BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314419
Length=3186
Score E
Sequences producing significant alignments: (Bits) Value
AT1G09620.1 | Symbols: | ATP binding;leucine-tRNA ligases;amin... 3445 0.0
AT1G50130.1 | Symbols: | pseudogene, putative leucyl tRNA synt... 2477 0.0
> AT1G09620.1 | Symbols: | ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases | chr1:3112778-3116699 REVERSE LENGTH=3720
Length=3720
Score = 3445 bits (1865), Expect = 0.0
Identities = 2476/2766 (90%), Gaps = 61/2766 (2%)
Strand=Plus/Plus
Query 461 TTGGTCTTACTGACAGTGAGATTGCAAGATTT-CAAGATCCATATGAATGGTTGTATTAC 519
||||||||||||||||||||||||||| |||| | ||| || | ||||||||||||||||
Sbjct 648 TTGGTCTTACTGACAGTGAGATTGCAA-ATTTCCGAGAGCCTTCTGAATGGTTGTATTAC 706
Query 520 TTTCCTCCTTTAGCTGTTGAAGATCTCAA-GGCTTATGGATTGGGTTGTGATTGGAGACG 578
||||| ||||| |||||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 707 TTTCCCCCTTTGGCTGTTGAAGATCT-AAGGGCATATGGATTGGGTTGTGATTGGAGACG 765
Query 579 CTCATTCGTGACTACTGATGTTAATCCCTTTTTCAATGCCTTTGTAAGGTGGCAGATGAG 638
||| || ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 766 CTCGTTTGTGACCACTGATGTTAATCCCTTTTTCGATGCCTTTGTGAGGTGGCAGATGAG 825
Query 639 GAAGTTGAAATCTATGGGAAAGATTGTCAAAGACTGTAGGTATAC-AGTATTCTCACCTT 697
||||||||||||||||||||||||||| |||||| | ||||| || | ||||||||||||
Sbjct 826 GAAGTTGAAATCTATGGGAAAGATTGTTAAAGACCGCAGGTACACTA-TATTCTCACCTT 884
Query 698 TAGATGGTCAGCCTTGTGCTGATCACGACCGTGCTACTGGTGAAGGTGTTCAGCCTCAAG 757
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 885 TAGATGGCCAGCCTTGTGCTGATCACGACCGTGCTACTGGGGAAGGTGTTCAGCCTCAAG 944
Query 758 AGTATACTCTCATAAAGATGGAAGTAGTGAAGCCATTTCCTCTGAAACTGGGTTCTTTGG 817
||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct 945 AGTATACACTCATAAAGATGGAAGTAGTCAAGCCATTCCCTCTGAAACTGGGTCCTTTGG 1004
Query 818 AAGGAAAGAGAGTGTTTTTGGCTGCAGCTACGCTGAGGCCTGAGACCATGTATGGACAAA 877
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1005 AAGGCAAGAGAGTGTTTTTGGCTGCAGCTACTTTGAGGCCTGAGACCATGTATGGACAAA 1064
Query 878 CAAACGCTTGGGTACTACCTGATGGGAAATATGGAGCTTATGAAATCA--G----TGA-- 929
||||||| |||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1065 CAAACGCATGGGTACTACCTGATGGGAAATATGGAGCTTATGAAATCAGCGAAACTGAGG 1124
Query 930 -----A-----ACTGATAGATCTGCACTCAACCTTGCCTACCAGAACTTCTCAAAGATCC 979
| ||||| ||| |||| ||||||||||| ||||||||||| || |||| ||
Sbjct 1125 TCTTCATCCTTACTGAGAGAGCTGCGCTCAACCTTGCGTACCAGAACTTTTCGAAGAACC 1184
Query 980 CTCAGAAGCCATCCTGCTTGGTCGAGTTGACCGGGTATGATCTGATTGGACTCCCTCTGA 1039
||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1185 CTCAGGAGCCTTCCTGCTTGGTTGAGTTGACCGGGTATGATCTGATTGGACTCCCTTTGA 1244
Query 1040 GGTCTCCTCTGTCAGTGAATGAGATCATCTATGCTCTGCCCATGTCAACGATTCTGACCA 1099
|||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||
Sbjct 1245 GGTCTCCTCTGTCAGTCAACGAGATCATCTATGCTCTGCCCATGTTGACCATTCTGACCA 1304
