BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313260
Length=2286
Score E
Sequences producing significant alignments: (Bits) Value
AT1G24150.1 | Symbols: ATFH4, FH4 | formin homologue 4 | chr1:8... 2244 0.0
AT1G70140.1 | Symbols: ATFH8, FH8 | formin 8 | chr1:26412688-26... 953 0.0
> AT1G24150.1 | Symbols: ATFH4, FH4 | formin homologue 4 | chr1:8549518-8551993
FORWARD LENGTH=2261
Length=2261
Score = 2244 bits (1215), Expect = 0.0
Identities = 1415/1509 (94%), Gaps = 23/1509 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGCCATGTTGATGCAGCCATGGCCACCGTTTCTTCCTCATCTAACCCTAATTTTC 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 ATGGCTGCCATGTTGATGCAGCCATGGCCACCGTTTCTTCCTCATCTAACCCTAGTTTTC 60
Query 61 TTATCCCTAATCCTCTTTTTCCCTAATCAATCATTTTCTCAATCCGATTCTCCTCGAAAC 120
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 TTAACCCTAATCCTCTTTTTCCCTAATCAATCCTTTTCTCAATCCGATTCTCCTCGAAAC 120
Query 121 ATCGAAACATTTTTCCCAAATGACACAATCACCGCTCCAGTTCCACCTCCGGTTCTATCA 180
||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||
Sbjct 121 ATCGAAACATTTTTCCCAAATGACACAATCACCCCTCCAGTTCAATCTCCGGTTCTATCG 180
Query 181 CCGCCGGAAAACCCACCATCTTC-T--TC--A-TCGGACAGAGGAAAGATCTTGAGGGCT 234
|||||| |||||||| ||||||| | || | || ||||||||||| ||||||||||||
Sbjct 181 CCGCCGCAAAACCCATCATCTTCGTCATCGGATTCAGACAGAGGAAATATCTTGAGGGCT 240
Query 235 GTGCTTATAACAGCAGCAAGCACTTTACTTGTAGCAGCCGTGTTCTTCTTCCTCGTCCAT 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GTGCTTATAACAGCAGCAAGCACTTTACTTGTAGCAGCCGTGTTCTTCTTCCTCGTCCAT 300
Query 295 AAGTGGCGGCGAAGGAGAAACAGAGTCGGCGGTTTTGAGAACACCCTCCCACCACCGGTT 354
|| || |||| ||||||||||||||||| || |||| |||||||| | ||||||||||
Sbjct 301 AAATGTAGGCGGAGGAGAAACAGAGTCGGTGGCGTTGACAACACCCTTCAACCACCGGTT 360
Query 355 CCTCCGTTAGCGGAAGCGGCTTTAGCTCGCGAAGGGTTCACTAGATTCGGCGGAAACGTA 414
|||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct 361 CCTCCGTTGGCGGAAGCGGCTTTAGCTCGTGAAGGGTTTACTCGATTCGGCGGAAACGTA 420
Query 415 AAGGGTTTGATCCTTGATGAGAATGGTCTCGATGTGTTGTATTGGAGAAAGTT---ACAG 471
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 421 AAGGGTTTGATTCTAGATGAGAATGGTCTCGATGTGTTGTATTGGAGAAAGTTACAACAG 480
Query 472 AGTCAGAGAGACAATAAAAGTGGAAGCTTTAAGAAAGAGATCGTTCACGGAGACGACGAA 531
||||| ||||| |||||| |||||||||||| |||||||||| | ||||||||||| |||
Sbjct 481 AGTCAAAGAGATAATAAAGGTGGAAGCTTTAGGAAAGAGATCATCCACGGAGACGATGAA 540
