BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313253
Length=1659
Score E
Sequences producing significant alignments: (Bits) Value
AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-li... 2643 0.0
AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-... 1336 0.0
AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase li... 1221 0.0
AT4G16590.1 | Symbols: ATCSLA01, CSLA01, ATCSLA1 | cellulose sy... 806 0.0
> AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-like
A10 | chr1:8516238-8519734 REVERSE LENGTH=1858
Length=1858
Score = 2643 bits (1431), Expect = 0.0
Identities = 1584/1660 (95%), Gaps = 2/1660 (0%)
Strand=Plus/Plus
Query 1 ATGACTACGTTTCTGAAGTCACTCATCTCCTTACAAGATTCATGTCTTGCCTTCTTCTCT 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1 ATGACTACGTTTCTGAAGTCACTCATCTTCTTACAAGATTCATGTCTTGCCTTCCTCTCT 60
Query 61 CTACTGTTCCATGGAGGGAGTTCTGAAGATGCAGCTGAAGCTCCCAAGAAGCTTGAAGCA 120
||| |||||||| ||||||||||||| |||||||||||||||| ||||||||||||| ||
Sbjct 61 CTAATGTTCCATCGAGGGAGTTCTGAGGATGCAGCTGAAGCTCTCAAGAAGCTTGAAACA 120
Query 121 TCCATAAATGGTGTGAGGATAAGCATCGACACGACATGGACAGGAGAATTGAGAAGCTTC 180
||||||||||||| |||||||||| ||||||||||||||||| ||||||| || |||||
Sbjct 121 TCCATAAATGGTGCGAGGATAAGCTTCGACACGACATGGACACGAGAATTTAGGAGCTTA 180
Query 181 CTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATGATCTCCCTCTTAGTT 240
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 181 TTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTTTTTGTTTGATAATCTCCCTCTTAGTT 240
Query 241 TTCATAGAGGGTATATACATGAACCTTGTAGTACTCTATGTCAAGTTGTTTAACCGAAAA 300
|||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||
Sbjct 241 TTCATAGAGGGTATATACATGAACCTTGTAGTACTCTACGTCAAGGTGTTTGAGCGAAAA 300
Query 301 CCGGAAAAAATCTACAAATGGGAGCCGATGCCGGAGGACATTGAGCTCGGACATGAAACC 360
|| |||||| | || | ||||||| |||||| |||||||||||||| ||||||||||||
Sbjct 301 CCCGAAAAAGTTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCTTGGACATGAAACC 360
Query 361 TACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCT 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TACCCCATGGTCCTTGTCCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCT 420
Query 421 ATAGGTGCTGTATGTAGACTAATCTGGCCATTGGATCGCCTAATTGTTCAAGTTCTAGAT 480
|||||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||
Sbjct 421 ATAGGTGCTGCATGTAGACTAATATGGCCATTGGACCGCCTAATTGTTCAAGTTTTAGAT 480
Query 481 GATTCCACTGATCAAACCATGAAGGGGCTGGTGAACACAGAGTGTGCAAAATGGGAAAGC 540
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 481 GATTCCACTGATCAAACCATCAAGGAGCTGGTGAACACAGAGTGTGCAAAATGGGAAAGC 540
Query 541 AAAGGCGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCT 600
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 541 AAAGGTGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTACAAAGCCGGAGCT 600
Query 601 CTTAAACAAGGCATGAAGCACAATTACGTGAAGCTATGCAACTATGTTGTCATCTTTGAC 660
