BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg313633 Length=846 Score E Sequences producing significant alignments: (Bits) Value AT1G29860.1 | Symbols: WRKY71, ATWRKY71 | WRKY DNA-binding prot... 1103 0.0 AT4G18170.1 | Symbols: WRKY28, ATWRKY28 | WRKY DNA-binding prot... 224 1e-57 > AT1G29860.1 | Symbols: WRKY71, ATWRKY71 | WRKY DNA-binding protein 71 | chr1:10454482-10455785 FORWARD LENGTH=982 Length=982 Score = 1103 bits (597), Expect = 0.0 Identities = 784/866 (91%), Gaps = 46/866 (5%) Strand=Plus/Plus Query 7 GATCATCATGTTGAGCA-GA--AGAACACA-CATTTAGAAGAAGTATCA-TTCACA-AGC 60 ||| ||||||||||||| | | |||||| | ||||||||||||| || |||| | ||| Sbjct 4 GATGATCATGTTGAGCACAATTATAACACATC-TTTAGAAGAAGTA-CACTTCA-AGAGC 60 Query 61 TTAAGTGATTGCTTACAAAGCTCATTAGTAATGGATTAT-A---A-T---GAA----TTC 108 ||||||||||||||||||||||||||||||||||||||| | | | ||| ||| Sbjct 61 TTAAGTGATTGCTTACAAAGCTCATTAGTAATGGATTATAACTCACTAGAGAAGGTCTTC 120 Query 109 -----C-CACCTTATAGTTCCCCTTTTCAACCGGTTTCACCGTCCGATATGGGCCATATA 162 | ||||||||||||||||||||||| |||||||| ||| | | | Sbjct 121 AAATTCTCACCTTATAGTTCCCCTTTTCAATCGGTTTCA----CCG---T----C----A 165 Query 163 GTAAACAATCCTTACTTAAATCTCAATTCGAATTCTCCAGTGGTCTCATCTTCCTCCAAT 222 |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 166 GTAAACAACCCTTACTTAAATCTCACTTCGAATTCTCCGGTGGTCTCATCTTCCTCCAAT 225 Query 223 GAAGCCGAGCTTAAAGAGAAC-CCTGACGATAAGAGTGACCGAATGGAGGATAACGAAGA 281 |||| ||||| |||||||||| || ||||||||||||||| ||||||||||||||||| Sbjct 226 GAAGGCGAGCCTAAAGAGAACACC-AACGATAAGAGTGACCAAATGGAGGATAACGAAGG 284 Query 282 CAACCAACATGGTGTTGGTAAAAGCTCCAAGCAATC-GACAAAACAAGGTaaaaagaaag 340 | ||| ||||||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct 285 CGACCTACATGGTGTTGGTGAAAGCTCCAAGCAA-CTGACAAAACAAGGTAAAAAGAAAG 343 Query 341 gagagaagaaagagagagaagCTAGGGTTGCATTTATGACCAAAAGCGAGATTGATCATC 400 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 344 GAGAGAAGAAAGAGAGAGAAGTTAGGGTTGCATTTATGACCAAAAGCGAGATTGATCATC 403 Query 401 TTGAAGATGGTTATAGATGGAGAAAATATGGACAAAAGGCCGTCAAGAACAGTCCTTATC 460 |||||||||||||||||||| |||||||||||||||| || || |||||||| ||||||| Sbjct 404 TTGAAGATGGTTATAGATGGCGAAAATATGGACAAAAAGCAGTGAAGAACAGCCCTTATC 463 Query 461 CAAGGAGTTACTATAGGTGCACAACACAGAAGTGTAACGTGAAGAAACGTGTAGAGAGAT 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 464 CAAGGAGTTACTATAGGTGCACAACACAGAAGTGTAACGTGAAGAAACGTGTAGAGAGAT 523 Query 521 CATTTCAAGATCCGTCGATCGTAATTACAACCTACGAAGGAAAACACAACCATCCGATCC 580 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 524 CGTTTCAAGATCCGTCGATCGTAATTACAACCTACGAAGGAAAACACAACCATCCGATCC 583 Query 581 CGTCGACGTTGAGAGGAACCGTGGCCGCTGAACATCTACTAGGCCACCGTGGTGGTGGAG 640 | ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 584 CATCGACGTTGAGAGGAACCGTGGCAGCTGAACATCTACTAGTCCACCGTGGTGGTGGAG 643 Query 641 GCGGTTTCCTCCATAGCTTCCCTCGTCACCATCAAGAGTTTCTCATGATGAAACATCCTC 700 || |||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 644 GCAGTTTACTCCATAGCTTCCCTCGTCACCATCAAGATTTTCTCATGATGAAACATTCTC 703 Query 701 TGGCCAATTATCAATCGGTGGGATCTATGTCGTACGAACATGGTCATGGGACCTCTAGTT 760 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 704 CGGCCAATTATCAATCGGTGGGATCTCTGTCGTACGAACATGGCCATGGGACCTCTAGTT 763 Query 761 ACAATTTTAATAATAATCAACCAGTTGTTGACTATGGCCTTCTTCAGGACATTCTTCCTT 820 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct 764 ACAATTTTAATAATAATCAACCAGTTGTTGACTATGGTCTTCTTCAGGACATTGTTCCTT 823 Query 821 CAATGTTCTCCAAGCACGAATCTTGA 846 |||||||||||||| |||| |||||| Sbjct 824 CAATGTTCTCCAAGAACGAGTCTTGA 849 > AT4G18170.1 | Symbols: WRKY28, ATWRKY28 | WRKY DNA-binding protein 28 | chr4:10061373-10062841 FORWARD LENGTH=1242 Length=1242 Score = 224 bits (121), Expect = 1e-57 Identities = 202/241 (84%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 345 gaagaaagagagagaagCTA-GGGT-TGCATTTATGACCAAAAGCG-AGATTGATCATCT 401 ||||||| | |||| ||| | | || | | |||||||| ||||| | || |||||||||| Sbjct 591 GAAGAAACAAAGAG-AGCCACGAGTCT-CGTTTATGACTAAAAGTGAAG-TTGATCATCT 647 Query 402 TGAAGATGGTTATAGATGGAGAAAATATGGACAAAAGGCCGTCAAGAACAGTCCTTATCC 461 ||||||||||||||||||||||||||| || |||||||| || || || || |||||||| Sbjct 648 TGAAGATGGTTATAGATGGAGAAAATACGGCCAAAAGGCTGTAAAAAATAGCCCTTATCC 707 Query 462 AAGGAGTTACTATAGGTGCACAACACAGAAGTGTAACGTGAAGAAACGTGTAGAGAGATC 521 ||||||||||||||| || |||||||| ||||| |||||||||||||| || |||||||| Sbjct 708 AAGGAGTTACTATAGATGTACAACACAAAAGTGCAACGTGAAGAAACGAGTGGAGAGATC 767 Query 522 ATTTCAAGATCCGTCGATCGTAATTACAACCTACGAAGGAAAACACAACCATCCGATCCC 581 || |||||||| || | || |||||||| ||||| || |||||||||| ||||| || Sbjct 768 GTTCCAAGATCCAACGGTTGTGATTACAACTTACGAGGGTCAACACAACCACCCGATTCC 827 Query 582 G 582 | Sbjct 828 G 828 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41242234687 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5