BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314503
Length=2391
Score E
Sequences producing significant alignments: (Bits) Value
AT1G51405.1 | Symbols: | myosin-related | chr1:19057780-190595... 2089 0.0
AT1G51410.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1664 0.0
> AT1G51405.1 | Symbols: | myosin-related | chr1:19057780-19059582
FORWARD LENGTH=1464
Length=1464
Score = 2089 bits (1131), Expect = 0.0
Identities = 1361/1464 (93%), Gaps = 47/1464 (3%)
Strand=Plus/Plus
Query 1 ATGGAGAGAAGTAACGAAGCGTTGATGATGAGGAAATCGAAGTGGCAGTACCCAC-A--- 56
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1 ATGGAGAGACGTAACGAAGCGTTGATGATTAGGAAATCGAAGTGGCAGTACCCACAAGTG 60
Query 57 --------GACGCCGAGGATTCTTCAGTTGCCACGTAGGCATAGTGTTCGACGGAATGCT 108
||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 61 GGTTCTCCGACGCCGAGGATTCTTCAGTTGCCACGGAGGCATAGTGTTCGACGAAATGCT 120
Query 109 GCAAAGGGTTTGAAGACAAC-GCTTTCTTCGTCGTCTCAGAAGGATCGGAGAGTGAAACT 167
||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 121 TCAAAGGGCTTGAAGACAACAG-TTTCTTCGTCGTCTCAGAAGGATCGGAGAGTGAAACT 179
Query 168 GGAGGTTCTGTTTCATCAAGAGAGGACTTTTGATCGAGGGGCATCGATTGTGAT-G-G-- 223
||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct 180 GGAGGTTTTGTTTCATCAAGAGAGGACTTTTGATCGGGGGGCATCGATTGTGATGGTGAA 239
Query 224 TG--AA------TGAG--G-A-G--GAAG-A-A-GGAAGGAGAAGAGGGAAAGTTGCAGA 266
|| || |||| | | | |||| | | ||||||||||||||||||||||||||
Sbjct 240 TGATAATGGTGGTGAGAAGAAGGATGAAGAAGAGGGAAGGAGAAGAGGGAAAGTTGCAGA 299
Query 267 TGGGAGAGAGA-T--TG-G--TGGGTT-TCCATCTTCTTCTGCGGCTGATGAAGTTGAGG 319
||||||||||| | || | |||||| | | ||||||||||||| ||||||||||||||
Sbjct 300 TGGGAGAGAGATTGGTGTGTCTGGGTTGT-CTTCTTCTTCTGCGGTTGATGAAGTTGAGG 358
Query 320 AAGCTAAGTGGAGGTTTCAAGCGGAGATGTTGAGATCAGAGTGTAATTTGTTAAGAATAG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 AAGCTAAGTGGAGGTTTCAAGCGGAGATGTTGAGATCAGAGTGTAATTTGTTAAGAATAG 418
Query 380 AAAAAGAGATTGCTTTGAAGAAGATGGAGAGGAGGAAGAAGCGAATGGAGAGGACGCTGA 439
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 419 AAAAAGAGATTGCTTTGAAGAAGATGGAGAGGAGGAAGAAGCGAATGGAGCGGACGCTGA 478
Query 440 GATCTGCTGTTCTTACTCTTCTCTCTGGGAAACAGAGAATCTCTGAAGGGAAGAAAGAGA 499
|||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||
Sbjct 479 GATCTGCTGTTCTTACTCTTCTATCTGGGAAAGAGAGAATCTCTGAAGGGACGAAAGAGA 538
Query 500 GCAAGGTTTTGGAAGATGAGATAAGCTATTTGGTTGAGAAACTGAATGAGTTAAAGTCTC 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 GCAAGGTTTTGGAAGATGAGATAAGCTATTTGGTTGAGAAACTGAATGAGTTAAAGTCTC 598
Query 560 CAAAGGTTAAGGACATGGAAGCTAGAAACTTCAGACATAATTTTGATAAGCAAGCTTCTG 619
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 599 CAAAGGTTAAGGACATGGAAGCTAGAAACTTCAAACATAATTTTGATAAGCAAGCTTCTG 658
Query 620 TTTTAAGAAGAGAGCTGGAGAGGTTTGATGAGGCAGTTTCCGAAGAGGTTTGTGTCAAAG 679
|||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 659 TTTTAAGAAGAGAGCTAGAGAGGTTCGATGAAGCAGTTTCCGAAGAGGTTTGTGTCAAAG 718
Query 680 GGATTCAGAAAATGGCAGAAGCTAGCTTCTCTGTCCATTCTGATCAAAGCATTCTTAGAA 739
||||||||||||||||||| ||||||||||| |||||||||||||||| | |||||| |
