BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314297
Length=1167
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48625.1 | Symbols: | pseudogene of F-box family protein | ... 922 0.0
AT5G41490.1 | Symbols: | F-box associated ubiquitination effec... 272 5e-72
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 267 2e-70
AT5G41494.1 | Symbols: | pseudogene of F-box family protein | ... 250 2e-65
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 231 9e-60
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 206 5e-52
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 198 9e-50
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 189 5e-47
AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 187 2e-46
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 176 4e-43
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 119 7e-26
AT2G04730.1 | Symbols: | pseudogene, F-box protein-related, co... 108 2e-22
AT3G22870.1 | Symbols: | F-box and associated interaction doma... 87.9 2e-16
AT3G20705.1 | Symbols: | pseudogene, hypothetical protein | ch... 76.8 4e-13
AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7... 69.4 7e-11
> AT1G48625.1 | Symbols: | pseudogene of F-box family protein
| chr1:17979561-17980815 FORWARD LENGTH=1255
Length=1255
Score = 922 bits (499), Expect = 0.0
Identities = 630/690 (91%), Gaps = 21/690 (3%)
Strand=Plus/Plus
Query 387 GGCGGATCAAAACCCGATATTCTCACCATGCATTCTGCGGAAAGGACAATACGTACATGT 446
||| |||||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||
Sbjct 411 GGCAGATCAAAACCCGATATTCTCACCACGCATTCTCCGGAAGGGATAGTACGTACATGT 470
Query 447 TCAACTA--CTCTC---T-CG-GAATAAGAGTTCATGTCGCAGCCACAAATTATTGAGGT 499
|||| || ||||| | || |||||||| |||||||||||||||||||||||||||||
Sbjct 471 TCAATTACTCTCTCGGATACGAGAATAAGAATTCATGTCGCAGCCACAAATTATTGAGGT 530
Query 500 TTATAGATTATCATAGGAATTACCGCGGCCTACACCAAtttttttGGTATGAAATCTATG 559
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 531 TTATAGATTATCATTGGAATTATCGCGGCCTACACCAATTTTTTTGGTATGAAATCTACG 590
Query 560 ATTTTAACTCTGATTTATGGACAACTCTTGATGTCACTCCATACTGGTTTATAGCTATTT 619
||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 591 ATTTTGACTCGGATTTATGGACAACTCTTGATGTCACTCCACACTGGTTTATAGTTATTT 650
Query 620 CTCAAAGTGGTGTTTCCCTCATGGGAAACACATACTGGTGTGCTAGGATA-AGGAGCGGC 678
||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct 651 CTCAAAGTGGTGTTTCCCTCAAGGGAAACACATACTGGTGTGCTAGGA-AGAGGAGCGGC 709
Query 679 GGTTATAGCGATCACATTATTTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTG 738
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 710 GGTTATAGCGATCACATTATTTGTTTTGATTTTACTAGAGAGAGATTTGGACCGCTTTTG 769
Query 739 CCTTTGCCATTTAGCGTTAG-G---G--ATCATTCATGTGTGATTTTATCTTGTGTTAGA 792
|||||||| |||||| ||| | | |||||||||||||||||||||||||||||||
Sbjct 770 CCTTTGCCGTTTAGCTTTATTGATCGTCATCATTCATGTGTGATTTTATCTTGTGTTAGT 829
Query 793 GAAGAGAAGCTTGCAGTTTTATTTCAACACCA--A--ATGTATTATAAATATGAAGTTGA 848
|||||||||||||||||||||||||| || | | | || |||||| ||| ||||||
Sbjct 830 GAAGAGAAGCTTGCAGTTTTATTTCAGTACAAGGACCAC-TACTATAAAAATGTAGTTGA 888
Query 849 AATATGGATTACGGTTAAGCTTGAGACCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAAT 908
|||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 889 AATATGGATTACAGCTAAGCTTGAGGCCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAAT 948
Query 909 AAATACGGGGCCAATTATACACACAAGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCAT 968
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 949 AAATACGGGGCCAATTATACACACGAGTTTCTTCATTAACGAGGAAAAGAAAGTCGCCAT 1008
Query 969 TGGGTTTAATGACAATCGCAAA-CAATTAACATCATTGGAGAGGCTGGATACTTTAGAGA 1027
||||||||||||||||||||| |||| ||||||||||| ||||| || |||||||||||
Sbjct 1009 CGGGTTTAATGACAATCGCAAAACAATCAACATCATTGGCGAGGCGGGGTACTTTAGAGA 1068
Query 1028 ATTGGATCTTGGAGAACATGCAGAGCCATA 1057
