BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg313424 Length=1092 Score E Sequences producing significant alignments: (Bits) Value AT1G24570.1 | Symbols: | Protein of unknown function (DUF707) ... 1707 0.0 AT1G67850.1 | Symbols: | Protein of unknown function (DUF707) ... 715 0.0 > AT1G24570.1 | Symbols: | Protein of unknown function (DUF707) | chr1:8707197-8709589 FORWARD LENGTH=1244 Length=1244 Score = 1707 bits (924), Expect = 0.0 Identities = 1038/1094 (95%), Gaps = 4/1094 (0%) Strand=Plus/Plus Query 1 ATGAAGCTTCTTACAACAGCATTGTTTGCTATAGCTTTTGGCATTCTTGTTGGACTATCT 60 ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 55 ATGAAGCTTTTTACAACAGCATTGTTTGCTATAGCTTTTGGCATTGTTATTGGACTATCT 114 Query 61 TTTCCATCTTTATGGATCACTGAGACGAGTCTCCCCAGAAACCTTCTTCGCTCCATTGCT 120 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 115 TTTCCATCTTTATGGATCACTGAGACAAGTCTCCCGAGAAACCTTCTTCGCTCCATTGCT 174 Query 121 ATCTCACTTAGAGATTCAGGAATTGCAACTCCTCCCAAGGCCATTGATATCTCAAAGGCA 180 ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| Sbjct 175 ATCTCACTTAGAGATTCCGGAATTGCAACTCCTCACAAAGCCATTGATATCTCAAAGGCA 234 Query 181 TGCGCTGAGAGATTACCACCCGGTATTATTGCATCCGAATCGGACTTGTATTTGCGCAGA 240 |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct 235 TGCGCTGAGAGATTACCATCCGGTATCATTGCATCCGAATCGGACTTGTACTTGCGCAGA 294 Query 241 TTATGGGGGAACCCTGATGAGGATTTGA-AGAAGCAACCGAGATATCTAGCAACATTTAC 299 |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||| Sbjct 295 TTATGGGGGAACCCTGATGAGGATTT-AGTGAAACAACCGAGATATCTAGCAACATTTAC 353 Query 300 AGTGGGTTATAATCAGAGACACAATATAGATGCTTGTGTTAACAAGTTTTCAGACAACTT 359 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| Sbjct 354 AGTGGGTTATAATCAGAGACACAATATAGATGCGTGTGTTAGCAAGTTTTCAGAGAACTT 413 Query 360 TACAATTGTTCTGTTTCATTACGATGG-GATAACAAGTGCGTGGAACGATGAGTTTGAGT 418 ||| ||||||||||||||||| ||||| | |||||||||| ||||| ||||||||||||| Sbjct 414 TACTATTGTTCTGTTTCATTATGATGGCG-TAACAAGTGCATGGAATGATGAGTTTGAGT 472 Query 419 GGTCGAAGAATGCAATACACATAAGTGTCAAAAAGCAGACAAAATGGTGGTATGCAAAGA 478 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 GGTCGAGGAATGCAATACACATAAGTGTCAAAAAGCAGACAAAATGGTGGTATGCAAAGA 532 Query 479 GATTCTTGCATCCGGACATTGTAGCACGATACGATTATATATTCATATGGGATGAAGATC 538 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 533 GATTCTTGCACCCGGACATTGTAGCACGATACGATTATATATTCATATGGGATGAGGATC 592 Query 539 TTGGAGTCGATCACTTTAACGCAGAAGAATACATACACATGGTGAAGAAGCACGGCCTTG 598 ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||| Sbjct 593 TTGGAGTTGATCACTTTAATGCAGAAGAATACATACACATAGTGAAGAAGCACGACCTTG 652 Query 599 AGATTTCGCAGCCTGGTTTGGACCCAGAGAGAGGGTTTAACTGGCAGATCACCAAAAGAA 