Sbjct 719 GGATTCAGAAAATGGCAGAGGCTAGCTTCTCCGTCCATTCTGATCAAAACGCTCTTAGGA 778
Query 740 ACAATAATGGAAATATAGATACATTGAGTAGTAAAATGGAGGCGTTATCGAAAGGGGTTT 799
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 779 ACAATAATGGAAATATAGATACATTGAGTAGTAAAATGGAGGCGTTGTCAAAAGGGGTTT 838
Query 800 TGTTGGAAAGAATGGAGAAGGAATATGGATCGACTCTCGTTGCACCGTCTTCAAGCTCTG 859
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 839 TGTTGGAAAGAATGGAGAAAGAATATGGATCGAGTCTCGTTGCACCGTCTTCAAGCTCTG 898
Query 860 TACAAGACATGTATAGTAAGGCAATTAAAGCGCACGAGGAAAAGAAAGACTGTTCTAGAC 919
|||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 899 TACAAGACATGTATTGTAAGGGAATTAAAGCGCATGAGGAAAAGAAAGACTGTTCTAGAC 958
Query 920 ACTGCAAAGCAGTTATGAGGAAGATCGCGGATGAAGTAAGAGCTGAAGCAGAGCAATGGT 979
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 959 ACTGCAAAGTAGTTATGAGGAAGATTGCGGATGAAGTAAGAGCTGAAGCAGAGCAATGGT 1018
Query 980 CACAAATGCAAGAGATGTTGAATCAAGTGAGAAAAGAAATGGAAGAGCTTCAATCATGTC 1039
||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct 1019 CACAAATGCAAGAGATGTTGAATCAAGTGAGAAAAGAAATGGAGGAACTTCAATCTTGTC 1078
Query 1040 GTGATTTCTGGCAAAACCGCGCTCTTGA-GTCAGATGCTGAGATACAAAATCTACATTCC 1098
|||||||||||||||||||||| || || | ||||| | |||||||||||||||||||||
Sbjct 1079 GTGATTTCTGGCAAAACCGCGCCCTCGAAG-CAGATTCCGAGATACAAAATCTACATTCC 1137
Query 1099 TCGGTTGAAGGATGGCGAAGAAAGGCGTTATCATCAGAAGCAAAGTTAAAAAACCTACAA 1158
|| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1138 TCTGTTGAAGGATGGCGAAGAAAGGCGTTATCATCAGAGGCAAAGTTGAAAAACCTACAA 1197
Query 1159 GAAGAGGTTTGCGAATTACAAGAAGAGATCAAAAGTA-TGAGGAAGGAAGATAAGTTAGA 1217
| ||||||||||| |||||||||||||||||| || | |||| |||||||||||||||||
Sbjct 1198 GCAGAGGTTTGCGGATTACAAGAAGAGATCAAGAG-ACTGAGAAAGGAAGATAAGTTAGA 1256
Query 1218 ACTAGAGAAGAACAAATTGCCATCAGAGTCAGAGAAAAGGGTATTGATTTGTCGGTTAAA 1277
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 ACCAGAGAAGAACAAATTGCCATCAGAGTCAGAGAAAAGGGTATTGATTTGTCGGTTAAA 1316
Query 1278 AGAAAACCGACATAGCAACAATGGAGATTGGTCTAAGTACAAAGAAGGAAGAACAACAAA 1337
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1317 AGAAAACCGACATAGCAACAATGGAGATTGGTCCAAGTACAGTGAAGGAAGAACAACAAA 1376
Query 1338 ACCGTCGAGCTCGAGACCGCCTATGAGGGAAGTTAAGAACAGTTCAGCCACAGCAAGGCA 1397
|||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct 1377 ACCGTCGAGCTCGAGACCGCCTTTGAGGGAAGTTAAGAACAGTTCAGTCATAGCAAGGCA 1436
Query 1398 GAGAAACTCCAATGTCATCAAAAT 1421
||||||||||||| |||| |||||
Sbjct 1437 GAGAAACTCCAATATCATGAAAAT 1460
> AT1G51410.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:19059885-19061424 FORWARD LENGTH=978
Length=978
Score = 1664 bits (901), Expect = 0.0
Identities = 948/971 (98%), Gaps = 2/971 (0%)
Strand=Plus/Plus
Query 1422 CGAAGAAGAGAAGACAGTGTGTGTGACAGGAGCTTCAGGTTACATTGCTTCATGGATCGT 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 CGAAGAAGAGAAGACAGTGTGTGTGACAGGAGCTTCAGGTTACATTGCTTCATGGATCGT 68
Query 1482 TAAGCTTCTCCTTCTCCGTGGCTACACCGTTAAAGCCTCTGTTCGCGATCCAAATGATCC 1541
||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 69 TAAGCTTCTTCTTCTCCGTGGTTACACCGTTAAAGCCTCTGTTCGTGATCCAAATGATCC 128
