BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314348
Length=2103
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49270.1 | Symbols: | Protein kinase superfamily protein | ... 3243 0.0
AT3G18810.1 | Symbols: | Protein kinase superfamily protein | ... 850 0.0
AT1G23540.1 | Symbols: IGI1, AtPERK12 | Protein kinase superfam... 211 2e-53
> AT1G49270.1 | Symbols: | Protein kinase superfamily protein
| chr1:18227334-18230227 REVERSE LENGTH=2100
Length=2100
Score = 3243 bits (1756), Expect = 0.0
Identities = 1996/2111 (95%), Gaps = 19/2111 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAGGGGCAATCCCCGGAGAACTCACCGCCGGctcctcctcctccttctcctccg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1 ATGGCGGAGGGGCAATCCCCGGAGAACTCACCGCCAGCTCCTCCTCCTCCTTCTCCTCCG 60
Query 61 tcacctccctcttccaacgatcaacaaacaacatctcctcctccttccGAAAATCAAGAA 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 TCACCTCCCTCTTCCAACGATCAACAAACAACATCTCCTCCTCCTTCCGACAATCAAGAA 120
Query 121 ACAACATCTCCTCCTCCTCCATCTTCCCCTGACCTAGCTCCTCCACCTCAACAACAACAA 180
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 121 ACAACATCTCCTCCTCCTCCATCTTCACCTGACATAGCTCCTCCACCTCAACAACAACAA 180
Query 181 GAATCACCACCTCCTCCTTCGCCGGATAATTCCTTCGATGGTTCTTCCTTGTCGCCTCCA 240
||||||||||||||||||| |||||| ||||||| |||||||||||||| |||| |||||
Sbjct 181 GAATCACCACCTCCTCCTTTGCCGGAAAATTCCTCCGATGGTTCTTCCTCGTCGTCTCCA 240
Query 241 CCACCACTGTCTGActcatcctcctcctcacaatcacaatctccacctcctccttcaccc 300
||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 241 CCACCACCGTCTGACTCA------TCCTCACAATCACAATCTCCACCTCCTCCTTCAACG 294
Query 301 tccccgcctcaGCACAGTGacaacaatggcaacaaaggaaacaacaacgaaaacaacaat 360
|||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 295 TCCCCGCCACAGCAGAGTGACAACAATGGCAACAAAGGAAACAACAATGAGAACAACAAA 354
Query 361 ggaaatgatggaagcaacGGTGATGGAGGAAACAAGAACACT-TCTCATACTCCTCCACC 419
|| ||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||
Sbjct 355 GGTAATGATGGAAGCAGCGGCGATGGAGGAAACAAGAACA-TGTCTCATACTCCTCCACC 413
Query 420 AGCGTCTAAGACTTCGGACCATAGCTCTCAGTCGCCACCAAAATCGCTGGCGCCACCTAC 479
| | |||||||||||||||||||||||||| |||| ||||| |||||||||||| |||||
Sbjct 414 ACCTTCTAAGACTTCGGACCATAGCTCTCACTCGCAACCAAGATCGCTGGCGCCGCCTAC 473
Query 480 AAGCAACGGTGGCTCGAATTCGTCAAGTAATGATGGTCTGAACATCGGTGCTGTTATAGG 539
||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 474 AAGCAACAGTGGCTCAAATTCGTCAAGTAATGATGGTTTGAACATTGGTGCTGTTATAGG 533
Query 540 ACTTGTGGCGGCAGCTGGGCTTTTGTTCATCGTCATGATCTTGTTATGTGTCTGTTGTTT 599
||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||||||
Sbjct 534 ACTTGTGGCTGCAGCTGGAATTTTATTCATTGTCATGATCTTGTTATGTGTCTGTTGTTT 593