|||||||||||||||||||||||| |||||
Sbjct 1069 ATTGGATCTTGGAGAACATGCAGAACCATA 1098
Score = 479 bits (259), Expect = 3e-134
Identities = 350/392 (89%), Gaps = 13/392 (3%)
Strand=Plus/Plus
Query 1 ATGACGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAAGAGATTTTGTCAAGGGTT 60
||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1 ATGGCGACGATGATCTCTAATCTTCCAAGGGATTTGATGGAAGAGATTTTGTCTAGGGTT 60
Query 61 CCCTTGAAATCTATGAGAGCAGTGCGATTAACTTGCAAAAATTGGAACACTTTATCCAGA 120
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 61 CCCTTGAAATCTATGCGAGCAGTGCGATTAACTTGCAAAAATTGGCACACTTTATCCATA 120
Query 121 ACCATAAGTGAGAGCTTAACGAAGATGCAAATTACTAAATCAACAAGAGCAA-CAAGAGA 179
|||||||||||||| ||| |||||||| | |||| |||| ||||||||| || |||||||
Sbjct 121 ACCATAAGTGAGAGTTTAGCGAAGATGTACATTAGTAAAACAACAAGAG-AATCAAGAGA 179
Query 180 AGGGGAATCTACGATAATCATGTTGATGAATTACAAACTTTATTTAAAGAGTCTCGTTGT 239
|||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||
Sbjct 180 AGGGGAGTCTACGATAATCACGTTGATGAATTACAAACTTTGTTTAACGAGTCTCGTCGT 239
Query 240 CGATGACAACGTAGATCCATATACAGAGC-CTAAAGGTAAACTTACTTGCCTTACTCTTG 298
||| | || || ||||||| ||||| | ||||||||||| |||||| ||| |||||
Sbjct 240 CGA---C---GTTGACCCATATATAGAGCAC-AAAGGTAAACTAACTTGCTTTAATCTTG 292
Query 299 AGCACCAAGTCAAGATATCTCAAGTCTTTCTA-TGTGAGGGTTTA-TTGTTATGCATCTT 356
|||| |||||||||||||||||||||||| || | |||||||||| || |||||| | ||
Sbjct 293 AGCATCAAGTCAAGATATCTCAAGTCTTT-TACTATGAGGGTTTAATTTTTATGCGTATT 351
Query 357 GAAAGACGATACAATTACTACTAGGCTTGTGG 388
||||||||||||||||||||||||||||||||
Sbjct 352 GAAAGACGATACAATTACTACTAGGCTTGTGG 383
Score = 134 bits (72), Expect = 2e-30
Identities = 94/104 (90%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 1060 GAACCTGCACGAGGCAACA-ACAAAAAACATCAAAGCAGT-TCAGAAACACGTCTATTTG 1117
||| |||||| ||| |||| | |||||||||||||||||| | |||||||||||||||||
Sbjct 1148 GAAACTGCACCAGGGAACATA-AAAAAACATCAAAGCAGTAT-AGAAACACGTCTATTTG 1205
Query 1118 ATCTAAACATGTTGAGACTTGTCGCATTTGAGAAGGCAGTATCC 1161
||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1206 ATCGAAACATGTTGAGACTTGTCGCATTTGAGAAGAAAGTATCC 1249
> AT5G41490.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr5:16600445-16601608 FORWARD LENGTH=1164
Length=1164
Score = 272 bits (147), Expect = 5e-72
Identities = 412/532 (77%), Gaps = 49/532 (9%)
Strand=Plus/Plus
Query 542 tttGGTATGAAATCTATGATTTTAACTCTGATTTATGGACAACTCTTGATGTCACTCCAT 601
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 539 TTTGCTATGAAATCTATGATTTTGACTCTGATTTATGGACAACTCTTGATGTCACTTCAC 598
Query 602 ACTGGTTTATA-GCTATTTCTCAAA-GTGG--TGTTTCCCTCATGGGAAACACATACTGG 657
||| || ||| | |||| || | |||| |||||| ||| ||||||| | ||||||
Sbjct 599 ACTCGTGGATATGTTATT-CT-AGCTGTGGCGTGTTTC--TCAAGGGAAACGCTTACTGG 654
Query 658 TGTGCTAGGATAAGG-AGCGGC-G--GTTAT-AGCGATCACATTATTTGTTTTGATTTTA 712
|| | | | || | ||| | | | || | ||||||||| || | |||||| ||||
Sbjct 655 CCTGTT-GTAAAAAGTAGCT-CAGAAGCTAACATCGATCACATAATCTATTTTGACTTTA 712
Query 713 CAAGAGAGAGATTT-GGACCGCTTTTGCCTTTGCCATTTAGCGTTAGGGATC----AT-T 766
|||||||||| ||| || |||| | | ||||| || ||| ||| || |||| || |
Sbjct 713 CAAGAGAGAG-TTTCGGGCCGCCTCTACCTTTACCGTTTGGCGCTACAGATCGTGGATAT 771
Query 767 -CATGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAG-TTTTATTTCAACACCA 824
||| ||||| |||||||||||||| ||||||||||||||||| |||| ||||| ||| |
Sbjct 772 TCATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTT-TTTCAGCACTA 830
Query 825 AATGT-ATTATAAATATGAAGTTGAAATATGGATTACGGTTAAGCTTGAGACCGAAATGG 883
|| | || ||||||||||| |||| |||||| ||||| |||| ||||| |||||||||
Sbjct 831 CATTTCAT-ATAAATATGAATTTGAGATATGGGTTACGACTAAGATTGAGGCCGAAATGG 889
Query 884 TGTCGTGGAGCAAGTTCTTGAGAATAAATACGGGGCC-AATTATACACA--C-AAGT--T 937
||||||||||||| ||||||||||| || ||| || ||| ||| | | | || | |
Sbjct 890 TGTCGTGGAGCAAATTCTTGAGAATGGATTTGGGACCTAAT-ATAGATATTCCAATTACT 948