Query 532 GAGAAGAATGTGATTTACTCAAAGAATAAGAAGAAATCTGGACCGGTGACGGAGACTCCT 591
||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct 541 GAGAAGAATGTGATTTATTCGAAGAGTAAGAAGAAATCTGGACCGGTGACGGAGACTCCT 600
Query 592 CTTCTCAGAGGAAGATCATCGACTTCTCATAGTGTAATTCACAACGATAATGACCGAAAT 651
||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 601 CTTCTCAGAGGAAGATCTTCGACTTCTCATAGTGTAATTCACAACGACAATTACCGAAAT 660
Query 652 GCCACCACCACCACCACTCATCCTCCTCATGTCAAGACTGATTCTTTTGAATTCGTCAAA 711
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 G------CCACCACCACTCATCCTCCTCATGTCAAGACTGATTCTTTTGAATTCGTCAAA 714
Query 712 TCAGATCCGTCTCCGCCACCGCCACCTCCACCGCCAATTCCGGTGAAGCAGAGTGCAACA 771
||||||| |||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct 715 CCAGATCCAACTCCACCACCGCCTCCACCACCGCCAATTCCGGTGAAGCAGAGTGCAACA 774
Query 772 cctcctcctcctcctcctcctAAGCCTAAG---AATGGTCCATCTCCGCCGCCACCTCCA 828
|| || ||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 775 CCACCACCTCCTCCTCCTCCTAAGCTTAAGAATAATGGTCCATCTCCGCCGCCACCTCCA 834
Query 829 CCGTTGAAAAAGACAGCGGCTTTGTCATCATCGGTTTCGAAAAAACCACCGCCGGCTCCT 888
|||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||
Sbjct 835 CCGTTGAAAAAGACGGCGGCTTTGTCATCATCGGCTTCAAAAAAACCACCACCGGCTCCT 894
Query 889 AGAGGATCATCTTCAGGGGAAGGTTCAAATGGTCAGGTAAAGCTTAAGCCTTTACATTGG 948
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 895 AGAGGATCATCTTCAGGGGAAAGTTCAAATGGTCAGGTAAAGCTTAAGCCTTTACATTGG 954
Query 949 GATAAAGTCAATCCTGATTCTGATCATTCCATGGTTTGGGATAAAATCGATCGTGGCTCA 1008
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 955 GATAAAGTCAATCCTGATTCTGATCATTCCATGGTTTGGGACAAAATCGATCGTGGCTCT 1014
Query 1009 TTCAGTTTCGATGGCGATCTAATGGAGGCTCTCTTCGGCTACGTGGCGGTCGGAAAGAAA 1068
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1015 TTCAGTTTCGATGGCGATCTAATGGAGGCTCTGTTCGGCTACGTGGCGGTCGGAAAGAAA 1074
Query 1069 TCTCCAGACGACGGCGGTGATAAAAAGCCTAGCTCAGCTTCACCGACCCAGACTTTT-AT 1127
|||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||
Sbjct 1075 TCTCCAGACGACGGCGGTGATAAAAAGCCTAGCTCAGCCTCACCGGCCCAGA-TTTTCAT 1133
Query 1128 ACTTGACCCGAGAAAGTCTCAGAACACAGCAATTGTGCTCAAATCCTTAGGAATGACTCG 1187
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 ACTTGACCCGAGAAAGTCACAGAACACAGCAATTGTGCTCAAATCCTTAGGAATGACTCG 1193
Query 1188 TGACGAGCTTGTGGAATCGTTAATGGAAGGTCACGATTTTCATCCAGATACACTAGAGAG 1247
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1194 TGACGAGCTTGTGGAATCGTTAATGGAAGGTCATGATTTTCATCCAGATACACTAGAGAG 1253