Query 1100 ACAAAGGTACCGGTATTGTCACCAGTGTGCCTAGTGATGCCCCTGATGATTACATGGCTT 1159
|||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1305 ACAAAGGTACTGGCATTGTCACCAGTGTGCCTAGTGATGCTCCTGATGATTACATGGCTT 1364
Query 1160 TACATGAGTTAA-AAACAAAGCCTGATAGTCGAGCA-AAGTATGGTGTGAAAGA-TGAGT 1216
|||| || |||| || |||||||| | || || | ||||||||||||||| | || |
Sbjct 1365 TACAAGATTTAATCAA-AAAGCCTGCTCTTCAAG-ATAAGTATGGTGTGAAA-ACGGAAT 1421
Query 1217 GGGTACCCTCTGATATCGTACCGGTTATCAGCATTCCAGAATTTGGGGATAAGGCTGCAG 1276
|| | ||| |||| ||| ||||| | |||| |||||| |||||||||||||| ||||| |
Sbjct 1422 GGTTGCCCACTGAAATCATACCGATCATCAACATTCCGGAATTTGGGGATAAAGCTGCTG 1481
Query 1277 AAAAGGTCTGCTTAGATCTGAAAATTCAAAGTCC-AAATGATAAGGACAAGCTTGTAGAA 1335
||||||||||||| |||||||||||| |||| || ||| |||||||| ||||||| |||
Sbjct 1482 AAAAGGTCTGCTTGGATCTGAAAATTAAAAG-CCAAAACGATAAGGAAAAGCTTGCAGAG 1540
Query 1336 GCGAAGAGGTTGATTTACCTGAAAGGATTCACTGAAGGAACAATGCTTGTTGGAGAGTTT 1395
|| |||||||||| ||||||||||||||| || |||||||| |||||| |||||||||||
Sbjct 1541 GCTAAGAGGTTGACTTACCTGAAAGGATTTACCGAAGGAACCATGCTTATTGGAGAGTTT 1600
Query 1396 GTTGGTAGGAAAGTTCAAGAAATCAAGCCCATTATCAAGAAAAAGCTCATAGAGTCTAAC 1455
|||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |
Sbjct 1601 TTTGGTAGGAAAGTTCAAGAAATTAAGCCCATTATCAAGACAAAGCTCATAGAGACTGGC 1660
Query 1456 GAGGCTATCATATACAGAGAACCTGAGAAGTCAGTGATGTCAAGATCCGGTGATGAATGT 1515
||||| ||||||||||| ||||| |||||| | |||||||||||||| ||||||||||||
Sbjct 1661 GAGGCAATCATATACAGTGAACCCGAGAAGCCGGTGATGTCAAGATCGGGTGATGAATGT 1720
Query 1516 GTTGTGGCTCTTACAGATCAGTGGTACATAACGTACGGCGAAGCAGAATGGCGGAAAATG 1575
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1721 GTTGTGGCTCTTACAGATCAGTGGTACATAACATACGGCGAATCAGAATGGCGGAAAATT 1780
Query 1576 GCTGAGGAATGCTTATCAAAAATGAACCTCTACTCTGAAGAAACAAGGCATGGCTTTGAG 1635
|||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct 1781 GCTGAGGAATGCCTATCAAAGATGAATCTCTACTCTGATGAAACAAGGCATGGCTTTGAG 1840
Query 1636 CACACTTTAAGCTGGCTCAATCAGTGGGCTTGCTCACGGTCTTTTGGTCTAGGAACTCGT 1695
|||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1841 CACACTTTGAGCTGGCTCAATCAGTGGGCTTGCTCACGATCTTTTGGTTTAGGAACTCGT 1900
Query 1696 ATTCCTTGGGATGAACAGTTCCTTGTGGAATCCTTATCTGATTCATCACTTTATATGGCC 1755
||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1901 ATTCCCTGGGATGAACAGTTCCTAGTGGAATCCTTATCTGATTCATCTCTTTATATGGCC 1960
Query 1756 TACTATACAGTTGCCCATATCTTTCACGACGGTGACATGTATAAAGGCAGCAAGTCGT-T 1814
|| || ||||||||||||||||||||||| || |||||||||||||| |||||||| | |
Sbjct 1961 TATTACACAGTTGCCCATATCTTTCACGATGGAGACATGTATAAAGGTAGCAAGTC-TCT 2019
Query 1815 GATCCGTCCTGAGCAGATGAATGATGAAGTTTGGGAGTATCTCTTCTGTGATGGTCCGTA 1874
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2020 GATCCGCCCTCAGCAGATGAATGATGAAGTTTGGGAGTATCTCTTCTGTGATGGCCCGTA 2079
Query 1875 TCCAAAATCATCTGATATTCCATCAGCTGTTTTAAGTAAGATGAAGCAGGAATTTGACTA 1934
|| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2080 CCCTAAATCATCTGATATTCCATCAGCTGTCTTAAGTGAGATGAAGCAGGAATTTGACTA 2139
Query 1935 CTGGTACCCGCTAGATCTTCGAGTTTCAGGGAAGGATCTTATTCAGAATCATTTGACATT 1994
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2140 CTGGTACCCGCTAGATCTTCGAGTTTCAGGAAAGGATCTTATTCAGAATCATTTGACATT 2199
Query 1995 TTTCATCTACAACCACACTGCACTAATGGAGAGTCGTAACTGGCCACGTGGTATCAGATG 2054
||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct 2200 TTTCATCTACAACCACACTGCACTAATGGCGAATCGTAACTGGCCACGTGGGATCAGATG 2259
Query 2055 TAATGGTCACATTATGCTCAATTCTGAGAAA-ATGTCAAAGTCCACTGGAAATTTCAGAA 2113
||||||||| || ||||| |||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 2260 TAATGGTCATATCATGCTGAATTCTGA-AAAGATGTCAAAGTCTACTGGAAATTTCAGAA 2318
Query 2114 CCCTGCGCCAGGCTATCGAAGAGTTCTCTGCCACTGCTACAAGGTTTTCTTTGGCTGATG 2173
||||||||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 2319 CCCTGCGCCAGTCTATTGAAGAATTCTCTGCCACTGGTACAAGGTTTTGTTTGGCTGATG 2378
Query 2174 CTGGTGATGGTGTTGACGATGCAAATTTTGTATTTGAAACTGCAAATGCTGCAATTTTGC 2233
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2379 CTGGTGATGGTGTTGATGATGCAAATTTTGCATTTGAAACTGCAAATGCTGCAATTTTGC 2438
Query 2234 GGCTGATGACACAGTTCAAATGGATGGAAGATGTTCTGGCTG-CTGAATCCTCTTTGAGA 2292
|| ||| | | || ||| |||||||||||| ||||||| || | ||||||||||| |||
Sbjct 2439 GGTTGACAAAAGAGCTCACATGGATGGAAGAAGTTCTGGATGTC-GAATCCTCTTTAAGA 2497
Query 2293 ACCGGACCTCCATCTACGTATGCTGATAAAGTGTTTGAGAATGACATGAAAATTGCTATC 2352
|| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||
Sbjct 2498 ACGGGACCTCCATCTACATATGCTGATAAAGTGTTTGAAAATGACATGAACATTGCTCTC 2557
Query 2353 AGATTGACTGAAAAAGCTTACAAAGATTGTTTGTTTAGGGAGGCACTTAAGAATGGGTTT 2412
||||||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||
Sbjct 2558 AGATTGACTGAAAGAGCGTACAAAGATTGTCTGTTTAGGGAGGCACTTAAAAATGGGTTT 2617
Query 2413 TACGACTTACAAGCTGCTCGAGATGAGTATACACTCTCCTGTGGCAGTG-ACGGAAATAT 2471
|||||||||||||||||||| |||||||||| |||||| ||||| | || | || | |
Sbjct 2618 TACGACTTACAAGCTGCTCGGGATGAGTATAGACTCTCTTGTGGAACTGGA-GGCA-T-- 2673
Query 2472 GAACCATGACTTGATACTGAACTTCATGGATGTGCAAACACGCCTCATTGAACCAATATG 2531
| ||||||||||| ||||||| || ||||||||||||||||||||||||| |||||| ||
Sbjct 2674 GCACCATGACTTGCTACTGAAATTTATGGATGTGCAAACACGCCTCATTGTACCAATCTG 2733
Query 2532 TCCTCAGTTTGCAGAATATATATGGAGGAAACTTTTGAAGAAGGAAGGTTCTGTGGTAAC 2591
||| || |||||||| ||| | ||||||||| ||||||| |||||||||| |||| | ||
Sbjct 2734 TCCCCATTTTGCAGATTATGTTTGGAGGAAAGTTTTGAATAAGGAAGGTTGTGTGCTCAC 2793
Query 2592 AGCAGGCTGGCCTAC-ATCAAATGAGCCAGATTTGGTTCTCAAGAGTGCTAACAAATATT 2650
|||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2794 AGCAGGCTGGCC-ACCATCAAATGAGCCAGATTTGGTGCTCAAGAGTGCAAACAAATATT 2852
Query 2651 TGCAAGATTCTATTGTCCTAATGAGAAAGCTTCTACCAAAACAGCTCTTAGGTTCCAAGA 2710