Query 938 T-CTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTTT--A--AT-GACAAT--CGCAA 989
| ||||||||||||||| |||||||| ||| |||||| | || || ||| | |||
Sbjct 949 TTCTTCATTGACGAGGAGAAGAAAGTTTTCAT-GGGTTTTGAGCATAGAGAATATCCCAA 1007
Query 990 -ACA---ATTAACATCATTGGAGAGGCTGGATACTTTA-GAGAATTGGATCT 1036
| | ||||||||||| ||||||||| ||| |||| || ||||||||||
Sbjct 1008 GAGATTTATTAACATCATCGGAGAGGCTAAATA-TTTAAGAAAATTGGATCT 1058
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 267 bits (144), Expect = 2e-70
Identities = 297/366 (81%), Gaps = 29/366 (8%)
Strand=Plus/Plus
Query 10 ATGATCTCCAATCTTCCAAGGGATTTGATAGAAGAGAT-TTTGTCAAGGGTTCCCTTGAA 68
|||||| || ||||||||| ||||||||||||||| || || ||||||||| || |||
Sbjct 1 ATGATCACCGATCTTCCAAAGGATTTGATAGAAGAAATCCTT-TCAAGGGTTTCCATGAC 59
Query 69 ATCTATGAGAGCAGTGCGATTAACTTGCAAAAATTGGAACACTTTATCCAGAACCATAAG 128
||||||||||| ||||||||||||||||||| |||||| ||||||||| | || ||
Sbjct 60 ATCTATGAGAGTTGTGCGATTAACTTGCAAAAGTTGGAATACTTTATCC---A--AT-AG 113
Query 129 TGAGAGC-TTAACGAAGATGCAAATTACTAAA-TCAACAAGAGCAACAAGAGAAGGGGAA 186
||||||| |||| ||||||||| ||| |||| | || | |||| |||||||| |||
Sbjct 114 TGAGAGCTTTAA-GAAGATGCACATTGGTAAAGT-TAC---ATCAACGAGAGAAGGAGAA 168
Query 187 TCTACGATAATCATGTTGATGA-ATTACAAACTTTATTTAAAGAGTCTC-GTTGTCGAT- 243
|||| | | ||||||||||| | ||||||| |||| ||| | ||| | | || || ||
Sbjct 169 TCTAGGGTGATCATGTTGAT-AGATTACAATCTTTTTTTGATGAG-CGCTGTCCTC-ATG 225
Query 244 GACAACGTAGATCCATATACAGAGCCTAAAGGTAAACTTACTTGCCTTACTCTTGAGCAC 303
|| |||| ||||||| || |||| |||||||||||||| | || |||| || |
Sbjct 226 GATGACGTTGATCCATCTATAGAGTTTAAAGGTAAACTTA---G--TT-GTCTTAAGGAA 279
Query 304 CAAGTCAAGATATCTCAAGTCTTTCTA-TGTGAGGGTTTATTGTTATGCATCTTGAAAGA 362
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 280 CAAGTCAAGATATCTCAAGTCTTTC-ACTGTGAGGGTTTATTGTTATGCATCTTGAAAGA 338
Query 363 CGATAC 368
||||||
Sbjct 339 CGATAC 344
Score = 215 bits (116), Expect = 9e-55
Identities = 309/396 (78%), Gaps = 37/396 (9%)
Strand=Plus/Plus
Query 539 ttttttGGTATGAAATCTATGATTTTAACTCTGATTTATGGACAACTCTTGATGTCACTC 598
||| |||| |||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 521 TTTGTTGGCATGAAATCTACGATTTTGACTCTGATTTATGGACAACTCTTGATGTCACTC 580
Query 599 CATACTGGTTTATA--G-CTA-TT--TCT-----CAAAGTGGTGTTTCCCTCAT-GGGAA 646
|| | |||| |||| | ||| || ||| | ||| | || || |||| |||||
Sbjct 581 CACATTGGTATATATTGTCTAATTGGTCTTGTGTCCAAG-GC-GTCTCTCTCAAAGGGAA 638
Query 647 ACACATACTGGTGTGCTAGGATAAGGAG-CG--GC-GGTTATAGCGATCACATTATTTGT 702
||| |||||||||||||| | ||| | | | ||||| | |||| || || |||
Sbjct 639 -CACTTACTGGTGTGCTAG-AGAAGAAAACTCAGATGGTTACA---ATCATATAATCTGT 693
Query 703 TTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAGGGAT 762
|||||||||||||||||||||||||| |||||| ||||| | || ||| ||||| |||
Sbjct 694 TTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCTACCGGTTAACGTTATAGAT 753
Query 763 CATTCAT--G--T--GTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTT 816
|| || | | |||| || ||||||||||||||||| |||| |||| | |||||||
Sbjct 754 AATGAATATGAATATGTGACTTCATCTTGTGTTAGAGAAGGGAAGATTGCGGCTTTATTT 813
Query 817 CAACACCAAATGTATT-ATAA--ATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGA 872
|| ||| || | ||| ||| |||||| | |||| |||||||||||| |||| ||||
Sbjct 814 CAGCAC-AAC-G-ATTCATATCCATATGA-GCTTGAGATATGGATTACGACTAAGATTGA 869
Query 873 GACCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAAT 908
| | |||||||||||||||| |||||||||||||||
Sbjct 870 GGCGGAAATGGTGTCGTGGAACAAGTTCTTGAGAAT 905
> AT5G41494.1 | Symbols: | pseudogene of F-box family protein
| chr5:16602589-16603438 FORWARD LENGTH=850
Length=850
Score = 250 bits (135), Expect = 2e-65
Identities = 420/549 (77%), Gaps = 53/549 (10%)
Strand=Plus/Plus
Query 539 ttttttGGTATGAAATCTATGATTTTAACTCT-GATTTATGGACAACTCTTGATGTCACT 597
||||| |||| |||||||| |||||| ||| | |||| |||||||||||||||||||| |
