BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313733
Length=1896
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTIN... 3070 0.0
AT2G34940.1 | Symbols: VSR5, VSR3;2, BP80-3;2 | VACUOLAR SORTIN... 1352 0.0
AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr... 628 4e-179
> AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING
RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=1896
Length=1896
Score = 3070 bits (1662), Expect = 0.0
Identities = 1820/1898 (96%), Gaps = 4/1898 (0%)
Strand=Plus/Plus
Query 1 ATGACTTTGATTCATAAAGGAGCCATCTTGGCTCTGTTTCTAGCGTTGACTATGGTGGTC 60
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCTTTGATTCATAAAGGAGCCACCTTGGCTCTGTTTCTAGCGTTGACTATGGTGGTC 60
Query 61 AACGGAGTTTTCGGGAGATTCATCGTGGAGAAGAGTAGCGTCACGATTCTAAACCCTTTG 120
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 61 AACGGAGTTTTCGGGAGATTCATCGTTGAGAAGAGTAGCGTGACGATTCTAAACCCTTTG 120
Query 121 GCAATGCGGTCTAAACACGATGCAGCCATTGCTAACTTCGGTGTTCCTAATTACGGTGGT 180
|||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 121 GCAATGCGGTCTAAGCACGACGCAGCCATTGCTAACTTCGGTGTTCCTAACTACGGTGGT 180
Query 181 TACATGATCGGTTCCGTTGTTTACGCTGGTCAAGGAGCTTATGGATGTGACTCTTTTGAT 240
||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 181 TACATGATCGGCTCCGTCGTTTACGCCGGTCAAGGAGCTTATGGATGTGACTCTTTTGAC 240
Query 241 AAAACTTTCAAACCCAAATTCCCTCGTCCTACCATTTTAATCATCGATCGTGGAGAGTGC 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 241 AAAACTTTCAAACCCAAATTCCCTCGTCCTACCATTTTGATCATCGATCGTGGAGAGTGT 300
Query 301 TACTTTGCATTAAAGGTATGGAACGGTCAACAATCCGGTGCAGCAGCAGTTTTAGTAGCT 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 301 TACTTTGCATTAAAGGTATGGAACGGTCAACAATCCGGTGTAGCAGCAGTTTTAGTAGCT 360
Query 361 GATAACGTTGATGAGCCATTGATAACTATGGATTCACCTGAGGAATCCAAAGAAGCTGAT 420
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 361 GATAACGTCGATGAGCCATTGATAACAATGGATTCACCTGAGGAATCCAAAGAAGCTGAT 420
Query 421 GACTTTATAGAGAAACTCAACATTCCTTCGGCTTTAATCGACTTTTCTTTCGCCAATACA 480
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 421 GACTTTATAGAGAAACTCAACATTCCATCGGCTTTAATAGACTTTTCTTTCGCCAATACT 480
Query 481 CTCAAGCAAGCTCTTAAAAAAGGCGAGGAAGTAGTCCTGAAGATAGACTGGAGTGAGTCA 540
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 481 CTCAAGCAAGCTCTTAAGAAAGGTGAGGAAGTAGTCCTGAAGATAGACTGGAGTGAGTCA 540
Query 541 TTACCTCATCCGGATGAGAGAGTTGAGTATGAGTTATGGACTAACACGAATGATGAGTGT 600
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 541 TTACCTCATCCGGATGAGAGAGTTGAGTATGAGCTATGGACTAACACGAACGATGAGTGT 600
