BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg314017 Length=414 Score E Sequences producing significant alignments: (Bits) Value AT1G35410.1 | Symbols: | Protein of unknown function (DUF1184)... 370 6e-102 AT1G35400.1 | Symbols: | Protein of unknown function (DUF1184)... 335 2e-91 AT1G35365.1 | Symbols: | Protein of unknown function (DUF1184)... 152 2e-36 AT3G27900.1 | Symbols: | Protein of unknown function (DUF1184)... 130 1e-29 > AT1G35410.1 | Symbols: | Protein of unknown function (DUF1184) | chr1:13024161-13024941 FORWARD LENGTH=450 Length=450 Score = 370 bits (200), Expect = 6e-102 Identities = 228/241 (95%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 174 TTTTGAATACTACATCCAAGAGCTTAAGAAGCTAGAAGAGAAGTTGAGGTCTGCCAAGGA 233 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 TTTTGAATACTACAACCAAGAGCTTAAGAAGCTAGAAGAGAAGTTGAGGTCTGCCAAGGA 272 Query 234 ATTTTCAGAGGCCAATGGGTTTGTGAGGGAAGAGATAAAGTCTAACATTGTTCACTTGTG 293 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 273 ATTTTCAGAGGCAAATGGGTTTGTGAGGGAAGAGATAAAGTCTAACATTCTTCACTTGTG 332 Query 294 GAAGTCTCTCTTTGAAGCAACACCGGAAGTGATAAACCCTAATAAGCCTATACTTCTTGA 353 |||||||||||||||||||||||| ||||||| |||| |||||||| ||||| ||||||| Sbjct 333 GAAGTCTCTCTTTGAAGCAACACCAGAAGTGAGAAACTCTAATAAGACTATAGTTCTTGA 392 Query 354 GCTGTTTAGGCCTATCGAGAACGAAGTTTGCTGTCGTCGTCTTGCTTCTTTACTCATATG 413 ||||||||| |||||||| ||||||||||||||||||| | | ||||||||||||||||| Sbjct 393 GCTGTTTAGTCCTATCGATAACGAAGTTTGCTGTCGTC-T-T-GCTTCTTTACTCATATG 449 Query 414 A 414 | Sbjct 450 A 450 Score = 165 bits (89), Expect = 3e-40 Identities = 112/123 (91%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 45 GAGATTACCACAA-ACTGATCTCAACAAGGAGAAGGAGAAGCAGAAAGAAGAGACTATAC 103 ||| || ||| || |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 15 GAG-TTGCCAAAAGACTGATCTCAACAAGGAGAAGGAGAATCAGAAAGAAGAGGCTATAC 73 Query 104 GACTCGGAGTTGAGCTCTCGCTCTTTGTGGCTGAAGCAATGTTCATATTATCTGATGACC 163 ||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||| Sbjct 74 GACCCGGAGTTAAGCTCTCGCTCTTTGTGGCTGAAGCAATGTTCCTCTTATCTGATAACC 133 Query 164 TAC 166 ||| Sbjct 134 TAC 136 > AT1G35400.1 | Symbols: | Protein of unknown function (DUF1184) | chr1:13018289-13019198 FORWARD LENGTH=621 Length=621 Score = 335 bits (181), Expect = 2e-91 Identities = 224/244 (92%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 174 TTTTGAATACTACATCCAAGAGCTTAAGAAGCTAGAAGAGAAGTTGAGGTCTGCCAAGGA 233 |||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 234 TTTTGAATACTACAACCAAGAGATGAAGAAGCTAGAAGAGAAGTTGAGGTCTGCCAAGGA 293 Query 234 ATTTTCAGAGGCCAATGGGTTTGTGAGGGAAGAGATAAAGTCTAACATTGTTCACTTGTG 293 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 294 GTTTTCAGAGGCAAATGGGTTTGTGAGGGAAGAGATAAAGTCTAACATTCTTCACTTGTG 