Query 600 TCGGAAGAAGAAGAAGAAATCAAAGCTTGACCAGATGCCGTACTACGGAAGCAATGCTTA 659
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 594 TCGGAAGAAGAAGAAGAAATCAAAGCTTGATCAGATGCCGTACTACGGAAGCAATGCTTA 653
Query 660 CGCCGCAGGCAAAACTGGGGGTGATCAATACTACAACCAAAAAGTTGC-A-AC-ACAACA 716
| ||||||| |||||||||||||||||||||||||||||||| | ||| | || ||||||
Sbjct 654 CCCCGCAGGAAAAACTGGGGGTGATCAATACTACAACCAAAATGCTGCTACACAACAACA 713
Query 717 AC-AC--TACAACCAAAATGATCACATTGTGAATCTGCCTCCACCTCCTGGATCAATGGG 773
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 ACAACATTACAACCAAAATGATCACATTGTGAATCTGCCTCCACCTCCTGGATCAATGGG 773
Query 774 AACAAACTGTGTAAATTCACCGCCTCAACCACCACCTGCAGGAAATTGGCAGCCAATGCC 833
||||||||| || | ||||||| | | |||||||||| ||||||||||||||||||||||
Sbjct 774 AACAAACTGGGTGAGTTCACCG-C-C-ACCACCACCTCCAGGAAATTGGCAGCCAATGCC 830
Query 834 CTCGCCACCAGCACCAGTGTCTGGAGGCGCAAATGTGATCCATAGCGGCGAAATGAGCTC 893
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 831 GTCGCCACCAGCACCAGTGTCAGGAGGCGCAAATGTGATCCAAAGCGGCGAAATGAGCTC 890
Query 894 AAATTTCTCATCAGGTCCATACGCTCCATCTCTACCACCGCCTCACCCTTCAGTGGCTAT 953
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 891 AAATTTCTCATCAGGTCCATACGCTCCATCTCTACCACCACCTCACCCTTCAGTGGCTCT 950
Query 954 GGGATTTAACAACAGCACATTCACTTACGAGGAGCTTGCAGCCGCAACTCAAGGTTTCTC 1013
|||||| ||||| |||||||||||||| |||||||| ||| |||||||||||||||||||
Sbjct 951 GGGATTCAACAATAGCACATTCACTTATGAGGAGCTAGCATCCGCAACTCAAGGTTTCTC 1010
Query 1014 AAAAGATCGCTTGTTGGGACAAGGCGGGTTT-GGATATGTTCACAAAGGAATATTGCCAA 1072
|||||| || ||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1011 AAAAGACCGGTTGTTGGGACAAGGC-GGTTTCGGATATGTTCACAAAGGAATCTTGCCAA 1069
Query 1073 ACGGTAAGGAGATCGCGGTGAAGAGCCTAAAAGCCGGAAGCGGGCAAGGTGAGAGAGAGT 1132
| ||||||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||
Sbjct 1070 ATGGTAAGGAGATAGCGGTGAAGAGCCTTAAAGCGGGTAGCGGGCAAGGCGAGAGAGAGT 1129
Query 1133 TCCAGGCAGAGGTTGAGATCATCAGCCGCGTTCATCATAGACATCTTGTGTCTCTTGTCG 1192
||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |
Sbjct 1130 TCCAGGCAGAGGTGGAGATCATCAGCCGCGTTCATCATCGACATCTCGTGTCTCTTGTGG 1189
Query 1193 GATACTGCAGTAATGAGGGAGGACAGAGGTTGTTGGTCTATGAGTTTCTCCCTAATGACA 1252
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 GATACTGCAGTAATGCGGGAGGACAGAGGTTGTTGGTCTATGAGTTTCTCCCTAATGACA 1249
Query 1253 CACTTGAGTTCCACCTTCATGGGAAAAGTGGGACTGTGATGGATTGGCCAACGAGAATCA 1312
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1250 CACTTGAGTTCCACCTTCATGGGAAAAGTGGGACTGTGATGGATTGGCCAACCAGACTCA 1309
Query 1313 AGATTGCCTTAGGATCAGCAAAAGGTCTTGCTTATCTACATGAAGATTGTCATCCAAAAA 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 AGATTGCCTTAGGATCAGCAAAAGGTCTTGCTTATCTACATGAAGATTGTCATCCAAAAA 1369
