BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313471
Length=3147
Score E
Sequences producing significant alignments: (Bits) Value
AT1G27461.1 | Symbols: | unknown protein; Has 30201 Blast hits... 1587 0.0
AT1G27470.1 | Symbols: | transducin family protein / WD-40 rep... 1465 0.0
AT4G07410.1 | Symbols: | Transducin family protein / WD-40 rep... 686 0.0
> AT1G27461.1 | Symbols: | unknown protein; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:9537746-9539013
REVERSE LENGTH=1268
Length=1268
Score = 1587 bits (859), Expect = 0.0
Identities = 961/1012 (95%), Gaps = 0/1012 (0%)
Strand=Plus/Plus
Query 2136 ACCCATTGCTCCTAAGCCCGGGACGCCTCGAGTTAATGACGATGACCCCTCTTCCTCTAT 2195
||||||||| || |||||||||||||||||||| || |||||||| || |||||||||||
Sbjct 82 ACCCATTGCACCAAAGCCCGGGACGCCTCGAGTGAACGACGATGATCCTTCTTCCTCTAT 141
Query 2196 GTCTCACAAGATCAGCCAATCTCCTTACCTTCGTAACCTCTGGCCTCAGCTTCAAGCGCG 2255
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 GTCTCACAAAATCAGCCAATCTCCTTACCTTCGTAACCTCTGGCCTCAGCTTCAAGCGCG 201
Query 2256 GCCTACAAGAACCCGCAAGCGAGGCCGAGGCGGGATGGGTCCCTCTTCTCTTGCTATGAA 2315
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 ACCTACAAGAACCCGCAAGCGAGGCCGAGGCGGGATGGGTCCCTCTTCTCTTGCTATGAA 261
Query 2316 GAGACCAAAGTCGTTATGCGGTTCTTCTCCCACTTCTACTAATTCTACACAACGTGTTCT 2375
|||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 262 GAGACCAAAGTCGTCATGCGGTTCTTCTAGTACTTCTACTATTTCTACACAACGTGTTCT 321
Query 2376 TGGACCTATTAAAACACTGCCGTTTCAGGCTTTCACTCATCATGGGTTACCTAACCTAGC 2435
||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
Sbjct 322 TGGACCTATTAAAACACTGTCGTTTCAGGCTTTCACTCATCATAGGTTACCTAACCTACC 381
Query 2436 TCAAGTTGGCTACGCTTTGGACAATGGTGGCTCTTCTGCTTTGGTGACTTTACCTCTTCT 2495
|||||||||||||| ||| || ||||||| ||||||| ||||||||||||| ||||||||
Sbjct 382 TCAAGTTGGCTACGGTTTTGAGAATGGTGTCTCTTCTACTTTGGTGACTTTGCCTCTTCT 441
Query 2496 TCAATGCTCTCCTCCTTCCTCCAAATGCATGGAGCCAGAGATCAAAGGAAAAGGTGTCAT 2555
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 CCAATGCTCTCCTCCTTCCTCCAAATGCATGGAGCCAGAGATCAAAGGAAAAGGTGTCAT 501
Query 2556 TGATCTCAACAAGACCGCGGAAGTGATACAAGAGAGAGATTTCTTGACGCAACTACAAGG 2615
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 502 TGATCTGAACAAGACCGCGGAAGTGATACAGGAGAGAGACTTCTTGACGCAACTACAAGG 561
Query 2616 ACCCATCACCACACCCACAACCGCAACCACAAGCAGAGTCATATCACCGCAGGCCATAAG 2675
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 562 ACCCATCACCACAACCACAACCGCAACCACAAGCAGAGTCATATCACCGCAGCCCATAAG 621
