BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313750
Length=2037
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31690.1 | Symbols: | Copper amine oxidase family protein |... 3177 0.0
AT1G31710.1 | Symbols: | Copper amine oxidase family protein |... 1714 0.0
AT1G31670.1 | Symbols: | Copper amine oxidase family protein |... 1352 0.0
> AT1G31690.1 | Symbols: | Copper amine oxidase family protein
| chr1:11343980-11347767 FORWARD LENGTH=2034
Length=2034
Score = 3177 bits (1720), Expect = 0.0
Identities = 1930/2032 (95%), Gaps = 12/2032 (1%)
Strand=Plus/Plus
Query 1 ATGGCTCAAGTTCACTTCACCATCTTTATCTTTTCTTCCATTTTCGTAATCTCCTCATCG 60
||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 1 ATGGCTCAAGTTCACTTAACCATTTTTATATTTTCTTCCATTTTCGTAATCTCATCATCT 60
Query 61 AGCTTCATCCCGGCGCCTCACCCCTTCGATCCCTTGACCGAGACTGAACTCAAACTCGTC 120
||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 61 AGCTTCATCCCACCTCCTCACCCCTTCGATCCCTTGACCGAGACTGAACTCAAACTTGTC 120
Query 121 CG-AACCATCATCAATAAGTCGTACCCTATTGGTCATAACCATAAGTTCACTTTCCAATA 179
|| || ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 CGTAA-CATCATCAACAAGTCGTACCCTATTGGTCATAACCATAAGTTCACGTTCCAATA 179
Query 180 CGTGGGTCTCAACGAG-CTCGACAAGTCCCTAGTCTTATCGTGGCACTCCTCACCAGGCC 238
||||||||||||||| || || |||||||||||||| ||||||||||| ||||||| ||
Sbjct 180 TGTGGGTCTCAACGAGCCT-GAAAAGTCCCTAGTCTTGTCGTGGCACTCATCACCAGACC 238
Query 239 ACAACGTCAAACCACCACCACGTCAAGCTTTTGTCATTGCCCGAGATAAGGGCAAGAGCC 298
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 239 GCAACGTCAAACCACCACCACGTCAAGCTTTTGTCATCGCCCGAGATAAGGGCATGAGCC 298
Query 299 GAGAGATCGTTGTTGACTTTTCCACTCGAGCCATTATCTCCAACAAGATCCACGTAGGCA 358
||||||||||| ||||||||||||||||||| ||| |||| ||||||||||| |||||||
Sbjct 299 GAGAGATCGTTATTGACTTTTCCACTCGAGCAATTGTCTCGAACAAGATCCATGTAGGCA 358
Query 359 ATGGTAACCCTAA-GCTCACTATTGACGAGCAGCAAGCAGCCACCGCGCTTGTTCTTAAG 417
|||||||||| || ||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct 359 ATGGTAACCC-AATGCTAACTATTGACGAGCAGCAAGCAGCCACCGCGGTTGTTCAAAAG 417
Query 418 TTCAAGCCGTTCTGTGACTCGATAGTGAAACGCGGCTTGAACTTGTCGGAAGTTGTGGTC 477
| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 418 TACAAGCCGTTCTGTGACTCGATAATAAAACGCGGCTTGAACTTGTCGGAAGTTGTGGTC 477
Query 478 ACGTCCTCCACGATGGGATGGTTCGGTGAGA-AGAAGACAAAGAGGTTGATAAGAACGAT 536
|| ||||| |||||||||||||| ||||||| | ||||| |||||||| |||||||||||
Sbjct 478 ACCTCCTCAACGATGGGATGGTTTGGTGAGACA-AAGACGAAGAGGTTTATAAGAACGAT 536
Query 537 ACCCTTTTATCTAAACGGATCGGTGAACACGTATCTTAGACCAATTGAAGGCATGACGAT 596
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 537 ACCCTTTTATCTAAACGGATCGGTGAACACGTATCTTAGACCAATTGAAGGAATGACGAT 596