Query 601 GGTGCGCGGTGCGATGAGCAGATGAATTTTGTCAAGAACTTCAAAGGGCATGCGCAGATT 660
||||| ||||| ||||||||||||||||| || || ||||||||||| ||||||||||||
Sbjct 601 GGTGCACGGTGTGATGAGCAGATGAATTTCGTAAAAAACTTCAAAGGACATGCGCAGATT 660
Query 661 CTTGAAAAAGGAGGATACTCTTTGTTCACACCTCATTACATTACATGGTTTTGTCCTAAA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CTTGAAAAAGGAGGATACTCTTTGTTCACACCTCATTACATTACATGGTTTTGTCCTAAA 720
Query 721 GATTATGTTTCTAGCAATCAATGTAAGTCTCAGTGTATCAACCAAGGGAGGTATTGTGCT 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 721 GATTATGTTTCTAGCAATCAATGTAAGTCTCAGTGTATAAACCAAGGGAGGTATTGTGCT 780
Query 781 CCTGACCCTGAACAAGACTTTGGAGATGGATACGATGGCAAAGACATCGTTTTCGAGAAT 840
||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||||
Sbjct 781 CCTGACCCTGAACAAGACTTTGGTGATGGATACGATGGTAAAGACATTGTCTTCGAGAA- 839
Query 841 C-TGAGACAGTTATGTGTTCATAGAGTAGCAAAAGAGAATAACCGGTCTTGGGTTTGGTG 899
| |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 840 CTTGAGACAGTTGTGTGTTCATAAAGTAGCTAAAGAGAATAACCGGTCTTGGGTTTGGTG 899
Query 900 GGACTATGTGACTGATTTTCACATCAGGTGTTCAATGAAGGAGAAGAAGTATAGCAAAGA 959
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 900 GGACTATGTGACTGATTTTCACATTAGATGTTCAATGAAGGAGAAGAAGTATAGCAAAGA 959
Query 960 ATGTGCTGAGAAAGTTGTTGAATCTCTCGGTTTGCCACTTGACAAGATCAAGAAATGCAT 1019
|||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 960 ATGTGCAGAGAGAGTTGTTGAATCTCTAGGTTTGCCACTTGACAAGATCAAGAAATGTAT 1019
Query 1020 TGGTGATCCTGAAGCTGATGTGGAGAATGAAGTTTTGAAAGCTGAGCAAGCGCTTCAGGT 1079
|||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1020 TGGTGATCCTGATGCTAATGTGGAGAATGAAGTTTTGAAAGCTGAGCAAGCACTTCAGGT 1079
Query 1080 AGGACAAGGTGACCGCGGGGATGTCACAATCTTGCCAACATTGATCGTCAACAATGCTCA 1139
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AGGACAAGGTGACCGCGGAGATGTCACAATCTTGCCAACATTGATCGTCAACAATGCTCA 1139
Query 1140 ATACCGCGGTAAACTCGAGAGAAATGCAGTACTTAAGGCTATATGTTCAGGATTTAAGGA 1199
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1140 ATACCGCGGTAAACTTGAGAGAAATGCAGTACTTAAGGCTATATGTTCTGGATTCAAGGA 1199
Query 1200 AAGAACTGAA-CCGGGAATCTGTCTAAGTGGAGATATCGAAACAAACGAATGTCTCGAAG 1258
|||||| ||| ||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1200 AAGAACCGAACCCGGG-ATCTGTCTAAGTGGAGATATTGAAACAAATGAATGTCTCGAAG 1258
Query 1259 CAAATGGAGGGTGTTGGCAGGACATGAAGTCTAATGTAACAGCTTGCAAGGACACATTTA 1318
||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||
Sbjct 1259 CAAATGGAGGGTGTTGGGAGGACAAGAAGTCCAATGTAACAGCTTGCAAGGACACATTTA 1318
