BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg315086

Length=444
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G63220.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB...   737    0.0  


> AT1G63220.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB 
domain) family protein | chr1:23448919-23450452 FORWARD LENGTH=750
Length=750

 Score =  737 bits (399),  Expect = 0.0
 Identities = 429/444 (97%), Gaps = 0/444 (0%)
 Strand=Plus/Plus

Query  1    ATGCCTCATGGAACTCTTGAAGTTGTTCTTGTCAGCGCCAAAGGTCTCGAGGACGCAGAT  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  99   ATGCCTCATGGAACTCTTGAAGTTGTTCTTGTCAGCGCCAAAGGTCTCGAGGACGCAGAT  158

Query  61   TTTCTGAATAACATGGATCCTTATGTGCAACTCACTTGTCGGACTCAAGATCAGAAGAGC  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  159  TTTCTGAATAACATGGATCCTTATGTGCAACTCACTTGTCGGACTCAAGATCAGAAGAGC  218

Query  121  AGTGTTGCAGAAGGGATGGGCACTACTCCTGAATGGAATGAGACATTTATCTTCACTGTC  180
            |  ||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct  219  AACGTTGCAGAAGGAATGGGGACAACTCCGGAATGGAATGAGACATTTATCTTCACTGTC  278

Query  181  TCTGAAGGAACTACAGAGTTAAAAGCGAAAATCTTCGACAAAGATGTCGGCACTGAGGAT  240
            |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct  279  TCTGAAGGAACTACAGAGTTAAAAGCGAAAATCTTCGACAAAGATGTCGGTACAGAGGAT  338

Query  241  GATGCGGTTGGTGAAGCAACTATTCCGTTGGAGCCGGTTTTCGTGGAAGGAAGTATTCCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  339  GATGCGGTTGGTGAAGCAACTATTCCGTTGGAGCCGGTTTTCGTGGAAGGAAGTATTCCA  398

Query  301  CCAACTGCATACAATGTGGTGAAAGATGAAGAGTACAAAGGCGAGATTTGGATCGCGCTC  360
            ||||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||
Sbjct  399  CCAACTGCATACAATGTGGTGAAAGATGAAGAGTACAAAGGAGAGATTTGGGTGGCTCTC  458

Query  361  TCCTTCAAGCCCTCGGAAAACCGAAGCAGGGGTATCGACGAAGAGTCCTATGGAGGCTGG  420
            ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct  459  TCCTTCAAGCCCTCGGAAAACCGAAGCAGGGGTATGGACGAGGAGTCCTATGGGGGCTGG  518

Query  421  AAAAACTCTGAAGCATCATACTAA  444
            ||||||||||||||||||||||||
Sbjct  519  AAAAACTCTGAAGCATCATACTAA  542



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21112454580


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5