|||||||||||||||| |||||||||||||||| | |||||| |||| |||||||||||
Sbjct 2853 TGCAAGATTCTATTGTGTTAATGAGAAAGCTTCTTCAAAAACAACTCTCAGGTTCCAAGA 2912
Query 2711 AGGCTGCTAAGAAAGGTGCTCAAGTAGCAGCAGTGCCAGCGGGAAAATTAAAAGGCCTAG 2770
||| |||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||
Sbjct 2913 AGGGTGCTAAGAAAGGTGCTCAAGTAACAGCTGTGCCAGAGGGGAAGCTAAAAGGCCTAG 2972
Query 2771 TATATGTGAATGAGCAATTTGATGGATGGAGAGCTCACTGCCT-CGAGATTCTGCAAAGC 2829
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2973 TATATGTGAATGAGCAATTTGATGGATGGAGAGCTCACTGCCTGCG-GATTCTGCAAAGT 3031
Query 2830 AAATTTAACCAACAAACCTGTCGTTTTGCCCCTGATGCAGAGATACGGGCAGAACTAAGT 2889
| |||| |||| ||||||||| |||| |||| ||| ||||||| | ||||||||||||
Sbjct 3032 AGATTTGACCAGCAAACCTGTAGTTTCCCCCCGGATACAGAGATGCTTGCAGAACTAAGT 3091
Query 2890 G-AGATATTACAGAAGGAGGGA-----CT--A--GC-AG--AAAACGTTTACATGCCTTT 2936
| | | ||| | |||||||| || | || | |||| |||| |||||||||
Sbjct 3092 GCA-ACATTGTTGCAGGAGGGAAAAAACTTGAAAGCCATTCAAAAGGTTTGCATGCCTTT 3150
Query 2937 CGTTAAATTCAAGAAGAACGAGGCAATATCTATTGGCACTCAGGCTCTAAATTTGAGGCT 2996
| |||||||||||||| ||||||||||||||||||||||||||||||| || |||||| |
Sbjct 3151 CCTTAAATTCAAGAAGGACGAGGCAATATCTATTGGCACTCAGGCTCTGAACTTGAGGTT 3210
Query 2997 GCCTTTTGGAGAGATTGCAGTCCTTGAGAGTAATAAGGACTTGATCAAGCGGCAAGTTGG 3056
|||||||||||||| | ||||||| ||||||| ||||||||||||| ||||||| ||||
Sbjct 3211 ACCTTTTGGAGAGATCGAAGTCCTTCAGAGTAACAAGGACTTGATCAGGCGGCAACTTGG 3270
Query 3057 TCTTGAAGAGGTTGAAGTATATTCTGCAAGTAAGCCTGATGATGTTTCAAAAGCTGGTCC 3116
|||||||||||||||| |||||||||||||| | |||||||||||||||| |||||||||
Sbjct 3271 TCTTGAAGAGGTTGAAATATATTCTGCAAGTGACCCTGATGATGTTTCAATAGCTGGTCC 3330
Query 3117 ACATGCTTCACTGCTGAAGAAGAATCCTCCATCTCCGGGCAATCCAACCGCCATCTTTGT 3176
||||||||| ||||||| | |||||||||||||||| |||| ||||| |||||||||||
Sbjct 3331 ACATGCTTCGCTGCTGACGCAGAATCCTCCATCTCCAGGCAGCCCAACTGCCATCTTTGT 3390
Query 3177 GGCCAG 3182
| ||||
Sbjct 3391 GACCAG 3396
Score = 448 bits (242), Expect = 2e-124
Identities = 399/474 (84%), Gaps = 14/474 (3%)
Strand=Plus/Plus
Query 1 ATGGCATCTGAATCCAATAGCTTCAAGAAAAGAGATCGTCTACTTGAAATTGAGG-TAGC 59
|||||||| ||||| || |||| | | ||||||||||| ||||| ||||||| | |
Sbjct 146 ATGGCATCGGAATCGAAAAGCTACGCTAGGAGAGATCGTCTTCTTGAGATTGAGGCCA-C 204
Query 60 GGTTCGAAAGTGGTGGGAGGATGAGGATGTTTTCAGGGCTGAATCTCGTGATCATATTCC 119
||||||||||||||||| || |||||||| ||||| || |||||| |||| || ||||
Sbjct 205 TGTTCGAAAGTGGTGGGAAGACGAGGATGTATTCAGAGCCGAATCTTGTGAGAATCTTCC 264
Query 120 AAAGCCAGGAGAAAAGTTCTTCTCCACTTTTCCTTTTCCC-TATATGAATGGTTATCTTC 178
||| |||||||||||||| ||||| || |||| |||||| ||||||||||||||||| |
Sbjct 265 AAAACCAGGAGAAAAGTTTTTCTCAAC-CTTCCCTTTCCCGTATATGAATGGTTATCTAC 323
Query 179 ACATTGGGCATGCCTTCTCCCTCTCCAAGGTTGATTTTGCTTCTGCTTACCATAGACTTA 238
|||||||||||||||| || | |||||||||||||||||||||||||||||||| || |
Sbjct 324 ACATTGGGCATGCCTTTTCATTGTCCAAGGTTGATTTTGCTTCTGCTTACCATAGGCTAA 383