|||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||
Sbjct 601 CTTAAAGAAGGCATGAAGCACAACTACGTGAAGCTATGCAATTATGTCGTCATCTTCGAC 660
Query 661 GCAGACTTTCAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCATTCCTCGTCCATAAC 720
|||||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct 661 GCAGACTTCCAACCGGAGCCTGATTACCTCCAACACTCTGTCCCCTTCCTCGTTCATAAC 720
Query 721 CCCGAGGTCGCTCTTGTTCAAGCCCGTTGGAGATTCATGAACGCAAACAAGTGCTTGATG 780
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 721 CCCGAGGTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACGCAAACAAGTGCTTGATG 780
Query 781 ACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCAGAACAAGAATCTGGATCC 840
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 781 ACGAGGATGCAAGAGATGTCCCTCAACTACCACTTTATGGCAGAGCAAGAATCTGGATCC 840
Query 841 ACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 ACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATG 900
Query 901 GAAGAAGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTTCGT 960
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 901 GAAGAAGCTGGAGGATGGCATGACCGGACTACTGTAGAGGACATGGACTTGGCCGTTCGT 960
Query 961 GCTGGTCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACGGTGAAAAGCGAATTA 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 961 GCTGGTCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACGGTGAAAAGCGAGTTA 1020
Query 1021 CCAAGCAAATTTAAGGCCTTCAGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAAT 1080
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1021 CCAAGCAAGTTTAAGGCCTTTAGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAAT 1080
Query 1081 CTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAG 1140
Query 1141 TTGTATTTGGTCTACAGCTTCTTTTTCTTACGGAAGATCATCGTCCACTGCTTCACGTTT 1200
|||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1141 TTGTATCTGGTCTACAGCTTCTTTTTCTTACGGAAGATCATAGTCCACTGCTTCAC-TTT 1199
Query 1201 TCGTT-CTACTGCGTTATTCTTCCTACAAGTGTCTTCTTCCCCGAAGTCAACATTCCAGC 1259
| || |||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1200 TATTTTCTACTGTGTTATTCTTCCTACAAGTGTCTTCTTTCCCGAAGTCAACATTCCAGC 1259
Query 1260 TTGGTCAACTTTTTACATTCCGTCTATGATCACTCTCTGCATCGTCATTGCGACACCAAG 1319
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1260 TTGGTCAACTTTTTACATTCCCTCTATGATCACTCTCTGCATTGTCATTGCGACACCAAG 1319
Query 1320 ATCATTCTACTTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGAC 1379
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 ATCATTCTACCTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGAC 1379
Query 1380 GAAGGGAACTTTCATCGGCATACTCGAAAAACAAAGAGTTAACGAATGGGTTGTCACTGA 1439
|| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1380 AAAAGGAACTTTCATCGGCATACTCGAAAGACAAAGAGTGAACGAATGGGTTGTCACTGA 1439
Query 1440 GAAATTAGGAGATGCTCTTAAGACTAAGCTACTTCCTCGGATTGGAAAACCTAGTAACGG 1499
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1440 GAAATTAGGAGATGCTCTTAAGACTAAGCTACTTCCTAGGATTGGAAAACCTAGTAACAT 1499
