BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313480
Length=3873
Score E
Sequences producing significant alignments: (Bits) Value
AT1G27595.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin... 3133 0.0
AT1G27590.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein o... 1323 0.0
AT1G27570.1 | Symbols: | phosphatidylinositol 3- and 4-kinase ... 800 0.0
> AT1G27595.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Symplekin
tight junction protein C-terminal (InterPro:IPR022075); BEST
Arabidopsis thaliana protein match is: HEAT repeat-containing
protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297
proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa -
139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes
- 345 (source: NCBI BLink). | chr1:9596360-9603255 FORWARD
LENGTH=3339
Length=3339
Score = 3133 bits (1696), Expect = 0.0
Identities = 1967/2091 (94%), Gaps = 45/2091 (2%)
Strand=Plus/Plus
Query 1085 AGAATAACCAGGTGAATAGTCATCAAAATTCTTGGGATTTGTCAAAGAAACGAATAATGC 1144
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 60 AGAATAACCAGGTGATTAGTCATCAAAATTCTTGGGATCTGTCAAAGAAACGAATAATGC 119
Query 1145 CCCAGGGTGAAGATGATACAATCAATGGAGAGGTTGCTCCGAAGCGCGTACGCCATAATA 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CCCAGGGTGAAGATGATACAATCAATGGAGAGGTTGCTCCGAAGCGCGTACGCCATAATA 179
Query 1205 CTAACATGAATTTGACCCAGCATGTTCAAACAAATGAATTCTTACAGGGATCTGTCTCTA 1264
|||||||| ||||||||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct 180 CTAACATGCATTTGACCCAGCAAGTTCAAACAAATGAATCCCTACAGGGACCTGTCTCTA 239
Query 1265 TCAATGGCATTTCCTCTGGTAACCATCCTTCGGACAGTGAGTTGACTCCAGTGGAACAAA 1324
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 240 TCAATGGCATTTCCTCTGGTAACCATCTTTCGGACAGTGAGTTGACTCCAGTGGAACAAA 299
Query 1325 TGGTTTCAATGATTGGTGCTTTGCTTGCTGAAGGAGACAGAGGAGCTGCCTCACTTGAAA 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TGGTTTCAATGATTGGTGCTTTGCTTGCTGAAGGAGACAGAGGAGCTGCCTCACTTGAAA 359
Query 1385 TTCTCATTTCTAAGCTTCATCCAGATATGCTTGCTGATATTGTAATAACAAGCATGAAAC 1444
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 360 TTCTCATTTCTAAGCTTCATCCAGATATGCTTGCTGATATAGTAATAACAAGCATGAAAC 419
Query 1445 ACTTGCCTAGTACCCCTCCCACATTGACAAGTTCAGTGGCTACTCCAGCAGATATTGTGG 1504
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 420 ACTTGCCTAGTACCCCTCCCACGTTGGCAAGTTCAGTGGCTACTCCAGCAGATATTGTGG 479
Query 1505 TATCTTCTTCTATAAATACCATTCATTCTCCGACTCCTCCGGCACAACTTCCTTTTGATC 1564
|||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 480 TATCTTCTTCTACAAATACCGTGCATTCTCCGACTCCTCCGGCACAACTTCCTTTTGATC 539
Query 1565 CAATCCTTCCTACTGGGTCATCGTTTTCCGAAGTGCCTAGCTTGAATAGCTCTGTTGCCG 1624
||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 540 CAATCCTTCCTGCTGGGTCATCGTTTTCCGAAGTGCCTAGCTTGAGTAGCTCGGTTGCCG 599
Query 1625 ACCCTAGACGCGACCCAAGAAGGGATCCCCGTCGCATGGATCCAAGGCGTTTAAATTCAC 1684