Query 597 AATCGTTAACCTTGACCAGATGAAAGTAGCGGAGTTCAAGGACAGATTCACGGGTCCTAT 656
|||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||
Sbjct 597 AATCGTTAACCTTGACCAGATGAAAGTAACGGGGTTCAAGGACAGGTTCACGGGTCCTAT 656
Query 657 GCCAAAGGCTGACGGGAGAGAGTACCGTATCTCAAAGCTCAAGCCGCCGTTTGGCCCGTC 716
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GCCGAAGGCTAACGGGAGAGAGTACCGTATCTCAAAGCTCAAGCCGCCGTTTGGCCCGTC 716
Query 717 ACTTCGAAGTGCCGTC-TTTTACCAGCCGGACGGTCCAGGATTTAAGATCGATGGACACG 775
||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||
Sbjct 717 GCTTCGAAGTGCCGTCGTTTT-CCAGCCGGACGGTCCAGGGTTTAAGATCGATGGACACG 775
Query 776 TCGTGAGATGGGCAAATTGGGAATTTCACATGTCATTTGACGTTCGAGCCGGTCTTGTCA 835
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 776 TCGTGAGATGGGCAAATTGGGAGTTTCACATGTCATTTGACGTTCGAGCCGGTCTTGTCA 835
Query 836 TCTCTCTCGCGTCCATTTTCGACATGGACATGAACAAATACCGGCAAGTCCTATACAAAG 895
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 836 TCTCTCTCGCGTCCATTTTCGACATGGACATGAACAGATACCGGCAAGTCCTATACAAAG 895
Query 896 GCCATTTGTCGGAGATGTTCGTACCTTACATGGACCCAAATGATGACTGGTACTTCATCA 955
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 896 GTCATTTGTCGGAGATGTTCGTACCTTACATGGACCCAAATGACGACTGGTACTTCATTA 955
Query 956 GTTACCTAGACTGTGGTGAATTTGGCTGCGGGCAATCTGCCGTGTCCCTTGAGCCGTATA 1015
||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct 956 GTTACCTAGACTGTGGTGAATTTGGCTGCGGCCAAACTGCCGTATCCCTTGAGCCGTATA 1015
Query 1016 CCGATTGTCCCCCAAATGCCGCCTTCATAGATGGCGTCTTTGCGGGACAAGATGGAACTC 1075
| ||||||||||| |||||||| ||||| |||||| |||| ||||||||||||||||||
Sbjct 1016 CTGATTGTCCCCCGAATGCCGCTTTCATGGATGGCATCTTCCCGGGACAAGATGGAACTC 1075
Query 1076 CTACAAAAGTATCGAATGTTATGTGCATTTTCGAAAAATATGCTGGAGACATTATGTGGC 1135
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 CTACAAAAATATCGAATGTTATGTGCATTTTCGAAAAATATGCTGGAGACATTATGTGGC 1135
Query 1136 GACATACCGAAGCTGAAGTACCCGGCTTAAAAATCACAGAGGTTAGACCAGATGTAAGTC 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GACATACCGAAGCTGAAGTACCCGGCTTAAAAATCACAGAGGTTAGACCAGATGTAAGTC 1195
Query 1196 TTGTAGCCCGGATGGTGACGACAGTGGGGAACTACGATTACATCATTGAGTATGAGTTCA 1255
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1196 TTGTAGCCCGGATGGTGACGACAGTGGGGAACTACGACTACATCATCGAGTATGAGTTCA 1255
Query 1256 AACCTAGCGGTTCCATCAAAATGGGGGTCGGTTTAACCGGTGTTTTAGAAGTTAAACCCG 1315
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1256 AACCAAGTGGTTCCATCAAAATGGGGGTCGGTTTAACCGGTGTTTTAGAAGTTAAACCTG 1315
Query 1316 TGGAATATGTTCACACATCAGAGATCAACGAAGACGACATCTACGGGACAATTGTTGCTG 1375
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1316 TGGAATATGTTCACACATCAGAGATCAAAGAAGACGACATCTACGGGACAATTGTTGCTG 1375