Query 1373 TCATCCATAGAGACATTAAAGCTTCAAACATTCTCCTTGACCATAACTTCGAAGCCAAGG 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370 TCATCCATAGAGACATTAAAGCTTCAAACATTCTCCTTGACCATAACTTCGAAGCCAAGG 1429
Query 1433 TTGCAGATTTTGGTTTGGCCAAACTCTCTCAAGACAACTATACACATGTATCGACTCGTG 1492
|||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct 1430 TTGCAGATTTTGGTTTGGCCAAGCTCTCCCAAGACAACAATACACATGTATCGACTCGTG 1489
Query 1493 TTATGGGAACATTCGGATACTTAGCTCCTGAATATGCATCAAGCGGGAAACTAACAGAGA 1552
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct 1490 TTATGGGAACATTCGGATACTTAGCTCCTGAATATGCATCGAGTGGGAAACTAACTGAGA 1549
Query 1553 AATCAGATGTTTTCTCTTTTGGAGTTATGCTTCTTGAGCTCATAACCGGACGCAGACCGG 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1550 AATCAGATGTTTTCTCTTTTGGAGTTATGCTTCTTGAGCTCATAACCGGACGCGGACCGG 1609
Query 1613 TTGATCTTAGTGGCGACATGGAAGACAGTTTAGTTGATTGGGCGAGACCATTATGCATGA 1672
||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1610 TTGATCTAAGTGGTGACATGGAAGACAGTTTAGTCGATTGGGCGAGACCATTGTGCATGA 1669
Query 1673 GCGCAGCTCAAGATGGAGAATATGGGGAATTGGTGGACCCATTCCTTGAGAACCAATACG 1732
| | ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1670 GGGTAGCGCAAGATGGAGAATATGGGGAATTGGTTGACCCATTCCTTGAGCACCAATACG 1729
Query 1733 AGCCTTATGAGATGGCACGCATGGTGGCTTGTGCTGCTGCAGCCGTAAGACATTCTGGTC 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1730 AGCCTTATGAGATGGCACGCATGGTGGCTTGTGCTGCTGCAGCCGTAAGACATTCTGGTC 1789
Query 1793 GTCGCCGCCCAAAGATGAGTCAGATTGTTAGGACGTTGGAGGGTGATGCCTCGCTGGATG 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1790 GTCGCCGCCCAAAGATGAGTCAGATTGTTAGGACGTTGGAGGGTGATGCCTCGCTGGATG 1849
Query 1853 ACTTAGACGATAGTGTAAAACCGAGACAGAGTTCAAGCGGAGGTGAAGGCAGCTCAGACT 1912
||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1850 ACTTAGACGATGGTGTGAAACCGAAACAGAGTTCAAGCGGAGGTGAAGGCAGCTCAGACT 1909
Query 1913 ATGAGATGGGCACATATGGTGCCGAGATGAGGAAGTTTCGGAAAGTGACATTGGACAGTC 1972
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1910 ATGAGATGGGCACATATGGTGCTGAGATGAGGAAGTTTCGGAAAGTGACATTGGAAAGTC 1969
Query 1973 GGGATTACGGGGCAAGTAGCGAATACGGCGCCACAAGCGAGTATGGGCTTGACCCGTCCT 2032
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct 1970 GGGATTACGGGGCAAGTAGCGAATACGGTGCCACAAGCGAGTACGGGCTTGACCCATCCT 2029
Query 2033 CTTCAAGCAGCGAGGAGATGCACATTGGAGGAAGCACCCGCAAAACTACTACCACTAACC 2092
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 2030 CTTCAAGCAGCGAGGAGATGCACATTGGAGGAAGCACCAGCAAAACTACTACTACTAACC 2089
Query 2093 GTGGGATTTAA 2103
|||||||||||
Sbjct 2090 GTGGGATTTAA 2100
> AT3G18810.1 | Symbols: | Protein kinase superfamily protein