Query 1319 GGGGAAGAGTCTGTGAATGCCCTGTTGTAAATGGTGTGCAGTATAAAGGAGATGGCTATA 1378
| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct 1319 GAGGAAGAGTCTGTGAATGCCCTGTTGTGAATGGTGTACAGTATAAAGGAGATGGATATA 1378
Query 1379 CCTCATGTGAACCTTATGGCCCTGCCAGATGCTCGATTAATCAAGGAGGTTGCTGGTCTG 1438
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1379 CATCATGTGAACCTTATGGCCCTGCAAGATGCTCGATTAACCAAGGAGGTTGCTGGTCTG 1438
Query 1439 AAACCAAAAAGGGCTTAACTTTCTCCGCTTGCTCGAACTTGGAGACATCGGGATGTCGCT 1498
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1439 AAACCAAAAAGGGCTTAACTTTCTCGGCTTGCTCGAACTTGGAGACATCGGGATGTCGCT 1498
Query 1499 GCCCTCCAGGGTTTAAAGGAGATGGTCTTAAATGTGAAGACATTGATGAATGTAAGGAAC 1558
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1499 GCCCTCCAGGGTTTAAAGGAGATGGTCTTAAATGTGAAGACATTGATGAGTGTAAGGAGC 1558
Query 1559 AATCAGCTTGTCAATGTGATGGATGCAACTGTAAGAACAACTGGGGAGGCTTTGAATGCA 1618
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1559 AATCAGCTTGTCAATGTGATGGATGCAACTGTAAGAACAAATGGGGAGGCTTTGAATGCA 1618
Query 1619 AATGCTCTGGAAATCGTCTCTACATGAAAGAACAAGACACTTGTATTGAGAGAAGCGGAT 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 AATGCTCTGGAAATCGTCTCTACATGAAAGAACAAGACACTTGTATTGAGAGAAGCGGAT 1678
Query 1679 CAAGAATCGGATGGTTCTTTACGTTTGTGATTCTAGCTGCAGTTGCAAGCATATGTGTAG 1738
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct 1679 CAAGAATCGGATGGTTCCCTACATTTGTGATTCTAGCTGCAGTTGCAAGCATATGTGTAG 1738
Query 1739 GTGGTTACGTATTCTACAAGTATCGTCTCAGGTCTTATATGGATTCAGAAATCATGGCGA 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GTGGTTACGTATTCTACAAGTATCGTCTCAGGTCTTATATGGATTCAGAAATCATGGCGA 1798
Query 1799 TTATGTCTCAGTACATGCCATTGGAGAGCCAAAACACAACCGATCCAATGACCGGTGAAT 1858
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1799 TTATGTCTCAGTACATGCCATTAGAGAGCCAAAACACAACCGATCCAATGACTGGTGAAT 1858
Query 1859 CTCAACAGCAACAGCTGAGATTAACTTCTGCAGCTTAA 1896
||||||| |||||||||||||||||||||||||| |||
Sbjct 1859 CTCAACACCAACAGCTGAGATTAACTTCTGCAGCCTAA 1896
> AT2G34940.1 | Symbols: VSR5, VSR3;2, BP80-3;2 | VACUOLAR SORTING
RECEPTOR 5 | chr2:14740468-14743417 FORWARD LENGTH=1989
Length=1989
Score = 1352 bits (732), Expect = 0.0
Identities = 1496/1858 (81%), Gaps = 80/1858 (4%)
Strand=Plus/Plus
Query 14 ATAAAGGAGCCATCTTGGCTCTGTTTCTAGCGTTGA-C-T-ATGGTGGTCAACGGAGTTT 70
|||||||| || ||||||||||| |||||||||||| | | ||||||||||||| ||||
Sbjct 43 ATAAAGGAACCGTCTTGGCTCTGATTCTAGCGTTGACCATGGTGGTGGTCAACGG-GTTT 101
Query 71 TC-GGGAGATTCATCGTGGAGAAGAGTAGCGTCACGATTCTAAACCCTTTGGCAATGCGG 129
|| ||||||| |||||||||| || ||| | ||| | || ||| | | || |||| ||