Query 1376 ACAACACCGTCGGAGTCAACCACGATCATTTCGTGACATTCCGTCTTGATCTTGATATCG 1435
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1376 ACAACACCGTCGGAGTTAACCACGATCACTTCGTGACATTCCGTCTTGATCTTGATATAG 1435
Query 1436 ATGGTACCGATAATTCCTTTGTTCGTAACGAACTTGTGACTAAGAGGACTCCAAAATCTG 1495
||||||| || ||||| |||||||||| |||||| ||||| |||||||||||||||||||
Sbjct 1436 ATGGTACGGAAAATTCATTTGTTCGTACCGAACTCGTGACCAAGAGGACTCCAAAATCTG 1495
Query 1496 TTAACACACCGAGAAAAAGCTATTGGACAACAAAACGAAACACAGCAAAAACCGAGGCAG 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 TTAACACACCGAGAAAAAGCTATTGGACAACAAAACGAAACACAGCAAAAACCGAGGCAG 1555
Query 1556 AGGCTCGGGTGAAACTAGGGCT-GAGAGCCGAGGAGTTGGTGGTGGTTAACCCTAATaaa 1614
| ||||||||||||||||| || |||||| |||||||||||||| |||||||||| |||
Sbjct 1556 ACGCTCGGGTGAAACTAGG-CTTGAGAGCGGAGGAGTTGGTGGTCGTTAACCCTACCAAA 1614
Query 1615 aaaaCGAAGCATGGCAATGAGGTTGGATACCGTCTACTTCCTGGCCCGGCTTCAAGCTCA 1674
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1615 AAAACTAAGCATGGCAATGAGGTTGGATACCGTCTACTTCCTGGGCCGGCTTCAAGCCCA 1674
Query 1675 CTTCTTGCCCAAGATGACTACCCACAGATTCGGGCAGCATTCACCAACTACAACGTGTGG 1734
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 CTTCTTGTCCAAGATGACTACCCACAGATTCGGGCAGCATTCACCAACTACAACGTGTGG 1734
Query 1735 ATCACGCCGTATAACAAATCGGAGGTTTGGACTAGCGGTTTGTACGCTGATCGGAGCCAA 1794
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1735 ATCACACCGTATAACAAATCGGAGGTTTGGGCTAGCGGTTTGTACGCTGATCGGAGCCAA 1794
Query 1795 GGTGACGACACATTAGCCGTATGGTCCCAAAGAGATAGGGAAATAGAGAAGAAAGATATA 1854
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1795 GGTGACGACACATTAGCCGTATGGTCCCAAAGAGATAGGGAAATAGAGAACAAAGATATA 1854
Query 1855 GTGATGTGGTACACCGTTGGATTCCACCATGTCCCATGCCAAGAAGATTTTCCGACGATG 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 GTGATGTGGTACACCGTTGGATTCCACCATGTCCCATGCCAAGAAGATTTTCCGACGATG 1914
Query 1915 CCTACTATGTTTGGCGGCTTTGAACTTCGGCCAACCAACTTTTTCGAGCAAAATCCTGTC 1974
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 CCTACTATGTTTGGCGGCTTTGAACTTCGGCCAACCAACTTTTTCGAGCAAAATCCTGTT 1974
Query 1975 CTCAAGGCTAAACCTATCAATCTCACCACCATTCCAAAATGTACTACGAAGA 2026
||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1975 CTCAAGGCTAAACCTTTCAATCTCACCACCATTCCAAAGTGTACTACGAAGA 2026
> AT1G31710.1 | Symbols: | Copper amine oxidase family protein
| chr1:11349840-11355486 FORWARD LENGTH=2208
Length=2208
Score = 1714 bits (928), Expect = 0.0
Identities = 1704/2075 (82%), Gaps = 67/2075 (3%)
Strand=Plus/Plus
Query 1 ATGGCTCAAGTTCACTTCACCA-TCTTTAT-C-TTT-TCTTCCATTTTCGTAATCTCCTC 56
