BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313950
Length=1497
Score E
Sequences producing significant alignments: (Bits) Value
AT1G34540.1 | Symbols: CYP94D1 | cytochrome P450, family 94, su... 2322 0.0
AT3G56630.1 | Symbols: CYP94D2 | cytochrome P450, family 94, su... 2069 0.0
AT5G33441.1 | Symbols: | pseudogene, similar to cytochrome P45... 701 0.0
> AT1G34540.1 | Symbols: CYP94D1 | cytochrome P450, family 94,
subfamily D, polypeptide 1 | chr1:12637054-12638550 FORWARD
LENGTH=1497
Length=1497
Score = 2322 bits (1257), Expect = 0.0
Identities = 1422/1502 (95%), Gaps = 10/1502 (1%)
Strand=Plus/Plus
Query 1 ATGGCGCTCTTAATCTTCATCTTCCTCCTCTGTTTCCCTATCTTCATCTTCTATATCTTC 60
|||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1 ATGGCGCTCTTAATATTCATCTTCCTCCTCTGTTTCCCTATCTCCATCTTCTTTATCTTC 60
Query 61 TTC-CCGAAGAATTCTTCTTCAGAATTTGGTTTCAAGTCGTATCCGATCGTCGGGAGCTT 119
||| || ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 61 TTCACC-AAGAAATCTTCTTCAGAATTTGGTTTCAAGTCGTATCCAATCGTCGGAAGCTT 119
Query 120 TCCTGGTCTAGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTGTCTCG 179
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 120 TCCTGGTCTTGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTTTCTCG 179
Query 180 ATGTCCAACTCAAACAGCGATTTTCCGGCTACCAGGGAAGAAACAACTCATCATGACGGC 239
||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 180 ATGTCCAACCCAAACGGCGATTTTCCGGCGACCAGGGAAGCAACAACTCATCATGACGGC 239
Query 240 GAATCCATCCAACGTCGAGTATATGCTCAAGACGAAGTTCGAGAGTTTCCCTAAAGGCGA 299
||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||| |
Sbjct 240 GAATCCATCTAACGTCGAGTATATGCTCAAGACCAAATTCGAGAGCTTCCCTAAAGGCCA 299
Query 300 ACAGTTTACCTCGGTTCTTGAGGATTTTCTCGGCCACGGGATTTTTAATTCCGACGGTGA 359
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 300 ACAGTTTACTTCGGTTCTTGAGGATTTTCTCGGCCACGGGATTTTTAATTCCGATGGTGA 359
Query 360 GATGTGGTGGAAACAGAGGAAGACGGCAAGCTACGAATTTAGTACTAAATCTCTCCGTGA 419
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 360 TATGTGGTGGAAACAGAGGAAGACGGCGAGCTACGAATTTAGTACTAAATCTCTCCGTGA 419
Query 420 CTTTGTTATGAGCAACGTCACCGTCGAAATCAACACTAGGCTCGTTCCGGTGTTAGTAGA 479
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 420 CTTTGTTATGAGCAACGTCACCGTCGAAATCAACACCAGGCTTGTTCCGGTGTTAGTAGA 479
Query 480 AGCTGCAACTACCGGGAAA-TTGATAGATCTTCAAGATATATTGGAGCGATTCGCGTTCG 538
||||||||| ||| ||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 480 AGCTGCAACCACC-GGAAAGTTGATAGATCTCCAAGACATATTGGAGCGATTCGCGTTCG 538
Query 539 ATAACATCTGTAAATTAGCTTTCAATGTTGATCCCGCTTGTCTCGGCAAAGACGGAGCCG 598
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| |
