BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313859
Length=1944
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33060.2 | Symbols: ANAC014, NAC014 | NAC 014 | chr1:1197534... 2673 0.0
> AT1G33060.2 | Symbols: ANAC014, NAC014 | NAC 014 | chr1:11975342-11978521
REVERSE LENGTH=2163
Length=2163
Score = 2673 bits (1447), Expect = 0.0
Identities = 1811/1979 (92%), Gaps = 55/1979 (3%)
Strand=Plus/Plus
Query 1 ATGAACCAAACAAAAAACAAAACTTTACCGGAGATGACGACGGAGCAAGCTTTGTTGTCT 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 29 ATGAACCAAATAAAAAACAAAACTTTACCGGAGATGACGACGGAGCAAGCTTTGTTGTCT 88
Query 61 ATGGAAGCGTTACCTCTAGGTTTCAGGTTCAGACCAACGGATGAAGAACTCATCAATCAT 120
|||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 89 ATGGAAGCTTTACCTTTAGGTTTCAGATTCAGACCAACGGATGAAGAACTCATCAATCAT 148
Query 121 TATCTAAGGTTAAAAATCAACGGCCGTGATTTAGAAGTTAGAGTCATCCCTGAGATCGAT 180
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 149 TACCTAAGGTTAAAAATCAACGGCCGTGATTTAGAGGTTAGAGTCATCCCTGAGATCGAT 208
Query 181 GTTTGCAAGTGGGAACCATGGGACTTACCTGGGCTTTCGGTGATAAAGACGGATGATCAA 240
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 209 GTTTGCAAGTGGGAACCATGGGACTTACCTGGGCTATCGGTGATAAAGACAGATGATCAA 268
Query 241 GAATGGTTCtttttttGTCCTCGTGATCGGAAGTATCCGAGTGGTCATCGTTCTAATAGA 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 269 GAATGGTTCTTTTTTTGTCCTCGTGATCGAAAGTATCCGAGTGGTCATCGTTCTAATAGA 328
Query 301 GCTACTGATATTGGTTACTGGAAAGCTACTGGGAAAGATCGAACTATTAAGTCTAAGAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 GCTACTGATATTGGTTACTGGAAAGCTACTGGGAAAGATCGAACTATTAAGTCTAAGAAG 388
Query 361 TTGATTATTGGTATGAAGAAGACTCTTGTTTTCTATCGTGGAAGAGCTCCTAGAGGAGAG 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 ATGATTATTGGTATGAAGAAGACTCTTGTTTTCTATCGTGGAAGAGCTCCTAGAGGAGAG 448
Query 421 CGTACTAATTGGATTATGCATGAGTATCGTGCCACTGATAAGGAACTAGATGGTACTGGA 480
|||||||||||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct 449 CGTACTAATTGGATTATGCATGAGTATCGTGCTACAGACAAGGAACTAGATGGTACTGGA 508
Query 481 CCTGGTCAGAATCCGTATGTTTTGTGTCGCTTGTTCCACAAGCCTAGTGATAGTTGTGAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 CCTGGTCAGAATCCGTATGTTTTGTGTCGCTTGTTCCACAAGCCTAGTGATAGTTGTGAT 568
Query 541 CCTACAAACTGTGAGGAAATAGAGAATGTTAATTCCACTCCTACCACTAC---TAGATGC 597
||| || ||||||||||||||||||| ||||||| ||||| ||||| || |||||||
Sbjct 569 CCTGCACACTGTGAGGAAATAGAGAAAGTTAATTTTACTCCAACCACCACCACTAGATGC 628
Query 598 TCTCCTGATGACACATCTTCTGAAATGGTCCAAGAAACATCTACATCTGGTGTGCATGCT 657
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 629 TCTCCTGATGACACATCTTCTGAAATGGTCCAAGAAACAGCTACATCTGGTGTACATGCT 688
Query 658 CTAGATAGATCAGATGATACTGAGAGGTGTTTAAGCGACAAGGG---TAATGATGTGAAA 714
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 689 CTAGATAGATCAGATGACACTGAGAGGTGTTTAAGTGACAAGGGCAATAATGATGTGAAA 748
Query 715 CCTGATGTTTCAGTTATTAACAAAACTTCTGTCAATCATGCTGAAACTTCTCACGCCAAA 774
|||||||||||||| || ||||| |||||||||||||| ||||||||||||| ||||||
Sbjct 749 CCTGATGTTTCAGTGATAAACAATACTTCTGTCAATCACGCTGAAACTTCTCGTGCCAAA 808
Query 775 GACCGTGTTTTGGGAAAAA-GCTTAGTAGAGGAAAATC-ACCTTCTAAGGGACATTCCAA 832
|||||| |||||| || | | |||||||||||||||| || ||||||||||| ||||||
Sbjct 809 GACCGTAATTTGGGCAAGACG-TTAGTAGAGGAAAATCCAC-TTCTAAGGGACGTTCCAA 866
Query 833 CTCTTTATGGACCCATCTTAAGTGAGAAATCATATTATCCAGGGCAGTCAAGCATCGGTT 892
||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 867 CTCTTCATGGACCCATCTTGAGTGAGAAATCATATTATCCAGGACAGTCAAGCATCGGTT 926
Query 893 TTGCTACGTCACACATAGATTCGATGTATTCTAGCGATTTTGGAAACTGTGATTATGGGC 952
||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 927 TTGCTACATCTCACATGGATTCTATGTATTCTAGTGATTTTGGAAACTGTGATTATGGGC 986
