BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314795
Length=3114
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55820.1 | Symbols: | Kinase-related protein of unknown fun... 1376 0.0
AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 | chr1:2086... 833 0.0
AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 | chr4:1338... 283 6e-75
> AT1G55820.1 | Symbols: | Kinase-related protein of unknown function
(DUF1296) | chr1:20864339-20867611 FORWARD LENGTH=1979
Length=1979
Score = 1376 bits (745), Expect = 0.0
Identities = 873/931 (94%), Gaps = 24/931 (3%)
Strand=Plus/Plus
Query 2199 AGAAGAAGCATCAACATTTTCTGAAGTTAAGGATTATGGGATAACAAATTCTGCACCTGG 2258
||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct 865 AGAAGAAACATCAACAGTTTCTGAAGATAAGGATTATGGGATATCAAATTCTGCAACTGG 924
Query 2259 AGCTGAGCCAGTGGTGCACTCGGATCACATTGTCCCACCTGTAGAAGAAGTACTGAAGGA 2318
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 925 AGCTGAGCCTGTGGTGCACTCGGATCACATTGTCCCACCTGTAGAAGAAGTACCGAAGGA 984
Query 2319 GGAAGCTTTATCAAACACAGAAACTCATC-AA------AT--T------GCTCCACTCAG 2363
||||||||||||||||||||||||||||| || || | |||||||||||
Sbjct 985 GGAAGCTTTATCAAACACAGAAACTCATCAAATTGCTTATGGTCAAGAAGCTCCACTCAG 1044
Query 2364 TGTGTTTGGTCTTGTCCCCTCGTTGTCAGCAATAGGCCAACCCGTTAACACAGAAGCAGC 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 TGTGTTTGGTCTTGTCCCCTCGTTGTCAGCAATAGGCCAACCCGTTAACACAGAAGCAGC 1104
Query 2424 AGAGACTCAGCCCGGAAATTCCAACTCTCCAGCTATTTCATTAGTATCATATCCTCCAGA 2483
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1105 GGAGACTCAGCCCGGAAATTCCAACTCTCCACCTATTTCATTAGTATCATATCCTCCAGA 1164
Query 2484 TCAGAGCTCCATAGCAGCAGCCTCTCAACAGGCAAATTTTCTTAGGCAGCAATATCCACC 2543
|||||||||||||||||||||| |||||||| |||||||||||||||||||||| || ||
Sbjct 1165 TCAGAGCTCCATAGCAGCAGCCACTCAACAGACAAATTTTCTTAGGCAGCAATACCCTCC 1224
Query 2544 CAATTTCTTCCCTTACGGTCCCTATTACTCACCGTATTATATGCCACCGCCATACATTCA 2603
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 1225 CAATTTCTTCCCTTACGG---CTATTACTCACCGTATTATATGCCACCGCCGTACATTCA 1281
Query 2604 CCAGTTCTTGAGCCCAAACGGGATCCCTCAGCAGTCtttttttCCACCAGGAGCTGCTCT 2663
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1282 CCAGTTCTTGAGCCCAAACGGGATCCCTCAGCAGTCTTATTTTCCACAAGGAGCTGCTCT 1341
Query 2664 AACAGCACCTTCTCATGTAAACCCAGTAGGCAACACTGAAAACCCTCCCACCACAAACCC 2723
||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||
Sbjct 1342 AACAGCACCTTCTCATGCAAAACCAGTTGACAACACTGAAAACCCTCCCACCACAAACCC 1401
Query 2724 TTACCTACACACTTCTCCCATGGTTGCTAGCAGCATCCCATCTGCAACCGCCTTCAATTC 2783
||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||