Query 1248 GCTCTCTAGAATAGCTCCAACGAAAGAAGAACAATCAGCGATTCTCCAATTCGACGGTGA 1307
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 ACTCTCTAGAATAGCTCCAACGAAAGAAGAACAATCAGCGATTCTCCAATTCGACGGTGA 1313
Query 1308 CACGAAAATGCTCGCAGACGCTGAATCGTT-CTTGTTTCATCTTCTAAAGGCAGTGCCTT 1366
||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||
Sbjct 1314 TACGAAAATGCTCGCAGACGCTGAATCGTTTCT-GTTTCATCTTCTAAAGGCGGTGCCTT 1372
Query 1367 GTGCGTTCACTCGTCTTAACGCGTTACTCTTTAGAGCTAATTACTATCCAGAGATCTCAA 1426
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 GTGCGTTTACTCGTCTTAATGCGTTACTCTTTAGAGCTAATTACTATCCAGAGATCTCAA 1432
Query 1427 ACCATAACAAATCTCTCCAGACGTTGGACTTGGCTTGTACAGAGCTTAGATCACGTGGCT 1486
||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1433 ACCATAACAAAAATCTTCAGACGTTGGATTTGGCTTGTACAGAGCTTAGGTCACGTGGCT 1492
Query 1487 TGTTC-GTG 1494
||||| |||
Sbjct 1493 TGTTCAGTG 1501
Score = 1114 bits (603), Expect = 0.0
Identities = 655/681 (96%), Gaps = 0/681 (0%)
Strand=Plus/Plus
Query 1606 AGTGTTGATGGGAAGACGACTTTGCTTAACTTTGTGGTGGAAGAAGTGGTTAGATCAGAG 1665
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct 1498 AGTGTTGATGGGAAGACGACTTTGCTTAACTTTGTTGTGGAAGAAGTGGTTAGGTCTGAA 1557
Query 1666 GGGAAGCGATGCGTGCTTAACCGAAGGACTAACCGTAGCTTTAGCCGTAGCAGTAGCAGT 1725
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1558 GGGAAGCGATGCGTGCTTAACCGAAGGACTAACCGTAGCTTTAGCCGTAGTAGCAGCAGT 1617
Query 1726 ACGATCTCCGAGGTTATATCGAAGGAAGAACAAGAGAAGGAGTATCTTAGACTCGGTTTA 1785
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1618 TCGATCTCCGAGGTTATATCGAAGGAAGAACAAGAGAAAGAGTATCTTAGACTCGGTTTA 1677
Query 1786 CCTGTTGTTGGAGGGTTAAGTTCTGAGTTCACCAATGTTAAGAAAGCTGCAGCTATAGAC 1845
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1678 CCTGTTGTTGGAGGGTTAAGCTCTGAGTTCACCAATGTTAAGAAAGCTGCAGCTGTAGAC 1737
Query 1846 TATGACACAGTTGCTGCAACGTGCTTGGCTCTTGCGGCTAGAGCGAAAGACGCTAGACGA 1905
|||||||| |||||||||||||||||||||||| || ||||||||||||| |||||||||
Sbjct 1738 TATGACACTGTTGCTGCAACGTGCTTGGCTCTTACGTCTAGAGCGAAAGATGCTAGACGA 1797
Query 1906 GTGTTGGCGCAGAGCGAAGGAGATAACAAAGAAGGAGAGAGGTTTGTGAAGAAGATGAAT 1965
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1798 GTGTTAGCGCAGAGCGAAGGAGATAACAAAGAAGGAGTGAGGTTTGTGAAGAAGATGAAT 1857
Query 1966 GAGTTTCTTGATTCGGTTGAGGAAGAAGTGAAGTTAGCGAAACAAGAAGAGAAGAAAGTG 2025