658 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 653 AGATTTCGCAGCCTGGTTTGGACCCAGAGACTGGGTTTAATTGGCAGATCACCAAAAGAA 712 Query 659 GAGAACATAGTGAAGTCCATAAGGAAACAGATGAAAAACTCGACTGGTGCTCTCATCCTC 718 ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| Sbjct 713 GAGAACATAGTGAAGTCCACAAGGAGACAGATGAGAAACTCGACTGGTGCTCTAATCCTC 772 Query 719 CTCGGCCTCCATGTGCTGCATTCGTGGAGATAATGGCTCCTGTATTCTCAAGAGATGCGT 778 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 773 CCCGGCCTCCATGTGCTGCATTCGTGGAGATAATGGCTCCTGTATTCTCAAGAGATGCAT 832 Query 779 GGCGCTGCGTCTGGCACATGATCCAGAATGATTTGGTTCACGGTTGGGGCCTTGACTTTG 838 |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 833 GGCGCTGCGTGTGGCATATGATCCAGAATGATTTGGTTCACGGTTGGGGTCTTGACTTTG 892 Query 839 CACTCAGAAGATGTGTTGAGGAGCCTGCATTTGAGAATATAGGAATAGTAGACTCACAGT 898 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 893 CACTGAGAAGATGTGTTGAGGAGCCTGCATTTGAGAAGATAGGAATAGTAGACTCACAGT 952 Query 899 GGATCGTTCATCAATTTATCCCTTCCCTTGGCAACCAGGGAAAAGAAGATAATGGGAAAG 958 |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| Sbjct 953 GGATCGTTCATCAATTTATCCCTTCCCTTGGCAACCAGGGGAAAGCAGATAACGGGAAAG 1012 Query 959 CGCCATGGCAAGGGGTGAGGGATAGATGTCAAATGGAATGGAAAATGTTCGAGAACAGAG 1018 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 CACCATGGCAAGGGGTGAGGGATAGATGTCAAATGGAATGGAAAATGTTCGAGAACAGAG 1072 Query 1019 TAGATGCCGCGGAAAAGGATTATTTCAAATCATTACAAGTCGAAAGCCCATCCAATTCAA 1078 | || |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| Sbjct 1073 TGGAAGCCGCGGAAAAGGATTATTTCAGATCGTTACAAGTTGAAAGCCCATCCAATTCAA 1132 Query 1079 CAACCTCTCAATAG 1092 |||| ||||| ||| Sbjct 1133 CAACTTCTCATTAG 1146 > AT1G67850.1 | Symbols: | Protein of unknown function (DUF707) | chr1:25437900-25442142 FORWARD LENGTH=1933 Length=1933 Score = 715 bits (387), Expect = 0.0 Identities = 740/905 (82%), Gaps = 46/905 (5%) Strand=Plus/Plus Query 196 CCACCCGGTATTATTGCAT-CCGAATCGGACTTGTATTTGCGCAGATTATGGGG-GAACC 253 ||||| ||||| |||| | | ||||| ||||| |||||||||||||||||||| | | Sbjct 802 CCACCGGGTATGGTTGC-TGCTGAATCAGACTTCTATTTGCGCAGATTATGGGGTTTA-C 859 Query 254 CTG-ATGAGGATTTGAAGAAG-CAACCGAGATATCTAGCAACATTTACAGTGGGTTA-TA 310 | | ||||||||||||| ||| |||| ||||| || ||||||||||||||||| || || Sbjct 860 C-GCATGAGGATTTGAA-AAGTGAACCAAGATACCTCGCAACATTTACAGTGGG-TATTA 916 Query 311 ATCAGAGA-CACAATATAGATGCTTGTGTTAACAAGTTTTCAGACAACTTTACAATTGTT 369 |||||| | || ||||| ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 917 ATCAGAAAGCA-AATATCGATGCTTGTGTCAAGAAGTTTTCAGAAAACTTCACTATTGTC 975 Query 370 CTGTTTCA-T-T-AC-GATGGGATAACAAGTGCGTGGAACGATGAGTTTGAGTGGTCGAA 425 |||||||| | | || | ||| |||| || |||| ||||||||||| ||||| || Sbjct 976 CTGTTTCACTATGACGGCCGGG-TAAC---TGAGTGG---GATGAGTTTGAATGGTCAAA 1028 Query 426 GAATGCAATACACATAAGTGTCA-AAAAGCAGACAAAATGGTGGTATGCAAAGAGATTCT 484 || ||| |||||||| || || | |||||||||||||||||||||||||||||| || | Sbjct 1029 GACTGCTATACACATTAGCGT-ACGAAAGCAGACAAAATGGTGGTATGCAAAGAGGTTTT 1087 Query 485 TGCATCCGGACATTGTAGCACGATACGATTATATATTCATATGGGATGAAGATCTTGGAG 544 |||| || || ||||||||| |||| |||||||| ||| | ||||||||||| || || | Sbjct 1088 TGCACCCTGATATTGTAGCAAGATATGATTATATCTTCGTCTGGGATGAAGACCTGGGTG 1147 Query 545 TCGATCACTTTAACGCAGAAGAATACATACACATGGTGAAGAAGCACGGCCTTGAGATTT 604 |||| || |||||||||||||| ||| || | |||||||||||||||||||| ||||||| Sbjct 1148 TCGAGCATTTTAACGCAGAAGAGTACGTAAAGATGGTGAAGAAGCACGGCCTGGAGATTT 1207 Query 605 CGCAGCCTGGTTTGGACCCAGAGAGAGGGTTTAAC-TGGCAGATCACCAAA-AGAAGAGA 662 | || ||||| ||||| ||| | |||| |||| ||||| || || ||| ||| ||| Sbjct 1208 CCCAACCTGGCTTGGAACCAAACC-AGGGACTAACGTGGCAAATGAC-AAAGAGACGAGG 1265 Query 663 ACATAGTG-AAGTCCATAAGGA-AACAGATGAAAAAC-TCGACTGGTGCTCTCATCCTCC 719 | ||| || |||| || ||| | |||||| |||| || | || |||||||| |||||| Sbjct 1266 AGATA-TGGAAGTTCACAAG-ATAACAGAAGAAAGACCTGGA-TGGTGCTCAGATCCTCA 1322 Query 720 TCGGCCTCCATGTGCTGCATTCGTGGAGATAATGGCTCCTGTATTCTCAAGAGATGCGTG 779 || |||||||||||||||||||| ||||| |||||||||||||| |||||| |||| || Sbjct 1323 TCTCCCTCCATGTGCTGCATTCGTAGAGATCATGGCTCCTGTATTTTCAAGAAATGCCTG 1382 Query 780 GCGCTGCGTCTGGCACATGATCCAGAATGATTTGGTTCACGGTTGGGGCCTTGACTTTGC 839 ||| ||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1383 GCGATGCGTGTGGCATGTGATCCAGAATGATTTGGTACACGGTTGGGGTCTTGACTTTGC 1442 Query 840 ACTCAGAAGATGTGTTGAGGAGCCTGCATTTGAGAATATAGGAATAGTAGACTCACAGTG 899 ||||||||||||||||||| |||||| |||||| |||||| |||| || || || || Sbjct 1443 ACTCAGAAGATGTGTTGAG---CCTGCACATGAGAAGATAGGAGTAGTTGATTCTCAATG 1499 Query 900 GATCGTTCATCAAT-TTATCCCTTCCCTTGGCAACCAGGGAAAAGAAGATA-ATGGGAAA 957 | |||||||||||| || ||| ||||||||||||||| || | | || | | |||||| Sbjct 1500 GGTCGTTCATCAATCTTTTCC-TTCCCTTGGCAACCAAGGTGAGGC-GACAGACGGGAAA 1557 Query 958 GCGCCATGGCAAGGGGTGAGGGATAGATGTCAAAT-GGAATGGAAAATGTTCGAGAACAG 1016 || |||||||||||||||||||||||||| |||| |||||||| ||||||| ||| || Sbjct 1558 GCACCATGGCAAGGGGTGAGGGATAGATG-CAAAAAGGAATGGACAATGTTCCAGAGTAG 1616 Query 1017 AGTAGATGCCGCGGAAAAGGATTATTTCAAATCATTACAAGTCGAAAGC-CCATCCAATT 1075 | | | | ||| || ||||||||||||||||| |||||||| ||| || || || |||| Sbjct 1617 AATGGCTAACGCAGAGAAGGATTATTTCAAATCCTTACAAGTAGAAGGCTCC-TCAAATT 1675 Query 1076 CAACA 1080 ||||| Sbjct 1676 CAACA 1680 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53513780970 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5