Sbjct 1402 TTACCTACACACTTCTCCCATGGTTGCTAGCAGCATCCCATCTACAACCACCTTAAATTC 1461
Query 2784 TATCCATAGTGAAGAAAAGGCATCTCCCCAGACTGAAAGTGCAGCTACATGGATTGGGCA 2843
|||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct 1462 TATCCATAGTGAAGAAAAGGCATCTCACCTGACTGAAAGTGCAGCTGCATGGATTGGGCA 1521
Query 2844 GGGATTTGGCAACCTGCAGGTGAATCCAATGTACAACCTAGCATTCCAAGGTCAGCCACT 2903
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 1522 GGGATTTGGCAACCTGCAGGTGAATCCAATGTATAACCTAGCATACCAAGGTCAGCCACT 1581
Query 2904 TGGTTTTCCGGTCGTGCAGGCTGGTCATGGTGGCCTCATGGGAATACACCAACCAACACA 2963
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1582 TGGTTTTCCAGTCGTGCAGGCTGGTCATGGTGGCCTCATGGGAATGCACCAACCAACACA 1641
Query 2964 GCCCATGGCTGCTGCTTCAACTACATATCAGACCTTACCGCCACCGCCACCGCCACACAC 3023
||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1642 GCCCATGGCAGCTGCTTCAACTACATATCAGACCTTACC---ACC---ACCGCCACACAC 1695
Query 3024 AACAACAGCTATGGGTGAACCCATAGGACACCCGCACATTGCTTATCAGCAACCTCAAGC 3083
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 AACAACGGCTATGGGTGAACCCATAGGACACCCGCACATTGCTTATCAGCAACCTCAAGC 1755
Query 3084 TACCCTAACGAATTGGGTTAACAACTATTAG 3114
| | |||||||||||||||||||||||||||
Sbjct 1756 TGCTCTAACGAATTGGGTTAACAACTATTAG 1786
Score = 1127 bits (610), Expect = 0.0
Identities = 735/793 (93%), Gaps = 17/793 (2%)
Strand=Plus/Plus
Query 1374 GGTTTCGATTCCTTACCGTCTCCGCAAAACCCTTCAGAGTATTAGAGAGAT-TACCGGCA 1432
||||||||||||||||| |||||||||||||||||||| || |||||| | |||||| |
Sbjct 88 GGTTTCGATTCCTTACCATCTCCGCAAAACCCTTCAGAAAATCAGAGAG-TATACCGGAA 146
Query 1433 AGCAGCACTCCGATGAGGATATCTTCGCTGTCTATAAGGATTCCTTCAATGATCCTTATG 1492
|||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct 147 AGCAGCACTCGGATGAGGATATCTTTGCCGTCTATAAGGATTCCTTCAATGATCCTCATG 206
Query 1493 AGACCGCCCAAAAGCTCCTCTTCTTAGATACATTTCATGAGGTGAGAAGTAAAAGGGAGA 1552
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 AGACCGCTCAGAAGCTCCTCTTCTTAGATACATTTCATGAGGTGAGAAGTAAAAGGGAGA 266
Query 1553 AAAAGAAGGAGGCAAGTAATATAGTGCCAGTTACACAAGCAAGTGGCAGAGGTGGTCGGA 1612
|||||||||| || ||||||||||||||||||| |||||||||||||||||||||
Sbjct 267 AAAAGAAGGA-GC-----CTATAGTGCCAGTTACACAACCAAGTGGCAGAGGTGGTCGGA 320
Query 1613 GGAACTTTGCTTCAAGTAACTCTTATCAAGGTAATGGAAGAAATGCATCTTTTAAAAGGG 1672
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 321 GGAACTTTGCTTCAAGTAACTCTTATCAAGGTAGTGGAAGAAATGCTTCTTTTAAAAGGG 380
Query 1673 AAAATGGAGCTAATCATGTAACAAGAGGTTCTAGAACTGCTCTGCCTGTCACTAACAAAG 1732
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 381 AAAATGGAGCTAATCATGTAACAAGAGGTTCTAGAACTGCTCAGCCTGCCACTAACAAAG 440
Query 1733 CAAGCAACAATAACATCACAGTACCTAATGAAATAAAGGTTTCTGGTCCTACTAGTCTTC 1792