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1858 GAGTTTCTTGATTCGGTTGAGGAAGAAGTGAAGTTAGCGAAAGAAGAAGAGAAGAAAGTG 1917
Query 2026 TTGGAGCTTGTGAAGAGAACAACAGAGTATTACCAAGCAGGAGCTGTGAAAGGAAAGAAT 2085
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1918 TTGGAGCTTGTGAAGAGAACAACAGAGTATTATCAAGCAGGAGCTGTGAAAGGAAAGAAT 1977
Query 2086 CCACTTCATTTGTTTGTTATTGTTAGAGATTTTCTTGCAATGGTGGATAAAGTTTGCGTA 2145
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1978 CCACTTCATTTGTTTGTTATTGTTAGAGATTTTCTTGCAATGGTTGATAAAGTTTGCGTA 2037
Query 2146 GAGATCGCAAGGAATTTGCAGAGGAGGGCATCGATGGGGAGTCCTCAGCAGAGGAATGCA 2205
||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||
Sbjct 2038 GAGATCGCAAGGAATTTGCAGAGGAGGTCATCAATGGGGAGTACTCAGCAGAGGAATGCG 2097
Query 2206 GTGAAGTTTCCGGTTTTGCCTCCGAATTTCATGTCGGATAGATCAAGAAGTGATTCTCGT 2265
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2098 GTTAAGTTTCCGGTTTTGCCTCCGAATTTCATGTCGGATAGATCAAGAAGTGATTCGGGT 2157
Query 2266 GGATCAGATTCCGATATGTGA 2286
|||||||||||||||||||||
Sbjct 2158 GGATCAGATTCCGATATGTGA 2178
> AT1G70140.1 | Symbols: ATFH8, FH8 | formin 8 | chr1:26412688-26415230
REVERSE LENGTH=2465
Length=2465
Score = 953 bits (516), Expect = 0.0
Identities = 1272/1622 (78%), Gaps = 112/1622 (7%)
Strand=Plus/Plus
Query 727 CCACCGCCACCTCCACCGCCAATTCCGGTGAAGCAGAGTGCAACAcctcc-tcctcctcc 785
||||| || || |||||| ||||| ||||||| ||||||||| || | || | | || ||
Sbjct 894 CCACCACCGCCACCACCGTCAATTGCGGTGAAACAGAGTGCACCAACGCCAT-CGCCACC 952
Query 786 tcctcctAAGCCTAAGAATGG----T--CCATCTCCGCCGCCACCTCCACCGTTGAAAAA 839
|||||| | |||||| || | ||||| || ||||||||||||||| |||||||
Sbjct 953 TCCTCC---GATTAAGAAGGGTTCTTCACCATCGCCACCGCCACCTCCACCGGTGAAAAA 1009
Query 840 GACAGCG-GCTTTGTCATCATCGGTTTCGAAAAAACCA-C--CGCCGGCTCCTAGAGGAT 895
| | | ||||| |||||||| | ||||||| |||| | |||||| | |||||||
Sbjct 1010 GGTTG-GAGCTTTATCATCATCAGCTTCGAAACCACCACCTGCGCCGG-T--TAGAGGAG 1065
Query 896 CATCTTCAGGGGAAG-GTTC-AAATGGTCAGGTAAAGCTT-AAGCCTTTACATTGGGATA 952
|| | ||| | || ||| ||| || |||||| || |||||||||||||||||||
Sbjct 1066 CAAGTGGAGGAG-AGACTTCGAAA----CAAGTAAAG-TTGAAGCCTTTACATTGGGATA 1119
Query 953 AAGTCAATCCTGATTCTGATCATTCCATGGTTTGGGATAAAATCGATCGTGGCTCATTCA 1012
|||| || |||||||| |||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 1120 AAGTAAACCCTGATTCCGATCATTCAATGGTTTGGGACAAAATCGATCGTGGATCATTCA 1179
Query 1013 GTTTCGATGGCGATCTAATGGAGGCTCTCTTCGGCTACGTGGCGGTCGGAAAGAAATCTC 1072
|||||||||||||| ||||||| ||||| || || ||||| || || || |||||||| |