||||||| | |||||||||||| || | || | ||| |||| | || ||||| |||| ||
Sbjct 16 ATGGCTCCACTTCACTTCACCATTC-TCATCCTTTTCTCTTTCGTTATCGTAGTCTCATC 74
Query 57 ATCGAGCTTCATC-CCGGCGCCTCACCCCTTCGATCCCTTGACCGAGACTGAACTCAAAC 115
|| ||||| | | || ||| |||||| || |||||||| |||||||| ||||||||||
Sbjct 75 CTCAAGCTTTA-CTCCACCGCGTCACCCATTTGATCCCTTAACCGAGACCGAACTCAAAC 133
Query 116 TCGTCCGAACCATCATCAATAAGTCGTACCCTATTGGTCATAACCATAAGTTCACTTTCC 175
||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||
Sbjct 134 TCGTCCGAACCATCATCAACAAGTCGTACCCCGTTGGTCCGAATCATAAGTTCACTTTCC 193
Query 176 AATACGTGGGTCTCAACGAGCTCGACAAGTCCCTAGTCTTATCGTGGCACTCCTCACCAG 235
||||||| ||||||||||| | | ||||||| |||||||| || ||| |||| ||||| |
Sbjct 194 AATACGTTGGTCTCAACGAACCCAACAAGTCTCTAGTCTTGTCTTGGTACTCATCACC-G 252
Query 236 -GCCACAACGTCAAACCACCACCACGTCAAGCTTTTGTCATTGCCCGAGATAAGGGCAAG 294
|| | | |||||||||||||||| ||||| || |||||||| ||||| || || |||
Sbjct 253 AATCATACCATCAAACCACCACCACGCCAAGCGTTCGTCATTGCTCGAGACAACGGAAAG 312
Query 295 AGCC-GAGAGATCGTTGTTGACTTTTCCACTCGAGCCATTATCTCCAACAAGATCCACGT 353
| || ||||||| || ||||||||||| |||| ||||| |||| |||| || |||||
Sbjct 313 A-CCAGAGAGATAGTCCTTGACTTTTCCTCTCGTGCCATCGTCTCGGACAAAATTCACGT 371
Query 354 AGGCAATGGTAACCCTAAGCTCACTATTGACGAGC-AGCAAGCAGCCACCGCGCTTGTTC 412
||| |||||| |||||| |||| | | ||||||| || ||||| |||||| |||||||
Sbjct 372 AGGAAATGGTTACCCTATGCTCTCAAACGACGAGCAAG-AAGCATCCACCGAGCTTGTTG 430
Query 413 TTAAGTTCAAGCCG-TTCTGTGACTCGATAGTGAAACGCGGCTTGAAC-TTGTCGGAAG- 469
| |||||||||||| || | ||||||| | | |||||| ||||| ||| || |||| ||
Sbjct 431 TCAAGTTCAAGCCGTTTAT-TGACTCGGTCGCGAAACGTGGCTTAAACGTT-TCGG-AGA 487
Query 470 TTGTGGTCACGTCCTCCACGATGGGATGGTTCGGTGAG---AA-G--AAGACAAAGAG-G 522
| ||| ||||| | || ||||| ||||||| ||||||| || | || | || | |
Sbjct 488 TCGTGTTCACGACGTCAACGATTGGATGGTACGGTGAGACTAAGGCCGAGGCGGAGCGAG 547
Query 523 TTGATAAGAACGATACCCTTTTATCTAAACGG-ATCGGTGAACACGTATCTTAGACCAAT 581
|| || ||| ||| || |||||||| |||| | | || || | |||||||||||| ||
Sbjct 548 TT-ATTAGATTGATGCCGTTTTATCTTGACGGCA-CCGTTAATATGTATCTTAGACCTAT 605
Query 582 TGAAGGCATGACGATAATCGTTAACCTTGACCAGATGAAAGTAGCGGAGTTCAAGGACAG 641
|||||| ||||||||||||||||| ||||| ||||||| ||| ||||||| ||||||||
Sbjct 606 TGAAGGAATGACGATAATCGTTAATCTTGATGAGATGAAGGTATCGGAGTTTAAGGACAG 665
Query 642 ATTCACG-GG-TCCTATG-CCAAAGGCTGACGGGA-GAGAGTACCGTATCTCAAAGCTCA 697
||| | || | ||||| ||| | ||| |||| | | |||||||||||||| ||||| |
Sbjct 666 -GTCA-GTGGTTACTATGCCCATA-GCTAACGGAACG-GAGTACCGTATCTCGAAGCTTA 721
Query 698 AGCCGCCGTTTGGCCCGTCACTTCGA-AGTGCCGT-CTTTTACCAGCCGGACGGTCCAGG 755
| || || ||||| ||| | |||| | | ||||| ||||| |||||||| ||||| ||
Sbjct 722 ACCCACCCTTTGGACCGACGCTTC-ATAACGCCGTCCTTTT-GCAGCCGGATGGTCCGGG 779