Query 239 GAGGTGCCAATGTGCTTCTTCCTTTTGGTTTCCACTGTACTGGTATGCCGATTAAGGCTT 298
|||| || |||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 384 GAGGAGCTAATGTGCTTCTTCCATTTGGTTTCCATTGTACTGGTATGCCAATTAAGGCTT 443
Query 299 CCGCGGATAAGCTTTC-TCGTGAGATCCAACAGTTTGGAAACCCTCCTGTCTTCCCTGCT 357
| |||||||||||| | ||||||||| |||||||||| ||||||||||| || |||||
Sbjct 444 CTGCGGATAAGCTT-CGTCGTGAGATTGAACAGTTTGGTAACCCTCCTGTGTTTACTGCT 502
Query 358 CAAGATA--ACCAA-GCTCCTCAAGTTCAGGAGGAGAGTAGTGATAC-ACCGGTGG-CT- 411
|||| | ||||| | |||| |||||||||||||||| |||||||| | | | |
Sbjct 503 GAAGACACCACCAAAGTTCCTGAAGTTCAGGAGGAGAGCAGTGATACTATAGCTTTACCG 562
Query 412 -TTACCGGGTCAGTTCAAGGGAAAGAAGTCTAAGGTGGCTGCAAAATCTGTTGG 464
|| |||||||||||||||||||||||||||||||| ||||| ||| ||| |||
Sbjct 563 ATT-CCGGGTCAGTTCAAGGGAAAGAAGTCTAAGGTTGCTGCCAAAGCTGGTGG 615
> AT1G50130.1 | Symbols: | pseudogene, putative leucyl tRNA synthetase,
similar to leucyl tRNA synthetase GB:BAA95667 GI:7804450
from (Homo sapiens); blastp match of 51% identity and
2.5e-213 P-value to GP|26340206|dbj|BAC33766.1||AK049472 unnamed
protein product {Mus musculus} | chr1:18566604-18569401
FORWARD LENGTH=2798
Length=2798
Score = 2477 bits (1341), Expect = 0.0
Identities = 1548/1645 (94%), Gaps = 26/1645 (2%)
Strand=Plus/Plus
Query 1545 AACGTACGGCGAAGCAGAATGGCGGAAAATGGCTGAGGAATGCTTATCAAAAATGAACCT 1604
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1174 AACGTACGGCGAATCAGAATGGCGGAAAATGGCTGAAGAATGCTTATCAAAAATGAATCT 1233
Query 1605 CTACTCTGAAGAAACAAGGCATGGCTTTGAGCACACTTTAAGCTGGCTCAATCAGTGGGC 1664
||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1234 CTACTCTGAGGAAACAAGGCATGGCTTTGAGCACACTTTGAGCTGGCTCATTCAGTGGGC 1293
Query 1665 TTGCTCACGGTCTTTTGGTCTAGGAACTCGTATTCCTTGGG---ATGAACAGTTCCTTGT 1721
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1294 TTGCTCACGGTCTTTTGGTCTAGGAACTCGTATTCCTTGGGATAATGAACGGTTCCTTGT 1353
Query 1722 GGAATCCTTATCTGATTCATCACTTTATATGGCCTACTATACAGTTGCCCATATCTTTCA 1781
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1354 GGAATCCTTATCTGATTCATCTCTTTATATGGCCTATTATACAGTTGCCCATATCTTTCA 1413
Query 1782 CGACGGTGACATGTATAAAGGCAGCAAGTCGTTGATCCGTCCTGAGCAGATGAATGATGA 1841
|||||| |||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct 1414 CGACGGAGACATGTATAAAGGAAGCAAGTCTTTGATCCGTCCTCAGCAGATGAATGATGA 1473
Query 1842 AGTTTGGGAGTATCTCTTCTGTGATGGTCCGTATCCAAAATCATCTGATATTCCATCAGC 1901
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1474 AGTTTGGGAGTATCTCTTCTGTGATGGTCCGTATCCAAAATCAACTGATATTCCATCAGC 1533
Query 1902 TGTTTTAAGTAAGATGAAGCAGGAATTTGACTACTGGTACCCGCTAGATCTTCGAGTTTC 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534 TGTTTTAAGTAAGATGAAGCAGGAATTTGACTACTGGTACCCGCTAGATCTTCGAGTTTC 1593
Query 1962 AGGGAAGGATCTTATTCAGAATCATTTGACATTTTTCATCTACAACCACACTGCACTAAT 2021