Query 1542 GAGGAAAACAGAGCATTTGCTTGCATTGGAAGGAGCAGAGGAAAGGCTTAAATTGTTCAA 1601
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 AAGGAAAACAGAGCATTTGCTTGCATTGGAAGGAGCAGAGGAAAGGCTTAAATTGTTCAA 188
Query 1602 AGCAAACTTGTTAGAAGAAGGCTCTTTCGATTCAGCAATCGATGGTTGCGAAGGAGTTTT 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 189 AGCAAACTTGTTAGAAGAAGGCTCTTTCGATTCAGCAATCGATGGTTGCGAAGGAGTTTT 248
Query 1662 CCACACCGCATCGCCATTCTATCATGACGTCAAGGACCCTCAGGCTGAGTTAATTGATCC 1721
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 249 CCACACCGCATCGCCATTCTATCATGACGTCAAGGACCCTCAGGCTGAGTTACTTGATCC 308
Query 1722 AGCAGTGAAAGGAACAATCAATGTTCTTAGCTCTTGTTTGAAGACTTCCTCTGTTAAAAG 1781
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 309 GGCAGTGAAAGGAACAATCAATGTTCTAAGCTCTTGTTTGAAGACTTCCTCGGTTAAGAG 368
Query 1782 AGTCGTCTTAACCTCATCTATAGCAGCTGTTGCTTTCAATGGAATGCCTCGAACACCCGA 1841
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 369 AGTCGTCTTAACCTCATCGATAGCAGCTGTTGCTTTCAATGGAATGCCTCGAACACCCGA 428
Query 1842 AACCATAGTTGACGAAACTTGGTTTGCCGATCCTGACTATTGCAGAGCTTCCAAGCTATG 1901
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 429 AACCATAGTTGACGAAACTTGGTTCGCCGATCCTGACTATTGCAGAGCTTCCAAGCTATG 488
Query 1902 GTATGTATTGTCGAAGACATTAGCTGAAAACGCAGCGTGGAAATTCGCGAAAGAGAATGA 1961
||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 489 GTATGTACTCTCGAAGACATTAGCTGAAAACGCAGCGTGGAAATTCGCAAAAGAGAACAA 548
Query 1962 TTTACAGCTGGTTTCGATAAATCCAGCTATGGTGATTGGTCCTCTCTTACAGCCAACGCT 2021
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 549 TTTACAGCTGGTTTCGATAAATCCGGCTATGGTGATTGGTCCTCTCTTACAGCCAACGCT 608
Query 2022 AAACACTAGCGCTGCTGCAGTACTAAGCTTGATCAAAGGAGCACAAACGTTTCCTAATGC 2081
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 AAACACTAGTGCTGCTGCAGTACTAAGCTTGATCAAAGGAGCACAAACGTTTCCTAATGC 668
Query 2082 GACGTTCGGGTGGGTTAACGTTAAAGATGTAGCGAACGCTCATATTCAAGCGTTTGAGAA 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 GACGTTCGGGTGGGTTAACGTTAAAGATGTAGCGAACGCTCATATTCAAGCGTTTGAGAA 728
Query 2142 TCCA-ACTGCTGATGGGAGATACTGTTTAGTGGAGAGAGTTGCCCATTACTCTGAAGTTG 2200
|||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 729 TCCAGA-TGCTGATGGGAGATACTGTTTAGTGGAGAGAGTTGCTCATTACTCTGAAGTTG 787
Query 2201 TTAACATTTTGCATGATCTTTACCCTGATTTTCAACTCCCTGAGAAGTGTGCAGATGAAA 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 TTAACATTTTGCATGATCTTTACCCTGATTTTCAACTCCCTGAGAAGTGTGCAGATGAAA 847
Query 2261 AGATGTATATTCCAACATATAAAGTGTCTAAAGAGAAAGCAGAGTCTCTTGGGGTTGAGT 2320
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 AGATATATATTCCAACATATAAAGTGTCTAAAGAGAAAGCAGAGTCTCTTGGGGTTGAGT 907
Query 2321 TTGTGCCATTGGAAGTTAGCATTAAAGAGACTGTAGAGAGCTTGAGAGATAAAGGGTTCA 2380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 908 TTGTGCCATTGGAAGTTAGCATTAAAGAGACTGTAGAGAGCTTGAGAGATAAAGGGTTCA 967
Query 2381 TCAGATTCTGA 2391
||||||| |||
Sbjct 968 TCAGATTTTGA 978
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118724288925
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5