Query 1500 GTTTCTTGAAAGAGTAAACTCCAAGGAGGTAATGGTGGGGATATACATCTTGTGTTGTGC 1559
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1500 GTTTCTTGAAAGAGTAAACTCCAAGGAGATAATGGTGGGGATATACATCTTGTGTTGTGC 1559
Query 1560 TTGCTATGGACTTTTCTTTGGGAACACATTGTTATATCTCTATCTCTTCATGCAAGCGGT 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 TTGCTATGGACTTTTCTTTGGGAACACATTGTTATATCTCTATCTCTTCATGCAAGCGGT 1619
Query 1620 TGCTTTTCTCGTATCCGGAGTTGGCTTTGTCGGCACTTAA 1659
|||||||||| |||| ||||||||||||||||||||||||
Sbjct 1620 TGCTTTTCTCATATCTGGAGTTGGCTTTGTCGGCACTTAA 1659
> AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-sugar
transferases superfamily protein | chr4:7792219-7795824
REVERSE LENGTH=1614
Length=1614
Score = 1336 bits (723), Expect = 0.0
Identities = 1244/1493 (83%), Gaps = 46/1493 (3%)
Strand=Plus/Plus
Query 184 ATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATGATCTCCCTCTTAGTTTTC 243
|||||||| || ||||||||| | |||| | | |||||||| ||||| ||||||||||||
Sbjct 151 ATAGTTCCATTGTTCAAGTGTATAGTGGTTATGTGTTTGATCATCTCGCTCTTAGTTTTC 210
Query 244 ATAGAGGGTATATACATGAACCTTGTAGTACTCTATGTCAAGTTGTTTAACCGAAAACCG 303
| ||| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 GTTGAGAGTGTTTACATGAACCTTGTAGTACTCTATGTCAAGTTGTTTAACCGAAAACCA 270
Query 304 GAAAAAATCTACAAATGGGAGCCGATGCCGGAGGACATTGAGCTCGGACATGAAACCTAC 363
|| ||| |||||||||||||| | |||| |||||| || ||||| || ||| ||| ||
Sbjct 271 GAGAAAGTCTACAAATGGGAGGCAATGCAGGAGGATATGGAGCTTGGTCATCAAAATTAT 330
Query 364 CCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCTATA 423
|| ||||||||||||||||| ||||||||||||||| ||||||| || |||||||||||
Sbjct 331 CCGATGGTCCTTGTTCAAATCCCAATGTACAACGAACGAGAGGTCTTTGAATTATCTATA 390
Query 424 GGTGCTGTATGTAGACTAATC-TGGCCATTGGATCGCCTAATTGTTCAAGTTCTAGATGA 482
||||||| || ||||||| | ||||||| ||| || ||||||||||||||| |||||||
Sbjct 391 GGTGCTGCGTGCAGACTAA-CATGGCCATCGGACCGTCTAATTGTTCAAGTTTTAGATGA 449
Query 483 TTCCACTGATCAAACCATGAAGGGGCTGGTGAACACAGAGTGTGCAAAATGGGAAAGCAA 542
|||||| |||| | | || | || ||||||| || || ||| ||||||||| | |||
Sbjct 450 TTCCACCGATCCAGCAATCATGGAACTGGTGAGCATGGAATGTACAAAATGGGCAT-CAA 508
Query 543 AGG-CGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCTC 601
| | | |||||||||| | ||||||| |||| |||||||||||||| || || |||||||
Sbjct 509 AAGACATAAATATAAATTATGAGAGGCGAGAGAACAGAAATGGCTACAAGGCTGGAGCTC 568
Query 602 TTAAACAAGGCATGAAGCACAATTACGTGAAGCTA-TGC-AACTATGTTGTCATCTTTGA 659
|||| || ||||||| ||||| |||||| |||| | ||| || ||| ||| |||||||||
Sbjct 569 TTAAGCACGGCATGAGGCACAGTTACGTCAAGC-AGTGCCAA-TATCTTGCCATCTTTGA 626
Query 660 CGCAGACTTTCAA-CCGGAGCCTGATTACCTCCAACGCTCTGTCCCATTCCTCGTCCATA 718
|| || |||| | || ||||| ||||||||||||||| || |||| || || |||| |
Sbjct 627 TGCTGA-TTTCCAGCCCGAGCCCGATTACCTCCAACGCGCTATCCCCTTTCTTATCCACA 685
Query 719 ACCCCGAGGTCGCTCTTGTTCAAGCCCGTTGGAGATTCATGAACGCAAACA-AGTGCTTG 777