Sbjct 539 ATAACATCTGTAAATTAGCTTTCAATGTTGATTGCGCTTGTCTCGGCCACGACGGAGCGG 598
Query 599 CCGGTGTAAACTTCATGCGGGCTTTCGAAACCGCGGCGACGATCATATCGCAACGGTTTC 658
||||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct 599 TCGGTGTAAACTTCATGCGGGCCTTCGAAACCGCTGCGACGATTATATCGCAGCGGTTTC 658
Query 659 GGTCTGTGGCTTCGTGTTCATGGAAGATTAAAAAGAAACTTAACATTGGATCAGAGAGAG 718
|||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 659 GGTCGGTGGCTTCGTGTGCATGGAGGATTAAAAAGAAACTTAACATTGGATCAGAGAGAG 718
Query 719 TCCTGAGAGAATCAATCGCGACAGTCCATAAATTCGCAGACGAGATCGTGCGTAAGAGGA 778
| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 719 TTCTGAGAGAATCAATCGCGACCGTCCATAAATTCGCAGACGAGATCGTGCGTAACAGGA 778
Query 779 TTGATCAAGGAAAATCAAGTGACCAGAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGG 838
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 779 TTGATCAAGGAAGATCAAGTGACCACAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGG 838
Query 839 AGGAGATGAATTCGCCGGAGATACTCCGTGACATTGTCATAAGTTTCATCCTTGCCGGGA 898
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 839 AGGAGATGAATTCGCCGGAGATACTCCGTGACATTGTCATAAGTTTCATCCTCGC-GGGA 897
Query 899 -GAGACACCACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAG 957
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CGAGACACGACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAG 957
Query 958 GTGGAAGATAAGATTCTACAAGAGCTAAACTCGATTCGAGCACGAACAGGGAAGCGAATC 1017
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 958 GTGGAAGATAAGATTCTGCAAGAGCTAAACTCGATTCGCGCACGAACTGGGAAGCGAATC 1017
Query 1018 GGGGAAGTTTACGGGTTTGAAGATCTTAA-ACTGATGAATTATCTTCACGCTGCGATAAC 1076
||||||||||||||||||||| ||||||| | |||||||||||||||||||||| |||||
Sbjct 1018 GGGGAAGTTTACGGGTTTGAACATCTTAAGA-TGATGAATTATCTTCACGCTGCTATAAC 1076
Query 1077 TGAATCTTTAAGATTGTATCCACCTGTGCCAGTGGACATAAAGAGTTGTGCTGAGGACAA 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 TGAATCTTTAAGATTGTATCCACCTGTGCCAGTGGACATAAAGAGTTGTGCTGAGGACAA 1136
Query 1137 TGTGTTGCCTGATGGGACATTTGTAGGTAAAGGTTGGGCAATAACCTATAACACGTTTGC 1196
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1137 TGTATTGCCTGATGGGACATTTGTAGGTAAAGGTTGGGCAATAACCTATAACATATTTGC 1196
Query 1197 CATGGGAAGGATGGAGAGTAGTTGGGGTAAAGATTGCGATCGGTTTGATCCCGAGAGGTG 1256
||||||||||||||||||| |||||| |||||||| ||||| |||||||| ||||||||
Sbjct 1197 AATGGGAAGGATGGAGAGTATTTGGGGGAAAGATTGTGATCGTTTTGATCCTGAGAGGTG 1256
Query 1257 GATTAATGAAACAAATGGT-GCTTTTAGAGGTGAGAATCCTTATAAGTTTCCTGCGTTTC 1315
|||| |||||||||||||| | ||||||||||||| |||||| |||||||||||||||||
Sbjct 1257 GATTGATGAAACAAATGGTTG-TTTTAGAGGTGAGGATCCTTCTAAGTTTCCTGCGTTTC 1315