Query 953 TACATTTTCAGGATGGTGCCTCTGAACAAGATGCATCTTTAACAGATGTCTTGGATGAGG 1012
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 987 TACATTTTCAAGATGGTGCCTCTGAACAAGATGCATCTTTAACAGATGTCTTGGATGAAG 1046
Query 1013 TATTCCATAACCATAATGAATCCTCTAGTGAAAGGAAAGACTTTGCGA-TTCCAAATATG 1071
||||||||||||||||||||||||||| ||| ||||||||||||| | |||| ||||||
Sbjct 1047 TATTCCATAACCATAATGAATCCTCTAATGACAGGAAAGACTTTGT-ACTTCCGAATATG 1105
Query 1072 ATGCATTGGCCTGGAAATACAAGACTGTTGTCTACTGAGTACCCATTTCTCAAAGATTCC 1131
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 ATGCATTGGCCTGGTAATACAAGACTGTTGTCTACTGAGTACCCATTTCTCAAAGATTCT 1165
Query 1132 GTTGCTTTT-TTAGACGGCAGTGCTGATGTTTTCAGCCCACAGCACTTTGTTCCTGACAT 1190
||||||||| || |||||||||||||| |||| | || ||||||| ||||||||||||||
Sbjct 1166 GTTGCTTTTGTT-GACGGCAGTGCTGAAGTTTCCGGCTCACAGCAATTTGTTCCTGACAT 1224
Query 1191 TTTAGCTTCCAGATGGGTCAGTGAACACAACCTTGATAGCAAGGAGGTAGTAGAGATTCA 1250
||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||
Sbjct 1225 TTTAGCTTCTAGATGGGTCAGTGAACAGAACGTTGATAGCAAGGAGGCAGTAGAGATTCT 1284
Query 1251 ATCTTCATCAGGGTCCTCTCGGACCGTGACGCCACTTCATAACAACGTGTTTGGGCAATA 1310
||||||| | ||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 1285 ATCTTCAACCGGGTCCTCTCGGACCTTGACGCCACTTCATAACAACGTTTTTGGGCAATA 1344
Query 1311 TGCTTCATCGTCTTATGCAACTATTGATCCATTCAACTATAATGTCAACCAGCCCGAACA 1370
||||||||||||||| ||| |||| |||||||| |||||||||||||| ||||| |||||
Sbjct 1345 TGCTTCATCGTCTTACGCAGCTATCGATCCATTTAACTATAATGTCAATCAGCCTGAACA 1404
Query 1371 ATCATCCTTTGAGC-------T-T---C---A---T----CCCGGTAACATATCTGGGTT 1409
||||||||||||| | | | | | ||| ||||||| | || |||
Sbjct 1405 GTCATCCTTTGAGCAAAGCCATGTTGACCGCAACATTAGTCCCAGTAACATTTTTGAGTT 1464
Query 1410 CAATGCTAGGTCTCGAGAGAATCAGACAAATCTTGACTCTGTTGTGGACCAAGGCACTGC 1469
||| |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 1465 CAAGGCTAGGTCTCGAGAGAATCAGAGAGATCTGGACTCTGTTGTGGACCAAGGCACTGC 1524
Query 1470 TCCTAGAAGAATTCGGCTGCAAATCGAACCGCCATTGACACCAGTTATCAACAAGAAAGA 1529
||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||
Sbjct 1525 TCCTAGAAGAATTCGGCTGCAGATCGAACAGCCATTGACGCCAGTTACCAACAAGAAAGA 1584
Query 1530 GAGAGATGCAGACAACTATGAAGAAGA---TGAAGTACAATCTGCCATGTCCAAGGTCGT 1586
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1585 GAGAGATGCGGACAACTATGAAGAAGAAGATGAAGTACAATCTGCCATGTCCAAGGTCGT 1644
Query 1587 AGAGGAAGAATCAGCCAATTTAAGTACTCAGGGGACTGCTCAGAGGAGAATCCGCCTGCA 1646
|||||||||| | || ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1645 AGAGGAAGAACCGGCTAATTTAAGTGCTCAGGGGACTGCTCAGAGGAGAATCCGCCTGCA 1704
Query 1647 GACGAGATTGAGGAAGCCTCTCATAACCATAAACAACAGAGAAAGAGACTCAAACGGCAG 1706
|||||||||||||||||||||||||||| ||||||| | | ||||| ||||||| |||||
Sbjct 1705 GACGAGATTGAGGAAGCCTCTCATAACCCTAAACAATACAAAAAGAAACTCAAATGGCAG 1764
Query 1707 AGA-GGAAGAAGCAGGCCATCATAGCAAGGAAAAGGGAGATGTGtcatcatcatcatcat 1765
||| ||| |||||| ||||| | | ||| | || ||| || | | | |
Sbjct 1765 AGAAGGA-GAAGCAAGCCAT-AG-G-AAGT----GTGAAATG---CAGGAAAAAGA--AG 1811
Query 1766 catcatcatcatcatcatcatcatGGCAGAAACAGAAGAAGAGCTTGGTGCAGTATAGTA 1825
|| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1812 -AT-AT-ATCATCATCATCATCATGGCAGAAACAGAAGAAGAGCTTGGTGCAGTTTAGTA 1868
Query 1826 GTATGGTGATATTAGTGGCGGTGATAGTTGTTTTAGTAGGAGTATGGAAAGAGTCAAGAG 1885
|| |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1869 GTGTGGTGATAATAGTGGCGGTGATAGTTGTTTTAGTAGAAATATGGAAAGAGTCAAGAG 1928
Query 1886 ATGCCAAATGTAGCTTCTTGTTTCATCAATTAGATTCCTTCAAAGGCATGTTTACTTGA 1944
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1929 ATGCGAAATGTAGCTTCTTGTTTCATCAATTAGATTCCTTCAAAGGCATGTTTACTTGA 1987
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96284645310
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5