BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg313917 Length=564 Score E Sequences producing significant alignments: (Bits) Value AT1G34010.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 767 0.0 > AT1G34010.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:12359536-12361189 REVERSE LENGTH=995 Length=995 Score = 767 bits (415), Expect = 0.0 Identities = 523/570 (92%), Gaps = 27/570 (5%) Strand=Plus/Plus Query 1 ATGTTATTTGCAGCAGAAGGAGGAGGATTCTTCTCTTCATCAGCTTCTGGTTATAGCAAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 ATGTTATTTGCAGCAGAAGGAGGAGGATTCTTCTCTTCATCAGCTTCTGGTTATAGCAAT 221 Query 61 GGTTTAGCTCTTCTTCTATTAGGTCAAAAGAATGAACAAAAACCTATCAAAGTATCATCA 120 ||||||||||||||||||||||||||||||| |||||||||||| |||||||| | ||| Sbjct 222 GGTTTAGCTCTTCTTCTATTAGGTCAAAAGACTGAACAAAAACCAATCAAAGT-T--TCA 278 Query 121 TCACAATGGAACCATTATCATTTAGTGGTTGAAGAATCTGATACTGGGTTTCGGTTAGAT 180 |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct 279 TCACAATGGAACCATTATCATTTAGTTCTTGAAGATTCTGATACCGGGTTTCGGTTAGAT 338 Query 181 TCGTCTAAGAATTGGCTCTCTTCTGCCTGCACTTCACTTATATGTTTTGGTCGAAAATCC 240 |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct 339 TCGTCTAAGAATTGGCTCTCTTCTGCTTGCACTTCTCTCATATGTTTTGGTCGAAAATCC 398 Query 241 GAAAGACTTGAAAGTCCATCTGATATTCGAGGGAAGAAGGATGAGGCAGTGGCACCGAGT 300 |||||||| ||||| | | | | |||||||| | || | | |||||||||| Sbjct 399 GAAAGACTGGAAAG-----C-G--A---G-GGGAAGAA--A-GATG-A--GGCACCGAGT 440 Query 301 GTGGA-G--TATAAT---TGTGAAGTTACTAATAGGTTTGCACTTAAAAGCAGCTTGAAG 354 ||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 441 GTGGAGGACTATAATAACTGTGAAGTCACTAATAGGTTTGCACTTAAAAGCAGCTTGAAG 500 Query 355 AAGCGGTCATTTAGCGATGTTGTGATTGGTGATGATGATGTGAGTAGAGATGGTGTGGTG 414 || | || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 501 AAAAGATCGTTTAGTGATGTTGTGATTGGTGATGATGATGTGAGTAGAGATGGTGTGGTG 560 Query 415 GATCATACAGATAGAAGGAAAGTGCAGTGGCCTGATACTTGTGGTATTGAGATTGCTGAG 474 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 561 GATCATATAGATAGAAGGAAAGTGCAGTGGCCTGATACATGTGGTATTGAGATTGCTGAG 620 Query 475 GTCAGAGAATTTGAGCCTAGTGAAGTTGATGAATCAGACGATGAGTTTCATCATGGAAGT 534 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 621 GTCAGAGAATTTGAGCCTAGTGAAGTTGATGAATCAGAAGATGAGTTTCATCATGGAAGT 680 Query 535 GGAAAAAGCTGTATGTGCACAATCATGTGA 564 |||||||||||||||||||||||||||||| Sbjct 681 GGAAAAAGCTGTATGTGCACAATCATGTGA 710 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27076205233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5