Query 2676 ACCGGTTTGCTCAAAGATCAACGTAGCCTACATAAACCCACTAACCAACCCATCTCCACC 2735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 622 GCCGGTTTGCTCAAAGATCAACGTAGCCTACATAAACCCACTAACCAACCCATCTCCAAC 681
Query 2736 ATCTCAAACCAGCAAGAAATCACCAAGAGAGGTCGAAGAGGAAGTCGAATCCGATGACTT 2795
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 682 GTCTCAAACCAGCAAGAAATCACCAAGAGAGGTCGAAGAGGATGTTGAATCCGATGACTT 741
Query 2796 GCCCTCTGTGATCACCGATTCCAACAACAGGGTCAGGCTCGTGAACTCCGCTTACAAGGA 2855
|||||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct 742 GCCCTCAGTGATCACCGATTCAAACAGCAGGGTCAGACTCGTGAACTCCGCTTACAAGGA 801
Query 2856 AATGATGGGTCAGCCCGAGTGCTCGTGGCTGGATTCAATGGTGAGAGGGAAGAGGATCTG 2915
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 802 AATGATGGGGCAGCCAGAGTGCTCATGGCTGGATTCAATGGTGAGAGGGAAGAGGATCTG 861
Query 2916 TGGGGAAGTGATTATCCATTTTTGTGAATCCAAAATTCCAGTGATGACTGAGAATAATGG 2975
||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 862 TGGAGAAGTGATGATCAATTTTTGTGAATCCAAAATTCCAGTGATGACTGAGAACAATGG 921
Query 2976 GTTTTCTTGCTGGGTGAGGATAGATTGGGGAAGAGTCGGTAAGGAGGAGTACATGCATGC 3035
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 922 GTTTTCTTGCTGGGTAAGGATAGATTGGGGAAGAGACGGTAAGGAGGAGTACATGCATGC 981
Query 3036 CTTTTGCGATGTTACGAAACTTGCTTGCGATTCCAAAGATTATGTCTTTACGTGGAGGTT 3095
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 982 CTTTTGCGATGTTACGAAACTTGCTTGCGATTCCAAGGATTATGTCTTTACGTGGAGGTT 1041
Query 3096 TCACACAACCACTGACCGCAGAGATACTTGTCATTCAAGCTGCAACGTTTAG 3147
|||||||||||||||||||||| | ||||| || ||||||||||||||||||
Sbjct 1042 TCACACAACCACTGACCGCAGATAGACTTGCCAGTCAAGCTGCAACGTTTAG 1093
> AT1G27470.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:9540113-9544292 REVERSE LENGTH=2762
Length=2762
Score = 1465 bits (793), Expect = 0.0
Identities = 874/913 (96%), Gaps = 5/913 (1%)
Strand=Plus/Plus
Query 1224 GGATTCTTGTTCTTTAGATATTCTTCGTATTCACATAAGCAATGATTCCAGTGGGCGAGT 1283
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1418 GGATTCTTGTTCTTTAGATATTCTTCGTATTCACATAAGCAATGATTCTAGTGGGCGTGT 1477
Query 1284 CTCCACCAAGCCATTGGTTCGCGTTAAAAGTAAAGATGCCCGGAAGATCATATGCAGTGC 1343
|||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1478 CTCCACTAAGCCATTGGTTCGTGTTAAAAGTAAAGATGCTCGGAAGATCATATGCAGTGC 1537
Query 1344 AATTTCTAACACAGGATCACTTTTTGCTTATTCTGATCAAGTTCGCCCAAGTCTGTTTGA 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1538 AATTTCTAACACAGGATCACTTTTTGCTTATTCTGATCAAGTTCGCCCAAGTCTGTTTGA 1597
Query 1404 GTTGAAGAAAAATAAACTTGGAAAGAATCCATGGAGTGCTAATAGAAAGCGACTTCCCAA 1463