Query 1316 ATGCGGGACCAAGGATTTGTGTAGGGAAGGAGATGGCTTATATTCAGATGAAATCGATAG 1375
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1316 ATGCTGGACCAAGGATGTGTGTAGGGAAGGATATGGCTTATATTCAAATGAAATCGATAG 1375
Query 1376 TCGCTGCGGTTTTAGAGCGGTTTGTGGTTGAGGTTCCGGGGAAGGAGCGTCCTGAGATTC 1435
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1376 TCGCTGCGGTTTTAGAGCGGTTTGTGGTTGAGGTTCCAGGGAAGGAGCGTCCTGAGATTC 1435
Query 1436 TATTGTCGATGACACTTAGAATCAGAGGAGGTTTGTTTGCGAGGGTACACGAGAGATCTT 1495
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1436 TATTGTCGATGACACTTAGAATCAAAGGAGGTTTGTTTGCGAGGGTACAAGAGAGATCTT 1495
Query 1496 GA 1497
||
Sbjct 1496 GA 1497
> AT3G56630.1 | Symbols: CYP94D2 | cytochrome P450, family 94,
subfamily D, polypeptide 2 | chr3:20978937-20980632 FORWARD
LENGTH=1636
Length=1636
Score = 2069 bits (1120), Expect = 0.0
Identities = 1371/1493 (92%), Gaps = 13/1493 (1%)
Strand=Plus/Plus
Query 13 ATCTTCATCTTCCTCCTCTGTTTCCCTATCTTCATCTTCTAT-ATCTTCTTCCCGAAGAA 71
||| |||||| ||||||||||||||||||| ||||||||| | ||||||||||| |||||
Sbjct 29 ATCCTCATCTCCCTCCTCTGTTTCCCTATCGTCATCTTCT-TCATCTTCTTCCCCAAGAA 87
Query 72 TTCTTCTTCAGAATTTGGTTTCAAGTCGTATCCGATCGTCGGGAGCTTTCCTGGTCTAGT 131
||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct 88 TTCTTCTTCAGAATTTGGTTTCAAGTCGTATCCGATCGTTGGAAGCTTACCTGGTCTAGT 147
Query 132 GAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTGTCTCGATGTCCAACTCA 191
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 148 GAATAACCGTCACCGATTCCTCGACTGGACGGTGGAAACTCTGTCTCGATGCCCAACCCA 207
Query 192 AACAGCGATTTTCCGGCTACCAGGGAAGAAACAACTCATCATGACGGCGAATCCATCCAA 251
||| |||||||| |||| |||||||||| || || ||||||||||||||||| | ||
Sbjct 208 AACGGCGATTTTTCGGCGACCAGGGAAGCTGCAGTTCGTCATGACGGCGAATCCAGCTAA 267
Query 252 CGTCGAGTATATGCTCAAGACGAAGTTCGAGAGTTTCCCTAAAGGCGAACAGTTTACCTC 311
|||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| | |||
Sbjct 268 CGTCGAGTATATGCTCAAGACGAAATTCGAAAGTTTCCCTAAAGGCGAACGGTTCATCTC 327
Query 312 GGTTCTTGAGGATTTTCTCGGCCACGGGATTTTTAATTCCGACGGTGAGATGTGGTGGAA 371
| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 328 GATTCTCGAGGATTTTCTCGGCCGCGGGATTTTTAACTCCGACGGTGAGATGTGGTGGAA 387
Query 372 ACAGAGGAAGACGGCAAGCTACGAATTTAGTACTAAATCTCTCCGTGACTTTGTTATGAG 431
||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||||||
Sbjct 388 ACAGAGGAAGACGGCCAGTTATGAATTCAGTACTAAATCTCTCCGTGACTTCGTTATGAG 447
Query 432 CAACGTCACCGTCGAAATCAACACTAGGCTCGTTCCGGTGTTAGTAGAAGCTGCAACTAC 491
|||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |
Sbjct 448 CAACGTCACCGTCGAAATCAACACTAGGCTTGTTCCAGTGTTAGCAGAAGCTGCAACCAA 507