Sbjct 143 TTTTTGGGTACGAAATCTACGATTTTGACT-TAGATTCATGGACAACTCTTGATGTCAGT 201
Query 598 CCATACTGGTTTATAGCTAT-TTCTCAAAGTGGTGTTTCCCTCATGGGAAACACATACTG 656
||| ||||| |||| ||| || | | ||| || | || | | ||||||| |||||
Sbjct 202 CCACACTGGCATATA-ATATCTTGTGACCTTGGCATTACTCTTAAGAGAAACACTTACTG 260
Query 657 GTGTGCTAG-G--AT-AA-GGAGCGGCGGTTATAG-CGATCACATTATTTGTTTTGATTT 710
| |||||| | || || || | ||| | ||||||||| || |||||||||||
Sbjct 261 GCATGCTAGAGAAATGAATTTAGAAGAAAATATCGTCGATCACATAATATGTTTTGATTT 320
Query 711 TACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAGGGATCAT--TCA 768
|||||||||||||||| |||||||| ||||| |||| |||||||| ||| |||| | |
Sbjct 321 TACAAGAGAGAGATTTAGACCGCTTCTGCCTCTGCCGGTTAGCGTTGGGGTTCATGATTA 380
Query 769 TG----TGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTTCA--ACAC 822
|| | ||| ||||||| |||||||||||||||||||||| | ||||||||| ||||
Sbjct 381 TGAATATTTGACTTTATCTCGTGTTAGAGAAGAGAAGCTTGCCGCTTTATTTCAGCACAC 440
Query 823 CAAATGTATTATAAATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGAGACCGAAAT 881
| ||| | || ||||| || |||||||||||||||| |||| ||||| | |||||
Sbjct 441 CGAAT-CA-AATCCATATG-AGCTTGAAATATGGATTACAACTAAGATTGAGGCTGAAAT 497
Query 882 GGTGTCGTGGAGCAAGTTCTTGAGAATAAATACGGGGCCA-AT-TATA---CACA-C-A- 933
||||||||||||||||||||||||||| ||||||| || || ||| |||| | |
Sbjct 498 GGTGTCGTGGAGCAAGTTCTTGAGAATGGATACGGGACCTGATATATTGGTCACAACTAT 557
Query 934 A-GTT-----T-CTTCATTGACGAGGAAAAGAAAGTCGCCATTGGG-TTT-AATGA---C 981
| || | ||||||||||||||| |||||||||||||| ||| ||| ||||| |
Sbjct 558 ATGTGAAGGATACTTCATTGACGAGGAGAAGAAAGTCGCCAT-GGGATTTTAATGAAGAC 616
Query 982 A-AT--CG--C-AA-A-CAATTAACATCATTGGAGAGGCTGGATACTTTAGAGAATTG-G 1032
| | | | || | || ||| ||| |||||||||||||||||||| | | |||| |
Sbjct 617 AGAAGACATTCCAAGAACATTTAGCATTATTGGAGAGGCTGGATACTTAATA-AATTTAG 675
Query 1033 ATCTTGGAG 1041
|| ||||||
Sbjct 676 ATATTGGAG 684
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 231 bits (125), Expect = 9e-60
Identities = 424/560 (76%), Gaps = 54/560 (10%)
Strand=Plus/Plus
Query 533 ACCAAtttttttGGTATGAAATCTATGATTTTAACTC-TGATTTATGGACAACTCTTGAT 591
||| ||||||||||||||||||||| |||||| |||| || |||||||||||||||||||
Sbjct 525 ACC-ATTTTTTTGGTATGAAATCTACGATTTTGACTCTTG-TTTATGGACAACTCTTGAT 582
Query 592 GTCACTCCATACTGGTTTATAGCTAT-TTCTCAAAGTGGTGTTTCCCTCATGGGAAACAC 650
|||||||| | ||| |||| || | || | | | |||||||| | |||||||||
Sbjct 583 ATCACTCCACATTGGGGTATATCT-TGGACTTACCCTAGAGTTTCCCTTAAGGGAAACAC 641
Query 651 ATACTGGTGTGCTAG-GATAA-GGA-GC-GGCGG-TTATAGCGATCACATTATTTGTTTT 705
|||||| |||||| || || | | | || || | |||||||| || ||||||
Sbjct 642 TTACTGGCCTGCTAGAGA-AATGAACACAAAAGGTTTCCA-AGATCACATAATCTGTTTT 699
Query 706 GATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCG-TTAGGGATCA 764
||||||||||| ||||||||||| |||||| | ||| | || ||| | | | ||||
Sbjct 700 GATTTTACAAGTGAGAGATTTGGTCCGCTTCTACCTCTACC---TAGGGCTCAAGGAT-- 754
Query 765 TTCATGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTA-TT--TCAAC- 820
||| ||||| |||||||||||||| |||||||||||||||||||||| || || |
Sbjct 755 GTCA--TGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGTTTTACTTAAGCACCG 812
Query 821 AC--CA-AATGTATT-ATA--AATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGA- 872
| || | | ||| ||| |||||| || |||| |||||||||||| |||| ||||
Sbjct 813 GCTGCACCACG-ATTCATACGAATATG-AGTTTGAGATATGGATTACGACTAAGATTGAC 870
Query 873 GACCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATAAATACGGGGCC-AAT-TATA-CA 929
| ||||||||||||||||||||||||||||||||| ||| | | || || || | |
Sbjct 871 G-TCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATATGAGACCTAAGATAAAGCT 929
Query 930 -C-ACA-AGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTTT--A--ATGAC- 981
| || ||||||| | ||||||| || |||||||| ||| |||||| | |||
Sbjct 930 TCCACTTAGTTTCTACGTTGACGAAGAGAAGAAAGTTTTCAT-GGGTTTTGATCATGGGG 988
