BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315081 Length=2382 Score E Sequences producing significant alignments: (Bits) Value AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 2846 0.0 AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 2207 0.0 > AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:23463069-23466451 REVERSE LENGTH=2612 Length=2612 Score = 2846 bits (1541), Expect = 0.0 Identities = 1872/2028 (92%), Gaps = 38/2028 (2%) Strand=Plus/Plus Query 1 ATGTACTCGTTAATTCTCCGGGAACGATCTGGATCCTTCACAGGGTCCTTATGGAGCCAA 60 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || | Sbjct 1 ATGTACTCGTTAATTCTCCGGGAAAGATCTGGATCCATCACAGGGTCCTTATGGAACCGA 60 Query 61 ATCTTCTCTCGGAACATGGGTGGTGGTCCGAGAACTTTCCCTGGAGGGCTGAACAAGTGG 120 || | |||||||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 61 ATATCCTCTCGGAACATGGGTGGTGGTCCGAGAACCTTCCCTGGAGGACTAAACAAGTGG 120 Query 121 CAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAGTGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180 Query 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240 Query 241 CCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAGAGTCACGGACCAATGAGCCCGAAA 300 |||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 241 CCAGATTCTGGTGAGAAAACGGCGAAATCGAAGCAGAGTCATGGACCAATGAGCCCGAAA 300 Query 301 GAACATATCAAAACTTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTGTGGAAC 360 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 301 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTTTGGAAC 360 Query 361 GAGAACGATGGGCCGGTGAAGGAATCAGATGATGGGTCGGGATTAACTCGTAGGGATAAT 420 ||||||||||| ||||||||| |||||||| | ||||| || | || | || | | Sbjct 361 GAGAACGATGGTCCGGTGAAGAAATCAGATCAAGGGTC--GA--GA-TC--A-GG-T--T 409 Query 421 GGACGGTCAGGTTCGAATTCGATTGTTTCTTCTTCTAATTCGTCTATTGATGTGAGGAAG 480 ||| | |||| ||| || |||| ||||||||||| |||||||||||||| || Sbjct 410 ---CGG--A--TTCG-ATT-GA----TTCTACTTCTAATTCGCCTATTGATGTGAGG-AG 455 Query 481 -TTAGTTAGTGGGACATGTTATTCAATGGGTAATAGTCGGGTTTTCGATCGTAGTAGGAG 539 |||||| || ||||||| |||| |||||||| | ||| ||||||| | |||||||||| Sbjct 456 ATTAGTTTCTGCGACATGTGATTCTATGGGTAAAAATCGTGTTTTCGGTAGTAGTAGGAG 515 Query 540 AGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 599 |||||||||||| | | | || ||||||||||||||||||||||||||||||||||||| Sbjct 516 AGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 569 Query 600 AGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTTTTCTCTTAAATTTGCGGG 659 |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || Sbjct 570 AGATGACTTTGATGCTAAAAAGCTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCTGG 629 Query 660 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGACGGAGTTATAAGGAACAAAGGTTT 719 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 630 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 689 Query 720 GTTTGGTCGGAGGAAGTTTAGGAAGAATGATAGTTCAACTGAAGAGGATTCAGAGGAAGA 779 |||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 690 GTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTGAAGAGGATTCAGATGAAGA 749 Query 780 AGGCGAAGAGGGAAAGATGATAGGTTGGATGGATTTGAGGAAAACAGGAAGCAGTGCGTC 839 |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 750 AGGCGATGAGGGAAAGATGATAGGTTGGATGGATATGAGGAAAACGGGAAGCAGTGCGTC 809 Query 840 GTTAGGAAACCACGATATCAAACTGACGAAAAGAGTGAATCGTAATGTCACGGACGAAGA 899 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 810 GTTAGGGAACCACGATATCAAGCTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAGA 869 Query 900 GCTATATCCTCCGTTAGATATTAATACAGTCAGAGAAGATCTCAGTAAAAGAAAATCTGT 959 ||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 870 GCTTTATCCTCCTTTGGATATTAATACAGTTAGAGAAGATCTCAGTAAAAGAAAATCTGT 929 Query 960 GGATAATGTAATAAAGGAGAACCGAGAGCCTCATGACTCGTTTTACAGTAG-GAAAAGAT 1018 |||||||||||| ||||||| | |||||||||||||||| |||||||| | ||||||| Sbjct 930 GGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACTCGATTTACAGT-GCAAAAAGAT 988 Query 1019 TTGATGAGTCTAGTATATCTCCTTTGACTCTCAAGGCACTTTCCGCGTCTGGCATTGTTA 1078 ||||||||||| |||||||||||||||| || ||||||||||| |||||||||||| ||| Sbjct 989 TTGATGAGTCTTGTATATCTCCTTTGACGCTAAAGGCACTTTCTGCGTCTGGCATTCTTA 1048 Query 1079 ATATGACTAGAGTACAAGATGCCACTCTCTCTGAGTGCCTCGATGGTAAAGATGCGTTAG 1138 | |||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||| Sbjct 1049 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGACGGTAAAGATGCATTAG 1108 Query 1139 TCAAAGCCAAAACCGGGACGGGGAAA-AGCATGGCCTTTTTGCTTCCTGCAATTGAAACA 1197 ||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||| Sbjct 1109 TCAAAGCCAAAACTGGGAC-GGGAAAGAGCATGGCGTTTTTGCTTCCTGCAATTGAAACA 1167 Query 1198 GTTCTGAAAGCTATGAACAACGGTAACAGTGTTCACAAAGTTCCTCCAATATTTGCTCTT 1257 ||||||||||||||||||| |||||| | ||| |||||||| |||| || ||||||||| Sbjct 1168 GTTCTGAAAGCTATGAACAGCGGTAAGGGCGTTAACAAAGTTGCTCCGATTTTTGCTCTT 1227 Query 1258 ATCCTCTGTCCCACAAGAGAACTTGCGAGTCAGATTTCTGCAGAGGGCATGGCTCTGCTC 1317 |||||||||||||||||||||||||| || ||||| |||||||||||| |||||| ||| Sbjct 1228 ATCCTCTGTCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTACTC 1287 Query 1318 AAATACCACGACGGTATCGGTGTTCAGACTTTAATTGGAGGTACCCGCTTCAAACTTGAT 1377 |||| ||| ||||| || |||||||||||| ||||||| ||||| ||||||||||||||| Sbjct 1288 AAATTCCATGACGGGATTGGTGTTCAGACTCTAATTGGTGGTACACGCTTCAAACTTGAT 1347 Query 1378 CAGCAACGCCTAGAATCCGAGCCATGCCAGATACTAATTGCAACTCCAGGAAGACTCTTG 1437 || |||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||| Sbjct 1348 CAACAACGCCTAGAATCTGAGCCATGTCAGATACTAATAGCAACTCCGGGAAGACTCTTG 1407 Query 1438 GATCATATAGAGAATAAGTCTGGCTTAACATCACGTTTGATGGCGCTTAAATTGTTTATA 1497 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1408 GATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGATGGCGCTTAAATTGTTTATA 1467 Query 1498 GTTGATGAGGCTGATCTTTTACTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATA 1557 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1468 GTTGACGAGGCTGACCTTTTGCTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATA 1527 Query 1558 GATTGTTTGCCTCGTCAAAGACAATCTCTTCTCTTTTCTGCAACCATCCCAAAAGAGGTC 1617 ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 1528 GATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCTGCAACCATTCCGAAAGAGGTC 1587 Query 1618 CGTCGAGTCTCGCAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGTCTT 1677 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1588 CGTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGGCTC 1647 Query 1678 GGTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTATTGTTGCTCCTCACGATTCT 1737 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| Sbjct 1648 GGTTGTGTAGAGACTCATGATAAGGTGAGGCAATCTTGTATTGTTGCTCCACACGAATCT 1707 Query 1738 CATTTCCACTTAGTACCTCATCTACTAAAAGAGCACATCAGCAACACGCTTGATTATAAG 1797 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct 1708 CATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTATAAG 1767 Query 1798 ATAATAGTCTTCTGCTCAACTGGTATGGTAACATCACTGATGTATACTCTGCTCCGGGAA 1857 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1768 ATAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTACTCCGGGAA 1827 Query 1858 ATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTTCATAGAACACGTGTA 1917 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1828 ATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTA 1887 Query 1918 TCAGACGAGTTTAAGGAATCGAAA-AGACTGATTCTTGTCACATCTGATGTATCTGCTCG 1976 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 1888 TCAGACGAGTTTAAGGAATC-AAATAGACTGATTCTTGTCACATCTGATGTATCTGCTCG 1946 Query 1977 TGGAATGAACTATCCAGATGTTACTTTGGTTATACAGGTGGGTATACC 2024 ||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1947 TGGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACC 1994 Score = 527 bits (285), Expect = 2e-148 Identities = 314/328 (96%), Gaps = 1/328 (0%) Strand=Plus/Plus Query 2056 GATTGC-CCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCTCTTGAACCAAT 2114 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2070 GATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCACTTGAACCAAT 2129 Query 2115 TCCAGTTCCAGATCTTGATTCAAGAGTTAATCTTCAGGTTGATCAGTCAATGGCTAAGAT 2174 ||||| ||| ||||||||||||| |||||| | ||||||||||||||| ||||||||||| Sbjct 2130 TCCAGCTCCGGATCTTGATTCAATAGTTAAACATCAGGTTGATCAGTCGATGGCTAAGAT 2189 Query 2175 TGATACAAGTATTAAAGAAGCAGCGTACCATGCTTGGCTCGGTTATTACAACTCGGTTCG 2234 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2190 TGATACAAGTATCAAAGAAGCAGCGTACCATGCATGGCTCGGTTATTACAACTCGGTTCG 2249 Query 2235 AGAAACAGGTAGAGACAAAACCACGTTGGCCGAGTTAGCCAACCGGTTTTGCCATTCTAT 2294 |||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 2250 AGAAACCGGTAGAGACAAAACCACGTTAGCCGAGTTAGCTAATCGGTTTTGCCATTCTAT 2309 Query 2295 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAAGG 2354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2310 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAAGG 2369 Query 2355 TATTTCTGGTATTCCAATCCGAAAATAA 2382 |||||||||||||||||||||||||||| Sbjct 2370 TATTTCTGGTATTCCAATCCGAAAATAA 2397 > AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr2:3576465-3580525 FORWARD LENGTH=2685 Length=2685 Score = 2207 bits (1195), Expect = 0.0 Identities = 1447/1568 (92%), Gaps = 20/1568 (1%) Strand=Plus/Plus Query 464 CTATTGATGTGAGGAAG-TTAGTTAGTGGGACATGTTATTCAATGGGT-AATAGTCGGGT 521 |||||||||||||| || |||||| || ||||||| ||||||||||| || | ||| || Sbjct 599 CTATTGATGTGAGG-AGATTAGTTTCTGCGACATGTGATTCAATGGGTAAACA-TCGTGT 656 Query 522 TTTCGATCGTAGTAGGAGAGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATGA 581 ||| ||| |||||||||||||||||||||| | | | || ||||||||||||||||||| Sbjct 657 TTTGGATAGTAGTAGGAGAGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATGA 710 Query 582 GAGTTCTTGTGATGAAGGAGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTT 641 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 711 GAGTTCTTGTGATGAAGGAGATGACGTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTT 770 Query 642 TTCTCTTAAATTTGCGGGTACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGACGGAGT 701 ||||| ||||||| | |||||||||||||||||||||||||||| |||||||| ||||| Sbjct 771 TTCTCCTAAATTTTCTGGTACCAAGGAGAAAGTGAAGAGCTCGACGAGTGTTGTTGGAGT 830 Query 702 TATAAGGAACAAAGGTTTGTTTGGTCGGAGGAAGTTTAGGAAGAATGATAGTTCAACTGA 761 |||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct 831 TATAAGGAACAAAGGTTTGTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTGA 890 Query 762 AGAGGATTCAGAGGAAGAAGGCGAA-GAGGGAAAGATGATAGGTTGGATGGATTTGAGGA 820 |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 891 AGAGGATTCAGATGAAGAAGGC-AATGAGGGAAAGATGATAGGTTGGATGGATTTGAGGA 949 Query 821 AAACAGGAAGCAGTGCGTCGTTAGGAAACCACGATATCAAACTGACGAAAAGAGTGAATC 880 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 950 AAACAGGAAGCAGTGCGTCGTTAGGAAACCACGATATCAAGCTGACGAAAAGAGTGAATC 