Query 756 ATTTAAGATCGATGGACACGTCGTGAGATGGGCAAATTGGGAATTTCACATGTCATTTGA 815
|| ||| ||||||||||| ||||||| ||||||||||||||||||||||| || || ||
Sbjct 780 CTTCAAGGTCGATGGACACATCGTGAGGTGGGCAAATTGGGAATTTCACATATCGTTCGA 839
Query 816 CGTTCGAGCCGGTC-TTGTCATCTCTCTCGCGTCCATTTTCGACATGGACATGAACAAAT 874
|||||||| || | | ||||| |||||||| ||| ||||||||| |||| |||||||||
Sbjct 840 TGTTCGAGCTGG-CATCGTCATATCTCTCGCATCCCTTTTCGACACGGACGTGAACAAAT 898
Query 875 ACCGGCAAGTCCTATACAAAGGCCATTTGTCGGAGATGTTCGTACCTTACATGGACCCAA 934
|||||||||||||||| ||||| || || ||||| |||||| ||||||||||||||||||
Sbjct 899 ACCGGCAAGTCCTATATAAAGGTCACTTATCGGAAATGTTCATACCTTACATGGACCCAA 958
Query 935 ATGATGACTGGTACTTCATCAGTTACCTAGACTGTGGTGAATTTGGCTGCGGGCAAT-CT 993
|||||| ||||| ||||| | ||| || || ||||| || ||||||||||| |||| |
Sbjct 959 GTGATGATTGGTATTTCATTACTTATCTTGATTGTGGCGATTTTGGCTGCGGTCAATGC- 1017
Query 994 GCCGTGTCCCTTGAGCCGTATACCGATTGTCCCCCAAATGCCGCCTTCATAGATGGCGTC 1053
||||| || ||| | ||||| || |||||||| | ||| | || || ||||| |
Sbjct 1018 GCCGTATCTCTTCAACCGTACACTGATTGTCCAGCGGGTGCAGTTTTTATGGATGGTATT 1077
Query 1054 TTTGCGGGACAAGATGGAACTCCTACAAAAGTATCGAATGTTATGTGCATTTTCGAAAAA 1113
||||| || |||||||||||||| ||||| | | || |||||||||||||| ||||||
Sbjct 1078 TTTGCTGGTCAAGATGGAACTCCCGCAAAAATCCCAAAAGTTATGTGCATTTTTGAAAAA 1137
Query 1114 TATGCTGGAGACATTATGTGGCGACATACCGAAGCTGAAGTACCCGGCTTAAAAATCACA 1173
||||||||||| || |||||||||||||| ||||||||| | || |||| |||| ||
Sbjct 1138 TATGCTGGAGATATCATGTGGCGACATACAGAAGCTGAAATTCCAAACTTAGAAATTACG 1197
Query 1174 GAGGTTAGACCAGATGTAAGTCTTGTAGCCCGGATGGTGACGACAGTGGGGAACTACGAT 1233
||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||| ||
Sbjct 1198 GAGGTTAGACCGGACGTAAGTCTTGTAGCCCGGATTGTGACGACCGTGGGAAACTATGAC 1257
Query 1234 TACATCA-TTGAGTATGAGTTCAAACCTAGCGGTTCCATCAAAATGGGGGTCGGTTTAAC 1292
||||| | |||| ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 1258 TACAT-AGTTGATTATGAGTTCAAGCCTAGTGGTTCCATCAAAATGGGGGTCGGCTTAAC 1316
Query 1293 CGGTGTTTTAGAAGTTAAACCCGTGGAATATGTTCACACATCAGAGATC-AAC--GAAGA 1349
||||||||||||||| ||||| || |||||| |||||||||| || ||| ||| | ||
Sbjct 1317 CGGTGTTTTAGAAGTGAAACCGGTAGAATATATTCACACATCCGAAATCAAACTAGGGGA 1376
Query 1350 CGACAT-CTACGGGACAATTGTTGCTGACAACACCGTCGGAGTCAACCACGATCATTTCG 1408
||||| | ||||||||||||| || |||||||||||||| || |||||||| |||||||
Sbjct 1377 AGACATAC-ACGGGACAATTGTCGCCGACAACACCGTCGGTGTTAACCACGACCATTTCG 1435
Query 1409 TGACATTCCGTCTTGATCTTGATATCGATGGTACCGATAATTCCTTTGTTCGTAACGAAC 1468
|||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||
Sbjct 1436 TGACATTCCGTCTTCATCTTGACATCGACGGTACCGAAAATTCCTTTGTTCGTAACGAAC 1495