Query 982 AAT--CGCAAACAATT----AACATCATTGGAGAGGCTGGATACTTTAGAGAATTGGATC 1035
||| | ||| ||| ||||||||||||||| |||||| ||| ||| |||||||||
Sbjct 989 AATATCCCAAGTTATTTCTTAACATCATTGGAGAGACTGGATTCTTAAGAAAATTGGATC 1048
Query 1036 TTGGAGAACATGCAGAGCCA 1055
| |||| ||||| || ||||
Sbjct 1049 TCGGAGTACATGAAG-GCCA 1067
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 206 bits (111), Expect = 5e-52
Identities = 287/366 (78%), Gaps = 36/366 (10%)
Strand=Plus/Plus
Query 700 TGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAGG 759
||||||||||||||||| ||||||||||| || ||| ||||| |||| ||||| | | ||
Sbjct 178 TGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGGT-GG 236
Query 760 G-ATCATTCA-TGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTTC 817
| || ||| | ||| ||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct 237 GCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTACTTC 295
Query 818 AACACCAAATGTATTATAA---ATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGAG 873
| ||| | || || | || |||||| | |||| ||| ||||||| ||| |||||
Sbjct 296 AGCACGA--TGAATCA-AATCCATATGA-GCTTGACTTATCGATTACGACCAAGATTGAG 351
Query 874 ACCGAA-ATGGTGTCGTGGAGCAAGTTCTTGAGAAT--AAATA-C-GG----G---G--- 918
|| | | | ||||| ||||||||||||||||||| | ||| | | || | |
Sbjct 352 ACTGGAGA-GGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGATAGTTA 410
Query 919 ----CCAATTATACACACAAGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTT 974
|| |||||| | ||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 411 TGTTCCTATTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTT 470
Query 975 T-AA--TGACAATCGCAA-ACAATTAACATCATTGGAGAGGCTGGATACTTTAGAGAATT 1030
| || || |||||| | |||||||||||||||||||||||||||||||| || | |||
Sbjct 471 TGAAGATGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTGAGGGCATT 530
Query 1031 GGATCT 1036
||||||
Sbjct 531 GGATCT 536
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 198 bits (107), Expect = 9e-50
Identities = 283/363 (78%), Gaps = 32/363 (9%)
Strand=Plus/Plus
Query 535 CAAtttttttGGTATGAAATCTATGATTTTAACTCTGATTTATGGACAACTCTTGATGTC 594
||||| |||||||||| |||||| |||||| |||||||||||||||| ||||||||||||
Sbjct 385 CAATTCTTTTGGTATGGAATCTACGATTTTGACTCTGATTTATGGACTACTCTTGATGTC 444
Query 595 ACTCCATACTGGTTTATAGC-TATTTCTCAA-AGTGGTGTTTCCCTCATGGGAAACACAT 652
||||| | ||| |||||| | ||| | || |||| ||||| || | ||||| ||| |
Sbjct 445 ACTCCGCATTGGCGTATAGCGT-TTTGT-AACCGTGGCGTTTCTCTTAAGGGAAGCACGT 502
Query 653 ACTGGTGTGCT--AG-GA-TAA-G--GA-G-CG--GCGGT-TATAG-CGATCACATT-AT 698
||||||||||| || | || | || | || | || | | | ||||| | || ||
Sbjct 503 ACTGGTGTGCTGCAGAAAGGAACGTAGATGTCGATGAAGTCT-TGGCCGATCGC-TTAAT 560
Query 699 TTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAG 758
||||||||||||||||| ||||||||||| |||||| ||||| |||| ||||| | | |
Sbjct 561 CTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGGT-G 619
Query 759 GG-ATCATTCA-TGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTT 816
|| || ||| | ||| ||| ||||||||||||||||||||||||||||| |||||| ||
Sbjct 620 GGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTACTT 678
Query 817 CAACACCAAATGTATTATAA---ATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGA 872
|| ||| | || || | || |||||| | |||| ||||||||||| ||| ||||
Sbjct 679 CAGCACGA--TGAATCA-AATCCATATGA-GCTTGACTTATGGATTACGACCAAGATTGA 734
Query 873 GAC 875
|||
Sbjct 735 GAC 737
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 189 bits (102), Expect = 5e-47
Identities = 287/370 (78%), Gaps = 37/370 (10%)
Strand=Plus/Plus
Query 1 ATGACGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAAGAGATTTTGTCAAGGGTT 60
||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct 1 ATGGCGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAGGAGATTTTTTCTAGGGTT 60
Query 61 CCCTTGAAATCTATGAGAGCAGTGCGATTAACTTGCAAAAATTGGAACACTTTATCCAGA 120