| chr3:6480701-6483593 REVERSE LENGTH=2103
Length=2103
Score = 850 bits (460), Expect = 0.0
Identities = 1084/1379 (79%), Gaps = 67/1379 (5%)
Strand=Plus/Plus
Query 707 CAACA-CAACAACACTACAACCAAAATGATCACATTGTGAATCTGCCTC--CA-CCTCCT 762
||||| || ||| || | ||||| | |||||| | |||||||| ||| || ||||
Sbjct 706 CAACAGCAGCAATACAATAACCAGAGCGATCACGTAATGAATCTGTCTCAGCAGTATCCT 765
Query 763 GGAT-CAATGGGAA-CA-AACTGTG-TAAATTCACCGCCTCAACCACCACCTGCAGGAAA 818
|||| ||| ||||| | ||||| | | ||||||||||||| ||||||| | ||||||
Sbjct 766 GGATCCAACGGGAATAATAACTG-GATGAATTCACCGCCTCCACCACCA-C--CAGGAAG 821
Query 819 TTGGCAGCCAAT-G-C-CCT-CGCCACCAGCACCAGTGTCTGGAGGCGCAAATGTGATCC 874
||||| || || | | ||| | |||||| | ||||| || || || |||| ||
Sbjct 822 CTGGCAACC-ATCGCCGCCTCCACCACCACCGCCAGTCTCAGGCGGTATGAATG-GA--A 877
Query 875 ATAGCGGCGAAATGAGCTCAAATTTCTCA-TCAGGTCCATACGCTCCATCTCTACCACCG 933
| || |||| | |||||||| || | ||||| ||| | | ||| || |||||||
Sbjct 878 ACAGTAGCGACTTTAGCTCAAA---CT-ACTCAGGACCACATGGTCCGTCGGTACCACCA 933
Query 934 CCTCACCCTTCAGTGGCTATGGGATTT-AACAACAGCACATTCACTTACGAGGAGCTTGC 992
|||||||||||||||||| | || ||| ||||| ||||||||||| ||||| ||||| ||
Sbjct 934 CCTCACCCTTCAGTGGCTCTAGG-TTTCAACAAGAGCACATTCACCTACGACGAGCTAGC 992
Query 993 AGCCGCAACTCAAGGTTTCT-CAAAAGATCGCTTGTTGGGACAAGGCGGGTTTGGATATG 1051
|| ||||||||||| |||| | || | | ||||| || ||||||||||| |||||||
Sbjct 993 CGCTGCAACTCAAGGCTTCTCCCAATCA-AGATTGTTAGGTCAAGGCGGGTTCGGATATG 1051
Query 1052 TTCACAAAGGAATA-TTGCCAAACGGTAAGGAGATCGCGGTGAAGAGCCTAAAAGCCGGA 1110
||||||| |||||| || || || || || ||||| ||||||||||| || ||||| |||
Sbjct 1052 TTCACAAGGGAATACTT-CCCAATGGGAAAGAGATTGCGGTGAAGAGTCTGAAAGCGGGA 1110
Query 1111 AGCGGGCAAGGTGAGAGAGAGTTCCAGGCAGAGGTTGAGATCATCAGCCGCGTTCATCAT 1170
||||||||||| ||| | ||||| ||||| |||||||| ||||| ||||| |||||||||
Sbjct 1111 AGCGGGCAAGGAGAGCGCGAGTTTCAGGCTGAGGTTGACATCATTAGCCGAGTTCATCAT 1170
Query 1171 AGACATCTTGTGTCTCTTGTCGGATACTGCAGTAATG-AGGGAGGACAGAGGTTGTTGGT 1229
| ||||||||||||||| ||||| | ||| || | |||||||||||| |||||||
Sbjct 1171 CGGTTTCTTGTGTCTCTTGTTGGATA-T--TGTATTGCA-GGAGGACAGAGGATGTTGGT 1226
Query 1230 CTATGAGTTTC-TCCCTAATGACACACTTGAGTTCCACCTTCATGGGAAAAGTGGGACTG 1288
|||||| ||| | ||||||||||||||||||||||| || ||||| |||||||| | |
Sbjct 1227 TTATGAG-TTCTTACCTAATGACACACTTGAGTTCCATCTCCATGGTAAAAGTGGCAAGG 1285
Query 1289 TGATGGATTGGCCAACGAGAATCAAGATTGCCTTAGGATCAGCAAAAGGTCTTGCTTATC 1348
| | || ||||| || ||| |||||||||| || |||||||| ||||| |||||||| |
Sbjct 1286 TTCTTGACTGGCCTACAAGACTCAAGATTGCTTTGGGATCAGCTAAAGGACTTGCTTA-C 1344
Query 1349 -TACATGAAGATTGTCATCCAAAAATCATCCATAGAGACATTAAAGCTTCAAACATTCTC 1407
|||||||||| |||||||| | |||||| |||||||||||||||||||||||||||||