1009 Query 881 GTAATGTCACGGACGAAGAGCTATATCCTCCGTTAGATATTAATACAGTCAGAGAAGATC 940 |||||||||| ||||||||||| |||||||| || |||||||||| ||| |||||||||| Sbjct 1010 GTAATGTCACAGACGAAGAGCTTTATCCTCCTTTGGATATTAATAGAGTTAGAGAAGATC 1069 Query 941 TCAGTAAAAGAA-AATCTGTGGATAATGTAATAAAGGAGAACCGAGAGCCTCATGACTCG 999 ||||||||| || ||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct 1070 TCAGTAAAA-AACAATCTGTGGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACTCG 1128 Query 1000 TTTTACAGTAGGAAAA-GATTTGATGAGTCTAGTATATCTCCTTTGACTCTCAAGGCACT 1058 |||||||| | |||| |||||||||||||| |||||||||||||||| || ||||| || Sbjct 1129 ATTTACAGT-GCAAAAAGATTTGATGAGTCTTGTATATCTCCTTTGACGCTTAAGGCGCT 1187 Query 1059 TTCCGCGTCTGGCATTGTTAATATGACTAGAGTACAAGATGCCACTCTCTCTGAGTGCCT 1118 ||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct 1188 TTCTGCGTCTGGCATTGTTAAGATGACTAGAGTGCAGGATGCCACTCTCTCTGAGTGCCT 1247 Query 1119 CGATGGTAAAGATGCGTTAGTCAAAGCCAAAACCGGGACGGGGAAA-AGCATGGCCTTTT 1177 || ||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||| Sbjct 1248 AGACGGTAAAGATGCATTAGTCAAAGCCAAAACCGGGACGGG-AAAGAGCATGGCGTTTT 1306 Query 1178 TGCTTCCTGCAATTGAAACAGTTCTGAAAGCTATGAACAACGGTAACAGTGTTCACAAAG 1237 ||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| Sbjct 1307 TGCTTCCTGCAATTGAAACAGTTCTGAAAGCTATGAACAGCGGTAAGGGCGTTCACAAAG 1366 Query 1238 TTCCTCCAATATTTGCTCTTATCCTCTGTCCCACAAGAGAACTTGCGAGTCAGATTTCTG 1297 || |||| || |||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct 1367 TTGCTCCGATTTTTGTTCTTATCCTCTGTCCTACAAGAGAACTTGCAAGCCAGATCGCTG 1426 Query 1298 CAGAGGGCATGGCTCTGCTCAAATACCACGACGGTATCGGTGTTCAGACTTTAATTGGAG 1357 ||||||||| ||||||||||||| |||| ||||| ||||||||||||||| ||||||| | Sbjct 1427 CAGAGGGCAAGGCTCTGCTCAAAAACCATGACGGGATCGGTGTTCAGACTCTAATTGGTG 1486 Query 1358 GTACCCGCTTCAAACTTGATCAGCAACGCCTAGAATCCGAGCCATGCCAGATACTAATTG 1417 |||| ||||||| ||||||||| |||||||||||||| |||||||||||||||||||| | Sbjct 1487 GTACGCGCTTCAGACTTGATCAACAACGCCTAGAATCTGAGCCATGCCAGATACTAATAG 1546 Query 1418 CAACTCCAGGAAGACTCTTGGATCATATAGAGAATAAGTCTGGCTTAACATCACGTTTGA 1477 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1547 CAACTCCGGGAAGACTCTTGGATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGA 1606 Query 1478 TGGCGCTTAAATTGTTTATAGTTGATGAGGCTGATCTTTTACTAGACTTAGGATTCAGGA 1537 |||| |||||||||||||||||||| ||||||||||| || |||||||||||||||| || Sbjct 1607 TGGCCCTTAAATTGTTTATAGTTGACGAGGCTGATCTATTGCTAGACTTAGGATTCAAGA 1666 Query 1538 GAGATGTCGAAAAAATCATAGATTGTTTGCCTCGTCAAAGACAATCTCTTCTCTTTTCTG 1597 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 1667 GAGATGTTGAAAAGATCATAGATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCCG 1726 Query 1598 CAACCATCCCAAAAGAGGTCCGTCGAGTCTCGCAGCTTGTTTTGAAAAGGGATCACTCTT 1657 ||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||| Sbjct 1727 CAACCATTCCAAAAGAGGTCCGTCGAGTCTCACAACTTGTTTTAAAAAGGGATCACTCTT 1786 Query 1658 ATATCGACACAATCGGTCTTGGTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTA 1717 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct 1787 ATATCGACACAATCGGGCTCGGTTGTGTAGAAACTCATGATAAGGTGAAGCAATCTTGTA 1846 Query 1718 TTGTTGCTCCTCACGATTCTCATTTCCACTTAGTACCTCATCTACTAAAAGAGCACATCA 1777 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1847 TTGTTGCTCCACACGAATCTCATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCA 1906 Query 1778 GCAACACGCTTGATTATAAGATAATAGTCTTCTGCTCAACTGGTATGGTAACATCACTGA 1837 ||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1907 ACAACATGCCTGATTATAAGATAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGA 1966 Query 1838 TGTATACTCTGCTCCGGGAAATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTC 1897 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1967 TGTACACTCTGCTCCGGGAAATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTC 2026 Query 1898 AGCTTCATAGAACACGTGTATCAGACGAGTTTAAGGAATCGAAA-AGACTGATTCTTGTC 1956 |||| ||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct 2027 AGCTCCATAGAACATGTGTATCAGACGAGTTTAAGGAATC-AAATAGACTTATTCTTGTC 2085 Query 1957 ACATCTGATGTATCTGCTCGTGGAATGAACTATCCAGATGTTACTTTGGTTATACAGGTG 2016 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2086 ACATCTGATGTATCTGCTCGTGGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTC 2145 Query 2017 GGTATACC 2024 |||||||| Sbjct 2146 GGTATACC 2153 Score = 544 bits (294), Expect = 2e-153 Identities = 317/328 (97%), Gaps = 1/328 (0%) Strand=Plus/Plus Query 2056 GATTGC-CCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCTCTTGAACCAAT 2114 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2229 GATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTACCTCTTGAACCAAT 2288 Query 2115 TCCAGTTCCAGATCTTGATTCAAGAGTTAATCTTCAGGTTGATCAGTCAATGGCTAAGAT 2174 ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 2289 TCCAGCTCCAGATCTTGATTCAAGAGTTAAACATCAGGTTGATCAGTCAATGGCTAAGAT 2348 Query 2175 TGATACAAGTATTAAAGAAGCAGCGTACCATGCTTGGCTCGGTTATTACAACTCGGTTCG 2234 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2349 TGATACAAGTATCAAAGAAGCAGCGTACCATGCATGGCTCGGTTATTACAACTCGGTTCG 2408 Query 2235 AGAAACAGGTAGAGACAAAACCACGTTGGCCGAGTTAGCCAACCGGTTTTGCCATTCTAT 2294 |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 2409 AGAAACCGGTAGAGACAAAACCACGTTGGCCGAGTTAGCTAATCGGTTTTGCCATTCTAT 2468 Query 2295 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAAGG 2354 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2469 CGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTTAAAGG 2528 Query 2355 TATTTCTGGTATTCCAATCCGAAAATAA 2382 |||||||||||||||||||||||||||| Sbjct 2529 TATTTCTGGTATTCCAATCCGAAAATAA 2556 Score = 538 bits (291), Expect = 9e-152 Identities = 337/360 (94%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 44 GGTCCTTATGGAGCCAAATCTTCTCTCGGAACATGGGTGGTGGTCCGAGAACTTTCCCTG 103 |||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 212 GGTCCTTATGGAACCGAATATTCTCTCGGAACATGGGTGGTGGTCCGAGAACTTTCCCTG 271 Query 104 GAGGGCTGAACAAGTGGCAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGA 163 |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 272 GAGGACTAAACAAGTGGCAATGGAAACGTATGCACGAGAAGAAAGCAAGAGAGAAAGAGA 331 Query 164 ACAAGCTCTTGGATCAAGAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAG 223 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 332 ACAAGCTCTTGGATCAAGAGAAACAGCTTTACGAAGCTCGAATTCGGACCGAGATCCGAG 391 Query 224 CTAAAATGTGGGGAAATCCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAGAGTCACG 283 ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| | Sbjct 392 CTAAAATGTGGGGTCATCCAGATTCCGGTGAGAAAACGGCGAAATTGAAGCAGAGTCATG 451 Query 284 GACCAATGAGCCCGAAAGAACATATCAAAACTTTGGCTGATCGGTTTATGAAAGCTGGAG 343 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 452 GACCAATGAGCCCGAAAGAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGTG 511 Query 344 CAGAGGATTTGTGGAACGAGAACGATGGGCCGGTGAAGGAATCAGATGATGGGTCGGGAT 403 |||| |||||||||||||| |||||||| ||||||||| ||| ||| | |||||| ||| Sbjct 512 CAGATGATTTGTGGAACGATAACGATGGTCCGGTGAAGAAATTTGATCAAGGGTCGAGAT 571 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 118272484020 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5