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 ACCCTAGACGCGACCCAAGAAGGGATCCCCGTCGCATGGATCCAAGGCGTTTAAATTCAT 659
Query 1685 CTGTGGGACCATCGTCACTGCCTGTAGGTGAGGGTAAAGAACCAGCTCCAACACAGAAGG 1744
||||||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||
Sbjct 660 CTGTGGGACCAACGTCACTCCCTGTAGGTGAGGGTAAAGAATCAGTTCCAGTACAGAAGG 719
Query 1745 ATATCTCTACCTTACTGAGTAAGCCAGTTTCAGTTCCTGCTGTCACGCCAGGGGCTACTG 1804
| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 720 ACATCTCTACCTTACTGAGTAAGCCAGTCTCAGTTTCTGCTGTCACGCCAGGGGCTACTG 779
Query 1805 GTTCAGTACATTCAACGGCAGTAGAGCGTAGCCAGAACAAGATGATGGGAAGTTCAGGAA 1864
|||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 780 GTTCTGTACATTCAACAGCAGTAGAGCTTAGCCAGAATAAGATGATGGGAAGTTCAGGAA 839
Query 1865 TCAGAATAATTAATCAGCCTGATTGCAGAGAGGACTTGTTGACTGTTCCCAATGAGTGTT 1924
||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 840 TCAGAATAATTGATCCGCCTGAATGCAGAGAGGACTTGTTGACTGTTCCCAATGAGTGTT 899
Query 1925 CTTACCCGTCAAAGGAAATATCATCCTTAGATGTTCCACTATCTCCTTGCAGAGATGATG 1984
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 900 CTTACCCGTCAAAGGAAATATCATCCTTAGATGTTCCACTATCTCCTTGCAGGGATGATG 959
Query 1985 AAGGCATCAGAGAGACAAAGTATTCAGGTTCTGAAACAATGTATGATTTGGATATGTCGT 2044
||||||||||||||||||||||||||| | | || | || || |||||||| ||
Sbjct 960 AAGGCATCAGAGAGACAAAGTATTCAG-TCC-----CA--G-AT--TT-GGATATGTTGT 1007
Query 2045 CTGTCCCAGATTTTGATCAACATTCGCCTTCAGCATCAGTCCCAGATTTTGATCAAGATC 2104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1008 CTGTCCCAGATTTTGATCAACATTCGCCTTCAGCATCAGTCCCAGATTTTGATCAAGATC 1067
Query 2105 CCCCTGCAGCATCAGACATTACTGCACCAGAAGAAAGCTATCGAGAGTTGGCACC-TGTT 2163
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1068 CCCCTGCAGCATCAGACATTACTGCACCAGAAGAAAGCTATCGAGAGTTGG-ACCCTGTT 1126
Query 2164 CCATCATATGTTGAACTTACCACAGAGCAAAGCAAAACTGTAGGAAAGTTGGCTATTGAA 2223
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 CCGTCATATGTTGAACTTACCACAGAGCAAAGCAAAACTGTAGGAAAGTTGGCTATTGAA 1186
Query 2224 CGGATAATCGAATCAAATAGACATGTCTTTGGGTTTGATTGTAACAAGATACGCATGGCA 2283
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 CGGATAATTGAATCAAATAGACATGTCTTTGGGTTTGATTGTAACAAGATACGCATGGCA 1246
Query 2284 TTAATTGCTCGATTGATTGCTAGAATCGATGCTGGCAATGATGTTGCAACCATACTAAGA 2343
|| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1247 TTGATTGCCCGATTGATTGCTAGAATCGATGCTGGCAGTGATGTTGCAACCATACTAAGA 1306
Query 2344 GAGCATATTAGTGTGGATCATCGAGATTTCAAGGGGCACGATCTTGTTTTACATGTTCTC 2403
|||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1307 GAGCTTATTAGTGTGGACCATCGAGAATTCAAGGGGCACGATCTTGTTTTACATGTTCTC 1366
Query 2404 TACCATCTGCATTCAATGGCGATGCTGGACACTGATGATTCCTCTCCCTATGCTACTATT 2463
|||||||||||||||||||| || |||||||| ||||| |||||| |||||||||| ||
Sbjct 1367 TACCATCTGCATTCAATGGCCATTCTGGACACAGATGAATCCTCTTTCTATGCTACTGTT 1426
Query 2464 TATGAAAATTTTCTCATATCAGTGGCAAGATCATTTCTGGATGCTCTTCCTGCTTCTGAC 2523