Query 1469 TTGTGACTAAGAGGACTCCAAAATCTGTTAACACACCGAGAAAAAGCTATTGGACAACAA 1528
||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1496 TTGTGACCACGAGGTCTCCAAAATCTGTTAACACACCGAGAAAAACCTATTGGACAACGA 1555
Query 1529 AACGAAACACAGCAAAAACCGAGGCAGAGGCTCGGGTGAAACTAGGGCTG-AGAGCCGAG 1587
| | ||| || || || ||||||||||||||||||||||||||||| || || || |||
Sbjct 1556 AGCCAAAGACGGCCAAGACCGAGGCAGAGGCTCGGGTGAAACTAGGTTTGAAG-GCGGAG 1614
Query 1588 GAGTTGGTGGTGGTTAACCCTAATaaaaaaaCGAAGCATGGCAATGAGGTTGGATACCGT 1647
||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1615 GAGTTAGTTGTGGTTAACCCTAACCGAAAGACGAAGCATGGCAATGAGGTTGGATACCGT 1674
Query 1648 CTACTTCCTGGC-CCGGCTTCAAGCTCACTTCTTGCCCAAGATGACTACCCACAGATTCG 1706
|||||| ||| ||| || || || |||| || ||||||||||| | ||| ||||||||
Sbjct 1675 TTACTTCATGGATCCG-CTGCAGGCCCACTCCTGGCCCAAGATGATTTCCCGCAGATTCG 1733
Query 1707 GGCAGCATTCACCAACTACAACGTGTGGATCACGCCGTATAACAAATCGGAGGTTTGGAC 1766
|| |||||||||||||| ||||||||||||||||||||||||| || ||||||||| |
Sbjct 1734 AGCTGCATTCACCAACTATAACGTGTGGATCACGCCGTATAACAGGTCAGAGGTTTGGGC 1793
Query 1767 TAGC-GGTTTGTACGCTGATC-GGAGCCAAGGTGACGACACATTAGCCGTATGGTCCCAA 1824
|| |||||||||||||| | |||||||||| ||||| || || || || ||||| |||
Sbjct 1794 -AGGTGGTTTGTACGCTGA-CAGGAGCCAAGGCGACGATACGTTGGCAGTGTGGTCTCAA 1851
Query 1825 AGAGA-TAGGGAAATAGAGAAGAAAGATATAGTGATGTGGTACACCGTTGGATTCCACCA 1883
|| || ||| ||||||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct 1852 AG-GAATAGAAAAATAGAGAAGGAAGATATAGTGATGTGGTACACCGTCGGTTTCCACCA 1910
Query 1884 TGTCCC-ATGCCAAGAAGATTTTCCGACGATGCCTACTATGTTTGGCGGCTTTGAACTTC 1942
||| || | |||| ||||||| ||||||||||||||| | | || |||||||| || |
Sbjct 1911 TGTTCCTA-GCCAGGAAGATTACCCGACGATGCCTACTTTATCCGGTGGCTTTGAGCTCC 1969
Query 1943 GGCCAACCAACTTTTTCGAGCAAAATCCTGTCCTCAAGGCTAAACCTATCAATCTCACCA 2002
| || |||||||||||||||| ||| |||||||||||| | ||||| |||| | ||||
Sbjct 1970 GACCGACCAACTTTTTCGAGCGAAACCCTGTCCTCAAGACCAAACCCGTCAAAGTTACCA 2029
Query 2003 CCATTCCAAAATGTACTACGAAGAGGAACGATTAA 2037
|| || ||| || ||| | || | |||||||||
Sbjct 2030 CCGCTCGAAAGTGCACTCCTAA-A--AACGATTAA 2061
> AT1G31670.1 | Symbols: | Copper amine oxidase family protein
| chr1:11337558-11341889 FORWARD LENGTH=2226
Length=2226
Score = 1352 bits (732), Expect = 0.0
Identities = 1263/1518 (83%), Gaps = 41/1518 (3%)
Strand=Plus/Plus
Query 31 TTTTCTTCCATTTTCGTAATCTCCTCATCGAGCTTCATCCCGGCGCCTCACCCCTTCGAT 90
||||||||| |||| |||||| || | ||||||||||| |||||||||| || |||
Sbjct 271 TTTTCTTCCGTTTTTGTAATCGGATCCTTAAGCTTCATCCCACCGCCTCACCCATTTGAT 330
Query 91 CCCTTGACCGAGACT-GAACTCAAACTCGTCCG-AACCATCATCAA--TAAGTCGTACCC 146
|||||||| |||| | |||||||| |||||||| || ||||||||| ||| ||||||