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1598 GTTGAAGAAAAATAAAATTGGAAAGAATCCATGGAGTGCTAATAGAAAGCGACTTCCTAA 1657
Query 1464 TCTTCCGTTTGCCCATTCCATGGTTTTCAGCTGTGACTGCAGTCGGCTGATAATTGCTGG 1523
|||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1658 TCTTCCGTTTGCCCATTCCATGGTTTTCAGCTGTGACTGCTCTCGGCTGATAATAGCTGG 1717
Query 1524 ACATGATAGAAGGATATATATTGTTGACGTTGGTAGCATGGAGCTATTACATTCTTTTAC 1583
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1718 ACATGATAGGAGGATATATATTGTTGACGTTGGTAGCATGGAGTTATTACATTCTTTTAC 1777
Query 1584 TCCACGCCAGGAGGGGCAGGAAGGCGAATCTCCTCCTCGCGAGCCTCCAATTACAAAACT 1643
|||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1778 ACCACGCCAGGAGGGACAGGAAGGTGAATCTCCTCCTCATGAGCCTCCAATTACAAAACT 1837
Query 1644 GTATACTAGCTCAAATGATGATTGGTTAGCTGCTATCAATTGCTTTGGGGACATATATGT 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 GTATACTAGCTCAAATGATGATTGGTTAGCTGCTATCAATTGCTTTGGGGACATATATGT 1897
Query 1704 GTTCAACCTAGAAACGCAGAGGCAGCATTGGTTCATATCAAGGCTTGATGGTGCATCTGT 1763
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1898 GTTCAACCTGGAAACGCAGAGGCAGCATTGGTTCATATCAAGGCTTGATGGTGCATCTGT 1957
Query 1764 TGCAGCCGCTGGTTTTCATCCGAGGGACAACAATGTGCTTGTGATCTCGACCTCTTCAAA 1823
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1958 TGCAGCCGCTGGTTTTCATCCGAGGGACAACAATGTGATTGTGATCTCCACCTCTTCAAA 2017
Query 1824 CCAGGTCTTTGCATTGGACGTGGAGGCTAGAGAGTTGAGCAAGTGGTCACTGCTGCACAC 1883
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||
Sbjct 2018 CCAGGTCTTTGCATTGGATGTGGAGGCTAGAGAGTTGAGCAAGTGGTCATTGCTGCAGAC 2077
Query 1884 TTTTTGTTTGCCAAAGAGCTACCAAAATTTTCCTGGTGAGGTCGTAGGACTCTCATTCTC 1943
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2078 TTTTTGTCTGCCAAAGAGCTACCAAAATTTTCCTGGTGAGGTCGTAGGACTCTCATTCTC 2137
Query 1944 TCCGTCACCAAGTTCATCATCTGTAATCATTTACAGCTCCAGCAGAGCTAAGTGTTTGAT 2003
||| |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct 2138 TCCATCACCATGTTCATCATCTGTCATCATTTACAGCTCCAG-AG--CTAAGTGTTTGAT 2194
Query 2004 TGAATTTGGGAAGCCGGCGGAACAAGACGAGGA-AGCGGATTCGCCATGCAATTTGTCTG 2062
|||||||||||||||||||||||||||||| || | ||||| | ||||||||| |||| |
Sbjct 2195 TGAATTTGGGAAGCCGGCGGAACAAGACGAAGACA-CGGATACACCATGCAATCTGTCCG 2253
Query 2063 AAAAGCTAGAAGGTAAACTTGCAAGCATTGGTATGAAATTGGGGAATGGTGCTCAAAAAC 2122
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2254 AAAAGCTAGAAGGTAAACTTGCAAGCATTAGTATGAAATTGGGGAATGGTGCTCAAAAAC 2313
Query 2123 GTAGGCTAGAGGA 2135
||||| |||||||
Sbjct 2314 GTAGGTTAGAGGA 2326
Score = 996 bits (539), Expect = 0.0