|||| | |||||||||||||||||||||| |||||||||||||||| ||||| |||
Sbjct 441 CAAG---C---AACATCACAGTACCTAATGAAACAAAGGTTTCTGGTCCTGCTAGTATTC 494
Query 1793 CGAGTGAGGTCAGCAATCATGATAAAGTTCAAGATGATCCTTCTTTGATTTCTGCTTCAC 1852
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 495 CGAGTGAGGTCAGCAATC---ATAAAGCTCAAGATGATCCTTCTTTGATTTCTGCTTCAC 551
Query 1853 GTTGCAGTAGCCAGTCAGATCAAGCCACAGAAATCGAGACTGCGTCCAAACAAGGCAAAA 1912
||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 552 GTTGCAGTAGCAAGTCAGATCAAGCCATTGAAATTGAGACTGCGTCCAAACAAGGCAAAA 611
Query 1913 CTCAATCGCTTCCTAAGTCAGATGTTAGCCAACAGTCACACGTAACATTCCCTTTCCACC 1972
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 612 ATCAATCGCTTCCTAAGCCAGATGTTAGCGAACAGTCACACGTAACATTCCCTTTCCACC 671
Query 1973 TTCAGGTTGCCAAAGGACTGCAAAATGGTCTGACGTTTGGCAGTTTTGATTCCAACTTTG 2032
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 672 TTCAGGTTGCCAAAGGACTGCAAAATGGTCTGACGTTTGGCAGTTTTGATTCCAATTTTG 731
Query 2033 TGAAAGAGGTGTCTTCTAACAATGGTGCTAGTGGTGGAGATGACTCAAATTTTGAATCGT 2092
|||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||| || |
Sbjct 732 TGAAAGAGGTATCTTCTAGCAATGGTGCTAGTGGGGGATATGACTCAAATTTTGAGTCTT 791
Query 2093 CTGATGGGACAGGGGATGATGAGAAGGAACCTTCTCCCACTACCAATGGTATTCCTGGGG 2152
|| | ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||
Sbjct 792 CTCACGGGACAGGGGATGATGAGAGGGAATCTTCTCCCACTACCAATGGTATTACTGGGG 851
Query 2153 TTGCTTCTGCTAG 2165
||||||| |||||
Sbjct 852 TTGCTTCGGCTAG 864
> AT1G55810.1 | Symbols: UKL3 | uridine kinase-like 3 | chr1:20860609-20864266
FORWARD LENGTH=1768
Length=1768
Score = 833 bits (451), Expect = 0.0
Identities = 497/520 (96%), Gaps = 0/520 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCAAAATCGGCTGTGGATATAACAGAGACATCTTCAAAGGTTCATTTCTCAGGC 60
||||||||||| |||| |||| |||||| ||||||||| ||||||||||||||||||||
Sbjct 105 ATGGCTTCAAAGTCGGATGTGAATATAATAGAGACATCCTCAAAGGTTCATTTCTCAGGA 164
Query 61 TTTCATCAAATGGATGGTTTAGTTTCAACTAGACCAGAGCAAATGGCTGAGGAAGAAGAA 120
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 165 TTTCATCAAATGGATGGTTTAGCTTCAAATAGACCAGAGCAAATGGCTGAGGAAGAAGAA 224
Query 121 CATGGGCAACCTTTTGTGATCGGAGTTGCTGGAGGTGCAGCTTCCGGGAAAACAACTGTC 180
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 225 CATGGTCAACCTTTTGTGATCGGAGTTGCTGGAGGTGCAGCATCCGGGAAAACAACTGTC 284
Query 181 TGTGATATGATTATGCAGCAACTGCATGATCAGAGAGCTGTTGTTGTAAATCAGGATTCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 TGTGATATGATTATGCAGCAACTGCATGATCAGAGAGCTGTTGTTGTAAATCAGGATTCT 344