|||| |||||||||||||| ||||| || |||||||| | ||||| |||| | |||||
Sbjct 686 ACCCTGAGGTCGCTCTTGTCCAAGCTCGATGGAGATTTGTAAACGCTAACACA-TGCTTA 744
Query 778 ATGACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCAGAACAAGAATCTGGA 837
||||||||||||||||||||||| || |||||||| ||||||||||| ||| ||||||||
Sbjct 745 ATGACGAGGATGCAAGAGATGTCTCTGAACTACCATTTCATGGCAGAGCAACAATCTGGA 804
Query 838 TCCACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCG 897
||||| |||||||| |||||| |||| |||||||||||||| ||||||||||||| |||
Sbjct 805 TCCACAAGACATGCTTTCTTTGGCTTTAATGGAACTGCGGGAGTATGGAGAATGGTGGCG 864
Query 898 ATGGAAGAAGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTT 957
||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||
Sbjct 865 ATGGAAGAAGCTGGAGGATGGAAGGACCGGACGACGGTAGAGGACATGGACTTGGCCGTT 924
Query 958 CGTGCTGGTCTTCTCGGCTGGAAATTTGTCTTTC-TCAATGACCTC-ACGGTGAAAAGCG 1015
|||| |||||||||||| ||||||||| |||| | ||||||||||| | ||| |||||||
Sbjct 925 CGTGTTGGTCTTCTCGGTTGGAAATTTATCTT-CGTCAATGACCTCGA-GGTTAAAAGCG 982
Query 1016 AATTACCAAGCAAATTTAAGGCCTT-CAGATTCCAGCAACATCGATGGTCTTGTGGTCCA 1074
| |||||||| ||||||||||||| | ||||||| || ||||| |||||||||||||||
Sbjct 983 AGCTACCAAGCCAATTTAAGGCCTTTC-GATTCCAACAGCATCGGTGGTCTTGTGGTCCA 1041
Query 1075 GCTAATCTC-TTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGACGATTTG 1133
|| ||||| || |||||||||| ||||| ||||||| |||||||||||||| ||||||
Sbjct 1042 GCCAATCTTATT-AGGAAAATGACGATGGAAATTATTCACAATAAGAGAGTGAAGATTTG 1100
Query 1134 GAAGAAGTTGTATTTGGTCTACAGCTTCTTTTTCTTACGGAAGATCATCGTCCACTGCTT 1193
||||||||| || || ||||||||||||||||| ||||||||||| | ||||||| |||
Sbjct 1101 GAAGAAGTTTTACGTGATCTACAGCTTCTTTTTCCTACGGAAGATCGTAGTCCACTTCTT 1160
Query 1194 CACGT-TTTCGTTCTACTGCGTTATTCTTCCTACAAGTGTCTTC-TTCCCCGAAGTCAAC 1251
||| | |||| || ||||| || ||||||||||||||||||||| ||||| ||||| ||
Sbjct 1161 CACTTATTTCTTT-TACTGTGTCATTCTTCCTACAAGTGTCTTCCTTCCC-GAAGTAAAT 1218
Query 1252 ATTCC-AGCTTGGTCAACTTTTTACATTCCGTCTATGATCACTCTCT-GCA-TCGTCATT 1308
|| || | || |||||||| | || |||| ||| | ||||| |||| | | | | ||||
Sbjct 1219 ATACCGAACT-GGTCAACTATATATGTTCCTTCTGTCATCACCCTCTTG-AGT-GCCATT 1275
Query 1309 GCGACACCAAGATCATTCTACTTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCT 1368
|| || ||||||||||||||| ||||||| |||||| |||| || ||||| |||||| ||
Sbjct 1276 GCCACTCCAAGATCATTCTACCTCGTGATTTTTTGGGTCTTATTCGAAAATGTAATGGCT 1335
Query 1369 ATGCACCGGACGAAGGGAACTTTCATCGGCATACTCGAAAAACAAAGAGTTAACGAATGG 1428
||||||||||| ||||||||||| || ||| || | ||| | |||||| || ||||||
Sbjct 1336 ATGCACCGGACCAAGGGAACTTTGATTGGCTTATTTGAAGGAGGAAGAGTCAATGAATGG 1395
Query 1429 GTTGTCACTGAGAAATTAGGAGATGCTCTTAAGACTAAGCTACTTCCTCGGATTGGAAAA 1488
|||||||| ||||||||||||||| ||||||| |||||||||||||| | || ||||
Sbjct 1396 GTTGTCACAGAGAAATTAGGAGATACTCTTAACACTAAGCTACTTCCCCAGAATGGA--- 1452
Query 1489 CCTAGTAACGGGTTTCTTGAAA-GAGTAAACTCCAAGGAGGTAATGGTGGGGATATACAT 1547
| | | | || | |||| ||||||| | |||||| | ||| |||| ||||||||