||||||| |||||||| ||||||| ||||||||||||||| |||||||| |||||| | |
Sbjct 61 CCCTTGACATCTATGAAAGCAGTGAGATTAACTTGCAAAAGTTGGAACAATTTATCTA-A 119
Query 121 ACCATAAGTGAGAGCTTAACGAAGATGCAAATTACTAAATCAACAAGAGCAACAAGAGAA 180
| | |||||||||| |||||| |||| ||| || | || | |||||||||||
Sbjct 120 A--A---GTGAGAGCTTTACGAAGGTGCACATTGGTAGAGCA----G--CAACAAGAGAA 168
Query 181 GGGGA-ATCTACGATAATC-ATGTTGATGAATTACAAACTTTATTTAAAGAGTCTCGTTG 238
| | | | ||| |||| || |||| |||| | |||||||| |||||| |||| | | |
Sbjct 169 GAGAAGA-CTATGATAGTCGATGT-GATGCCTCACAAACTTAATTTAATGAGTAT--T-G 223
Query 239 TCGAT-GACAACGT-AGATCCATATACAGAGCCTAAAGGTAAACTTACTTGCCTTACTCT 296
|| || ||| |||| | ||||| | ||||| ||||||| | ||| || ||| | |
Sbjct 224 TC-ATCGACGACGTTAC-TCCATCTGCAGAGTTTAAAGGTCAGTTTAGTTTACTT-CACA 280
Query 297 TGAGC-ACCAAGTCA-AGATATCTCAAGTCTTTCTA-TGTGAGGGTTTATTGTTATGCAT 353
|| | ||| || | | | ||| ||||||| | | | ||||||||| |||||||||||
Sbjct 281 AGAACTACC--GT-ATA-A-ATC--AAGTCTTAC-ACTATGAGGGTTTGTTGTTATGCAT 332
Query 354 CT-TGAAAGA 362
| |||||||
Sbjct 333 -TATGAAAGA 341
> AT3G04250.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:1121950-1122828 FORWARD LENGTH=879
Length=879
Score = 187 bits (101), Expect = 2e-46
Identities = 407/545 (75%), Gaps = 60/545 (11%)
Strand=Plus/Plus
Query 544 TGGTATGAAATCTATGAT-TT-TAACTCTGATTTATGGACAACTCTTGATGTCACTCCAT 601
|||||||||||||| ||| || ||| | |||||||||||||||||||||||| ||||||
Sbjct 124 TGGTATGAAATCTACGATATTGAAAC-C-GATTTATGGACAACTCTTGATGTCCCTCCAT 181
Query 602 ACTGGTTTA-TAGCTAT-TTCTCAAAGTGGTGTTTCCCTCATGGGAAACACATACTGGTG 659
| ||| || || | | || ||| |||||||||| |||| |||||| || |||| ||
Sbjct 182 ATTGG-ATAGTATC-GTGTTATCAGCGTGGTGTTTCTCTCAAGGGAAATACCTACTTTTG 239
Query 660 TGCTAGGATAAGGAGCGGCGGT------TATAG-CGATCACATTATTTGTTTTGATTTTA 712
||||| | ||| | | || | || | ||||||||| || ||||||||||| |
Sbjct 240 TGCTACAAAAAGTAAC-GCAATAAACAAAATCGACGATCACATAATCTGTTTTGATTTCA 298
Query 713 CAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAGG-GATCATTCA-TG 770
|||| ||||||||||| || ||||||| | | || ||||||| | || || | | | |
Sbjct 299 CAAGTGAGAGATTTGGGCCACTTTTGCGTCTACCGTTTAGCGCT-GGCCATGA-TGACTA 356
Query 771 TGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTT-CA-ACACCAAATG 828
||||| |||||||||||||||||||||||||||||| | |||| || | ||| | | ||
Sbjct 357 TGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTACTTACGCACAACGACTG 416
Query 829 TATTATAAATATGAAGTT-GAAATATGGATTACGGTTAAGCTTGAG-ACCGA-AATGGTG 885
| || |||||| ||| || |||||||| ||| |||| | ||| | || || | ||
Sbjct 417 GA--ATCCATATGA-GTTTGAGATATGGATCACGACTAAGATCGAGTAT-GATAAAG-TG 471
Query 886 TCGTGGAGCAAGTTCTTGAGAA-TAAATAC-GG------GGC---CA-----ATT--ATA 927
|||||||||||| ||||| ||| | |||| || ||| || ||| |||
Sbjct 472 TCGTGGAGCAAGATCTTG-GAAATGGATACAGGACCATTGGCTGACATGCCGATTGCATA 530
Query 928 CACACA----AGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTTTAATGA-CA 982
| ||| |||||||||||||||||||| ||||||||| |||| || ||| ||| ||
Sbjct 531 TATACATGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCTCCAT-GGTTTT--TGATCA 587
Query 983 ATCGCAAACAATTAACATCATTGGAGAGGCTGGATACTTTAGAGAATTGGATCTTGGAGA 1042
| || | | | |||||||||||| | ||||||| ||||||||||||||||| |||
Sbjct 588 --C-CACAGAGTCAACATCATTGGAAAAACTGGATATTTTAGAGAATTGGATCTCCGAGT 644
Query 1043 ACATG 1047
|||||
Sbjct 645 ACATG 649
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 176 bits (95), Expect = 4e-43
Identities = 288/376 (77%), Gaps = 33/376 (9%)
Strand=Plus/Plus
Query 3 GACGACGATGATCTCCAATCTTCCAAGGGATTTGATAGAAGAGATTTTGTCAAGGGTTCC 62
|||||||| ||| || |||||||||| ||||||| |||| || ||| | || || ||| |
Sbjct 465 GACGACGACGATGTCAAATCTTCCAACGGATTTGTTAGAGGAAATTATCTCTAGAGTT-C 523
Query 63 CT-TGAAATCTATGAGAGCAGTGCGATTAACTTGCAAAAATTGGAACACTTTATCCAGAA 121
|| ||||| ||||||||||||||||||||||||||||| ||| | || ||| |
Sbjct 524 CTCGGAAATATATGAGAGCAGTGCGATTAACTTGCAAAAGGTGG-A-ACGGTAT---G-T 577