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1427 TATGAAAATTTTCTCATATCAGTGGCAAGATCATTTCTGGATGCGCTTCCTGCTTCTGAC 1486
Query 2524 AAGTCTTTTAGTAGACTTTTTGGAGAAGCTCCACATTTACCTGATTCTGCCATAAAGCTA 2583
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1487 AAGTCTTTTAGTAGACTTTTTGGAGAAGCTCCACATTTACCTGATTCTGCCATAAACCTA 1546
Query 2584 CTGGATGAACTCTGCTCCACTCGTCATGACCCAGTTGGAAGAGAAGTCTGTGATAGTGAG 2643
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 1547 CTGGATGAACTCTGCTCCACTCGTCATGACCCAGTTGGAAAAGAAGTTTGTGATAGTGAG 1606
Query 2644 CGTGTTACCCAAGGGCTTGGTGCTGTTTGGAGCTTAATTTTAGTGCGTCCAAATGAGCGA 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 CGTGTTACCCAAGGGCTTGGTGCTGTTTGGAGCTTAATTTTAGTGCGTCCAAATGAGCGA 1666
Query 2704 AAAGCATGCTTAGCTATAGCATTGAAGTGTTCTGTTCATTCTGAAGAAGATGTCCGCGCA 2763
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1667 AAAGCATGCTTAGCTATAGCATTGAAGTGTTCTGTTCATTCTGAAGAAGAGGTCCGCGCA 1726
Query 2764 AAAGCCATCCGACTTGTGAGGAAATTAGTCCCGGATAGCAATATGGTCACGAACAAACTA 2823
||||||||||||||||| | ||| | | | | |||| ||| | ||
Sbjct 1727 AAAGCCATCCGACTTGTCACGAAC--A-------A-A-CTATAT---CAC---C----TA 1765
Query 2824 TATCACCTAACATACACAGCAGAGCATGTTGAGCAATTTGCAACAGATATGTTGCTGACT 2883
| || || |||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1766 -A-CA--TA-CATAG-CAG-AG--CATGTTGAGCAATTTGCAACAGATATGTTGCTGACT 1816
Query 2884 GCTGTAAACTCTGAGACAGATCTCTCACAGACTGGATCAATTACAGAAGGAATAAAAACA 2943
|||||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||
Sbjct 1817 GCTGTAAACTCTGAGACAAATCTCTCACAGACTGCATCAACTGCAGAAGGAATAAAAATG 1876
Query 2944 GAGGCAAAAATCCAGATAACTTCGACAAGTGACTCTCTATGGTCTGGAAACTCCGACATT 3003
|||||||||| ||||||||||| ||||| ||| |||||| ||||||||||||||||||||
Sbjct 1877 GAGGCAAAAAGCCAGATAACTTTGACAACTGAGTCTCTAGGGTCTGGAAACTCCGACATT 1936
Query 3004 CACTCTCAGCAGGATCTACAAACTTCTCGTGATGTTTCAGTTATATCAATTTCTGAAGCT 3063
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1937 CCCTCTCAGCAGGATCTACAAACTTCTCGTGAAGTTTCAGTTATATCAATTTCTGAAGCT 1996
Query 3064 CAGAGACTGGTTTCTCTGTTCTTCGCTTTATGTAAAAAGAAACCTAGTCTCCTTCGACTT 3123
||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1997 CAGAGACTGATTTCTCTGTTCTTTGCTTTGTGTAAAAAGAAACCTAGTCTCCTTCGACTT 2056
Query 3124 GTCTTTGAAGTTTATGGGAGAGCTCCAAAAATGGTAAACCAGGATGTTTCA 3174
||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 2057 GTCTTTGAAGTTTATGGGAGAGCTCCAAAAATGGTAAACCAGGCT-TTTCA 2106
Score = 1206 bits (653), Expect = 0.0
Identities = 691/710 (97%), Gaps = 0/710 (0%)
Strand=Plus/Plus
Query 3164 AGGATGTTTCAATTCTTATTCCATTGCTTTCTTCACTCACTAAAGATGAGGTTTTGCCCA 3223
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2292 AGGATGTTTCAATTCTTATTCCATTGCTTTCTTCACTCACTAAAGACGAGGTTTTGCCCA 2351
Query 3224 TCTTTCCTCCCCTTCTTAATCTTCCGCCAGAAAAGTTTCAACTTGCACTTGCTCATATAT 3283