Identities = 620/660 (94%), Gaps = 2/660 (0%)
Strand=Plus/Plus
Query 1 ATGTTTGAGTACCGGTGCAGCTCCATCGATTGGAAGCCATCGCCGGTGGTAGCTCTTGCT 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 75 ATGTTTGAGTACCGGTGCAGCTCCATCGATTGGAAGCCATCTCCGGTGGTAGCTCTGGCC 134
Query 61 ACCAGCTCCGACGGCTCTCAGGTTGCCGCAGCTCGAGAAGATGGTTCTCTTGAGCTCTGG 120
|||||| ||||||| |||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 135 ACCAGCGCCGACGGTTCTCAGGTCGCCGCAGCTCGTGAGGATGGTTCTCTTGAGCTCTGG 194
Query 121 CTCGTCTCTCCGGGTGCTTCCTCTTGGCACTGTCAGCTCATCATCCATGGAGATCCAAAA 180
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 195 CTCGTCTCTCCCGGTGCTTCCTCTTGGCACTGTCAGCTCATCATTCATGGAGATCCAAAA 254
Query 181 TCGAGAATCTCGCACCTTGCGTGGTTTGGTGCTGGTTCTAAAGGTTCGTCTTCTGCTAGA 240
|||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||
Sbjct 255 TCGAGAATCTCGCACCTTGCGTGGTTTGGTACTGGTTCTAAAGGTTCTTCTTCCGCTAGA 314
Query 241 TTGTTTTCTTCTAGCATTGATGGCACAATTTCAGAGTGGGATCTTTTCGACTTGAAGCAA 300
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 315 TTGTTTTCTTCGAGCATTGATGGCTCAATTTCAGAGTGGGATCTTTTCGACTTGAAGCAG 374
Query 301 AAGGTCGTTCTAGAGTCACTTGGAGTAT-CAATCTGGCAAATAGCTCTGGCGCCTCTTTC 359
|||||||| ||||| ||| |||| || | |||||||||||||||||||||| ||| | ||
Sbjct 375 AAGGTCGTCCTAGATTCAATTGG-GTTTTCAATCTGGCAAATAGCTCTGGCCCCTATCTC 433
Query 360 CATTGAAGCAGAAGGTCAAGAAGCTAAACTGATTCAGAATGGATACTTGAGTGAGAAATC 419
|||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 434 TATTGAAGCAGAAAGTAAAGAAGCTAAGCTGATTCAGAATGGATACTTGAGTGAGAAATC 493
Query 420 AGATGACGAGGAAGAAAGTGGAGTTGAAGATGATTCTGAGTTGGACGAGCTTGATGAGAA 479
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 494 AGACGACGAGGAAGAAAGTGGAGTTGAAGATGATTCAGAGTTGGACGAGCTTGATGAGAA 553
Query 480 AGTAGAGGCCTTGGATAGGCATCTTGCAGCTGCTTGTGATGATGGTTGTGTGAGGATATA 539
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 554 AGTGGAGGCCTTGGATAGGCATCTTGCAGCTGCTTGTGATGATGGCTGTGTGAGGATATA 613
Query 540 TTATATCTCTGAATCAGACAAGTTAACTTACTATAGATCGTTGCCTAGGGTCAGTGGTCG 599
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||||
Sbjct 614 TTATATCTCTGAATCTGACAAGTTAACGTACTATAGATCTTTGCCTAGGGTCACTGGTCG 673
Query 600 TGCTTTAAGTGTGACGTGGAGTTCGGACGCACAGAGAATCTTTTCGGGCAGTAGCGATGG 659
|||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||
Sbjct 674 TGCTTTAAGTGTGACGTGGAGTGCGGACGCACAGAGGATCTTTTCAGGCAGTAGCGATGG 733
Score = 782 bits (423), Expect = 0.0
Identities = 548/601 (91%), Gaps = 38/601 (6%)
Strand=Plus/Plus
Query 659 GAATCACAGTTGGACTTGGAGGACTGGGAAATGGGTCTGAGCTCTGCATCTGGT--C-TC 715
