BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg313310 Length=1434 Score E Sequences producing significant alignments: (Bits) Value AT1G26799.1 | Symbols: | Plant self-incompatibility protein S1... 765 0.0 AT1G26795.1 | Symbols: | Plant self-incompatibility protein S1... 553 2e-156 AT1G26796.1 | Symbols: | Plant self-incompatibility protein S1... 442 4e-123 AT1G26798.1 | Symbols: | Plant self-incompatibility protein S1... 405 6e-112 AT1G26797.1 | Symbols: | Plant self-incompatibility protein S1... 372 6e-102 > AT1G26799.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:9283873-9284438 FORWARD LENGTH=566 Length=566 Score = 765 bits (414), Expect = 0.0 Identities = 470/497 (95%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 939 CAAAGAAAAATATTGTGTCACAAAACCTTTAAACCCTTCCATGGCTTCCTCAACAAATAA 998 ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 14 CAAGGAAAAATATTGTGTCAC-AAACCAGTAAACCCTTCCATGGCTTCCTCAACAAATAA 72 Query 999 CCACTTCACTTTCC-TGCTTCTCTCATTTTTATTTATCCCaaaaaaaTCGTCATCTTTGG 1057 ||||||||| |||| |||||||||||||||||||||||| |||||| | ||||||||||| Sbjct 73 CCACTTCAC-TTCCGTGCTTCTCTCATTTTTATTTATCCTAAAAAAGTTGTCATCTTTGG 131 Query 1058 GAAATCATTCGTCCATCGATGGAATTTTACTGTTTTCACCTAAACATGTCGTGATCTACA 1117 ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||| Sbjct 132 GAAATCATTCGTCCAACGATGGAATTTTGCTATTTTCACCTAAACATGTCGTGATCTACA 191 Query 1118 ACACATTGACCACACGTGCAACATTGGTCGTACATTGCATGAATAAAGAGAAAGATTTGG 1177 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 192 ACACATTGACCTCACGTGCAACATTGGTCGTACATTGTGTGAATAAAGAGAAAGATTTGG 251 Query 1178 GGATAAAAAAGCTCCCAATTGGAGCTAGTTTTGATTTCAGGTTTCATGTCAATTTTCGTA 1237 ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||| Sbjct 252 GGATACAAAAGCTCCCAATCGGAGCTAGTTTCGATTTCAGGTTTCGTGTCAATCTTCGTA 311 Query 1238 AAACAACAACGTATAATTGCACTTTCGAGTGGCCCGGAAGTAAAGAGAAATTTGATATTT 1297 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 312 AAACAACAACGTATAATTGCACTTTCGAGTGGCCCGGAAGTATAGAGAAATTTGATATTT 371 Query 1298 TTAGGGCAGACAGAGACGACAGTGCAACAAGTCCTATTGGGGTCTGTAGAGAATGTATAT 1357 ||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||| Sbjct 372 TTAGGGCAGACAGAGACGACAATGAAACAAGTCCTATTGGGATATGTAGAGAATGTATAT 431 Query 1358 GGTACATTTATGAACCAGCCCCTTGTCGTGAAAAACGTGACGGAGGCCATTCTATATGCT 1417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 GGTACATTTATGAACCAGCCCCTTGTCGTGAAAAACGTGACGGAGGCCATTCTATATGCT 491 Query 1418 TTTCATGGGATCCATAG 1434 || ||||||||| |||| Sbjct 492 TTACATGGGATCGATAG 508 > AT1G26795.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:9276381-9276954 FORWARD LENGTH=574 Length=574 Score = 553 bits (299), Expect = 2e-156 Identities = 359/388 (93%), Gaps = 3/388 (1%) Strand=Plus/Plus Query 1 ATGGCTTCCTCAACAAATCAATTTTTTATTTTCGTGCTATTCTTATTTCTCTTTGTCCTC 60 ||||||| |||||| |||||| ||||||||| || ||||||||||| ||||| ||||| Sbjct 39 ATGGCTTTCTCAACCAATCAAAATTTTATTTTTGTATTATTCTTATTTTTCTTTATCCTC 98 Query 61 AAAACGTCGGCATCATTAGCATATCACTCGTCCCCCGATGGACTTTTACCATTCTCATC- 119 |||||||| ||||||||| || ||||||||||||||||||| |||||||||||| || | Sbjct 99 AAAACGTCAGCATCATTAACAAATCACTCGTCCCCCGATGGGCTTTTACCATTCGCA-CG 157 Query 