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2352 TCTTTCCTCCCCTTCTTAATCTTCCGCCTGAAAAGTTTCAACTTGCACTTGCTCATATAT 2411
Query 3284 TACAGGGTTCTGCTCACACAGGCCCTGCACTAACGCCTGCCGAGGTACTGATTGCTATCC 3343
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 2412 TACAGGGTTCTGCTCACACAGGCCCTGCACTTACACCTGCCGAGGTACTGATTGCTATCC 2471
Query 3344 ACGATATTGTTCCTGAGAAGGATGGGCCACCACTTAAAAAGATAACAGATGCATGTTCAG 3403
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2472 ACGATATTGTTCCTGAGAAGGATGGGCCACCACTTAAAAAGATAACAGATGCATGCTCAG 2531
Query 3404 CTTGCTTTGAACAACGCACTGTTTTCACGCAGCAAGTCTTAGCAAAGGCCCTCGGTCAGA 3463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2532 CTTGCTTTGAACAACGCACTGTTTTCACGCAGCAAGTCTTAGCAAAGGCCCTCGGTCAGA 2591
Query 3464 TGGTTGATCGAACACCTCTGCCTTTGCTCTTCATGCGAACGGTTATCCAGGCAATCGACG 3523
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2592 TGGTTGATCGAACTCCTCTGCCTTTACTCTTCATGCGAACGGTTATCCAGGCAATCGATG 2651
Query 3524 CTTTTCCAACACTGGTTGATTTTGTCATGGAAATTCTTTCCAAGCTGGTGAGAAAGCAGA 3583
||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct 2652 CTTTTCCAACACTAGTTGATTTTGTAATGGAAATTCTTTCCAAGTTGGTGAGGAAGCAGA 2711
Query 3584 TCTGGAGACTGCCAAAATTGTGGCCTGGCTTCTTAAAATGTGTGTCTCAGACAAAGCCGC 3643
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2712 TCTGGAGGCTGCCAAAATTGTGGCCTGGCTTCTTAAAATGTGTGTCTCAGACAAAGCCGC 2771
Query 3644 ATTCGTTCCCTGTTTTGTTGGAGTTACCAATGCCTCAACTTGAAAGTATCATGAAGAAGT 3703
|||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2772 ATTCTTTCCCTGTTTTATTGGAGTTACCAGTGCCTCAACTTGAAAGTATCATGAAGAAGT 2831
Query 3704 TTCCTGATCTAAGACCTTCCCTCACTGCTTATGCGAATCAGCCAACTATAAGAGCTTCTC 3763
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 2832 TTCCTGATCTAAGACCTTCCCTCACTGCTTATGCGAATCAGCCAACTATCAGATCTTCTC 2891
Query 3764 TACCAAATTCAGCTCTTTCAGTTCTTGGGCTTGACAATGGGCAAGATTCACGTTCACAAA 3823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2892 TACCAAATTCAGCTCTTTCAGTTCTTGGGCTTGACAATGGGCAAGATTCACGTTCACAAA 2951
Query 3824 TGCACCCGTCAGATGCAACTTCGTCTATTCATGGGGCGGCCTTAACGTGA 3873
||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2952 TGCACCCTTCAGATGCAACTTCGTCTATTCATGGGGCGGCCTTAACGTGA 3001
> AT1G27590.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein
of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis
thaliana protein match is: phosphatidylinositol 3- and
4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast
hits to 109 proteins in 38 species: Archae - 0; Bacteria -
0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). | chr1:9592128-9594586
FORWARD LENGTH=1634
Length=1634
Score = 1323 bits (716), Expect = 0.0
Identities = 744/758 (98%), Gaps = 0/758 (0%)
Strand=Plus/Plus
Query 1 ATGGCGGCTCCGGCTGCCGCGACAGCGAGGGCACAGGCGCTCTCTCTCCTCGCCGCTGCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 166 ATGGCGGCTCCGGCTGCCGCGACAGCGAGGGCACAGGCGCTCTCTCTCCTCGCCGCTGCT 225