Sbjct 1180 GTTTCGATGGCGATTTAATGGAAGCTCTGTTTGGATACGTTGCCGTGGGGAAGAAATCAC 1239
Query 1073 CAG-ACGACGGCGGTGATAAAAAGCCTAGCTCAGCTTCACCGACCCAGACT-TTTATACT 1130
||| || | |||| ||| ||||| || || | ||| || || | | || |||||
Sbjct 1240 CAGAAC-AAGGCGATGAGAAAAA-CC---CT-A-AATCA---ACGCA-AATATTCATACT 1288
Query 1131 TGACCCGAGAAAGTCTCAGAACACAGCAATTGTGCTCAAATCCTTAGGAATGACTCGTGA 1190
||| |||||||||||||| |||||||| |||||||||||||| ||||| ||||| |||||
Sbjct 1289 TGATCCGAGAAAGTCTCAAAACACAGCGATTGTGCTCAAATCATTAGGTATGACACGTGA 1348
Query 1191 CGAGCTTGTGGAATCGTTAATGGAAGGTCACGATTTTCAT-CCAGATACACTAGAGAGGC 1249
|||||||| ||||| | || ||||| |||| |||| | ||||| || || ||||||
Sbjct 1349 AGAGCTTGTTGAATCACTCATAGAAGGAAACGA-TTTCGTGCCAGACACTCTTGAGAGGT 1407
Query 1250 TCTCTAGAATAGCTCCAACGAAAGAAGAACAATCAGCGATTCTCCAATTCGACGGTGACA 1309
| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1408 TAGCTAGAATAGCTCCAACGAAAGAAGAACAATCAGCCATTCTTGAATTCGACGGTGACA 1467
Query 1310 CGA-AAATGCTCGCAGACGCTGA-ATCGTT-CTTGTTTCATCTTCT-AAAGGCAGTGCCT 1365
|| ||| ||| || || || || | |||| || |||||||||||| ||| | |||||
Sbjct 1468 CGGCAAA-GCTTGCTGATGCGGAGA-CGTTTCT-GTTTCATCTTCTTAAATCC-GTGCCA 1523
Query 1366 TGTGCGTTCACTCGTCTTAACGCGTTACTCTTTAGAGCTAATTACTATCCAGAGAT--CT 1423
||||| || | || |||||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1524 ACCGCGTTTACGAGACTAAACGCGTTTCTCTTTAGGGCTAATTATTATCCAGAGATGGCT 1583
Query 1424 CAAACCATAACAAATCTCTCCAGACGTTGGACTTGGCTTGTACAGAGCTTAGATCACGTG 1483
|| | ||| ||||| | | || |||||||| || ||||||| |||||| ||||| ||||
Sbjct 1584 CAT-C-ATAGCAAATGTTTACAAACGTTGGATTTAGCTTGTAAAGAGCTGAGATCTCGTG 1641
Query 1484 GCTTGTTCGTGAAGCTATTGGAAGCGATTCTGAAATCTGGAAACAGAATGAATGCAGGAA 1543
||||||| |||||||| ||||| || || || ||| |||||||||||||||| || || |
Sbjct 1642 GCTTGTTTGTGAAGCTTTTGGAGGCAATACTTAAAGCTGGAAACAGAATGAACGCGGGTA 1701
Query 1544 CAACTAGAGGAGATGCTCAAGCTTTTAATCTCACCGCGCTTTTGAAGCTTTCCGATGTGA 1603
| | |||||| | |||||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct 1702 CCGCGAGAGGAAACGCTCAAGCGTTTAATCTAACCGCGCTTTTGAAGCTTTCGGATGTTA 1761
Query 1604 AGAGTGTTGATGGGAAGACGACTTTGCTTAACTTTGTGGTGGAAGAAGTGGTTAGATCAG 1663
| || |||||||||||||| |||||||||||||||| ||||| ||||| |||||||| |
Sbjct 1762 AAAGCGTTGATGGGAAGACTTCTTTGCTTAACTTTGTAGTGGAGGAAGTTGTTAGATCGG 1821
Query 1664 AGGGGAAGCGATGCGTGCTTAACCGAAG--G--A---CT-AAC-CGTAGCTTTAGCCGTA 1714
| || || || || || | || |||| | | || ||| || ||| ||| |||