Sbjct 1453 C---G-A-C---TTCC--GAAAAGAGTAAATTTGAAGGAGATGATGATGGGTATATACAT 1502
Query 1548 CTTGTGTTGTGCTTGCTATGGACTTTTC-TTTGGGAACACATTGTTATATCTCTATCTCT 1606
|| |||||||||||||| | ||||| | ||||| || |||| |||||| | |||||||
Sbjct 1503 ATTATGTTGTGCTTGCTACG-ACTTTGCATTTGGAAATGCATTTTTATATTTGTATCTCT 1561
Query 1607 TCATGCAAGCGGTTGCTTTTCTCGTATCCGGAGTTGGCTTTGTCGGCACTTAA 1659
|||||||||| |||||||||| | ||||||||||||||||| || ||||||
Sbjct 1562 TCATGCAAGCCACTGCTTTTCTCATCTCCGGAGTTGGCTTTGTTGGAACTTAA 1614
> AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase
like A11 | chr5:5283550-5286293 REVERSE LENGTH=1445
Length=1445
Score = 1221 bits (661), Expect = 0.0
Identities = 1121/1342 (84%), Gaps = 36/1342 (3%)
Strand=Plus/Plus
Query 334 GAGGACATT-GAGCTCGGACATGAAACCTACCCCATGGTCCTTGTTCAAATTCCAATGTA 392
|||||| || ||||||||| || ||| || |||||||| ||||| ||||| ||||||||
Sbjct 7 GAGGAC-TTGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCAATGTA 65
Query 393 CAACGAAAAAGAGGTCCTTCAA-TTATCTATAGGTGCTG-TATGTAGACTAATCTGGCCA 450
||||||| |||||| || || ||||| || ||||||| | || ||||| || ||||||
Sbjct 66 CAACGAACGAGAGGT-GTTTAAGTTATCCATTGGTGCTGCT-TGCAGACTCATATGGCCA 123
Query 451 TTGGATCGCCTAATTGTTCAAGTTCTAGATGATTCCACTGATCAAACCATGAAGGGGCTG 510
|||||||| ||||| ||||||||| |||||||||||||||||| ||||| | || ||
Sbjct 124 TTGGATCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCACCATCATGGAAATG 183
Query 511 GTGAA-CACAGAGTGTGCAAAATGGGAAAGCAAAGGCGTAAATATAAAGTGTGAGAGGAG 569
|| || ||||||||||| |||||||| || ||||||| |||| ||||| |||||||||||
Sbjct 184 GT-AAGCACAGAGTGTGGAAAATGGGCAACCAAAGGCATAAACATAAAATGTGAGAGGAG 242
Query 570 AGACAACAGAAATGGCTATAAAGCCGGAGCTCTTAAACAAGGCATGAAGCACAATTACGT 629
|||||| |||||||||||||| || ||||||||||||||||| |||| ||| | ||||||
Sbjct 243 AGACAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTACGT 302
Query 630 -GAAGCTATGCAACTATGTTGTC-ATCTTTGACGCAGACTTTCAACCGGAGCCTGATTAC 687
|| | ||||| ||| ||| | ||||| || || || ||||| || ||||| || |||
Sbjct 303 CAAAAC-ATGCACCTACATTG-CAATCTTCGATGCTGATTTTCAGCCAGAGCCCGACTAC 360
Query 688 CTCCAACGCTCTGTCCCATTCCTCGTCCATAACCCCGAGGTCGCTCTTGTTCAAGCCCGT 747
||| ||||| |||||||||| || |||| || ||||| |||||||||||||||| ||
Sbjct 361 CTCGAACGCACTGTCCCATTTCTTATCCACAATCCCGAACTCGCTCTTGTTCAAGCTCGA 420
Query 748 TGGAGATTCATGAACGCAAACAAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCAAC 807
|||| ||| |||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct 421 TGGAAATTTGTGAACGCAAAGAAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCAAT 480
Query 808 TACCACTTCATGGCAGAACAAGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTCAAT 867
||||| |||| |||||| |||||||| |||||||||||||||||||||||| |||| |||
Sbjct 481 TACCATTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTTAAT 540
Query 868 GGAACTGCGGGTGTATGGAGAATGGCCGCGATGGAAGAAGCTGGAGGATGGCATGACCGG 927
|| |||||||||||||||||| |||| ||||||||||||||||| || ||| | ||||||