Query 241 TTCTACCATAATGTAAATGAAGAGGAGCTTGTAAGAGTTCATGATTACAATTTTGATCAT 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 345 TTCTACCATAATGTAAATGAAGTGGAGCTTGTAAGAGTTCATGATTACAATTTTGACCAT 404
Query 301 CCTGACGCTTTCGATACAGAGCAATTATTGTTTTCCATGGAGAAGTTAAGAAAAGGACAA 360
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 405 CCTGACGCTTTCGATACTGAGCAATTATTGTCTTCCATGGAGAAGTTAAGAAAAGGACAA 464
Query 361 GCAGTAGATATTCCCAACTATGACTTTAAAAGTTACAAGAACAATGTTTTTCCACCCAGA 420
|||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 465 GCAGTAGATATTCCTAATTATGACTTCAAAAGTTACAAGAACAATGTTTTTCCACCTAGA 524
Query 421 AGGGTGAATCCTTCTGATGTTATAATTCTGGAAGGGATACTCATTTTTCATGACCCTCGG 480
||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 525 AGGGTGAATCCTTCTGACGTTATAATTCTGGAAGGTATACTCATTTTCCATGACCCTCGG 584
Query 481 GTGCGCGATTTGATGAACATGAAGATATTTGTAGATGCAG 520
||||| ||||||||||||||||||||||||||||| ||||
Sbjct 585 GTGCGAGATTTGATGAACATGAAGATATTTGTAGACGCAG 624
Score = 438 bits (237), Expect = 1e-121
Identities = 262/274 (96%), Gaps = 1/274 (0%)
Strand=Plus/Plus
Query 1105 CTTATCTATGAGAAGCTACCCTCAGACATTTCAGAAAGGCATGTGCTTTTGCTAGACCCA 1164
|||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct 1200 CTTATCTACGAGAAGCTACCCTCAGACATTTCAGAAAGGCATGTGCTTTTACTGGATCCA 1259
Query 1165 ATCCTCGGGACAGGAAACTCAGCGGTGCAAGCGATAAGACTGCTTATAAGTAAAGGCGTG 1224
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1260 ATCCTCGGGACAGGAAACTCGGCGGTGCAAGCGATAAGACTGCTCATAAGTAAAGGCGTG 1319
Query 1225 CCTGAATCCAACATCATATTTCTCAATCTGATATCTGCACCTCAAGGAGTAAATGTGGTG 1284
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1320 CCTGAATCCAACATCATATTTCTCAATTTGATATCTGCACCTGAAGGAGTAAATGTGGTG 1379
Query 1285 TGCAAAAGGTTCCCAAGGATAAAGATAGTGACTTCAGAGATAGAACTCGGTTTAAACGAC 1344
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1380 TGCAAAAAGTTCCCAAGGATAAAGATTGTGACTTCAGAGATAGAACTCGGTTTAAACGAC 1439
Query 1345 GAGTTCCGAGTTGTTCCTGGTATGGGAGAGGTTT 1378
|||||||||||||||||||||||||| ||| |||
Sbjct 1440 GAGTTCCGAGTTGTTCCTGGTATGGGCGAG-TTT 1472
Score = 433 bits (234), Expect = 6e-120
Identities = 262/276 (95%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 583 GATGCCGATGTGCGTTTAGCGAGAAGGATTAAACGTGATACTGTTGAGAAGGATAGAGAT 642
||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||
Sbjct 624 GATGCCGATGTGCGTCTAGCGAGAAGGATAAAACGCGATACTGTTGAGAAGGGCAGAGAT 683
Query 643 ATCGCTACAGTTCTTGACCAGTACTCAAAGTTTGTGAAGCCAGCATTTGAGGATTTCATA 702
|| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 ATTGCCACTGTTCTTGACCAGTACTCAAAGTTTGTGAAGCCAGCATTTGAGGATTTCATA 743
Query 703 CTCCCAACAAAGAAATACGCAGATATAATAATTCCCCGAGGTGGTGATAATCATGTGGCT 762
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 744 CTCCCAACAAAGAAATACGCAGATATAATAATTCCCCGAGGTGGTGATAACCATGTTGCT 803