Sbjct 331 CCCTTGACTGAGA-TCGAACTCAATCTCGTCCGTAA-CATCATCAACGAAAG--GTACCC 386
Query 147 TATTGGTCAT--AACCATAAGTTCACTTTCCAATACGTGGGTCTCAACGAGCTCGACAAG 204
||||||| | || |||| |||||||||||| ||||||||||||||||| | |||||||
Sbjct 387 CATTGGTC-TGGAA-CATAGGTTCACTTTCCAGTACGTGGGTCTCAACGAACCCGACAAG 444
Query 205 TCCCTAGTCTTATCGTGGCACTCCTCACCAGGCCACAACGTCAAACCACCACCACGTCAA 264
|||||||||||||| ||| || |||| | |||||| ||||| |||||||||||||
Sbjct 445 TCCCTAGTCTTATCCTGGGTTTCATCACAATACCACAATGTCAAGTCACCACCACGTCAG 504
Query 265 GCTTTTGTCATTGCCCGAGATAAGGGCAAGAGCCGAGAGATCGTTGTTGACTTTTCCACT 324
|| || ||||| || |||||| | || |||| |||||||||||| || |||||| || ||
Sbjct 505 GCATTCGTCATCGCTCGAGATCACGGAAAGACCCGAGAGATCGTCGTGGACTTTGCCTCT 564
Query 325 CGAGCCATTATCTC-CAACAAGATCCACGTAGGCAATGGTAACCCTAAGCTCACTATTGA 383
| ||||||| | || || ||||| |||||||| |||||| |||||| ||| || |||||
Sbjct 565 CAAGCCATTGTTTCGGAA-AAGATTCACGTAGGAAATGGTTACCCTATGCTTACAATTGA 623
Query 384 CGAGCAGCAAGCAGCCACCGCGCTTGTTCTTAAGTTCAAGCCGTTCTGTGACTCGAT-AG 442
|||||| |||||| ||| || ||||||||| ||||||||||||||| ||||||| || ||
Sbjct 624 CGAGCAACAAGCAACCAGCGAGCTTGTTCTCAAGTTCAAGCCGTTCCGTGACTCAATCAG 683
Query 443 TGAAACGCGGCTTGAACTTGTCGGAAGTTGTGGTCACGTCCTCCACGATGGGATGGTTCG 502
|| ||| ||||||||| |||| || ||||| |||||| |||| |||||||||||||| |
Sbjct 684 -GAGACGTGGCTTGAACGTGTCCGAGGTTGTTGTCACGACCTCAACGATGGGATGGTTTG 742
Query 503 GTGAGAAGAAGACAAAGAGG-TTGATAAGAACGATACCCTTTTATCTAAACGGATCGGTG 561
||||| |||| | ||||| || |||| || || ||| |||||||| || || ||||||
Sbjct 743 GTGAGGCGAAGCCGGAGAGGCTT-ATAAAAAAGAGACCGTTTTATCTGAATGGGTCGGTG 801
Query 562 AACACGTATCTTAGACCAATTGAAGGCATGACGATAATCGTTAACCTTGACCAGATGAAA 621
||||| || |||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct 802 AACACTTACCTTAGACCTATAGAAGGAATGACGATAATCGTTAACCTTGACCAGATGAAA 861
Query 622 GTAGCGGAGTTCAAG-GACAGATTCACGGGTCCTATGCCAAAGGCTGACGGG-AGAGAGT 679
||| || |||| || || || || ||| ||||| |||| || ||| | ||| | ||||
Sbjct 862 GTAACGAAGTT-TAGAGATAGGTTTACGAGTCCTTTGCCTAATGCT-AAGGGAACCGAGT 919
Query 680 ACCGTATCTCAAAGCTCAAGCCGCCGTTTGGCCCGTCACTTCGAAGTGCCGT-CTTTTAC 738
||||||||| ||||| || ||||||||||||||||| |||| || ||||| |||||
Sbjct 920 TCCGTATCTCGAAGCTAAAACCGCCGTTTGGCCCGTCGCTTCAAAACGCCGTCCTTTT-T 978
Query 739 CAGCCGGACGGTCCAGGATTTAAGATCGATGGACACGTCG--TGAGATGGGCAAATTGGG 796
||| |||| || || || ||||| |||||||||||| || | ||||||||||||||||
Sbjct 979 CAGTCGGAGGGGCCTGGGTTTAAAATCGATGGACAC-ACGAAT-AGATGGGCAAATTGGG 1036
Query 797 AATTTCACATGTCATTTGACGTTCGAGCCGGTCTTGTCATCTCTCTCGCGTCCATTTTCG 856
|||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||
Sbjct 1037 AATTCCACATGTCATTTGACGTACGAGCTGGTCTTGTTATCTCTCTTGCGTCCATTTTCG 1096