Sbjct 541 GGGACTGCGGGTGTATGGAGACTGGCGGCGATGGAAGAAGCTGGTGGTTGGAAAGACCGG 600
Query 928 ACCACTGTAGAGGACATGGACTTGGCCGTTCGTGCT-GGTCTTCTCGGCTGGAAATTTGT 986
||||| |||||||||||||||||||||||||||| | ||||| | |||||||||||||||
Sbjct 601 ACCACCGTAGAGGACATGGACTTGGCCGTTCGTG-TAGGTCTACACGGCTGGAAATTTGT 659
Query 987 CTTTCTCAATGACCTCACGGTGAAAAGCGAATTACCAAGCAAATTTAAGGCCTTCAGATT 1046
|||| |||| || | |||||||||| || |||||||| |||||||||| ||||||||
Sbjct 660 CTTTGTCAACGATGTTTCGGTGAAAAGTGAGCTACCAAGCCAATTTAAGGCATTCAGATT 719
Query 1047 CCAGCAACATCGATGGTCTTGTGGTCCAGCTAATCTCTTCAGGAAAATGATTATGGAGAT 1106
|||||||||||||||||| || |||||||||||||||||||| ||||||| |||||| ||
Sbjct 720 CCAGCAACATCGATGGTCATGCGGTCCAGCTAATCTCTTCAGAAAAATGACTATGGAAAT 779
Query 1107 TATTCGCAATAAGAGAGTGACGATTTGGAAGAAGTTGTATTTGGTCTACAGCTTCTTTTT 1166
||||||||||||||||||||||||||||||||| |||||| || |||| || ||||||||
Sbjct 780 TATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTGTATGTGATCTATAGTTTCTTTTT 839
Query 1167 CTTACGGAAGATCATCGTCCACTGCTTCACGTT-TTCGTTCTACTGCGTT-ATTCTTCCT 1224
| || |||||||||| ||||| | |||||| || ||| ||||| || || |||||||||
Sbjct 840 CGTAAGGAAGATCATAGTCCATTTCTTCACTTTCTTC-TTCTATTGT-TTCATTCTTCCT 897
Query 1225 ACAAGTGTCTTCTTCCCCGAAGTCAACATTCC-AGCTTGGTCAACTTTTTACATTCCGTC 1283
|| || || ||||| ||||||||||||||||| | |||||||||| |||| |||| |
Sbjct 898 ACGAGCGTATTCTTTCCCGAAGTCAACATTCCGA-CTTGGTCAACCGTTTATTTTCCTTT 956
Query 1284 TATGATCACTCTCTGCA-TCGTCATTGCGACACCAAGATCATTCTACTTCGTGATATTTT 1342
|||||||||||| | || | | |||||| ||||||||||| |||||| ||||||| ||||
Sbjct 957 TATGATCACTCTATTCAAT-GCCATTGCCACACCAAGATCTTTCTACCTCGTGATTTTTT 1015
Query 1343 GGATCTTGTTTGAAAACGTAATGTCTATGCACCGGACGAAGGGAACTTTCATCGGCATAC 1402
|| |||| || || || |||||| ||||||| ||||| || || ||||||||||| |||
Sbjct 1016 GGGTCTTATTCGAGAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCATCGGTTTAC 1075
Query 1403 TCGAAAAACAAAGAGTTAACGAATGGGTTGTCACTGAGAAATTAGGAGATGCTCTTAAGA 1462
| ||| | ||||||||||||||||| ||||| ||||||||||| ||||| ||| |||
Sbjct 1076 TTGAAGGAGGGAGAGTTAACGAATGGGTCGTCACCGAGAAATTAGGTGATGCGCTTGAGA 1135
Query 1463 CTAAGCTACTTCCTCGGATTG-GAAAACCTAGTAACGGGTTTCTTGAAAG-AGTAAACTC 1520
||||| ||||||| | | | |||||||| | ||||||||||| ||||| | |||||||
Sbjct 1136 CTAAGTTACTTCCCCA-AGTAAGAAAACCTCGCAACGGGTTTCTCGAAAGGA-TAAACTC 1193
Query 1521 CAAGGAGGTAATGGTGGGGATATACATCTTGTGTTGTGCTTGC-TATGGACTTT-TCTTT 1578
|| ||| | ||||||||||||||||| ||||| ||||| | | ||| || || |||||
Sbjct 1194 AAAAGAGATGATGGTGGGGATATACATATTGTGCTGTGCAT-CATATA-ACCTTGTCTTT 1251
Query 1579 GGGAACACATTGTTATATCTCTATCTCTT-CATGCAAGCGGTTGCTTTTCTCGTAT--CC 1635
||||| ||| |||||||| ||||||| || |||||| || |||||||| | ||| ||
Sbjct 1252 GGGAAGACAGTGTTATATATCTATCT-TTACATGCAGGCTCTTGCTTTTAT--TATTGCC 1308
Query 1636 GGAGTTGGCTTTGTCGGCACTT 1657
||| |||| ||| | || ||||
Sbjct 1309 GGAATTGGTTTTATAGGAACTT 1330
> AT4G16590.1 | Symbols: ATCSLA01, CSLA01, ATCSLA1 | cellulose