Sbjct 1345 TTACATGAAGACTGTCATCCGAGAATCATTCATAGAGACATTAAAGCTTCAAACATTCTT 1404
Query 1408 CTTGACCATAAC-TTCGAAGCCAAGGTTGCAGATTTTGGTTTGGCCAAACTCTCTCAAGA 1466
||||| | | | || || || ||||||||||| || || || || || || ||||||||
Sbjct 1405 CTTGATGA-ATCCTTTGAGGCTAAGGTTGCAGACTTCGGGTTAGCGAAGCTATCTCAAGA 1463
Query 1467 CAACTAT-ACACATGTATCGACTCGTGTTATGGGAACATTCGGATACTTAGCTCCTGAAT 1525
||| | | || ||||| || |||||| | |||||||| ||||| ||||| ||||| || |
Sbjct 1464 CAA-TGTTACGCATGTCTCCACTCGTATCATGGGAACTTTCGGGTACTTGGCTCCAGAGT 1522
Query 1526 ATGCATCAAGCGGGAAACTAACAGAGAAATCAGATGTTTTCTCTTTTGGAGTTATGCTTC 1585
|||| |||||||||||||| ||||| ||||||||||||||| |||||||| |||||||
Sbjct 1523 ATGCGTCAAGCGGGAAACTGACAGACCGATCAGATGTTTTCTCCTTTGGAGTGATGCTTC 1582
Query 1586 TTGAGCTCA-TAACCGGACGCAGACCGGTTGATCTTAGTGGCGACATGGAAGACAGTTTA 1644
||||||| | | |||||||||||||| |||||||| | ||| || ||||||||||||||
Sbjct 1583 TTGAGCT-AGTTACCGGACGCAGACCTGTTGATCTCACTGGTGAAATGGAAGACAGTTTG 1641
Query 1645 GTTGATTGGGCGAGACC-ATTATGCATGAGCGCAGCTCAAGATGGAGAATATGGGGAATT 1703
|| |||||||| ||||| || |||| | | ||||||||| |||||||| || | ||| |
Sbjct 1642 GTCGATTGGGCAAGACCCAT-ATGCTTAAACGCAGCTCAGGATGGAGATTACAGTGAACT 1700
Query 1704 GGTGGACCCAT-TCCTTGAGAACCAATACGAGCCTTATGAGATGGCACGCATGGTGGCTT 1762
|| || ||| || | || ||||||||||||||| |||||||||||| ||||| ||||
Sbjct 1701 AGTTGATCCACGTC-TCGAAAACCAATACGAGCCTCATGAGATGGCACAAATGGTTGCTT 1759
Query 1763 GTGCTGCTGCAGCCGTAAGACATTCTGGTCGTCGCCGCCCAAAGATGAGTCAGATTGTTA 1822
|||| ||||||||||| || || || | | | ||| | || |||||||| |||||||||
Sbjct 1760 GTGCCGCTGCAGCCGTCAGGCACTCAGCTAGACGCAGGCCTAAGATGAGCCAGATTGTTC 1819
Query 1823 GGACGT-TGGAGGGTGATGCCTCGCTGGATGA-CTTAGACGATAGT-GTAAAACCGAGAC 1879
|| | | ||||||| ||||| |||| || || || || ||| || | ||| || |||
Sbjct 1820 GGGC-TCTGGAGGGAGATGCAACGCTAGACGATCTAAG-CGA-AGGAGGGAAAGCGGGAC 1876
Query 1880 AGAGTTCAAGCGGAGGTGAAGG---CA-GCTCAGACTATGAGATGG-GCACATATGGTGC 1934
| || ||| | || || || || |||| |||||||| | |||| || ||||
Sbjct 1877 AAAGCTCATTCCTCGG-GAGGGGTTCAAGCTCGGACTATGAC-TCAAGCACTTACAGTGC 1934
Query 1935 CGAGATGAGGAAGTTTC-GGAAAGTGACATTGGACAGTCGGGATTACGGGGCAAGTAGCG 1993
|| |||| |||||| | |||||||| ||||||| |||| || ||||| ||||| ||||
Sbjct 1935 GGATATGAAGAAGTT-CAGGAAAGTGGCATTGGATAGTCATGAGTACGGTGCAAGCAGCG 1993
Query 1994 AATACGGCGC-CACAAGCGAGTATGGGCTTGACCCGTCCTCTTCAAGCAGCGAGGAGAT 2051
| ||||| | ||| ||||| || |||||||||||||| || || ||||||||||||||
Sbjct 1994 AGTACGG-GAACACGAGCGAATACGGGCTTGACCCGTCTTCCTCGAGCAGCGAGGAGAT 2051
> AT1G23540.1 | Symbols: IGI1, AtPERK12 | Protein kinase superfamily
protein | chr1:8346827-8349786 REVERSE LENGTH=2278
Length=2278
Score = 211 bits (114), Expect = 2e-53