Sbjct 102 TCATCGAGATTCTTCGTGGAGAAAAGCAGCTTGACGGTCCTTAACTCATGGGAAATG-GG 160
Query 130 -TCTAAACACGATGCAGCCATTGCTAACTTCGGTGTTCCTAATTACGGTGGTTACATGAT 188
|||| ||||| || ||||| || ||||| ||| | || || ||||| |||| ||||||
Sbjct 161 AGCTAAGCACGACGCGGCCATAGCAAACTTTGGTCTCCCAAAGTACGGCGGTTTCATGAT 220
Query 189 CGGTTCCGTTGTTTACGCTGGTCAAGGA-GCTTATGGATGTGACTCTTTTGATAAAACTT 247
||| || || || ||||| || ||| || ||||| ||||| ||||||| | ||||| |
Sbjct 221 CGGCTCTGTGGTCTACGCAGGCCAA-GACGCTTACGGATGCAACTCTTTCAACAAAACCT 279
Query 248 TCAA-ACCCAAATTC-CCTCGTCCTACCATTTTAATCATCGATCGTGGAGAGTGCT-ACT 304
|||| | || || || ||| ||| | ||| | |||| |||||||||| ||| | |||
Sbjct 280 TCAATA-CC-AAGTCTCCTTATCCCAAAATTCTCCTCATTGATCGTGGAGTGTG-TAACT 336
Query 305 TTGCATTAAAGGTATGGAACGGTCAACAATCCGGTGCAGCAGCAGTT-TTAGTAGCTGAT 363
|||| || ||| |||||||||| ||||||||||| ||||| || ||| || |||| |||
Sbjct 337 TTGCTTTGAAGATATGGAACGGACAACAATCCGGCGCAGCGGCTGTTCTT-TTAGCAGAT 395
Query 364 AACGTTGATGAGCCATTGATAACTATGGATTCACCTGAGGAATCCAAAGAAGCTGATGAC 423
||| ||| ||||||||||||||| |||||| |||| | | || |||| | ||||
Sbjct 396 AACATTGTTGAGCCATTGATAACAATGGATACACCCCAAG-AT-----GAAGATCCTGAC 449
Query 424 TTTATAGAGAAACTCAACATTCCTTCGGCTTTAATCGACTT--TTCTTTCGCCAATA-CA 480
|||||||| ||| |||| || || || ||||||||| ||| ||||||| ||| |
Sbjct 450 TTTATAGACAAAGTCAAGATCCCATCAGCTTTAATC--CTTCGCTCTTTCGGTGATAGC- 506
Query 481 CTCAAGCAAGCTCTTAAAAAAGGCGAGGAAGTAGTCCTGAAGATAGACTGGAGTGAGTCA 540
|||||| |||||||||||| ||| ||||| ||| || ||||||| || |||||||||||
Sbjct 507 CTCAAGAAAGCTCTTAAAAGAGGTGAGGAGGTAATCTTGAAGATGGATTGGAGTGAGTC- 565
Query 541 T-TACCTCATCCGGATGAGAGAGTTGAGTATGAGTTATGGACTAACACGAATGATGAGTG 599
| |||| | || ||||||||||||||||||||| ||||| |||| || |||||||| ||
Sbjct 566 TATACCAAACCCTGATGAGAGAGTTGAGTATGAGCTATGGGCTAATACTAATGATGAATG 625
Query 600 TGGTGCGCGGTGCGATGAGCAGATGA-ATTTTGTCAAGAACTTCAAAGGGCAT-GCGCAG 657
||||| | |||||| | ||||| | |||| | |||||||| ||||| || || |||
Sbjct 626 TGGTGTACACTGCGATAAACAGAT-AGATTTCATTAAGAACTT-TAAGGGAATGGCTCAG 683
Query 658 ATTCTTGAAAAAGGAGGATACT-CTTTGTTCACACCTCATTACATTACATGGTTTTGTCC 716
|||||||||||||| || || | ||||||||| |||||| |||||| | ||| |||||||
Sbjct 684 ATTCTTGAAAAAGGCGGTTA-TACTTTGTTCAGACCTCACTACATTTCTTGGGTTTGTCC 742
Query 717 TAAAGATTATGT-TTC-TAGCAATCAATGTAAGTCTCAGTGTATCAACCAAGGGAGGTAT 774
||||| | | | | |||||| || |||| | |||||||||| |||||||||||||||
Sbjct 743 CAAAGA-GCT-TCTACTTAGCAAGCAGTGTAGGACTCAGTGTATAAACCAAGGGAGGTAT 800
Query 775 TGTGCTCCTGACCCTGAA-CAAGACTTTGGAGATGGATACGATGGCAAAGACATCGTTT- 832