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1594 CGGAAAGGATCTTATTCAGAATCATTTGACATTTTTCATCTATAACCACACTGCACTAAT 1653
Query 2022 GGAG-AGTCGTAACTGGCCACGTGGTATCAGATGTAATGGTCACATTATGCTCAATTCTG 2080
|||| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1654 GGAGAAG-CGTAACTGGCCACGGGGTATCAGATGTAATGG-CACATTATGCTCAATTCTG 1711
Query 2081 AGAAAATGTCAAAGTCCACTGGAAATTTCAGAACCCTGCGCCAGGCTATCGAAGAGTTCT 2140
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1712 AGAAAATGTCAAAGTCAACTGGAAATTTCAGAACCCTGCGCCAGGCTATCGAAGAATTCT 1771
Query 2141 CTGCCACTGCTACAAGGTTTTCTTTGGCTGATGCTGGTGATGGTGTTGACGATGCAAATT 2200
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1772 CTGCCACTGCTACAAGGTTTTCTTTGGCTGATGCTGGTGATGGCGTTGACGATGCAAATT 1831
Query 2201 TTGTATTTGAAACTGCAAATGCTGCAATTTTGCGGCTGATGACACAGTTCAAATGGATGG 2260
|||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||||
Sbjct 1832 TTGTATTTGAAACTGCAAATGCTGCAATTTTGCGGCTGGTGAAACAGCTCGAATGGATGG 1891
Query 2261 AAGATGTTCTGGCTGCTGAATCCTCTTTGAGAACCGGACCTCCATCTACGTATGCTGATA 2320
|||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct 1892 AAGAAAAACTGGCTGCTGAATCCTCTTTGAGAACGGGGCCTCCATCTACATATGCTGATA 1951
Query 2321 AAGTGTTTGAGAATGACATGAAAATTGCTATCAGATTGACTGAAAAAGCTTACAAAGATT 2380
||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| |
Sbjct 1952 AAGTGTTTGAGAATGACATTAACATTGCTATCAGATTGACTGAAAAAGCGTACAAAGAAT 2011
Query 2381 GTTTGTTTAGGGAGGCACTTAAGAATGGGTTTTACGACTTACAAGCTGCTCGAGATGAGT 2440
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2012 GTTTGTTTAGGGAGGCACTTAAGAATGGGGTTTACGACTTACAAGCTGCTCGAGATGAGT 2071
Query 2441 ATACACTCTCCTGTGGCAGTGACGGAAATATGAACCATGACTTGATACTGAACTTCATGG 2500
||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2072 ATAGAAACTCTTGTGGCAGTGACGAAAATATGAACCATGACTTGATACTGAACTTCATGG 2131
Query 2501 ATGTGCAAACACGCCTCATTGAACCAATATGTCCTCAGTTTGCAGAATATATATGGAGGA 2560
|||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct 2132 ATGTGCAAACACGCCTCATTGAACCAATCTGTCCCCAGTTTGCAGAATATGTATGGAGGA 2191
Query 2561 AACTTTTGAAGAAGGAAGGTTCTGTGGTAACAGCAGGCTGGCCTACATCAAATGAGCCAG 2620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2192 AACTTTTGAAGAAGGAAGGTTCTGTGGTAACAGCAGGCTGGCCTACATCAAATGAGCCAG 2251
Query 2621 ATTTGGTTCTCAAGAGTGCTAACAAATATTTGCAAGATTCTATTGTCCTAATGAGAAAGC 2680
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2252 ATTTGGTTCTCAAGAGTGCTAACAAATATTTGCAAGATTCTATTGTCTTAATGAGAAAGC 2311
Query 2681 TTCTACCAAAACAGCTCTTAGGTTCCAAGAAGGCTGCTAAGAAAGGTGCTCAAGTAGCAG 2740
| || | ||||||||||||||||||||||||||||||||||||| |||
Sbjct 2312 T-CT-----------T---AGGTTCCAAGAAGGCTGCTAAGAAAGGTGCTCAAGTAACAG 2356
Query 2741 CAGTGCCAGCGGGAAAATTAAAAGGCCTAGTATATGTGAATGAGCAATTTGATGGATGGA 2800
||| |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 2357 CAGCGCCAGCGGGAAAGTTAATAGGCCTAGTATATGTGAATGAGCAATTTGATTGATGGA 2416