Query 857 ACATGGACATGAACAAATACCGGCAAGTCCTATACAAAGGCCATTTGTCGGAGATGTTCG 916
|||||||| | ||||||||||| ||||||||||||||||||||||||||||| || || |
Sbjct 1097 ACATGGACGTTAACAAATACCGTCAAGTCCTATACAAAGGCCATTTGTCGGAAATATTTG 1156
Query 917 TACCTTACATGGACCCAAATGATGACTGGTACTTCATCAGTTACCTAGACTGTGGTGAAT 976
||||||| ||||| |||| ||| || |||||||||| | || | |||||||||||||
Sbjct 1157 TACCTTATATGGATCCAAGTGAAGATTGGTACTTCAGAACTTTTTTTGACTGTGGTGAAT 1216
Query 977 TTGGCTGCGGGCAATCTGCCGTGTCCCTTGAGCCGTATACCGATTGTCCCCCAAATGCCG 1036
|||| ||||| |||| ||| ||||| ||||| || || |||||||||||| || || |
Sbjct 1217 TTGGTTGCGGCCAATATGCTGTGTCTCTTGAACCTTACACCGATTGTCCCGGTAACGCTG 1276
Query 1037 CCTTCATAGATGGCGTCTTTGCGGGACAAGATGGAACTCCTACAAAAGT-ATCGAATGTT 1095
||||||| || ||||||||||| | ||||| |||||||| | |||| | | | ||||||
Sbjct 1277 CCTTCATGGACGGCGTCTTTGCAAGCCAAGACGGAACTCCGATAAAAATCA-CAAATGTT 1335
Query 1096 ATGTGCATTTTCGAAAAATATGCTGGAGACATTATGTGGCGACATACCGAAGCTGAAGTA 1155
|||||||| ||||| |||||||| ||||||||||||||||| ||||||||| |||| |
Sbjct 1336 ATGTGCATCTTCGAGAAATATGCCGGAGACATTATGTGGCGGCATACCGAAATTGAAATT 1395
Query 1156 CCCGGCTTAAAAATCACAGAGGTTAGACCAGATGTAAGTCTTGTAGCCCGGATGGTGACG 1215
|||||||||||| | | ||| || || ||||||||||| | |||||||||||||
Sbjct 1396 CCCGGCTTAAAAGT-A-AGA-------CCGGACGTAAGTCTTGTGGTCCGGATGGTGACG 1446
Query 1216 ACAGTGGGGAACTACGATTACATCA-TTGAGTATGAGTTCAAACCTAGCGGTTCCATCAA 1274
|| |||||||||||||| || || | |||| || |||||||||||||| |||||||||||
Sbjct 1447 ACCGTGGGGAACTACGACTATAT-AGTTGATTACGAGTTCAAACCTAGTGGTTCCATCAA 1505
Query 1275 AATGGGGGTCGGTTTAACCGGTGTTTTAGAAGTTAAACCCGTGGAATATGTTCACACATC 1334
||| |||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||
Sbjct 1506 AATTGGGGTCGGTTTAACAGGTGTTTTAGAAGTTAAACCGGTGAAATATGTTAACACATC 1565
Query 1335 AGAGATCAACGAAGACGACATCTACGGGACAATTGTTGCTGACAACACCGTCGGAGTCAA 1394
|||||||| |||||||| ||| | |||||||| || || ||||||||| | ||||| ||
Sbjct 1566 CGAGATCAAAGAAGACGATATCCATGGGACAATCGTCGCGGACAACACCATTGGAGTTAA 1625
Query 1395 CCACGATCATTTCGTGACATTCCGTCTTGATCTTGATATCGATGGTACCGATAATTCCTT 1454
|||||| ||||||||||||| ||||||||||||||| || ||||| || |||||||| ||
Sbjct 1626 CCACGACCATTTCGTGACATACCGTCTTGATCTTGACATTGATGGCACGGATAATTCTTT 1685
Query 1455 TGTTCGTAACGAACTTGTGACTAAGAGGACTCCAAAATCTGTTAACACACCGAGAAAAAG 1514
||| |||| ||||||||||| |||||||| ||||||||||||||||| || || || ||
Sbjct 1686 TGTCCGTAGTGAACTTGTGACCAAGAGGACACCAAAATCTGTTAACACGCCTAGGAAGAG 1745
Query 1515 CTATTGGACAACAAAACG 1532
|||||||||||| |||||
Sbjct 1746 CTATTGGACAACGAAACG 1763
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100953295995
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5