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 778 GAATAACAGTTGGACTTGGAGGACTGGGAAATGGGTCTGAGCTCTGCATCTGGTCACTTC 837
Query 716 -TTC--T----T-T--CG---TTG--AGTGGAGATAGTACAGGAAGTGTCCAGTTTTGGG 760
||| | | | | ||| ||||||||||||||||||||||||||||||||||
Sbjct 838 TTTCATTGAGATATGGAGTTCTTGTCAGTGGAGATAGTACAGGAAGTGTCCAGTTTTGGG 897
Query 761 ATAGCCAGCATGGAACCCTATTGCAGGCGCATTCTAATCACAAGGGTGATGTCAATGCTC 820
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 898 ATAGCCAGCATGGAACCCTTTTGCAGGCGCATTCTAATCACAAGGGTGATGTCAATGCTC 957
Query 821 TTGCAGCAGCCCCAAGTCATAACCGGGTGTTTTCTGCAGGCGCTGATGGAC--------- 871
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TTGCAGCATCCCCAAGTCATAACCGGGTGTTTTCTGCAGGCGCTGATGGACAGGTTATTT 1017
Query 872 ------AGCTCTCTGGTGGTACATTTAAATCACAAGATTTTAAACCTTCTTCCT-CTCAG 924
|||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct 1018 TATATAAGCTCTCTGGTGGTACATCTAGATCACAAGATTTTAAACCTTCTT-CTGCTCAG 1076
Query 925 AAGTGGGATTATATCGGTTGTGTAAGGGCTCATACACATGACATCAGGGCTCTAACTGTT 984
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1077 AAGTGGGATTATATCGGTTGTGTAAGGGCTCATACACATGATATCAGGGCTCTAACTGTT 1136
Query 985 GCAGTGCCAATAAGTTGGGAAGGTTCCCTTCCAGACAGTAATGCAAAAGTAACAAGTCCT 1044
||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||
Sbjct 1137 GCAGTGCCAATAAGTTGGGAAGGTTCCATTCCAGATAGGAATGCAAAAGTAACAAGTCCT 1196
Query 1045 AAACAGCGCAGGAAGGAGAAGCCGGTTGGTTTCAGTTATCATAAATGGGCACATTTGGGG 1104
|||||||||||||| | | |||||| |||||||||||| |||||||||||||||||||||
Sbjct 1197 AAACAGCGCAGGAA-G-G-AGCCGGCTGGTTTCAGTTACCATAAATGGGCACATTTGGGG 1253
Query 1105 GTTCCGATGCTCATTTCAGCTGGTGATGATGCAAAGTTTTATGCATACTCAGTTCAAGAG 1164
|||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct 1254 GTTCCGATGCTCATTTCAGCTGGTGATGATGCCAAGCTTTATGCATACTCGGTTCAAGAG 1313
Query 1165 TTTACTAAGTTCCCTCCACATGATATATGTCCTGCGCCTCAGAGAGTGCCCATGCAGATG 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 TTTACTAAGTTCCCTCCACATGATATATGTCCTGCGCCTCAGAGAGTGCCCATGCAGATG 1373
Query 1225 G 1225
|
Sbjct 1374 G 1374
> AT4G07410.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr4:4201249-4205224 REVERSE LENGTH=2752
Length=2752
Score = 686 bits (371), Expect = 0.0
Identities = 708/869 (81%), Gaps = 30/869 (3%)
Strand=Plus/Plus
Query 1235 CTTTAGATATTCTTCGTA-TTCACATAAGCAATGATTCCAGTGGGCGAGTCTCCACCAAG 1293
|||||||||||||||| | || | ||||||| |||||| ||||| || | ||| || |||
Sbjct 1449 CTTTAGATATTCTTCG-ACTTAATATAAGCAGTGATTCTAGTGGTCGTGCCTCAACAAAG 1507
Query 1294 CCATTGGTTCGCGTTAAAAGTAAAGATGCCCGGAAGATCATATGCAGTGCAATTTCTAAC 1353