synthase-like A01 | chr4:9345150-9349221 FORWARD LENGTH=1907
Length=1907
Score = 806 bits (436), Expect = 0.0
Identities = 1167/1512 (77%), Gaps = 81/1512 (5%)
Strand=Plus/Plus
Query 188 TTCCC-TTATTCAAGTGTTTGGTGGCTCTTTGTTTGATGATCTCCCTCT-TAGTTTTCAT 245
||||| || |||||| ||||||||| | | |||||| | | ||| | | |||| ||| |
Sbjct 255 TTCCCGTT-TTCAAGGGTTTGGTGGTTATGTGTTTGGTTCTATCCAT-TATAGTGTTCTT 312
Query 246 AGAGGGTATATACATGAACCTTGTAG-TACTCTAT-GTCAAGTTGTTTAACCGAAAACCG 303
||| || | ||||||||| |||| | |||||| | |||||||| ||||| || |||||
Sbjct 313 CGAGAGTTTTTACATGAACTTTGT-GATACTCT-TCGTCAAGTTATTTAAACGTAAACCC 370
Query 304 GAAAAAATCTACAAATGGGA-GCCGATGCCGGAGGACATTGAGCTCGGACATGA-AACCT 361
| ||| | ||||||||||| ||| |||| || || ||||| | |||| || || ||
Sbjct 371 CATAAAGTGTACAAATGGGAGGCC-ATGCAAGAAGATGTTGAGGTTGGACCCGATAA-CT 428
Query 362 ACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGTCCTTC-AATTATCT 420
|||| ||||| ||| | ||||| ||||||||||| ||||||||||| | | | ||| |
Sbjct 429 ACCCAATGGTTCTTATCCAAATACCAATGTACAATGAAAAAGAGGT-ATACGCA-TATAT 486
Query 421 ATAGGT-GCTGTATGTAGACTA-A-TC--TGGCCAT-TGGATCG-CCTAATTGTTCAAGT 473
||| | || ||| || | || | || | || ||| | | || | ||||||||
Sbjct 487 ATA-CTACCTTTAT-TA-ATTACACTCTTTTATTATATGG-TTGATTTAGTAGTTCAAGT 542
Query 474 TCTAGATGATTCCACTGATCAAACCATGAAGGG--GCTGGTGAACACAGAG-TGTGCAAA 530
| |||||||||| || |||| || | ||||| | | ||| || |||| | ||||||
Sbjct 543 TGTAGATGATTCTACGGATCCGGCCGT-AAGGGAAGGT-GTGGACGTAGAGAT-TGCAAA 599
Query 531 ATGGGAAAGCAAAGGCGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAA 590
|||| ||||| ||||| |||| |||| |||||| |||||||| ||||| || ||||| ||
Sbjct 600 ATGGCAAAGCCAAGGCATAAACATAAGGTGTGAAAGGAGAGATAACAGGAACGGCTACAA 659
Query 591 AGCCGGAGCTCTTAAACAAGGC-ATGAAGCACAATTACGTGAAGCTATGCAACTAT-GTT 648
|||||||||| | ||| || || | | ||| | ||||| |||| |||| ||| | ||
Sbjct 660 AGCCGGAGCTATGAAAGAA-GCTCTTACGCAGAGCTACGTCAAGCAATGCGACT-TCGTA 717
Query 649 GTCA-TCTTTGACGCAGACTTT-CAACCGGAGCCTGATTACCTCCA-ACGCTCTGTCCCA 705
| || |||| || || || ||| ||||| ||||| ||||| || || ||| |||||||
Sbjct 718 G-CAGTCTTCGATGCTGA-TTTCCAACCCGAGCCCGATTATCT-CATCCGCGCTGTCCCT 774
Query 706 TTCCTCGTCCATAACCCCGAGGTCGCTCTTGTTCAAGCCCGTTGGAGATTCATGAACGCA 765
||||| ||||| ||||| || || ||||| ||||||||||| |||| ||| | |||||
Sbjct 775 TTCCTTGTCCACAACCCTGACGTTGCTCTAGTTCAAGCCCGATGGATATTTGTTAACGCG 834
Query 766 AACAAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCAGAA 825
||||| ||||||||||||||||||||||||||||| |||||||| || |||| | |||
Sbjct 835 AACAAATGCTTGATGACGAGGATGCAAGAGATGTCTCTCAACTATCATTTCAAAGTGGAA 894
Query 826 CAAGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGG 885
|||||||| || || ||||||||||| ||||| | || |||||||| ||||||||||||
Sbjct 895 CAAGAATCAGGGTCGACTAGACATGCTTTCTTCGGGTTTAATGGAACCGCGGGTGTATGG 954
Query 886 AGAATGGCCGCGATGGAAGAAGCTGGAGGATGGCA-TGACCGGACCACTGTAGAGGACAT 944
||||| | || ||||||| ||| ||||||||| | | | ||||||| |||||||||||