Identities = 495/671 (74%), Gaps = 57/671 (8%)
Strand=Plus/Plus
Query 973 TTCACTTACGAGGAGCTTGCAGCCG-CAACTCAAGG-TTT-CT--CAAAAGATCGCTTGT 1027
|||| |||||| |||||||| | | ||| ||||| ||| || ||||| | | || |
Sbjct 1075 TTCAGTTACGAAGAGCTTGCTG-AGATAACACAAGGCTTTGCTCGCAAAA-A-C-ATTCT 1130
Query 1028 TGGGACAAGGCGGGTTTGGATATGTTC-ACAAAGGAATATTGCCA-AACGGT-AAGGAGA 1084
| ||| ||||||| ||||||| || || | ||||| | |||| || | ||| ||| |
Sbjct 1131 T-GGAGAAGGCGGATTTGGATGTG-TCTATAAAGGTACATTG-CAGGATGGTAAAGTTG- 1186
Query 1085 TCGCGGTGAAG-AGCCTAAAAGCCGGAAGCGGGCAAGGTGAGAGAGAGTTCCAGGCAGAG 1143
| ||||| ||| || || ||||| ||||| || |||||||| | || ||| | ||||||
Sbjct 1187 TTGCGGTTAAGCAG-CTTAAAGCTGGAAGTGGACAAGGTGACCGTGAATTCAAAGCAGAG 1245
Query 1144 GTTGAGATCATCAGCCGCGTTCATCATAGACATCTTGTGTCTCT-TG-TCGGATACTGCA 1201
||||||||||||||||||||||||||| | ||| ||| |||||| || | || |||||||
Sbjct 1246 GTTGAGATCATCAGCCGCGTTCATCATCGCCAT-TTG-GTCTCTCTGGTTGGTTACTGCA 1303
Query 1202 GTA-ATGAGGGAGGACAGAGGTTG-TTGGTCTATGAGTTTCTCCCTAATGACACACTTG- 1258
| | || || | ||| ||| || ||||||||| | | ||||| | || ||||
Sbjct 1304 TTTCA-GACC-AGCATAGA--TTGCTTA-TCTATGAGTATGTTTCTAATCAAAC-CTTGG 1357
Query 1259 AGT-TCCACCTT-CATGGGAAAAG-TGGGACTGTGATGGATTGGCC-AACGAGAATCAAG 1314
|| || | || ||||| ||| | | | | || | || ||| | || |||| || |
Sbjct 1358 AGCATC-AT-TTGCATGG-AAAGGGTTTGCCAGTTTTAGAGTGGTCTAA-GAGAGTCCGG 1413
Query 1315 ATTGCCT-TAGGATCAGCAAAAGGTCTTG-CTTATCTACATGAAGATTGTCATCCAAAAA 1372
|| || | |||||||||| ||||| ||| | ||||| || ||||| |||||||| ||||
Sbjct 1414 ATCGC-TATAGGATCAGCCAAAGGG-TTGGCATATCTTCACGAAGACTGTCATCCGAAAA 1471
Query 1373 TCATCCATAGAGACATTAAAG-CTTCAAACATTCTCCTTGACCAT-AACT-TCGAAGC-C 1428
|||| || ||||| || |||| | |||| ||||| || || || || | | ||||| |
Sbjct 1472 TCATTCACAGAGATAT-AAAGTCAGCAAATATTCTTCTAGATGATGAA-TAT-GAAGCTC 1528
Query 1429 AAGGTTGCAGATTTTGGT-TTGGCCAAACTCTCTCAAGACAACT-ATACACATGTATCGA 1486
| |||||| |||||||| ||| | | |||| | | ||||| | || ||||| || |
Sbjct 1529 A-GGTTGCTGATTTTGGACTTG-CTAGACTCAATGAT-ACAACACAAACTCATGTTTCAA 1585
Query 1487 CTCGTGTTATGGGAACATTCGGATACTTAGCTCCTGAATATGCATCAAGCGGGAAACTAA 1546
|||| ||||||||||| ||||| ||| |||| || |||||||||||||| || ||| | |
Sbjct 1586 CTCGGGTTATGGGAACCTTCGGGTACCTAGCGCCGGAATATGCATCAAGTGGAAAATTGA 1645
Query 1547 CAGAGAAATCAGATGTTTTCTCTTTTGGAGTTATGCTTCTT-GAGCTCATAACCGGACGC 1605
| || | ||| ||||| ||||| || || ||| | || ||| ||||| |||| |||||
Sbjct 1646 CTGATAGATCCGATGTATTCTCATTCGGGGTTGTTCT-CTTAGAGCTTGTAACTGGACGG 1704
Query 1606 AGACCGGTTGA 1616
| ||| |||||
Sbjct 1705 AAACCAGTTGA 1715
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104266531965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5