|||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 1508 TCATTGGTTCGTGTTAAAAGTAGAGATGCCCGAAAGATCATATGCAGTGCAATTTCTAAC 1567
Query 1354 ACAGGATCACTTTTTGCTTATTCTGATCAAGTTCGCCCAAGTCTGTTTGAGTTGAAGAAA 1413
|| ||||||| ||||||||| ||||| ||| || |||| |||||||| ||||||||||||
Sbjct 1568 ACCGGATCACATTTTGCTTACTCTGACCAAATTGGCCCCAGTCTGTTCGAGTTGAAGAAA 1627
Query 1414 AATAAACTTGGAAAGAATCCATGGAGTGCTAATAGAAAGCGACTTCCC-AATCTTCCGTT 1472
||| || || |||| ||||||||||| || ||||| ||||||||| || ||||| ||
Sbjct 1628 AATGAATTTACAAAGTGTCCATGGAGTGTTAGTAGAAGGCGACTTCCTGAA-CTTCCATT 1686
Query 1473 TGCCCATTCCATGGTTTTCAGCT-GTGACTGCAGTCGGCTGATAATTGCTGGACATGATA 1531
||| ||||||||| ||||||| | | |||||| ||| || ||||| || || |||||||
Sbjct 1687 TGCACATTCCATGATTTTCAGTTCG-GACTGCTCTCGTCTAATAATAGCAGGGCATGATA 1745
Query 1532 GAAGGATATATATTGTTGACGTTGGTAGCATGGAGCTATTACATTCTTTTACTCCACGCC 1591
|||||||||||| | ||||| | |||| |||| ||| || || | ||||| ||| |
Sbjct 1746 GAAGGATATATACTATTGACATAAGTAGTTTGGAACTAGTATATGCATTTACACCAT-CT 1804
Query 1592 AGG-AGGGGCAGGAAGGCGAATCTCCT-C-C-TC-GCGAGCCTCCAATTACAAAACTGTA 1646
||| ||| ||| ||||| ||| |||| | | | | ||||||||||| |||||| |||
Sbjct 1805 AGGGAGGAGCATGAAGGTGAAGCTCCAACACCTAAG-GAGCCTCCAATAACAAAATTGTT 1863
Query 1647 TACTAGCTCAAATGATGATTGGTTAGCTGCTATCAATTGCTTTGGGGACATATATGTGTT 1706
|||||||||| ||| | | ||| |||||||||||||||||||||||||||| ||||| ||
Sbjct 1864 TACTAGCTCAGATGGTCAGTGGCTAGCTGCTATCAATTGCTTTGGGGACATCTATGTATT 1923
Query 1707 CAACCTAGAAACGCAGAGGCAGCATTGGTTCATATCAAGGCTTGATGGTGCATCTGTTGC 1766
|||||| ||||| || |||||||| |||||||| ||||| || ||||||||||||||| |
Sbjct 1924 CAACCTCGAAACACAAAGGCAGCACTGGTTCATTTCAAGACTCGATGGTGCATCTGTTAC 1983
Query 1767 AGCCGCTGGTTTTCATCCGAGGGACAACAATGTGCTTGTGATCTCGACCTCTTCAAACCA 1826
|| ||||| |||||||| || | ||||||| ||||||||||| ||||| || || ||
Sbjct 1984 CGCTGCTGGATTTCATCCCTGGAATAACAATGCACTTGTGATCTCAACCTCCTCGAATCA 2043
Query 1827 GGTCTTTGCATTGGACGTGGAGGCTAGAGAGTTGAG-CAAGTGGTCACTGCTGCACACTT 1885
||||||||| || || || || |||||| |||| || ||||||||| |||| ||||||
Sbjct 2044 GGTCTTTGCTTTTGATGTAGAAGCTAGACAGTT-AGGCAAGTGGTCGTTGCTAAACACTT 2102
Query 1886 TTTGTT-TGCCAAAGAGCTACCAAAATTTTCCTGGTGAGGTCGTAGGACTCTCATTCTCT 1944
| ||| |||||||||| || ||| | |||||||| |||||| | ||||||||||||||
Sbjct 2103 AT-GTTCTGCCAAAGAGGTATCAAGAGTTTCCTGGGGAGGTCCTTGGACTCTCATTCTCC 2161
Query 1945 CCGTCACCAAGTTCATCATCTGTAATCA-TTTACAGCTCCAGCAGAGCTAAGTGTTTGAT 2003
|||||||||| |||||||||||| || | ||||||| ||||| || | || ||||||||