||||||| ||| || || ||||| |||| ||||||||| |||| |||||| ||||||
Sbjct 801 TGTGCTCTTGATACT-AAGCAAGAATTTGAAGATGGATATAATGGGAAAGACGTCGTTTA 859
Query 833 TCGAGAATCTGAGACAGTTATGTGTTCATAGAGTAGCAAAAGAGAATAAC-CGGTCTTGG 891
| ||||||||||| |||||||||||||||| |||||| || ||||| ||| | ||||||
Sbjct 860 T-GAGAATCTGAGGCAGTTATGTGTTCATAAAGTAGCTAAGGAGAAGAACAC-TTCTTGG 917
Query 892 GTTTGGTGGGACTATGTGACTGATTTTCACATCAGGTGTTCAATGAAGGAGAAGAAGTAT 951
|||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||
Sbjct 918 GTTTGGTGGGACTATGTGACAGATTTTAACATCAGGTGTTCTATGAAGGAGAAGAAATAC 977
Query 952 AGCAAAGAATGTGCTGAGA-AAGTTGTTGAATCTCTCGGTTTGCCACTTGACAAGATCAA 1010
|||| ||||||||| |||| | |||| ||||||||||| || | ||||| ||||||||
Sbjct 978 AGCAGAGAATGTGCAGAGACTA-TTGTGGAATCTCTCGGGCTGTCTCTTGAGAAGATCAA 1036
Query 1011 GAAATGCATTGGTGATCCTGAAGCTGATGTGGAGAATGAAGTTTTGAAAGCTGAGCAAGC 1070
||||||||||||||||||||| |||||||| |||||||||||| | ||||| ||| ||||
Sbjct 1037 GAAATGCATTGGTGATCCTGATGCTGATGTAGAGAATGAAGTTCTAAAAGCCGAGGAAGC 1096
Query 1071 GCTTCAGGTAGGACAAGGTGAC-CGCGGGGAT-GTCACAATCTTGCCAACATTGATCG-T 1127
||||| |||| |||| || || || || || |||||||| || ||||| || | |
Sbjct 1097 TTTTCAGTTAGGCCAAGA-GAATCGTGGC-ATTGTTACAATCTTTCCTACATTAAT-GAT 1153
Query 1128 CAACAATGCTCAATACCGCGGTAAACTCGAGAGAAATGCAGTACTTAAGGCTATATGTTC 1187
||||||||||||||| ||||||||||| ||||||| || || || ||||||||||||||
Sbjct 1154 CAACAATGCTCAATATCGCGGTAAACTGGAGAGAACCGCGGTGCTGAAGGCTATATGTTC 1213
Query 1188 AGGATTTAAGGAAAGAACTGAACCGGGAATCTGTCT-AAGTGGAGATATCGAAACAAACG 1246
|||||| ||||||||||| |||||| ||| ||| | || | |||||| || || || |
Sbjct 1214 AGGATTCAAGGAAAGAACAGAACCGTCAATATGTTTGAATTC-AGATATAGAGACCAATG 1272
Query 1247 AATGTCTCGA-AGCAAATGGAGGGTGTTGGCAGGACATGAAG-TCTAATGTAACAGCTTG 1304
||||||| | || ||||||||| |||||||| |||| ||| || |||||||| |||||
Sbjct 1273 AATGTCTT-ATAGAAAATGGAGGATGTTGGCAAGACAA-AAGATCCAATGTAACTGCTTG 1330
Query 1305 CAAGGACACATTTAGGGGAAGAGTCTGTGAATGCCCTGTTGTAAATGGTGTGCAGTATAA 1364
|||||||||||||||||||||||| ||||| ||||| ||||| ||||||| || |||||
Sbjct 1331 CAAGGACACATTTAGGGGAAGAGTATGTGAGTGCCCGGTTGTCGATGGTGTTCAATATAA 1390
Query 1365 AGGAGATGGCTATACCTCATGTGAACCTTATGGCCCTGCCAGATGCTCGATTAATCAA-G 1423
||||||||| |||||||| || |||||||||| ||||| ||||| || || || ||| |
Sbjct 1391 AGGAGATGGTTATACCTCCTGCAAACCTTATGGACCTGCGAGATGTTCAATGAA-CAATG 1449
Query 1424 GAGGTTGCTGGTCTGAAACCAAAAAGGG-CTTAACTTTCTCCGCTTGCTC-GAACTTGGA 1481
||| |||||||||||||||| |||||| || ||||||||| |||| || || || ||
Sbjct 1450 GAGACTGCTGGTCTGAAACCAGAAAGGGTCT-AACTTTCTCTTCTTGTTCAGA-CTCAGA 1507