Sbjct 955 AGAATATCGGCAATGGAAGCAGCAGGAGGATGGAAATCAA-GGACCACAGTAGAGGACAT 1013
Query 945 GGACTTGGCCGTTCGTGCTGGTCTTC-TCGGCTGGAAATTTGTCTTTCTCAATGACCTCA 1003
||||||||| ||||||| |||||||| | |||||||||||||||| || || |||||||
Sbjct 1014 GGACTTGGCTGTTCGTGTTGGTCTTCAT-GGCTGGAAATTTGTCTACCTTAACGACCTCA 1072
Query 1004 CGGTGA-AAAGCGAA-TTACCAAGCAAATTTAAGGCCTTCAGATTCCAGCAACATCGATG 1061
|||||| ||| ||| || ||||||||||||||||||| |||||||||||||||| | ||
Sbjct 1073 CGGTGAGAAA-CGAGCTT-CCAAGCAAATTTAAGGCCTACAGATTCCAGCAACATAGGTG 1130
Query 1062 GTCTTGTGGTCCAGCTAATCTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAG 1121
||| ||||| || || ||||| || || ||||||| |||||||| ||| |||||||||
Sbjct 1131 GTCCTGTGGACCGGCGAATCTATTTAGAAAAATGACGATGGAGATCATTTTCAATAAGAG 1190
Query 1122 AGTGA-CGATTTGGAAGAAGTTGTATTTGGTCTACAGCTTCTTT-TTCTTACGGAA-GAT 1178
||| | | |||||||||||||| ||| || |||||||||| ||| ||| || |||| | |
Sbjct 1191 AGT-ATCAATTTGGAAGAAGTTTTATGTGATCTACAGCTT-TTTCTTCGTAAGGAAAG-T 1247
Query 1179 CATCG-TCCACTGCTTCACGTT-TTCGTTCTACTGCGTTATTCTTCCTACAAGTGTCTTC 1236
|| | |||| ||| || || ||| |||||||| | ||| | || ||||||||||||
Sbjct 1248 GG-CGGTACACTTCTTGACATTCTTC-TTCTACTGTATAATTGTGCCAACAAGTGTCTTC 1305
Query 1237 TTCCCCGAAGTCAACATTCCAGCTTGGTCAACTTTTTACATTCCGTCTATGATCACTCTC 1296
||||| ||| || |||| ||| ||||||| || ||||| |||| ||| |||||| | ||
Sbjct 1306 TTCCCTGAAATCCACATCCCATCTTGGTCTACCATTTACGTTCCCTCTTTGATCAGTATC 1365
Query 1297 TGC-ATCGTCATTGCGACACCAAGATCATTCTACTTCGTGATATTTTGGATCTTGTTTGA 1355
| | | | | | || || |||||||| |||||| |||||||||||||| ||||||| ||
Sbjct 1366 TTCCA-CACCCTGGCAACTCCAAGATCCTTCTACCTCGTGATATTTTGGGTCTTGTTCGA 1424
Query 1356 AAACGTAATGTCTATGCACCGGACGAAGGGAACTTTCATCGGCATACTCGAAAAACAAAG 1415
|| |||||| ||||||| || || || || || | ||| ||| |||| ||| | |||
Sbjct 1425 GAATGTAATGGCTATGCATCGAACCAAAGGTACGTGCATTGGCCTACTTGAAGGAGGAAG 1484
Query 1416 AGTTAACGAATGGGTTGTCACTGAGAAATTAGGAGATGCTCTT-AAGACTAAGCTACT-T 1473
||| |||||||||||||| || || ||| ||||||||||| || |||| ||||||||| |
Sbjct 1485 AGTAAACGAATGGGTTGTGACCGAAAAACTAGGAGATGCT-TTGAAGAGTAAGCTACTCT 1543
Query 1474 CCTCGGATTGGA-AAACCTAGTAACGGGTT-TCTTGAAAGAGTAAACTCCAAGGAGGTAA 1531
| |||| | | ||| | | | ||| || ||||||| || |||||||| || |
Sbjct 1544 C-TCGGGTAGTCCAAAGAAAAT--CTTGTTATC---AAAGAGTGAATTCCAAGGAAGTGA 1597
Query 1532 TGGTGGGGATATACATCTT-GTGTTGTGCT-TGCTATGGACTTTTCTTTGGGAACACATT 1589
|||||||| ||||||| || | | ||||| | |||||| || ||| |||| ||||||
Sbjct 1598 TGGTGGGGGTATACATATTAG-GATGTGCACT-CTATGGCCTGATCTATGGGCACACATG 1655
Query 1590 GTTATATCTCTATCTCTT-CATGCAAGCGGTTGC-TTTTCTCGTATCCGGAGTTGGCTTT 1647
|||| || ||||||| || | | || || || |||| |||| ||||| |||| |||
Sbjct 1656 GTTACATTTCTATCTTTTTCTT-CAGGCCACAGCCTTTT-TCGTCTCCGGTTTTGGTTTT 1713
Query 1648 GTCGGCACTTAA 1659
||||| || |||
Sbjct 1714 GTCGGAACCTAA 1725
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81977489985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5