Query 2801 GAGCTCACTGCCTCGAGATTC-TGCAAAGCAAATTTAACCAACAAACCTGTCGTTTTGCC 2859
|||||||||||||| || ||| |||||||||||||| |||| ||||||| ||||||||||
Sbjct 2417 GAGCTCACTGCCTCAAG-TTCCTGCAAAGCAAATTTGACCAGCAAACCTATCGTTTTGCC 2475
Query 2860 CCTGATGCAGAGATACGGGCAGAACTAA-GTGAGATATTACAGAAGGAGGGACTAGCAGA 2918
||||||||||||||| |||||||||| | ||||||||||||||||| |||| ||||||
Sbjct 2476 CCTGATGCAGAGATAATTGCAGAACTAAAG-GAGATATTACAGAAGGATGGACAAGCAGA 2534
Query 2919 AAACGTTTACATGCCTTTCGTTAAATTCAAGAAGAACGAGGCAATATCTATTGGCACTCA 2978
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 2535 AAACATTTACATGCCTTTCGTTAAATTCAAGAAGAAGGAGGCAATATCTATTGGCATTCA 2594
Query 2979 GGCTCTAAATTTGAGGCTGCCTTTTGGAGAGATTGCAGTCCTTGAGAGTAATAAGGACTT 3038
||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||
Sbjct 2595 GGCTCTAAATTTGAGGCTGCCTTTTGGAGAGATTGAAGTCCTTAAGAGTAACATGGACTT 2654
Query 3039 GATCAAGCGGCAAGTTGGTCTTGAAGAGGTTGAAGTATATTCTGCAAGTAAGCCTGATGA 3098
||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||
Sbjct 2655 GATCAAGCGGCAACTTGGTCTTGAAGAG-TTGAAGTATATTCTGCAAGTGACCCTGATGA 2713
Query 3099 TGTTTCAAAAGCTGGTCCACATGCTTCACTGCTGAAGAAGAATCCTCCATCTCCGGGCAA 3158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2714 TGTTTCAAAAGCTGGTCCACATGCTTCACTGCTGAAGAAGAATCCTCCATCTCCGGGCAA 2773
Query 3159 TCCAACCGCCATCTTTGTGGCCAGG 3183
||||||||||||||||||| |||||
Sbjct 2774 TCCAACCGCCATCTTTGTGACCAGG 2798
Score = 937 bits (507), Expect = 0.0
Identities = 626/681 (92%), Gaps = 18/681 (3%)
Strand=Plus/Plus
Query 461 TTGGTCTTACTGACAGTGAGATTGCAAGATTTCAAGATCCATATGAATGGTTGTATTACT 520
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 494 TTGGTCTTACTGACAGTGAGATTGCAAGATTTCGGGATCCAGATGAATGGTTGTATTACT 553
Query 521 TTCCTCCTTTAGCTGTTGAAGATCTCAAGGCTTATGGATTGGGTTGTGATTGGAGACGCT 580
|||| ||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| |
Sbjct 554 TTCCCCCTTTGGCTGTTGAAGATCTCAAGGCATATGGATTGGGCTGTGACTGGAGACGGT 613
Query 581 CATTCGTGACTACTGATGTTAATCCCTTTTTCAATGCCTTTGTAAGGTGGCAGATGAGGA 640
|||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||
Sbjct 614 CATTTGTGACTACTGATGTTAATCCTTTTTTCGATGCCTTTGTGAGGTGGCAGATGAGGA 673
Query 641 AGTTGAAATCTATGGGAAAGATTGTCAAAGACTGTAGGTATACAGTATTCTCACCTTTAG 700
|||||||| || |||||||||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 674 AGTTGAAAGCTCTGGGAAAGATTGTCAAAGACTGTAGGTACACAATATTCTCACCTCTAG 733
Query 701 ATGGTCAGCCTTGTGCTGATCACGACCGTGCTACTGGTGAAGGTGTTCAGCCTCAAGAGT 760
|| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 734 ATCGCCAGCCTTGTGCTGATCACGACCGTGCTACTGGTGAAGGTGTTCAGCCTCAGGAGT 793
Query 761 ATACTCTCATAAAGATGGAAGTAGTGAAGCCATTTCCTCTGAAACTGGGTTCTTTGGAAG 820
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 794 ATACTCTCATAAAGATGGAAGTAGTGAAGCCATTTCCTCTGAAACTGAGTCCTTTGGAAG 853
Query 821 GAAAGAGAGTGTTTTTGGCTGCAGCTACGCTGAGGCCTGAGACCATGTATGGACAAACAA 880