Query 1482 GACATCGGGATGTCGCTGCCCTCCAGGGTTTAAA-GGAGATGGTCTTAAATGTGAAGACA 1540
|||||| |||||||| ||||||| ||| ||| ||||||||||| |||||||||||||
Sbjct 1508 GACATCAGGATGTCGTTGCCCTCTAGG-TTTCCTTGGAGATGGTCTAAAATGTGAAGACA 1566
Query 1541 TTGATGAATGTAAGGA-ACAATCAGCTTGTCAATGTGATGGATGCAACTGTAAGAACAAC 1599
|||||||||| || || | ||||||||||| |||||||||| ||||| || ||||||||
Sbjct 1567 TTGATGAATGCAAAGAGA-AATCAGCTTGTAAATGTGATGGCTGCAAATGCAAGAACAAT 1625
Query 1600 TGGGGAGGCTTTGAATGCAAATGCTCTGGA-AATCGTCTCTACATGAAAGAACAAGACAC 1658
|||||||| | |||||||||||| ||| | ||| || |||||||||||||| | |||||
Sbjct 1626 TGGGGAGGATATGAATGCAAATGTTCTA-ACAATAGTATCTACATGAAAGAAGAGGACAC 1684
Query 1659 TTGTATTGAGAGAAGC-G-G-ATCAAGAATCGGATGGTTCTTTACGTTTGTGATTCTAGC 1715
|||||| |||||||| | | |||||||| | || |||| || || ||||| ||||| |
Sbjct 1685 TTGTATCGAGAGAAGAAGTGGATCAAGAAGCAGAGGGTTGTTCACAATTGTGGTTCTAAC 1744
Query 1716 TGC-AGTTGCAAGCATATGTGTAGGTGGTTACGTATTCTACAAGTATCGTCT-CAGGTCT 1773
|| | | || | || | | |||||| ||| ||||||||||||| | ||| ||| ||
Sbjct 1745 CGCCA-TCGCGGGTATCTCTTTAGGTGCTTATATATTCTACAAGTACCATCTTCAG-TCA 1802
Query 1774 TATATGGATTCAGAAATCATGGCGATTATGTCTCAGTACATGCCATTGGAGAGCCAAA 1831
|| ||||||||||| ||| || | ||||||||||||||||| ||| | || |||||||
Sbjct 1803 TACATGGATTCAGAGATCGTGTCCATTATGTCTCAGTACATACCACTCGATAGCCAAA 1860
> AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr4:10875233-10878729
FORWARD LENGTH=2405
Length=2405
Score = 628 bits (340), Expect = 4e-179
Identities = 1249/1670 (75%), Gaps = 133/1670 (8%)
Strand=Plus/Plus
Query 233 CTTTTGATAAAACTTTCAAACCCAAATTCCCTCGTCCTACCATT-TTAATCATCGATCGT 291
|||||| |||||| ||||| ||||| || |||||||| || ||| | || | ||||||
Sbjct 570 CTTTTGGTAAAACCTTCAAGCCCAAGTTTCCTCGTCCCACTATTCTGCTTC-TTGATCGT 628
Query 292 GGAGAG-TGCTACTTTGCATTAAAGGTATGGAACG-GTCAACAATCCGGTGCAGCAGCAG 349
|||| | ||||||||||| ||||| | ||| ||| | || ||| | || || || ||||
Sbjct 629 GGAG-GTTGCTACTTTGCCTTAAAAGCGTGGCACGCG-CAGCAAGCAGGCGCGGCTGCAG 686
Query 350 TT-TTAGTAGCTGATAACGTTGATGAGCCATTGATAACTATGGATTCACCTGAGGA-ATC 407
|| || || || ||||| || || ||||||||| | || ||||||||||| ||||| |
Sbjct 687 TTCTT-GTGGCGGATAATGTAGACGAGCCATTGTTGACAATGGATTCACCAGAGGAGA-G 744
Query 408 CAAAGAAGCTGATGACTTT-ATAGAGAAACTCAAC-ATTCCTTCGGCT-TTAATCGACT- 463
|||||| || |||| ||| |||||||| || ||| || || |||| | |||||||| |
Sbjct 745 CAAAGATGCGGATG-GTTTCATAGAGAAGCT-AACAATCCCATCGG-TGTTAATCGA-TA 800
Query 464 TTTC-TTTCGCCA-ATACACTCAAG-CAA-GCTCTTAAAAAAGGCGAGGAA-GTAGTCCT 518
|| ||| | | || ||| ||| ||| | | || | ||||| || || |||| |
Sbjct 801 AATCATTT-G-GAGAT-GACTTAAGACAAGGGT-TTCAGAAAGG-GAAAAACATAGTTAT 855