Query 122 CCATAAGTGAGAGCTTAACGAAGATGCAAATT-ACTAAATCAACAAG-AGCAACAAGAG- 178
|| ||| ||||||| ||||||||||| ||| | ||| || ||| ||||||||| |
Sbjct 578 TCAAAAGCCAGAGCTTTACGAAGATGCACATTGGC-AAA-GAAGAAGCAGCAACAAGGGA 635
Query 179 A--AGGGGA-ATCTAC-GATAATCA-TGTTGATGAATTACAAACTTTATTTAAAGAGTCT 233
| | || | | || | ||| || | || ||||| ||||||| ||||||||| | |
Sbjct 636 ACTAAGGCAGA-CT-CGGATGAT-AGTGATGATGGATTACAATGTTTATTTAATG-G--G 689
Query 234 CGTTGTCGATGACAACGTAGA-TCCATATACAGAGCCTAAAGGTAAACTTACTTGCCT-T 291
| ||| | | | ||| | | | ||||| | |||| || ||||||||||||||||||
Sbjct 690 CATTG-C-A-GTCAATG-AAATTCCATCCATAGAGACTCTAGGTAAACTTACTTGCCTAG 745
Query 292 ACTCTTGAGCACCAAGTCAAGATATCTCAAGTC-TTTCTATGTGAGGGTTTATTGTTATG 350
|| || || | || |||||||||||||||||| ||| | ||||||||||||||||||||
Sbjct 746 ACGATTCAG-AACAGGTCAAGATATCTCAAGTCTTTTGT-TGTGAGGGTTTATTGTTATG 803
Query 351 CATCTTGAAAGACGAT 366
|||||||||||| |||
Sbjct 804 CATCTTGAAAGATGAT 819
Score = 161 bits (87), Expect = 1e-38
Identities = 171/211 (81%), Gaps = 8/211 (4%)
Strand=Plus/Plus
Query 546 GTATGAAATCTATGATTTTAACTCTGATTTATGGACAACTCTTGATGTCACTCCATACTG 605
||||||||||||||||||| | |||||| ||||||| ||||||||||| ||||| ||||
Sbjct 1017 GTATGAAATCTATGATTTTGATTCTGATGTATGGACTACTCTTGATGTGTCTCCACACTG 1076
Query 606 GTTTATAGCTATTTCTCAAAGTGGTGTTTCCCTCATGGGAAACACATACTGGTGTGCT-A 664
||||||| || ||| || |||| |||| |||| ||||||||| |||||| | ||| |
Sbjct 1077 GTTTATA---ATGTCTGAACGTGGCCTTTCTCTCAAGGGAAACACTTACTGGGGCGCTAA 1133
Query 665 GGATAAGG-A-GC-GGCGGTTATAGCGATCACATTATTTGTTTTGATTTTACAAGAGAGA 721
|| | || | || ||| | | ||||| || || ||||||||||||||||||||||
Sbjct 1134 AGA-ACGGCACGCATACGGATCCATTGATCATATAATCTGTTTTGATTTTACAAGAGAGA 1192
Query 722 GATTTGGACCGCTTTTGCCTTTGCCATTTAG 752
|||||||||||||| | ||| ||||||||||
Sbjct 1193 GATTTGGACCGCTTCTACCTCTGCCATTTAG 1223
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 119 bits (64), Expect = 7e-26
Identities = 406/558 (73%), Gaps = 75/558 (13%)
Strand=Plus/Plus
Query 540 tttttGGTATGAAATCTATGATTTTAACTCTGATTTATGGACAACTCTTGATGTCACTCC 599
|||||||||||||||||| |||||| |||||||||| ||||| |||||||| || |||||
Sbjct 531 TTTTTGGTATGAAATCTACGATTTTGACTCTGATTTGTGGACGACTCTTGACGTTACTCC 590
Query 600 ATACTGGTTTAT--A----GCT----AT--TTCTCA-AA--GTGGTGTTTCCCTCATGGG 644
| | |||||||| | || | || | | || |||||||| | |||| |||
Sbjct 591 ACAATGGTTTATAAATTTCCCTCCCCGTGGTTGTTATAACCGTGGTGTTACTCTCAAGGG 650
Query 645 AAACACATACTGGTGTGCTAGGATAAGG-AG-C---GGC-----GG-TT-AT-AGC--GA 689
|||||| ||||||||||||| | |||| || | | || || | | | ||
Sbjct 651 AAACACTTACTGGTGTGCTATAAGAAGGAAGTCAAACACTAATTGGTTTGTTGATCTTGA 710
Query 690 TCACATTATTTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATT 749
|||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||
Sbjct 711 TCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCCGTT 770
Query 750 TAGCGTTAGGGAT-CATTC--ATG---TGTGATTTTATCTTGTGTTAGAGAAGAGAAGCT 803
| ||||| || | | | | | ||||| | |||||||||||||||||||||||||
Sbjct 771 T---GTTAGATATACGTCCGGAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCT 827
Query 804 TGCAGTTTTATTTCA-ACACCAAATG-TATTATAAATATGAAGTTGAAATATGGATTACG 861
||| ||||| ||| | || || || || | | | || | | |||||||||||
Sbjct 828 TGCGGTTTTGTTTTGTA-AC-AA-TGCTACTGT---T--GA-G--G---TATGGATTACG 873
Query 862 GTTAAGCTTGAGACCGA-AATGGTGTCGTGGAGCAAGTTCTTGAGAATAAATACGG--G- 917
|||| ||||||| || || | | ||||||||||||||||||| | | |||| | |
Sbjct 874 ACTAAGATTGAGACTGACAA-GATTTCGTGGAGCAAGTTCTTGACAGTGAATATGTATGT 932
Query 918 -G-CCAATTATACACACA-AGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTT 974
| || || | | | ||||| ||||||||||||| ||||||||| || || | ||
Sbjct 933 TGACC--TTCTGGA-AGGGAGTTTTTTCATTGACGAGGTAAAGAAAGTTGCTAT-GATTT 988
Query 975 T--A-AT---GAC-AATCGCAA-ACAATTAACATCATTGGAGAGGCTGGATACTTTAGAG 1026
| | || || |||||| | ||| || ||||| | |||||||||||| || ||| ||
