BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg314116 Length=684 Score E Sequences producing significant alignments: (Bits) Value AT1G44010.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 811 0.0 > AT1G44010.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15640.1); Has 211 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 211; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16714622-16715564 FORWARD LENGTH=778 Length=778 Score = 811 bits (439), Expect = 0.0 Identities = 593/668 (89%), Gaps = 7/668 (1%) Strand=Plus/Plus Query 1 ATGGAAGGCCCTTTGCTAACCAAGAGTGAGCACATCAAAATCGATGGTGATTCTTCATCG 60 ||||| || |||||||||||||||| |||||||||||||| |||| ||||||||||| Sbjct 35 ATGGAGGGGCCTTTGCTAACCAAGAACAAGCACATCAAAATCCATGGCGATTCTTCATCA 94 Query 61 AATGATGAGCATAATGTCAACATTACAATCACTGACGATTCTTCATCAACACCACGTGAA 120 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 95 AATGATGAGCATAATGTCAACATTACAATCACTAACGATTCTTCATCAACACCACACGGC 154 Query 121 GCCAAGGCTGTTGAACGGTGTATTCCTTCTTGCACAGGAGAAATGGAGTGGTGTTGTTTC 180 | || |||||||||||||||| | | |||||| ||||||||||||||| ||||||| Sbjct 155 GTTAATATTGTTGAACGGTGTATT-C--CATGCACAAGAGAAATGGAGTGGTTTTGTTTC 211 Query 181 ATCGAGTTTGTTCTCAATATTGTCCAAATTGTTGCAGCTTTTGTAGTTGTGAATCGGGCA 240 |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 212 ATCGAGTTTGTTTTGAATATTGTCCAAATTGTTGCAGCTTTTGTAGTTGTGACTCGGGCA 271 Query 241 AAAGATGAACATCCAGAAACATCATTTCTTATATGGATCATCGGTTACACTTGTGGCTGT 300 |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||| Sbjct 272 AAAGATGAACATCCAGGAACATCATTTCTTGTATGGATCATTGGTTACACTTGTGGATGT 331 Query 301 GTTGCTATTCTTCTTATTCAATTTATAAACTGTGTTTCCTCAAGAAGCTACGAGGTGATC 360 ||||| |||||||||||||| ||||| ||| || |||| |||||||||||||||| |||| Sbjct 332 GTTGCCATTCTTCTTATTCAGTTTATTAACCGTATTTCGTCAAGAAGCTACGAGGAGATC 391 Query 361 ATAGAC-TTTGTGACGGAGATATTTGAATATTTCTTTGTGGGTTGGGTTTTGCTGTTTCT 419 || ||| ||| ||| | | |||| |||||||||||| || ||||||||| || ||||||| Sbjct 392 ATGGACGTTT-TGAAGAATATATGTGAATATTTCTTCGTTGGTTGGGTTGTGTTGTTTCT 450 Query 420 TTGGATTTATCATAGCAGTTCATCATCTCTATATGATAATACTCAACATTTCTGGTTATG 479 |||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 451 TTGGATGTATCATAGTAGTTCTTCATCTCTATATGATAATACTCAATATTTCTGGTTATG 510 Query 480 TATGGCTTTTCTTGCTTTCACTTGCATTCGATATATACCGGCTCATTTAATATTTTCAGC 539 |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 511 TATGGCTTTTCTTGCTTTCACTTGCATTCGATATGTACCGGCTCGTTTAATATGTTCAGC 570 Query 540 GATATGCTTCCTTTTCGTTGTGATAATATGGATTTGCGCCGCTGTGTTAGGCACCACCCC 599 |||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||| Sbjct 571 AATATGCTTTATTTTCGTTGTGATAATATGGTTTTGCGCCGATGTGTTAGGCACAACCCC 630 Query 600 TAATACGTTTGTTTATGTTGCATTCCTTATAATTGTCATTGGAATTCTTAAAGT-AGTTC 658 | || ||||| | ||| || |||||||||| || ||||||||||||||||||| | || Sbjct 631 GAGTATGTTTGCTAATGCTGTATTCCTTATAGTTTTCATTGGAATTCTTAAAGTCA-TTG 689 Query 659 AAGAGGTT 666 | |||||| Sbjct 690 AGGAGGTT 697 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33104302873 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5