120 TAAACATGTAATCATCATCAACAAATTGGTCACACGTGCAACGTTGATTGTACATTGTAC 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 TAAACATGTTATCATCATCAACAAATTGGTCACACGTGCAACGTTGATTGTACATTGTAC 217 Query 180 AAACAAAGGAGATGATTTAGGGGTAATAAGACTCAACCCTCTAGATAGTTTTGATTTCAG 239 |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 218 TAACAAAGGGGAAGATTTAGGGGTAATAAGACTCAACCCTCTAGATCGTTTTGATTTCAG 277 Query 240 GTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCAGTTTCGAGTGGCCAGGCAA 299 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 278 GTTTCGTGTCAATCTCCGTAAAACAACAACATACACTTGCAGTTTCGAGTGGCCCGGCAA 337 Query 300 TACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGATAATCCAAAAAGTAAATATGG 359 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct 338 TACAGCTACGTTTGATATTTTTAGAGCTGATAGAGACGATAATCCAAGCGGTAAATATGG 397 Query 360 AGTTTGCAGCGAATGTATTTGGAG-ATT 386 |||||||||||||||||| ||||| ||| Sbjct 398 AGTTTGCAGCGAATGTATATGGAGTATT 425 Score = 353 bits (191), Expect = 2e-96 Identities = 228/245 (93%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 388 TTT-CCCTTCGCATC-TAAACATGTTATCATCATCAACAAATTGGTCACACTTGCAACGT 445 ||| || |||||| | ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 143 TTTACCATTCGCA-CGTAAACATGTTATCATCATCAACAAATTGGTCACACGTGCAACGT 201 Query 446 TGATTGTGCATTGTAGGAACAAAGGGGACGATTTAGGGGTAATAAGCCTCCAA-CATTTA 504 ||||||| ||||||| ||||||||||| ||||||||||||||||| || ||| | | || Sbjct 202 TGATTGTACATTGTACTAACAAAGGGGAAGATTTAGGGGTAATAAGACT-CAACCCTCTA 260 Query 505 GCTCGTTTTGATTTCAGGTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCAGT 564 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 261 GATCGTTTTGATTTCAGGTTTCGTGTCAATCTCCGTAAAACAACAACATACACTTGCAGT 320 Query 565 TTCGAGTGGCCCGGCAATACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGATAAT 624 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 321 TTCGAGTGGCCCGGCAATACAGCTACGTTTGATATTTTTAGAGCTGATAGAGACGATAAT 380 Query 625 CCAAG 629 ||||| Sbjct 381 CCAAG 385 > AT1G26796.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:9278953-9279482 FORWARD LENGTH=530 Length=530 Score = 442 bits (239), Expect = 4e-123 Identities = 341/390 (87%), Gaps = 7/390 (2%) Strand=Plus/Plus Query 1 ATGGCTTCCTCAA-CAAATCAATTTTTTATTTTCGTGCT-ATTCTTATTTCTCTTTGTCC 58 |||||||| |||| | |||||| ||| |||||| || | ||| || |||||| ||||| Sbjct 6 ATGGCTTCTTCAAGC-AATCAAAATTTCATTTTCTTGTTAATT-TTCTTTCTCGCTGTCC 63 Query 59 TCAAAACGTCGGCATCATTAGCATATCACTCGTCCCCCGATGGACTTTTACCATTCTCAT 118 |||||| ||| ||||||| | | || | |||||| |||| ||| | |||| ||||||| Sbjct 64 ACAAAACATCGTCATCATTTGGAAATTATTCGTCCACCGAAGGAGTCTTACTATTCTCAC 123 Query 119 CTAAACATGTAATCATCATCAACAAATTGGTCACACGTGCAACGTTGATTGTACATTGTA 178 |||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 124 CTAAACATGTTATCATCATCAACAAATTGGTCACACTTGCAACGTTGATTGTGCATTGTA 183 Query 179 CAAACAAAGGAGATGATTTAGGGGTAATAAGACT-CAACCCTCTAGATAGTTTTGATTTC 237 |||||||| || ||||||||||||||||| || ||| | | ||| | ||||| ||||| Sbjct 184 GGAACAAAGGGGACGATTTAGGGGTAATAAGCCTCCAA-CATTTAGCTCGTTTTCATTTC 242 Query 238 AGGTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCAGTTTCGAGTGGCCAGGC 297 |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||| Sbjct 243 AGGTTTCGCGTCAATCTTCGTAAAACAACAAAGTACACTTGCAGTTTCGAGTGGCCCGGC 302 Query 298 AATACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGATAATCCAAAAAGTAAATAT 357 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct 303 AATACAGCTACGTTTGATATTTTTAGAGCTGATAGAGACGATAATCCAAGAAGTAAATAT 362 Query 358 GGAGTTTGCAGCGAATGTATTTGGAG-ATT 386 |||||||||||||||||||||||||| ||| Sbjct 363 GGAGTTTGCAGCGAATGTATTTGGAGTATT 392 Score = 399 bits (216), Expect = 3e-110 Identities = 230/237 (97%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 394 TTCGCATCTAAACATGTTATCATCATCAACAAATTGGTCACACTTGCAACGTTGATTGTG 453 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 TTCTCACCTAAACATGTTATCATCATCAACAAATTGGTCACACTTGCAACGTTGATTGTG 176 Query 454 CATTGTAGGAACAAAGGGGACGATTTAGGGGTAATAAGCCTCCAACATTTAGCTCGTTTT 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 CATTGTAGGAACAAAGGGGACGATTTAGGGGTAATAAGCCTCCAACATTTAGCTCGTTTT 236 Query 514 GATTTCAGGTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCAGTTTCGAGTGG 573 ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 237 CATTTCAGGTTTCGCGTCAATCTTCGTAAAACAACAAAGTACACTTGCAGTTTCGAGTGG 296 Query 574 CCCGGCAATACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGATAATCCAAGA 630 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 297 CCCGGCAATACAGCTACGTTTGATATTTTTAGAGCTGATAGAGACGATAATCCAAGA 353 > AT1G26798.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:9281791-9282341 FORWARD LENGTH=551 Length=551 Score = 405 bits (219), Expect = 6e-112 Identities = 283/313 (90%), Gaps = 8/313 (3%) Strand=Plus/Plus Query 630 AGCGTTTGGAAACTTTTTATCTGTCGATGGAGGT-TTCCCGTTCT-CACCTAAACATGTT 687 |||||||| ||||| | ||||||||||| | | || ||||| | |||||||||||||| Sbjct 81 AGCGTTTGAAAACTATACATCTGTCGATGTTGATCTT-CCGTT-TGCACCTAAACATGTT 138 Query 688 GTAATCATCAACACATTGAACTCACATGAAATATTGGTCGTGCACTGTAGGAATAAAGGG 747 |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 139 ATAATCATCAACACATTGAACCCACATGAAAGATTGGTCGTGCACTGTAGGAATAAAGGG 198 Query 748 AAAGAT-TTGGGGTTTCGTGCGCTCCAATCC-CAAGAACAAATAGATTTTAGGTTTCATG 805 |||||| | |||| ||| |||| | || || ||||||||||||||||| ||||||| | Sbjct 199 AAAGATCTAGGGG-TTCATGCGTTAGAA-CCTCAAGAACAAATAGATTTCAGGTTTCGGG 256 Query 806 TCAATCTACGCAGAACAACAACATACACTTGCACATTCTCGTGGCCAGGAAATGCAAAGA 865 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 257 TCAATCTACGCAGAACAACAACATACACTTGTACATTCTCGTGGCCAGGAAATGCAAAGA 316 Query 866 CGTTTGATATTTTTAGAGTGGATAGAGACGATAATTCAAAAAGTACATGTGGAATATGTA 925 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 317 CATTTGATATTTTTAGAGTAGATAGAGACGATAATTCAAAAAGTACATGTGGAATATGTA 376 Query 926 AAGAATGTATTTG 938 |||||||||||| Sbjct 377 GAGAATGTATTTG 389 > AT1G26797.1 | Symbols: | Plant self-incompatibility protein S1 family | chr1:9280955-9281560 FORWARD LENGTH=606 Length=606 Score = 372 bits (201), Expect = 6e-102 Identities = 276/312 (88%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 630 AGCGTTTGGAAACTTTTTATCTGTCGATGG-AGGTTTCCCGTTCTCACCTAAACATGTTG 688 |||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||| Sbjct 70 AGCGTTTGAAAACTTTTCATCTGTCGATGGTA-ATTTCCCGTTCTCACCTAAACATGTTA 