Sbjct 2162 CCGTCACCAAATTCATCATCTGTGAT-AGTTTACAGTTCCAG-AGCGA-AA-TGTTTGAT 2217
Query 2004 TGAATTTGGGAAGCCGGCGGAACAAGACGAGGAAGCG-GATTCGCCAT--G-CAATTTGT 2059
|| || |||||||| | |||| |||| || || | |||| ||| | ||||||||
Sbjct 2218 CGACTTCGGGAAGCCTGTGGAAGAAGATGAAGA-GTATGATTTACCAAACGGCAATTTGT 2276
Query 2060 CTGAAAA-GCTAGAAGGTAAACTTG-CAA 2086
|| |||| ||||||||||||||||| |||
Sbjct 2277 CT-AAAACGCTAGAAGGTAAACTTGTCAA 2304
Score = 405 bits (219), Expect = 1e-111
Identities = 431/528 (82%), Gaps = 36/528 (7%)
Strand=Plus/Plus
Query 725 TGAGTGGAGATAGTACAGGAAGTGTCCAGTTTTGGGATAGCCAGCATGGAACCCTATTGC 784
||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||
Sbjct 876 TGAGTGGAGATAGTACAGGAACTGTCCAGTTTTGGGATAGTGAGCATGGAACCCTTTTGG 935
Query 785 AGGCGCATTCTAATCACAAGGGTGATGTCAATGCTCTTGCAGCAGCCCCAAGTCATAACC 844
| || || ||||||||||| |||||||||||| |||||||||||||||| || ||||| |
Sbjct 936 AAGCACACTCTAATCACAAAGGTGATGTCAATACTCTTGCAGCAGCCCCCAGCCATAATC 995
Query 845 GGGTGTTTTCTGC-AG-GC-GCT-GA-TGG--A--C------AGCTCTCTGGTGGTACAT 889
| || |||||||| | || | | || || | | ||||||||||| ||||
Sbjct 996 GAGTCTTTTCTGCTGGTGCGGATGGACAGGTTATCCTTTATAAGCTCTCTGGTAGTAC-- 1053
Query 890 TTAA---ATCACAAGATTTTAAACCTTCTTCCTCTCAGAAGTGGGATTATATCGGTTGTG 946
||| || |||||||| || ||||||||||||||||| ||||| ||||| |||| ||
Sbjct 1054 -TAACGGTTCTCAAGATTTGAAGCCTTCTTCCTCTCAGAAATGGGACTATATTGGTTATG 1112
Query 947 T-AAGGGCTCATACACATGACATCAGGGCTCTAACTGTTGCAGTGCCAATAAGTTGGGAA 1005
| || ||||||||||||||||||||| ||||| || ||||| || ||||| ||| | |||
Sbjct 1113 TCAA-GGCTCATACACATGACATCAGAGCTCTTACAGTTGCTGTACCAATTAGTCGAGAA 1171
Query 1006 GGTTCC-CTTCC--A-GACAGTAATGCAAAAGT-AA-CAAGTCCTAAACAGCGCAGGAAG 1059
| ||| |||| | || | || ||| | | | || | |||| |||||| |||| |||
Sbjct 1172 -GATCCTTTTCCGGATGATA-TACTGCCAGA-TAAAGCGAGTCGTAAACATCGCAAAAAG 1228
Query 1060 GAGAAGCCGGTTGGTTTCAGTTATCATAAATGGGCACATTTGGGGGTTCCGATGCTCATT 1119
| ||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| |||
Sbjct 1229 GGGAAGCCGGTTGACTTCACTTATCATAAATGGGCTCATTTGGGTGTTCCGATGCTTATT 1288
Query 1120 TCAGCTGGTGATGATGCAAAG-TTTTATGCATACTCAGTTCAAGAGTTTACTAAGTTC-C 1177
|| |||||||||||||||||| |||| |||||| ||| |||| || |||||||||||| |
Sbjct 1289 TCTGCTGGTGATGATGCAAAGCTTTT-TGCATATTCAATTCAGGAATTTACTAAGTTCTC 1347
Query 1178 CTCCACATGATATATGTCCTGCGCCTCAGAGAGTGCCCATGCAGATGG 1225
| |||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct 1348 C-CCACATGATATATGTCCTGCGCCTCAGAGAATACCCATGCAAATGG 1394
Score = 403 bits (218), Expect = 5e-111
Identities = 531/676 (79%), Gaps = 46/676 (7%)
Strand=Plus/Plus