Query 61 AATAACCACGGCGATTTGGCAGTGAAGCTCTCGTCTCTTAGACAGGTGAAGGAGATTTTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 AATAACCACGGCGATTTGGCAGTGAAGCTCTCGTCTCTTAGACAGGTGAAGGAGATTTTG 285
Query 121 CTGTCATTGGAGCCGTCTTTGTCTGCTGAGATTTTCCCCTATCTCGCAGAACTCCACTTG 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 CTGTCACTGGAGCCGTCTTTGTCTGCTGAGATTTTCCCCTATCTCGCAGAACTCCACTTG 345
Query 181 TCCCGTGAAATTCTAGTTCGCAAATCCCTTATCGAGATCATTGAAGAGGTTGGTTTGAGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 346 TCCCGTGAAATTCTAGTTCGCAAATCCCTTATCGAGATCATTGAAGAGGTTGGTTTGCGG 405
Query 241 ATGCTGGATCATTCTTATGTTCTAGTGAGTGTCTTACTAGTCTTATCAAGGGACGAGGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 ATGCTGGATCATTCTTATGTTCTAGTGAGTGTCTTACTAGTCTTATCAAGGGACGAGGAT 465
Query 301 CCAACTGTTGCCAAGAAATCCATTTCTGCTGGCACAACTTTCTTTTGCAACATCTTGGAG 360
||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||
Sbjct 466 CCAACTGTTGCAAAGAAATCTATTTCTGTTGGCACAACTTTCTTTTGCACCATCTTGGAG 525
Query 361 GAGATGGCAATGCAGTTCCATCACCGTGGTAAAGTTGATCGTTGGTGTGGGGAACTATGG 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 526 GAGATGGCAATGCAGTTCCATCACCGTGGGAAAGTTGATCGTTGGTGTGGGGAACTGTGG 585
Query 421 ACATGGATGGTTAAATTCAAAGATATTGTCTTTGCCACTGCATTGGAGCCTGGTTGTGTA 480
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 586 ACATGGATGGTTAAGTTCAAAGATACTGTCTTTGCCACTGCATTGGAGCCTGGTTGTGTA 645
Query 481 GGGGTGAAAGTTCTTGCTCTAAAGTTTATGGAGACATTTATTTTGCTCTTTACTCCTGAT 540
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 646 GGGGTGAAAGTTCTTGCTCTAAAGTTTATGGAGACTTTTATTTTACTCTTTACTCCTGAT 705
Query 541 GCATCTGATCCTGAGAAAGTTTCCAGCGAAGGAAGTAGACAGATGTTCAATATTTCCTGG 600
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 706 GCATCTGATCCTGAGAAAGCTTCCAGCGAAGGAAGTAGACATATGTTCAATATTTCCTGG 765
Query 601 CTTGCTGGCGGTCACCCCATTCTGAATCCAGCAACGCTCATGTCTGAAGCAAATAGGACA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 CTTGCTGGCGGTCACCCCATTCTGAATCCAGCAACGCTCATGTCTGAAGCAAATAGGACA 825
Query 661 TTTGGCATCTTAGTAGATTTCATACAGTCAGCTAATCGTTTACCGGGTGCATTGACGATA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 TTTGGCATCTTAGTAGATTTCATACAGTCAGCTAATCGTTTACCGGGTGCATTGACGATA 885
Query 721 TCTGTTATTAGTTGGTATGTTTCTGAATCCATCCCACT 758
||||||||||||||||||||||||||||||||||||||
Sbjct 886 TCTGTTATTAGTTGGTATGTTTCTGAATCCATCCCACT 923
> AT1G27570.1 | Symbols: | phosphatidylinositol 3- and 4-kinase
family protein | chr1:9575538-9582376 FORWARD LENGTH=1950
Length=1950
Score = 800 bits (433), Expect = 0.0
Identities = 651/752 (87%), Gaps = 31/752 (4%)
Strand=Plus/Plus
Query 1 ATGGCGGCTCCGGCTGCCGCGACAGCG-AGGGCACAGGCGCTCTCTCTCCTCGCCGCTGC 59
|||||||||||||||| ||||||| || |||| |||||||||| ||||||||||||||||
Sbjct 1 ATGGCGGCTCCGGCTGACGCGACAACGAAGGG-ACAGGCGCTCGCTCTCCTCGCCGCTGC 59
Query 60 TAATAACCACGGCGATTTGGCAGTGAAGCTCTCGTCTCTTAGACAGGTGAAGGAGATTTT 119
|| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct 60 CAAAAACCACGGCGATTTGGCGGTGAAGCTCTCGTCTCTTAAAGAGGTGAAGGAGATTTT 119
Query 120 GCTGTCATTGGAGCCGTCTTTGTCTGCTGAGATTTTCCCCTATCTC-GCAGAACTCCACT 178
||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| ||
Sbjct 120 GCTGTCATTGGAGCCGTCTTTGTCTGCTGAGATTTTCCCTTATCTTAG-AGAACTCTGCT 178
Query 179 TGTCCCGTGAAATTCTAGTTCGCAAATCCCTTATCGAGATCATTGAAGAGGTTGGTTTGA 238
|||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 179 TGTCCCCTGAAGTTTTAGTTCGCAGATCCCTTATCGAGATCATTGAAGAGGTTGGTTTGC 238
Query 239 GGATGCTGGATCATTCTTATGTTCTAGTGAGTGTCTTACTAGTCTTA-TCAAGG-GACGA 296
|||||||||| ||||||||||||||||||||||||||| || |||| | | || ||| |
Sbjct 239 GGATGCTGGAACATTCTTATGTTCTAGTGAGTGTCTTAATACACTTAGT-A-GGTGACAA 296
Query 297 GGATCCAACTGTTGCCA-AGAAATCCATTTCTGCTGGCACAACTTTCTTTTGCAACATCT 355
|||||||||||||| | ||||||| |||||| ||||||||||||||||| ||| |||||
Sbjct 297 TGATCCAACTGTTGC-AGAGAAATCTATTTCTACTGGCACAACTTTCTTTCGCAGCATCT 355
Query 356 TGGAGGAGATGGCAATGCAGTTCCATCACCGTGGTAAAGTTGATCGTTGGTGTGGGGAAC 415
||||| |||||| || |||||||||||||||||||||||||||||||||||||| | |||
Sbjct 356 TGGAGAAGATGGAAACGCAGTTCCATCACCGTGGTAAAGTTGATCGTTGGTGTGTG-AAC 414
Query 416 -TATGGACATGGATGGTTAAATTCAAAGATATTGTCTTTGCCACTGCATTGGA---G--- 468
||||||||| |||| ||| ||||||||| ||||||| || ||||||||| |
Sbjct 415 CTATGGACATTGATGCTTATGTTCAAAGATGCTGTCTTTAACATTGCATTGGATTTGGAG 474
Query 469 CCTGGT--TGT-GTAGGGGTGAAAGTTCTTGCTCTAAAGTTTATGGAGACATTTATTTTG 525
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCTGGTCGTGTAGTAGGGGTGAAAGTTCTTGCTCTAAAGTTTATGGAGACATTTATTTTG 534
Query 526 CTCTTTACTCCTGATGCATCTGATCCTGAGAAAGTTTCCA------GCGAAGGAAGTAGA 579
||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 535 CTCATTACTCCTCATGCATCTGATCCTGAGAAAGTTTCCACTTCCAGCGAAGGAAGTAGA 594
Query 580 CAGATGTTCAATATTTCCTGGCTTGCTGGCGGTCACCCCATTCTGAATCCAGCAACGCTC 639
|||||| |||||||||||| ||||||| ||||| |||||| ||||||| | || ||||
Sbjct 595 CAGATGATCAATATTTCCTCCCTTGCTGCCGGTCTCCCCATGCTGAATCTAACAGGGCTC 654
Query 640 ATGTCTGAAGCAAAT-AGGACATTTGGCATCTTAGTAGATTTCATACAGTCAGCTAATCG 698
|||||||||| |||| || ||| ||| | ||||| | |||| ||||| || ||| ||
Sbjct 655 ATGTCTGAAGTAAATCAG-ACACTTGTCCGCTTAGGATCTTTCTTACAGGCACCTACTC- 712
Query 699 TT-TACCGGGTGCATTGACGATATCTGTTATT 729
|| ||| || |||| || ||||| | ||||||
Sbjct 713 TTATACAGGATGCACTGCCGATAGCCGTTATT 744
Score = 132 bits (71), Expect = 3e-29
Identities = 78/81 (96%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 768 TAGCTTATCTTTCAGTCTTGCAGTGGTAGCAAGGAAGAGGCCTGTCCACTACAACACTGT 827
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 750 TAGCTTATCTTTCAGTCTTGCAGTGGTAGCAAGGAAGAGGCCTGTCCACTACGACACTGT 809
Query 828 CCTCTCTGTTCTGCTGGATTT 848
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Sbjct 810 CCTCTCTGTTCTG--GGATTT 828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 192942062778
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5