353 Query 294 GAAGTCTCTCTTTGAAGCAACACCGGAAGTGAT-AAACCCTAATAAGCCTATACT-TCTT 351 ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| | || Sbjct 354 GAAGTCTCTCTTTGAAGCAACACCGGAAGTGATGAAACC-TAATAAGCTTATACTAT-TT 411 Query 352 GAGCTGTTTAGGCCTATCGAGAACGAAGTT-TGCTGTCGTCGTCTTGCTTCTTTACTCAT 410 ||| |||||| ||||||| || ||||| | | |||||||| |||||||||||||||||| Sbjct 412 GAGATGTTTATGCCTATCCAGGTCGAAGATCT-CTGTCGTCATCTTGCTTCTTTACTCAT 470 Query 411 ATGA 414 |||| Sbjct 471 ATGA 474 Score = 171 bits (92), Expect = 6e-42 Identities = 143/166 (86%), Gaps = 9/166 (5%) Strand=Plus/Plus Query 1 ATGGAATCGATGTCAATGACTGACCGTGTTGTCCGTAACAACAAGAGATTACCACAAACT 60 |||||||| ||||| |||||||||||| |||||||||||||| | | | | ||| Sbjct 1 ATGGAATCAATGTCTATGACTGACCGTATTGTCCGTAACAAC---A-A--A--A-GGACT 51 Query 61 GATCTCAACAAGGAGAAGGAGAAGCAGAAAGAAGAGACTATACGACTCGGAGTTGAGCTC 120 ||||||||||||| |||||||| |||||||||||| ||||||||| ||||||| ||||| Sbjct 52 AATCTCAACAAGGAAAAGGAGAATCAGAAAGAAGAGGCTATACGACCCGGAGTTAAGCTC 111 Query 121 TCGCTCTTTGTGGCTGAAGCAATGTTCATATTATCTGATGACCTAC 166 ||||||||||||||||||||||||||| | ||||||||| |||||| Sbjct 112 TCGCTCTTTGTGGCTGAAGCAATGTTCCTCTTATCTGATAACCTAC 157 > AT1G35365.1 | Symbols: | Protein of unknown function (DUF1184) | chr1:12991392-12992145 FORWARD LENGTH=540 Length=540 Score = 152 bits (82), Expect = 2e-36 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 79 GAGAAGCAGAAAGAAGAGACTATACGACTCGGAGTTGAGCTCTCGCTCTTTGTGGCTGAA 138 |||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||| Sbjct 133 GAGAAGCAGAAAGAGGAGGCTATACGACTCGGAGTTGAGCTCTCACTCTTTATGGCTGAA 192 Query 139 GCAATGTTCATATTATCTGATGACCTACGTTCTA 172 |||||||||||||||||||||||||||||||||| Sbjct 193 GCAATGTTCATATTATCTGATGACCTACGTTCTA 226 Score = 87.9 bits (47), Expect = 7e-17 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 1 ATGGAATCGATGTCAATGACTGACCGTGTTGTCCGTAACAACAAGAGATTACCACA 56 |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 1 ATGGAATCAATGTCAACGACTGACCGCGTTGTCCGTAACAACAAGAGATTACCACA 56 > AT3G27900.1 | Symbols: | Protein of unknown function (DUF1184) | chr3:10352905-10353639 REVERSE LENGTH=735 Length=735 Score = 130 bits (70), Expect = 1e-29 Identities = 90/100 (90%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 73 GAGAAGGAGAAGCAGAAAGAAGAGACTATACGACTCGGAGTTGAGCTCTCGCTCTTTGTG 132 |||||||||| ||||||||| ||| |||||||| | |||||||||||||||||||||||| Sbjct 109 GAGAAGGAGATGCAGAAAGATGAGGCTATACGATTGGGAGTTGAGCTCTCGCTCTTTGTG 168 Query 133 GCTGAAGCAATGTTCATATTATCTGATGACCTACGTTCTA 172 |||||| ||||| || |||||||||| |||||||||||| Sbjct 169 GCTGAAACAATGGTCTTATTATCTGACAACCTACGTTCTA 208 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19604422110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5