGCGGACAAGGAAGGGT 527
| | | | ||| ||||||| | |||||||||||| |||||| |||||| |||||| |||
Sbjct 745 GACA-GAAAGCCGAAGAGTCGAGAAGAATACAAAAGATGTAGCGGCGGAGAAGGAAAGGT 803
Query 528 TGCATCGAAAGTAACAATGGACCAATATTTTCAGCCATATACTCCTT-TTAATCTGCCAC 586
|||||||||||| |||||||||||||| || || || ||| || || ||||||| ||||
Sbjct 804 TGCATCGAAAGTGACAATGGACCAATACTTCCAACCTTATTTTC-TTCTTAATCTACCAC 862
Query 587 CAATTTCTTGGTTCATTCGTGATATCACCATCAGGACCACCAAAACTCTGCTCAAAATGC 646
|| ||||||||| |||||||| |||||||||| |||||||||| |||||||| | ||
Sbjct 863 CACTTTCTTGGTACATTCGTGGGATCACCATCAAAACCACCAAAAATCTGCTCATATTGA 922
Query 647 TTCAACATGCGAGT 660
||||| |||| |||
Sbjct 923 TTCAAAATGCAAGT 936
> AT2G27670.1 | Symbols: | Domain of unknown function DUF220 |
chr2:11801568-11802891 REVERSE LENGTH=882
Length=882
Score = 254 bits (137), Expect = 1e-66
Identities = 317/401 (79%), Gaps = 23/401 (6%)
Strand=Plus/Plus
Query 230 CAACCAAATCAAGAAAGGTTTTGAAGAAGGATGGACCGAGGCAGATCGTGAGATTGAAGA 289
||| |||||||| |||||||||||||||||| |||||| |||||||| |||| |||| |
Sbjct 420 CAA-CAAATCAACAAAGGTTTTGAAGAAGGACGGACCGCGGCAGATCACGAGAGTGAAAA 478
Query 290 AAGCTGTG-GCT-TGGGACTTTCTTTGGTGGTCTGGAGATTTTCCGATACATCTAATTGT 347
|| || || | | | | | | ||| || | ||| || | | |||||||||||||| |
Sbjct 479 AAACTTTGAGATATAAG-C-TCCTTGGGCGCTCTATAGCTATCCCGATACATCTAATCAT 536
Query 348 CGATGTAAA-CAAAAAAGATCTTACAGCAAAATATAAGAAAGAGAAAATGATGTTCATGA 406
||||| ||| || |||| | || || |||||||||||||||||||||||||||| |||||
Sbjct 537 CGATGAAAACCATAAAA-ACCTAACGGCAAAATATAAGAAAGAGAAAATGATGTACATGA 595
Query 407 AAGT-TTTCGAAGGTA-ACTGGAAAATAGAGCCACTATACGTAGATTCAGTC-CGCTTGT 463
|||| ||| || |||| | |||||| | ||||||||||||| |||| ||| ||||| |
Sbjct 596 AAGTGTTT-GAGGGTAGA-TGGAAAGTGGAGCCACTATACGCAGAT-CAGGAACGCTTAT 652
Query 464 GCAAG-CATAAGGA-GCCTAAGAGTCTACAAGAATACAAAACATGTAGTGGCGGACAAGG 521
||||| | || || || | | | | |||| ||||||| |||||||| |||| ||||
Sbjct 653 GCAAGTC-TA-GGTCGCGGATTAATGAAGAAGAGTACAAAAAATGTAGTGACGGAAAAGG 710
Query 522 AAGGGTTGCATCGAAAG-TAACAATGGACCA-ATATTTTCAGCCATATACTCCTT-TTAA 578
|||| ||| ||| |||| | |||||||| || || ||| ||||| | | ||| || ||||
Sbjct 711 AAGGATTGGATC-AAAGGTGACAATGGAGCAGATCTTT-CAGCCTTGTTCTC-TTCTTAA 767
Query 579 TCTGCCACCAATTTCTTGGTTCATTCGTGATATCACCATCA 619
| ||||||| |||||||||||||| ||||| ||||||||||
Sbjct 768 TGTGCCACCGATTTCTTGGTTCATCCGTGAGATCACCATCA 808
> AT1G23610.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G23640.1);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr1:8362864-8363675 REVERSE LENGTH=667
Length=667
Score = 156 bits (84), Expect = 3e-37
Identities = 108/120 (90%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1 ATGAGTGTATTTCCTGGATTTGGTGGCTGGATCAATCAGAACATTCAACAGCCTCCTAAG 60
||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||
Sbjct 103 ATGAGTGTATTTCCTGGATTTGGTGGCTGGATCAATCAGAATATTCAACAACGTCCTGAG 162
Query 61 GCTGAGTCCAGGAGATCTGAGAATGTTAAATCTAATTTAGTTTCAGAGAAAGATACTAAT 120
||||| || |||||||||||||||||||||||| | ||| ||||||||||| ||||||
Sbjct 163 GCTGAATCTGGGAGATCTGAGAATGTTAAATCTAGTCCAGTGTCAGAGAAAGACACTAAT 222
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 32802897991
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5