Query 492 CGGGAAATTGATAGATCTTCAAGATATATTGGAGCGATTCGCGTTCGATAACATCTGTAA 551
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 508 CGGAAAATTGATAGATCTTCAAGACATATTGGAGCGGTTCGCGTTCGATAACATCTGTAA 567
Query 552 ATTAGCTTTCAATGTTGATCCCGCTTGTCTCGGCAAAGACGGAGCCGCCGGTGTAAACTT 611
|||||||||||| |||||| | |||||||||||| | |||||||| ||||||||||||||
Sbjct 568 ATTAGCTTTCAACGTTGATTCAGCTTGTCTCGGCGACGACGGAGCAGCCGGTGTAAACTT 627
Query 612 CATGC-GGGCTTTCGAAACCGCGGCGACGATCATATCGCAACGGTTTCGGTCTGTGGCTT 670
||||| || |||| ||||| |||||||||||||| ||||||||||||| ||||||| ||
Sbjct 628 CATGCAGGCCTTT-GAAACGGCGGCGACGATCATCTCGCAACGGTTTCAGTCTGTGATTT 686
Query 671 CGTGTTCATGGAAGATTAAAAAGAAACTTAACATTGGATCAGAGAGAGTCCTGAGAGAAT 730
||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 687 CGTATTCATGGAAGATTAAAAAGAAACTCAACATTGGATCAGAGAGAGTTCTGAGAGAAT 746
Query 731 CAATCGCGA-CAGTCCATAAATTCGCAGACGAGATCGTGCGTAAGAGGATTGATCAAGGA 789
||||| || | |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 747 CAATCATGATC-GTCCATAAATTCGCAGACGAGATCGTGCGTAACAGGATTGAACAAGGA 805
Query 790 AA-ATCAAGTGACCAGAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGAGGAGATGAA 848
|| | |||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 AAGGT-AAGTGATCACAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGAGGAGATGAA 864
Query 849 TTCGCCGGAGATACTCCGTGACATTGTCATAAGTTTCATCCTTGCCGGGA-GAGACACCA 907
||| ||||||||||| ||||| ||||||||||||||||| |||| | ||| ||||||| |
Sbjct 865 TTCTCCGGAGATACTTCGTGATATTGTCATAAGTTTCATACTTG-CAGGACGAGACACTA 923
Query 908 CTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGTGGAAGATA 967
||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct 924 CTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTGCTCTCTATGCATCCAGAAGTGAAAGATA 983
Query 968 AGATTCTACAAGAGCTAAACTCGATTCGAGCACGAACAGGGAAGCGAATCGGGGAAGTTT 1027
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 984 AGATTCTACAAGAGCTAAACTCGATTCGAGAACGAACAGGGAAGCGAATCGGGGAAGTTT 1043
Query 1028 ACGGGTTTGAAGATCTTAAACTGATGAATTATCTTCACGCTGCGATAACTGAATCTTTAA 1087
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1044 ACGGGTTTGAAGATCTTAAACTGATGAATTATCTTCACGCAGCGATAACTGAATCTCTAC 1103
Query 1088 GATTGTATCCACCTGTGCCAGTGGACATAAAGAGTTGTGCTGAGGACAATGTGTTGCCTG 1147
|||||||||| || ||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 1104 GATTGTATCCGCCAGTGCCAGTGGATACAATGAGTTGTGCTGAGGACAATGTGTTGCCTG 1163
Query 1148 ATGGGACATTTGTAGGTAAAGGTTGGGCAATAACCTATAACACGTTTGCCATGGGAAGGA 1207
||||||||||| |||| |||| ||||| |||| ||||||| ||| ||| ||||| ||||
Sbjct 1164 ATGGGACATTTATAGGGAAAGATTGGGGGATAAGCTATAACGCGTATGCGATGGGGAGGA 1223