Sbjct 1822 AAGGAAAACGTTGTGTTATGAATAGAAGAAGCCATAGCTTAACACGAAGCGGTAGTAGTA 1881
Query 1715 GC-A----G-TAGCAGTACG-A-TCTCCGAGGTTATATCGAAGGAAGAACAAGAGAAGGA 1766
| | | | | | || | | ||| | ||||||| ||||| ||||| |||||||| ||
Sbjct 1882 ACTACAATGGTGGTAATA-GTAGTCTTC-AGGTTATGTCGAAAGAAGAGCAAGAGAAAGA 1939
Query 1767 GTATCTT-A-GACTCGGTTTACCTGTTGTTGGAGGGTTAAGTTCTGAGTTCACCAATGTT 1824
||| ||| | | || |||||||| |||||||| || || || |||||||| | || ||
Sbjct 1940 GTA-CTTGAAG-CTTGGTTTACCAGTTGTTGGTGGATTGAGCTCTGAGTTTTCAAACGTG 1997
Query 1825 AAGAAAGCTGCA-GCTATAGACTATGACACAGTTGCTGCAACGTGCT-TGGCTCTTGCGG 1882
||||||||||| | | | |||||||| || |||| |||||| || | || |||||||||
Sbjct 1998 AAGAAAGCTGCTTG-TGTGGACTATGAAACGGTTGTTGCAACTTGTTCTG-CTCTTGCGG 2055
Query 1883 CTAGAGCGAAAGACGCTAGA-CGAGTG-TTGGCGCAGAGCGAAGGAGATAACAAAGAAGG 1940
|||||||||||| || | | || ||| |||| | | | |||| | | | |||||
Sbjct 2056 TTAGAGCGAAAGATGCGAAAACG-GTGATTGGAGAAT-GTGAAG-A--TGG-A--GAAGG 2107
Query 1941 AGAGAGGTTTGTGAAGAA-GATGAATGA-GTTTCTTGATTCGGTTGAGGAAGAAGTGAAG 1998
|| |||||||||||| || ||||| ||| ||||||||||||||| |||||||| |||||
Sbjct 2108 AGGGAGGTTTGTGAA-AACGATGA-TGACGTTTCTTGATTCGGTAGAGGAAGAGGTGAAA 2165
Query 1999 TTAGCGAAACAAGAAGAGAAGAAAGTGTTGGAGCTTGTGAAGA-GAACAACAGAGTATTA 2057
|||||||| ||||||| ||||||| ||||||||||||| | | ||||| || |||||
Sbjct 2166 ATAGCGAAAGGTGAAGAGAGGAAAGTGATGGAGCTTGTGAA-ACGTACAACGGATTATTA 2224
Query 2058 CCAAGCAGGAGCTGTGA-AA-GGA-AAGAATCCACTTCATTTGTTTGTTATTGTTAGAGA 2114
|||||||||||||| | || || |||||||||||||||||||||||||| ||||||||
Sbjct 2225 TCAAGCAGGAGCTGTTACAAAGGGGAAGAATCCACTTCATTTGTTTGTTATCGTTAGAGA 2284
Query 2115 TTTTCTTGCAATGGTGGATAAAGTTTGCGTAGAGATCGCAAGGAATTTGCAGAGGAGG-- 2172
||||||||| ||||| |||||||||||| |||| || || ||| |||||||||||
Sbjct 2285 TTTTCTTGCCATGGTTGATAAAGTTTGCTTAGATATTATGAGAAATATGCAGAGGAGGAA 2344
Query 2173 GCATCG-A-TGGGG-A--GTC--CT-CAGCAGAGGAATGCAGTGAAGTTTCCGGTTTTGC 2224
| | | | | | | | | || | |||| ||||||| ||||| || ||||||||||
Sbjct 2345 GGTTGGTAGTCCGATATCGCCTTCTTC-GCAGCGGAATGCGGTGAAATTCCCGGTTTTGC 2403
Query 2225 CTCCGAATTTCATGTCGGATAGATCAAGAAGTGATTCTCGTGGATCAGATTCCGATATGT 2284
||||||||||||||||||| ||| | | ||||||||| |||| || ||||| |||||||
Sbjct 2404 CTCCGAATTTCATGTCGGACAGAGCTTGGAGTGATTCTGGTGGGTCGGATTCTGATATGT 2463
Query 2285 GA 2286
||
Sbjct 2464 GA 2465
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113453231700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5