BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg314745 Length=567 Score E Sequences producing significant alignments: (Bits) Value AT2G15025.1 | Symbols: | Beta-galactosidase related protein | ... 523 6e-148 > AT2G15025.1 | Symbols: | Beta-galactosidase related protein | chr2:6501126-6501704 REVERSE LENGTH=579 Length=579 Score = 523 bits (283), Expect = 6e-148 Identities = 486/579 (84%), Gaps = 33/579 (6%) Strand=Plus/Plus Query 1 ATGATCTTCTCTCTAAG-GAGAGCTGATTACCGAAACTTCTCCAATCCCTTTTCCCCGTT 59 ||||| ||||||||| | | ||| |||||||||||| |||| ||||| ||||| || || Sbjct 1 ATGATTTTCTCTCTACGTG-GAGATGATTACCGAAATTTCTTCAATCATTTTTCTCCATT 59 Query 60 TCCTCTGAATACAGAATCTGAACAAGTGTTATCCAACGTTTTTAAGGTTGATATTCATGA 119 ||| |||||||| |||||||| || |||||| |||||| ||||||||||||||||||||| Sbjct 60 TCCGCTGAATACTGAATCTGAGCATGTGTTACCCAACGATTTTAAGGTTGATATTCATGA 119 Query 120 AATCAAAGGTTTGAGGAACTATGGCATTATGA-TCCCGTCTCTATGGAGCGGTGGTTACC 178 |||||||||||||||||||||||| ||||||| ||| | ||| ||||||||||| ||||| Sbjct 120 AATCAAAGGTTTGAGGAACTATGGAATTATGAGTCCTG-CTCCATGGAGCGGTGCTTACC 178 Query 179 TAAA-ATTCCTCAACT-CTTTCCCTCTAACCTCACTCGACGACAGAACCAGC-TTAACCT 235 ||| ||||| |||| ||| || || |||| | | | | | | || || | ||||||| Sbjct 179 -AAAGCTTCCTTAACTCCTTACCTTCAAACC-CGC-C--C-A-ACAA-CA-CTTTAACCT 229 Query 236 CTCTCTTTGCCGATGAGCAATTCCAACTCGCTCTTCTCGTACCGGCGAGAACCTCGGCTA 295 ||||| ||| |||||||||| ||| |||| | |||||| ||||||||||||||| ||| Sbjct 230 CTCTCCTTGTCGATGAGCAAACCCAGCTCG--C-TCTCGTGCCGGCGAGAACCTCGACTA 286 Query 296 TGGAACTC-TATTCAACGTCACTTAGTCTTTTGACCGTGACTATTGTATCATCTAACGCC 354 ||||| || | |||||||||||||||||||||||||||| | ||||| || ||||||| Sbjct 287 TGGAA-TCGTTTTCAACGTCACTTAGTCTTTTGACCGTGGCCATTGTTTCGTCTAACGT- 344 Query 355 TC-GTCCGTGGATGACTCTTCGACAAACCGTGTTATCATTTGCACCAATTTGCTTCATAG 413 || || || ||||||| ||||||||||||||||| || ||||||||||| |||| |||| Sbjct 345 TCCGTATGTAGATGACTTTTCGACAAACCGTGTTACCACTTGCACCAATTCGCTTTATAG 404 Query 414 CTTTGGCCTCCAAGCTCTCATGGATCCCTTGTCGAACTAt-ttttgctatt-tttgtgta 471 ||||||| ||||| ||||||||||||| |||||||||||| |||| || || ||| |||| Sbjct 405 CTTTGGCTTCCAAACTCTCATGGATCCTTTGTCGAACTATCTTTT-CT-TTCTTTATGTA 462 Query 472 gcatttgctttaacctttgtttgttgttgctacttt-gttttAAGCCTT-TCTATCCTTG 529 |||||||||| ||||||||| ||||||||||| ||| | |||||||||| | |||| ||| Sbjct 463 GCATTTGCTTCAACCTTTGTCTGTTGTTGCTA-TTTCGCTTTAAGCCTTGT-TATCTTTG 520 Query 530 TACCCCTGGCTACTT-TGAACCTTGTTTCTATTGGATGA 567 || || | |||||| | |||||||||| |||||||||| Sbjct 521 TATCCTTAACTACTTGT-AACCTTGTTTTTATTGGATGA 558 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27226907674 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5