Query 1208 TGGAGAGTAGTTGGGGTAAAGATTGCGATCGGTTTGATCCCGAGAGGTGGATTAATGAAA 1267
||||||||| |||||| ||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1224 TGGAGAGTATTTGGGGGAAAGATTGCGATCGGTTTGATCCTGAGAGGTGGATTGATGAAA 1283
Query 1268 CAAATGGTGCTTTTAGAGGTGAGAATCCTTATAAGTTTCCTGCGTTTCATGCGGGACCAA 1327
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 CAAATGGTGGTTTTAGAGGTGAGAATCCTTATAAGTTTCCTGCGTTTCATGCGGGACCAA 1343
Query 1328 GGATTTGTGTAGGGAAGGAGATGGCTTATATTCAGATGAAATCGATAGTCGCTGCGGTTT 1387
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 GGATGTGTTTAGGGAAGGAGATGGCTTATATTCAGATGAAATCGATAGTCGCTGCGGTTT 1403
Query 1388 TAGAGCGGTTTGTGGTTGAGGTTCC-GGG--GAAGGAGCGTCCTGAGATTCTATTGTCGA 1444
||||| ||||||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct 1404 TAGAGAGGTTTGTGGTTGAGGTTCCAGGGAAGAAGGAGCGTCCTGAGATTCTAATGTCGG 1463
Query 1445 TGACACTTAGAATCAGAGGAGGTTTGTTTGCGAGGGTACACGAGAGATCTTGA 1497
|||||||||||||||||||||||||| || ||| ||||| || |||||||||
Sbjct 1464 TGACACTTAGAATCAGAGGAGGTTTGAATGTGAGAGTACAAGAAAGATCTTGA 1516
> AT5G33441.1 | Symbols: | pseudogene, similar to cytochrome P450-like
protein, blastp match of 46% identity and 6.5e-67 P-value
to GP|20804570|dbj|BAB92262.1||AP003232 cytochrome P450-like
protein {Oryza sativa (japonica cultivar-group)} | chr5:12737079-12738581
REVERSE LENGTH=1503
Length=1503
Score = 701 bits (379), Expect = 0.0
Identities = 597/697 (86%), Gaps = 36/697 (5%)
Strand=Plus/Plus
Query 805 AAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGAGGAGATGAATTCGCCGGAGATACTC 864
|||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||
Sbjct 834 AAGGAAGATTTGCTTTCTCGGTTTATTAGCAAGGAGGAGATGAATTCTCTGGAGATACTT 893
Query 865 CGTGACATTGTCAT-AAGTTTCATCCTTGCCGGGA-GAGACACCACTTCCTCTGCTTTGA 922
||||| |||||||| |||||| || || | |||| | ||||| ||||||||||||||||
Sbjct 894 CGTGATATTGTCATAAAGTTTTATTCTCG-AGGGACGTGACACGACTTCCTCTGCTTTGA 952
Query 923 GCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGTGGAAGATAAGATTCTACAAGAGC 982
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 953 GCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGTGGAAGATAAAATTCTAAAAGAGC 1012
Query 983 TAAACTCGATTCGAGCACGAACAGGGAAGCGAATCGGGGAAGTTTACGGGTTTGAAGATC 1042
|||| | |||||| ||||||||| |||||| ||| |||||||||||||| |||||||||
Sbjct 1013 TAAAATTGATTCGGGCACGAACAAGGAAGCAAATTAGGGAAGTTTACGGGATTGAAGATC 1072
Query 1043 TTAAACTGATGAATTATCTTCACGCTGCGATAACTGAATCTTTAAGATTGTATCCACCTG 1102
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||
Sbjct 1073 TTAAACTGATGAATTATCTTCATGCAGCGATAACTGAATCTTTAAGATTGTATCCACATG 1132
Query 1103 TGCCAGTGGACATAAAGAGTTGTGCTGAGGACAATGTGTTGCCTGATGGGACATTTGTAG 1162