Query 7 GAGTACCGGTGCAGCTCCATCGATTGGAAGCCATCGCCGGTGGTAGCTCTTGCTACCAGC 66
|||||||| ||||||||| | || ||||| ||||| ||||||||||| || |||| ||||
Sbjct 95 GAGTACCGTTGCAGCTCCGTTGACTGGAAACCATCACCGGTGGTAGCCCTAGCTAACAGC 154
Query 67 TCCGACGGCTCTCAGGTTGCCGCAGCTCGAGAAGATGGTTCTCTTGAGCTCTGGCTCGTC 126
||||||| |||||| || ||||| ||||| || || ||||||||||| |||||||||||
Sbjct 155 TCCGACGACTCTCAAGTCGCCGCCGCTCGCGAGGACGGTTCTCTTGAAATCTGGCTCGTC 214
Query 127 TCTCCGGGTG-CTTCCTCTTGGCACTGTCAGCTCATC-ATCCATGGAGATCCAAAATCGA 184
|| || || | | | | ||||||||||| |||| | |||||||| |||||||| ||||
Sbjct 215 TCCCCCGGCGCCGT-CGGATGGCACTGTCAACTCA-CTATCCATGGCGATCCAAATTCGA 272
Query 185 GAATCTCGCAC-CTTGCGTGGT-TTGGTGCTGGTTCTA-AAGG-TTCGTCTTCTGCTAGA 240
|||||||| | |||||||||| | || || ||||| | || ||| |||||| | |
Sbjct 273 GAATCTCG-TCTCTTGCGTGGTGCT-GTTCTCCTTCTATAGGGCTTC--CTTCTGGTCGG 328
Query 241 TTGTTTTCTTCTAGCATTGATGGCACAATTTCAGAGTGGGATCTTTTCGACTTGAAGCAA 300
|| || || |||||||| |||||| | ||||| || |||||||||||||| ||||||||
Sbjct 329 TTATTCTCCTCTAGCATCGATGGCTCTATTTCTGAATGGGATCTTTTCGATTTGAAGCAG 388
Query 301 AAGGTCGTTCTAGAGTC-ACTTGGAGTATCAATCTGGCAAATAGCTCTGGCGCCTCTTTC 359
||| | || || ||||| | ||||| | || || |||||||| || | | | ||| |
Sbjct 389 AAGATTGTGCTTGAGTCTA-TTGGAATCTCGATATGGCAAATGGC-ATTG-G-CTC---C 441
Query 360 CATTGAAGCAGAAGGTC-A-AGAAGCTA-AACTG-ATTCAGAATGGATACTTGAGTGAGA 415
||| ||| || || | || | || || | ||| |||||||||||||||||||||
Sbjct 442 GATT--AGCGGATTCTCGAGTGATG-TAGAA-GGTATTAAGAATGGATACTTGAGTGAGA 497
Query 416 AATCAG-ATGACGAGGAAGAAAGT-GGAGT--TGAAGATGATTCTGAGTT-GGACGAGCT 470
|||| | |||| |||||||| | | ||||| ||||||| |||||| || || ||| |
Sbjct 498 AATC-GAATGATGAGGAAGAGATTGGGAGTGAAGAAGATGGTTCTGA-TTCCGATGAGTT 555
Query 471 TGATGAGAAAGT---A-GAGGCCTTGGATAGGCA-TCTTGCAGCTGCTTGTGATGATGGT 525
| ||||| |||| | |||| | |||||| | |||||||||||||||||||||||||
Sbjct 556 TCATGAG-AAGTCAGAGGAGGAGATAGATAGG-ATTCTTGCAGCTGCTTGTGATGATGGT 613
Query 526 TGTGTGAGGA-TATATTATATCTCTGAATC-AGACAAGTTAACTTACTATAGATCGTTGC 583
|||||||| | | || ||||||| ||| ||| |||||||||||||||||||| ||||
Sbjct 614 TGTGTGAG-ACTGTACCGTATCTCT-AATTTAGAAAAGTTAACTTACTATAGATCATTGC 671
Query 584 CTAGGGTCAGTGGTCGTGCTTTAAGTGTGACGTGGAGTTCGGACGCACAGAGAATCTTTT 643
||||||||||||| |||||||||||||| || |||||| | || ||| | || |||||||
Sbjct 672 CTAGGGTCAGTGGACGTGCTTTAAGTGTAACATGGAGTCCAGATGCAAAAAGGATCTTTT 731
Query 644 CGGGCAGTAGCGATGG 659
|||| || || |||||
Sbjct 732 CGGGGAGCAGTGATGG 747
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156520862160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5