128 Query 689 TAATCATCAACACATTGAACTCACAT-GAAATATTGGT-CGTGCACTGTAGGAATAAAGG 746 ||||||||||||| ||| || ||||| |||| ||| | ||||||||||||||||||||| Sbjct 129 TAATCATCAACACTTTGCACCCACATGGAAA-ATT-ATACGTGCACTGTAGGAATAAAGG 186 Query 747 GAAAGATTTGGGGTTTCGTGCGCTCCAATCCCAAGAACAAATAGATTTTAGGTTTCATGT 806 | ||||||| ||| ||| | | | ||| | ||||||||||||||| ||||||| ||| Sbjct 187 GGAAGATTTAGGGCTTCATAAGATAGAATATCGAGAACAAATAGATTTCAGGTTTCGTGT 246 Query 807 CAATCTACGCAGAACAACAACATACACTTGCACATTCTCGTGGCCAGGAAATGCAAAGAC 866 |||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct 247 CAATCTACGCAGAACAACAACATACACTTGTAAATTCTCGTGGCCAGGAAATGAAAAGAC 306 Query 867 GTTTGATATTTTTAGAGTGGATAGAGACGATAATTCAAAAAGTACATGTGGAATATGTAA 926 ||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||| Sbjct 307 GTTCGATATTTTTAGAGCGGATAGAGACGATAGTTCAAAAAGTACAAGTGGAATATGTAG 366 Query 927 AGAATGTATTTG 938 |||||||||||| Sbjct 367 AGAATGTATTTG 378 Score = 152 bits (82), Expect = 8e-36 Identities = 219/284 (77%), Gaps = 14/284 (5%) Strand=Plus/Plus Query 105 TTTACCATTCTCATCTAAACATGTAATCATCATCAACAAATTGGTCACACGTGCAACGTT 164 ||| || |||||| |||||||||| || |||||||||| ||| | ||| || || || Sbjct 103 TTTCCCGTTCTCACCTAAACATGTTATAATCATCAACACTTTGCACCCACATGGAAAATT 162 Query 165 GAT-TGTACATTGTACAAACAAAGGAGATGATTTAGGG-GTAATAAGACTCA-ACCCTCT 221 || || || |||| || ||||| || ||||||||| | |||||| | | | || Sbjct 163 -ATACGTGCACTGTAGGAATAAAGGGGAAGATTTAGGGCTTCATAAGA-T-AGAATATCG 219 Query 222 AG-ATAGTTTTGATTTCAGGTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCA 280 || | | | ||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct 220 AGAACA-AATAGATTTCAGGTTTCGTGTCAATCTACGCAGAACAACAACATACACTTGTA 278 Query 281 GTTTCGAGTGGCCAGGCAAT--ACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGA 338 ||| ||||||||| ||| | || ||||| |||||||||||||||||||||||||| Sbjct 279 AATTCTCGTGGCCAGGAAATGAAAAG--ACGTTCGATATTTTTAGAGCGGATAGAGACGA 336 Query 339 TAATCCAAAAAGTA-AATATGGAGTTTGCAGCGAATGTATTTGG 381 || | ||||||||| || |||| | || || |||||||||||| Sbjct 337 TAGTTCAAAAAGTACAAG-TGGAATATGTAGAGAATGTATTTGG 379 Score = 147 bits (79), Expect = 4e-34 Identities = 188/240 (78%), Gaps = 9/240 (4%) Strand=Plus/Plus Query 388 TTTCCC-TTCGCATCTAAACATGTTATCATCATCAACAAATTGGTCACACTTGCAACGTT 446 |||||| ||| || ||||||||||||| |||||||||| ||| | ||| || || || Sbjct 103 TTTCCCGTTCTCACCTAAACATGTTATAATCATCAACACTTTGCACCCACATGGAAAATT 162 Query 447 GAT-TGTGCATTGTAGGAACAAAGGGGACGATTTAGGG-GTAATAAGCCTCCAACATTTA 504 || ||||| |||||||| |||||||| ||||||||| | ||||| | || || | Sbjct 163 -ATACGTGCACTGTAGGAATAAAGGGGAAGATTTAGGGCTTCATAAG-ATAGAATATCGA 220 Query 505 GCTCGTTTTGATTTCAGGTTTCGTGTCAATCTCCGTAAAACAACAACGTACACTTGCAGT 564 | | | ||||||||||||||||||||||| || | ||||||||| |||||||| | Sbjct 221 GAACAAATAGATTTCAGGTTTCGTGTCAATCTACGCAGAACAACAACATACACTTGTAAA 280 Query 565 TTCGAGTGGCCCGGCAAT--ACAGCTACGTTTGATATTTTTAGAGCGGATAGAGACGATA 622 ||| |||||| || ||| | || ||||| |||||||||||||||||||||||||||| Sbjct 281 TTCTCGTGGCCAGGAAATGAAAAG--ACGTTCGATATTTTTAGAGCGGATAGAGACGATA 338 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70682367360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5