Query 519 GAAGA-TAGACTGGAGTGAGTCAT-TACCTCATCCGGATGAGAGAGTTGAGTATGAGTTA 576
|| | |||| ||||| ||||| | | |||||||| ||| ||||||| || |||||| |
Sbjct 856 -AAAACTAGATTGGAGAGAGTC-TGTGCCTCATCCTGATAAGAGAGTAGAATATGAGCTG 913
Query 577 TGGACTAACACG-AATGATGAGTGTGGTGCGCGGTGCGATGAGCAGATGAATTTTGTCAA 635
|||||||| | | ||||||||||||||||| ||||| ||||| |||||| | ||||||||
Sbjct 914 TGGACTAATA-GCAATGATGAGTGTGGTGCACGGTGTGATGAACAGATGGACTTTGTCAA 972
Query 636 GAACTTCAAAGGGCATGCGCAGATTCTTGAAAAAGGAGG--ATACTCTTTGTTCACACCT 693
|||||| ||||| ||||| ||||| || |||||||| || |||| | ||| || ||
Sbjct 973 GAACTTTAAAGGTCATGCTCAGATACTCGAAAAAGGCGGTTATAC-C-GCGTTTACGCCG 1030
Query 694 CATTACATTACATGGTTTTGTCC--TAAAGATTATGTTTCTAG-CAATCAATGTAAGTCT 750
||||| ||||| |||||||| || | || |||| | || | | || |||||||||
Sbjct 1031 CATTATATTACTTGGTTTTGCCCTTTTCAGTTTAT-AAAC-AGTCCA-CATTGTAAGTCT 1087
Query 751 CAGTGTATCAACCAAGGGAGGTATTGTGCTCCTGACCCTGAACAAGACTTT-GGAGATGG 809
|||||||| ||||| ||||||||||||||||||||||||| | | | ||| |||| ||
Sbjct 1088 CAGTGTATAAACCATGGGAGGTATTGTGCTCCTGACCCTG-AGGATAATTTCAGAGAAGG 1146
Query 810 ATACGATGGCAAAGACATCGT-TTTCGAGAATCTGAGACAG-TTATGTGTTCATAGAGTA 867
|| || || ||||| | || || ||||||||||||||| || ||||| ||||||||
Sbjct 1147 GTATGAAGGGAAAGATGTTGTGCTT-GAGAATCTGAGACAGCTT-TGTGTGCATAGAGTT 1204
Query 868 GCAAAAGAGAATAACCGGTCTTGGGTTTGGTGGGACTATGTGACTGATTTTCACATC-AG 926
|| || |||| || | || |||||||||||||||| ||||| || |||||||| || |
Sbjct 1205 GCGAATGAGAGTAGCAGGCCTTGGGTTTGGTGGGATTATGTTACCGATTTTCA-TTCTCG 1263
Query 927 GTGTTCAATGAAGGAGAAGAAGTATAGCAAAGAATGTGCTGAGA---A--AGT-TGTT-- 978
||||| |||||||||||||| || |||| ||| |||||||||| | | | | ||
Sbjct 1264 ATGTTCGATGAAGGAGAAGAAATACAGCATAGATTGTGCTGAGAGTTATGAATCT-TTAA 1322
Query 979 GA-ATCTCTC-GGTTTGCC-ACTTGACAAGATCAAGAAATGCATTGGTGATCCTGAAGCT 1035
|| | | || | ||| || | |||| ||||||||||||||||||||||||||||| |||
Sbjct 1323 GACTTTTTTCAGATTTACCTA-TTGAGAAGATCAAGAAATGCATTGGTGATCCTGAGGCT 1381
Query 1036 GATGTGGAGAATGAAGTTTTGA-AAGCTGAGCAAGCG-CTTCAGGTAGGACAAGGTGACC 1093
||| ||||| ||||| ||| || ||||||||| || ||| | || | ||| |||
Sbjct 1382 GATACAGAGAACCAAGTTCTGAGAA-CTGAGCAAGTATCT-CAGATTGGCCGAGGAAACC 1439
Query 1094 GCGGG-GATGTCACAATCTTGCCAACATT-GATCGTCAACAATGCTCAATACCGCGGTAA 1151
| ||| ||||| || || ||||||||||| | || |||| || |||||||| || || |
Sbjct 1440 G-GGGAGATGTTACGATATTGCCAACATTAG-TCATCAATAACGCTCAATATCGAGGGAG 1497
Query 1152 ACTCGAGAGAAATGCAGTACTTAA-GGCTATATGTTCAGGATTTAAGGAAAGAACTGAAC 1210
| | ||||||| || || |||| ||| ||||| | || ||||| |||| | | || |