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 854 GAAAAAGAGTGTTTTTGGCTGCAGCTACTTTGAGGCCTGAGACCATGTATGGACAAACAA 913
Query 881 ACGCTTGGGTACTACCTGATGGGAAATATGGAGCTTATGAAATCAGTGAAACTGAT---- 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 ACGCTTGGGTACTACCTGATGGGAAATATGGAGCTTATGAAATCAGTGAAACTGATGTCT 973
Query 937 --A--------GA----TCTGCACTCAACCTTGCCTACCAGAACTTCTCAAAGATCCCTC 982
| || ||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 974 TCATCCTTACTGAGAGATCTGCACTCAACCGTGCCTACCAGAACTTCTCAAAGAACCCTA 1033
Query 983 AGAAGCCATCCTGCTTGGTCGAGTTGACCGGGTATGATCTGATTGGACTCCCTCTGAGGT 1042
|||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1034 AGAAACCATCTTGCTTGGTCGAGTTGACCGGTTATGATCTGATTGGACTCCCTCTGAAGT 1093
Query 1043 CTCCTCTGTCAGTGAATGAGATCATCTATGCTCTGCCCATGTCAACGATTCTGACCAACA 1102
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1094 CTCCTCTGTCAGTGAACGAGATCATCTATGCTCTGCCCATGTCAACGATTCTAACCAACA 1153
Query 1103 AAGGTACCGGTATTGTCACCA 1123
||||||| ||||| |||||||
Sbjct 1154 AAGGTACTGGTATCGTCACCA 1174
Score = 710 bits (384), Expect = 0.0
Identities = 438/464 (94%), Gaps = 3/464 (1%)
Strand=Plus/Plus
Query 1 ATGGCATCTGAATCCAATAGCTTCAAGAAAAGAGATCGTCTACTTGAAATTGAGGTAGCG 60
||||||||||||||||||||||| ||||||||||||||| || || |||||||||||
Sbjct 1 ATGGCATCTGAATCCAATAGCTTTGCGAAAAGAGATCGTCTTCTCGAGATTGAGGTAGCA 60
Query 61 GTTCGAAAGTGGTGGGAGGATGAGGATGTTTTCAGGGCTGAATCTCGTGATCATATTCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 GTTCGAAAGTGGTGGGAGGATGAGGATGTTTTCAGGGCTGAATCTCGTGATCATCTTCCA 120
Query 121 AAGCCAGGAGAAAAGTTCTTCTCCACTTTTCCTTTTCCCTATATGAATGGTTATCTTCAC 180
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 121 AAGCCAGGAGAAAAGTTCTTCTCCACTTTCCCTTTTCCCTATATGAATGGTTATCTACAC 180
Query 181 ATTGGGCATGCCTTCTCCCTCTCCAAGGTTGATTTTGCTTCTGCTTACCATAGACTTAGA 240
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 181 ATTGGGCATGCTTTCTCACTCTCCAAGGTTGATTTTGCTTCTGCTTACCATAGACTAAGA 240
Query 241 GGTGCCAATGTGCTTCTTCCTTTTGGTTTCCACTGTACTGGTATGCCGATTAAGGCTTCC 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 241 GGTGCCAATGTGCTTCTTCCTTTTGGTTTCCACTGTACTGGTATGCCTATTAAGGCTTCC 300
Query 301 GCGGATAAGCTTTCTCGTGAGATCCAACAGTTTGGAAACCCTCCTGTCTTCCCTGCTCAA 360
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 301 GCGGATAAGCTTTCTCGTGAGATCCTACAGTTTGGAGACCCTCCTGTCTTCCCTGCTCAA 360
Query 361 GATAACCAAGCTCCTCAAGTTCAGGAGGAGAGTAGTGATACACCGGTGGCTTTACCGGGT 420
||||||| ||||||||||||||| |||||| | ||||||||||||| ||||| |||||
Sbjct 361 GATAACCTAGCTCCTCAAGTTCACGAGGAGGGCAGTGATACACCGG---CTTTAACGGGT 417
Query 421 CAGTTCAAGGGAAAGAAGTCTAAGGTGGCTGCAAAATCTGTTGG 464
|||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 418 CAGTTCAAGGGAAAGAAGTCTAAGGTGGCTGCGAAATCTGGTGG 461
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 158477372937
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5