Query 763 ATTGATTTGATTGTGCAACATATCCGCACGAAGCTCGGTCAACATGATCTCTGTAAAATA 822
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 804 ATTGATTTGATTGTGCAACACATCCATACGAAGCTCGGTCAACATGATCTCTGTAAAATT 863
Query 823 TATCCAAATCTTTATGTTATTCAATCAACTTTTCAG 858
||||||||||||||||||||||||||||||||||||
Sbjct 864 TATCCAAATCTTTATGTTATTCAATCAACTTTTCAG 899
Score = 368 bits (199), Expect = 2e-100
Identities = 211/217 (97%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 858 GGTCGTTGAGCACGGCCTCGGACACCTTCCCTTTACAGAAAAGCAAGTGGTTACTCCCAC 917
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 983 GGTCGTTGAACATGGCCTCGGACACCTTCCCTTTACAGAAAAGCAAGTGGTTACTCCAAC 1042
Query 918 AGGATCTGTGTATTCGGGTGTGGACTTCTGTAAGAAACTGTGTGGTGTCTCAGTTATCAG 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043 AGGATCTGTGTATTCGGGTGTGGACTTCTGTAAGAAACTGTGTGGTGTCTCAGTTATCAG 1102
Query 978 AAGCGGTGAGAGTATGGAGAACGCTCTAAGAGCATGCTGCAAAGGCATCAAAATTGGGAA 1037
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1103 AAGCGGTGAGAGTATGGAGAACGCTCTTAGAGCATGCTGCAAAGGCATCAAAATTGGGAA 1162
Query 1038 GATTCTGATCCATAGAGAAGGCGACAACGGTCAACAG 1074
||||||||| ||||||||||||||||| |||||||||
Sbjct 1163 GATTCTGATTCATAGAGAAGGCGACAATGGTCAACAG 1199
> AT4G26510.1 | Symbols: UKL4 | uridine kinase-like 4 | chr4:13384062-13388290
FORWARD LENGTH=1896
Length=1896
Score = 283 bits (153), Expect = 6e-75
Identities = 238/279 (85%), Gaps = 6/279 (2%)
Strand=Plus/Plus
Query 583 GATGCCGATGTGCGTTTAGCGAGAAGGATTAAACGTGATACTGTTGAGAA-GGATAGAGA 641
||||| || || ||||| || |||||||| ||| | |||||||| ||||| || ||||||
Sbjct 645 GATGCTGACGTTCGTTTGGCAAGAAGGATAAAAAGAGATACTGTCGAGAATGG-TAGAGA 703
Query 642 TATC-GCTACAGTTCTTGACCAGTACTCAAAGTTTGTGAAGCCAGCATTTGAGGATTTCA 700
|||| || ||||| ||||||||||||||||||||||||||||| || ||||| || ||||
Sbjct 704 TATCGGC-ACAGTACTTGACCAGTACTCAAAGTTTGTGAAGCCTGCTTTTGATGACTTCA 762
Query 701 TACTCCCAACAAAGAAATACGCAGATATAATAATTCCC-CGAGGTGGTGATAATCATGTG 759
| || ||||| |||||||| |||||||| ||||| ||| || ||||| |||||||||||
Sbjct 763 TTCTTCCAACGAAGAAATATGCAGATATTATAAT-CCCTCGTGGTGGGGATAATCATGTA 821
Query 760 GCTATTGATTTGATTGTGCAACATATCCGCACGAAGCTCGGTCAACATGATCTCTGTAAA 819
|||||||| || |||||||||||||| |||| ||||| |||||||||||||||||||||
Sbjct 822 GCTATTGACTTAATTGTGCAACATATTTGCACCAAGCTGGGTCAACATGATCTCTGTAAA 881
Query 820 ATATATCCAAATCTTTATGTTATTCAATCAACTTTTCAG 858
|||||||| ||||| || ||||| || || || ||||||
Sbjct 882 ATATATCCTAATCTCTACGTTATACACTCGACATTTCAG 920
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154865353041
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5