Sbjct 1498 ATTGGAGAGAACCGCGGTT-TTAAAGGCGATATGCGCTGGTTTTAATGAAACATCGGAGC 1556
Query 1211 CGGGAATCTGTCT-AAGTGGAGATATCGAAACAAACGAATGTCTCGAAG-CAAATGGAGG 1268
| | || || || || || | | || ||||| || || || ||| ||| ||| ||
Sbjct 1557 CTGCCATTTG-CTTAAACACAGGTCTAGAGACAAATGAGTGCCTTGAAAACAA-TGGTGG 1614
Query 1269 GTGTTGGCAGGACATGAA-GTCTAATGTAACAGCTTG-CAAGGACACATTTAGGGGAAGA 1326
|| |||||||| | || | | || | || ||||| |||| ||||||| || ||||||
Sbjct 1615 TTGCTGGCAGGATACAAAAG-CAAACATCACTGCTTGTCAAG-ACACATTCAGAGGAAGA 1672
Query 1327 GTCTGTGAATGCCCTGTTGTAAATGGTGTGCAGTATAAAGGAGATGGCTATACCTCATGT 1386
|||| || || || |||||||| ||||| || ||||||||||| || || || ||||||
Sbjct 1673 CTCTGCGAGTGTCCGGTTGTAAAAGGTGTTCAATATAAAGGAGACGGGTACACTTCATGT 1732
Query 1387 GA-ACCTTATGGCCCTGCCAGATGCT-CGATTAATCAA-GGAGGTTGCTGGTCTGAAACC 1443
| ||||||||| ||||| || || | | || || ||| ||||||||||||||||| ||
Sbjct 1733 -ACACCTTATGGGCCTGCGAGGTG-TACTATGAA-CAATGGAGGTTGCTGGTCTGACAC- 1788
Query 1444 AAA-AAGGGCTTAACTTTCTCCGCTTGCTC-GAACT-TGGAGAC-ATCGGGATGTCGC-T 1498
|| || |||||||||||||| |||||||| || || || | | | | || || | |
Sbjct 1789 AAGGAACGGCTTAACTTTCTCTGCTTGCTCAGA-CTCTGTAT-CTA-CTGGCTG-CAAAT 1844
Query 1499 GCCCTCCAGGGTTTA-AAGGAGATGGTCTTAAA-TGTGAAGACATTGATGAATGTAAGGA 1556
| ||| ||| ||| |||| || ||| || | |||||||| ||| | |||||||| ||
Sbjct 1845 GTCCTGAAGG-TTTCCAAGGCGACGGT-TTGACGTGTGAAGATATTAACGAATGTAAAGA 1902
Query 1557 ACAATCAGCT-TGTCAATGT-GATGGATGCA-ACTGTAAGAACA-ACTGGGGAGGCTTTG 1612
| || | | ||||||||| | || |||| | || |||||| | ||||| || |
Sbjct 1903 GCGTTCGG-TATGTCAATGTAGC-GGTTGCAGA-TGCAAGAACTCA-TGGGGTGGATACA 1958
Query 1613 AATGCAAATGCTCTGGAAATCGTCTCTACATGAAA-GAACAAGACACTTGTATTGAGAGA 1671
|||||| || ||||| | || || ||||| ||| || ||||| |||||||| ||||||
Sbjct 1959 AATGCAGCTGTTCTGGTGACCGGCTTTACAT-AAACGATCAAGATACTTGTATAGAGAGA 2017
Query 1672 -AGCGGATC-AAGAATCGG-ATGGTT-CTTTACGTT-TGTGATTCTAGCTG-CAGTTGCA 1725
| ||||| || || ||| ||||| || || || | |||| || ||| | ||||||
Sbjct 2018 TAT-GGATCCAA-AA-CGGCATGGTGGCTC-ACATTCT-TGATACTGGCTATC-GTTGCA 2071
Query 1726 --AGCATATGTGTAGGTGGTTACGTATTCTACAAGTATCG-TCTCAGGTCTTATATGGAT 1782
||| | | ||| |||||| |||||||||| || || | |||||||||| |||||
Sbjct 2072 GTAGCCGGT-T-TAGCTGGTTATATATTCTACAAATACCGGT-TCAGGTCTTACATGGAC 2128
Query 1783 TCAGAAATCATGGCGATTATGTCTCAGTACATGCCA-TTGGAGAGCCAAA 1831
||||| || ||| |||| ||||| ||||| |||||| ||| |||||||||
Sbjct 2129 TCAGAGATTATGACGATCATGTCACAGTATATGCCACTTG-AGAGCCAAA 2177
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93875019150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5