Sbjct 989 TTGATATACCGATGAATCGCGAGACAGTTTACATCGTGGGAGAGGCTGGAAACGTTAAAG 1048
Query 1027 AATTGGATCTTGGAGAAC 1044
|| || |||| ||| |||
Sbjct 1049 AACTGCATCTAGGACAAC 1066
> AT2G04730.1 | Symbols: | pseudogene, F-box protein-related,
contains TIGRFAM TIGR01640 : F-box protein interaction domain;
similar to F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana) | chr2:1654500-1655699 REVERSE LENGTH=1200
Length=1200
Score = 108 bits (58), Expect = 2e-22
Identities = 173/226 (77%), Gaps = 18/226 (8%)
Strand=Plus/Plus
Query 688 GATCACATTATTTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCA 747
|| ||||| || ||||||||||||||||| |||||||||||||||||| ||||| | ||
Sbjct 698 GACCACATAATCTGTTTTGATTTTACAAGCGAGAGATTTGGACCGCTTCTGCCTCTACCG 757
Query 748 TTTAGCGTT-AGGGATCATT-C-ATGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTT 804
|| | || | || || || | ||||| |||||||||| ||||| |||||||||||||
Sbjct 758 TTAAACGCTGAGT-ATTATGGCGATGTG--ATTTTATCTTCTGTTAAAGAAGAGAAGCTT 814
Query 805 GCAGTTTTATTTCAACACCAAAT--GTATTA-TAAATATGAAGTT-GAAATATGGATTAC 860
|| |||||| ||||| |||| || | | |||| | ||| || |||||||||||
Sbjct 815 GCGGTTTTA---CAACAGCAAAACCGTGCGAATCCATAT-ATGTTTGATATATGGATTAC 870
Query 861 GGTTAAGCTTGAGACC-GAA-ATGGTGTCGTGGAGCAAGTTCTTGA 904
|||| ||||| || | ||| ||| |||| |||||||||||
Sbjct 871 AATTAATATTGAG-CCTGGCCATG-TGTTATGGACCAAGTTCTTGA 914
> AT3G22870.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8096230-8097471 FORWARD LENGTH=1242
Length=1242
Score = 87.9 bits (47), Expect = 2e-16
Identities = 97/119 (82%), Gaps = 12/119 (10%)
Strand=Plus/Plus
Query 252 AGATCCATATACAGAGCCTAAAGGTAAACTTACTTGCCTTACTCTTGAGC-ACCAAGTCA 310
|||||||| ||||||| |||||| ||||||||||| || |||| | | ||||| |
Sbjct 213 AGATCCATCTACAGAGATTAAAGGCAAACTTACTTG-----CT-TTGA-CGAACAAGTAA 265
Query 311 AGATATCTCAAG-TCTTTCTA-TGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATA 367
|| ||||| | | | |||| | || ||||||||||||||||||||||||||||||||||
Sbjct 266 AGGTATCT-ATGTTGTTTC-ATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATA 322
> AT3G20705.1 | Symbols: | pseudogene, hypothetical protein |
chr3:7235948-7237084 REVERSE LENGTH=1137
Length=1137
Score = 76.8 bits (41), Expect = 4e-13
Identities = 156/208 (75%), Gaps = 21/208 (10%)
Strand=Plus/Plus
Query 698 TTTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTA-GCGTT 756
||| |||||||||||||||||||||||||||||||| | |||||||||| || | | ||
Sbjct 665 TTTATTTTGATTTTACAAGAGAGAGATTTGGACCGCGTCTGCCTTTGCCCTTCATGAATT 724
Query 757 AGGGATCATTCATGTGTGATTTTATCTTGTGTT-AGAGAAGAGAAGCTTGCAGTT-TTAT 814
|| || || |||| | | |||| ||| | | ||||||||||||||| | | ||||
Sbjct 725 TGG-ATGAT----GTGTC-TCT-ATCT-GTGGTCAAAGAAGAGAAGCTTGC-GATGTTAT 775
Query 815 TTCAACACCAAATGTATTATAAATATGAAGTTGAAATATGGATTACGGTTAAGCTTGAGA 874
| || | | || ||| || ||| || || || ||| | |||| ||| |||||
Sbjct 776 T--AA-AGCGG-TGGG--ATACATGTGAGGTGGAGATTTGGGTGACGGACAAGATTGAGC 829
Query 875 CCGAAATGGTGTCGTGGAGCAAGTTCTT 902
|||| || |||||||||||||||||||
Sbjct 830 CCGA--TG-TGTCGTGGAGCAAGTTCTT 854
> AT3G20710.1 | Symbols: | F-box family protein | chr3:7237911-7238999
REVERSE LENGTH=1089
Length=1089
Score = 69.4 bits (37), Expect = 7e-11
Identities = 52/59 (88%), Gaps = 1/59 (2%)
Strand=Plus/Plus
Query 695 TTATT-TGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAG 752
||||| |||||||||||||||||||||||||||||| | | | ||||| |||| |||||
Sbjct 652 TTATTATGTTTTGATTTTACAAGAGAGAGATTTGGAACACCTCTGCCTCTGCCCTTTAG 710
Score = 58.4 bits (31), Expect = 2e-07
Identities = 38/41 (93%), Gaps = 2/41 (5%)
Strand=Plus/Plus
Query 936 TTTCTTCATTGACGAGGAAAAGAAAGTCGCCA-TTGGGTTT 975
|||||||||||||||||||||||||||||| | ||| ||||
Sbjct 897 TTTCTTCATTGACGAGGAAAAGAAAGTCGC-AGTTGTGTTT 936
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57278821845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5