||||||| || | || |||||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 1133 TGCCAGTTGATACAATGAGTTGTGTTGAGGACAATGTGTTGCTTGATGGGACATTTATAG 1192
Query 1163 GTAAAGGTTGG-GCAATAACCTATAACACGTTTGCCATGGGAAGGATGGAGAGTAGTTGG 1221
| ||| |||| | | ||| |||||| ||| ||| ||||| ||||||||||||| ||||
Sbjct 1193 GGAAATCTTGGAGGA-TAAGCTATAATGCGTATGCGATGGGGAGGATGGAGAGTATTTGG 1251
Query 1222 GGTAAAGATTGCGATCGGTTTGATCCCGAGAGGTGGATTAATGAAACAAATGGT-GCTTT 1280
|| ||||||||||| |||||||||| |||||||||||| |||||||||||||| | |||
Sbjct 1252 GGGAAAGATTGCGAAAGGTTTGATCCTGAGAGGTGGATTGATGAAACAAATGGTTG-TTT 1310
Query 1281 TAGAGGTGAGAATCCTTATAAGTTTCCTGCGTTTCATGCGGGACCAAGGATTTGTGTAGG 1340
|||||||||||||||| |||||||||||||||| | | || | | | | | |
Sbjct 1311 -AGAGGTGAGAATCCTTTTAAGTTTCCTGCGTTT-A-G-GG-A--A----T--G-G--G- 1353
Query 1341 GAAGGAGATGGCTTATATTCAGATGAAATCGATAGTCGCTGCGGTTTTAGAGCGGTTTGT 1400
| |||||| |||||||||||||||||||| ||||| || |||||| |||||||
Sbjct 1354 -A------TGGCTTCTATTCAGATGAAATCGATAGACGCTGATGTGTTAGAGAGGTTTGT 1406
Query 1401 GGTTGAGGTTCC-GGG--GAAGGAGCGTCCTGAGATTCTATTGTCGATGACACTTAGAAT 1457
|||||| | ||| ||| |||||||| |||||| ||| |||||||||| |||||||||||
Sbjct 1407 GGTTGAAGCTCCAGGGAAGAAGGAGCATCCTGATATTTTATTGTCGATTACACTTAGAAT 1466
Query 1458 CAGAGG-AGGTTTGTTTGCGAGGGTACACGAGAGATC 1493
| ||| |||||| |||| ||||||||| ||||||||
Sbjct 1467 GA-AGGGAGGTTTCTTTGTGAGGGTACAAGAGAGATC 1502
Score = 265 bits (143), Expect = 1e-69
Identities = 239/285 (84%), Gaps = 7/285 (2%)
Strand=Plus/Plus
Query 457 AGGCTCGTTCCGGTGTTAGTAGAAGCTGCAACTACCGGGAAATTGATAGATCTTCAAGAT 516
||||| |||| |||||| | ||||||||| || ||||| |||||||||||| |||||||
Sbjct 548 AGGCTTGTTCGGGTGTTTGAAGAAGCTGCGACCACCGGAAAATTGATAGATATTCAAGAC 607
Query 517 ATATTGGAGCGATTCGCGTTCGATAACATCTGTAAATTAG-CTTTCAATGTTGATCCCGC 575
||||||||| |||| ||||| ||||| || || ||| ||| |||| || ||| || |
Sbjct 608 ATATTGGAGAGATTTGCGTTTGATAATATTTGCAAAATAGCCTTT-AACGTTAAT---TC 663
Query 576 TTGTCTCGGCAAAGACGGAGCCGCCGGTGTAAACTTCATGCGGGCTTTCGAAACCGCGGC 635
| | | || | ||| |||| |||||||||||||||||||| ||||||||||| | |||
Sbjct 664 ATAT-T-GGTGACGACAGAGCTGCCGGTGTAAACTTCATGCGTGCTTTCGAAACGGTGGC 721
Query 636 GACGATCATATCGCAACGGTTTCGGTCTGTGGCTTCGTGTTCATGGAAGATTAAAAAGAA 695
|||||||||||| ||| |||||| |||||||| ||||| || ||||||||||||||||||
Sbjct 722 GACGATCATATCACAATGGTTTCAGTCTGTGGTTTCGTATTTATGGAAGATTAAAAAGAA 781
Query 696 ACTTAACATTGGATCAGAGAGAGTCCTGAGAGAATCAATCGCGAC 740
|||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct 782 ACTTAACATTGGATCAGAGAGAGTTTTGAGAGAATTAATCGTGAC 826
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73845001695
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5