BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315176
Length=3144
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1... 2483 0.0
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosp... 603 4e-171
> AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:22962340-22968920
REVERSE LENGTH=3157
Length=3157
Score = 2483 bits (1344), Expect = 0.0
Identities = 1680/1837 (91%), Gaps = 43/1837 (2%)
Strand=Plus/Plus
Query 1313 GTTCATTTGGAACTCCAATTTCTGGTTTACTGATACTTCATTGGGAAAAAACACTTGCAG 1372
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1310 GTTCATTTGGAACTCCAATTTCTGGTTTACTGATACTTCATTGGGGAAAAACACTTGCAG 1369
Query 1373 GTGACAGGGTAAGATTCATAGGTGATGAGTTGTGTTCGGGGCTACCTACCTCAAGGGGAC 1432
| ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct 1370 GGGACAGGGTAAGATTCTTCGGTGATGAGTTGTGTCCGGGGCTACCTACCTCAAGGGGAC 1429
Query 1433 CACCTTATGGGGTTAGAGGGAAAGTACTTTTAGTATTTGATGAGAATCCTTCAGCTAAAG 1492
||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1430 CACCTTATGGGTTTATAGGGAAAGTACTGTTAGTATTTGATGAGAATCCTTCAGCTAAAG 1489
Query 1493 TGGGTGTTAGATTTGAGAATCCAGTAGTTGATGGCGTTGATCTTGGTGAACTGTGTGAAA 1552
|||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||
Sbjct 1490 TGGGTGTTAGATTTGAGAATCCAGTACCTGATGGAGTTGATCTTGGTCAACTGTGTGAAA 1549
Query 1553 TGGGACATGGGTTCTTCTGCAGTGCTACTGATCTTCAGTTTGAAAGCTCGGGTTCTGAGG 1612
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct 1550 TGGGACATGGGTTCTTCTGCAGTGCTACTGATCTTCAGTTCGAAAGCTCGGCATCTGACG 1609
Query 1613 ATCTAAATGAATTACTTGTTAGCCAA-TTGTTTGAGGTTGCCCATGATGAGAGCAGAACT 1671
||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct 1610 ATCTAAATGAATTACTTGTTA-CCAAATTGTTTGAGGTTGCCCATGATCAGAGCAGAACT 1668
Query 1672 TGTCCGGTTATTCTATTCCTGAAAGATGATGAGGAAGT-TTTTGTTGGAAATTCCGATTT 1730
|||||||||||| |||| ||||||||| |||| || | |||||||||||||||| ||||
Sbjct 1669 TGTCCGGTTATTATATTTTTGAAAGATGCTGAGAAA-TATTTTGTTGGAAATTCCCATTT 1727
Query 1731 CTGCTCTGCATTCAAAAGCAAAGTTGAAGAAATCCCAGATAACGTAATTGTGATCTGTTC 1790
||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||
Sbjct 1728 TTGCTCTGCATTCAAAAGCAAACTTGAAGTTATCTCAGATAACCTAATTGTGATCTGTTC 1787
Query 1791 ACAGACACACTCTGATAATCACAAGGAGAAGGATATTGGACTTCTAACGAATCTCTTTGG 1850
|||||||| |||||||||| ||||||||||| |||||||| ||||||| |||||||||
Sbjct 1788 CCAGACACATTCTGATAATCCCAAGGAGAAGGGTATTGGACGTCTAACGGATCTCTTTGT 1847
Query 1851 GAATAAAGTTACCATTTACGA-GCCACAGGGTGAGGATCTTCTTAAATCTTGGAAGTATC 1909
|||||||||||| || ||| | ||||||||||||||| ||||||||||||||||||||||
Sbjct 1848 GAATAAAGTTACTATATAC-ATGCCACAGGGTGAGGAACTTCTTAAATCTTGGAAGTATC 1906
Query 1910 ATTTGGATCGTGATGCTGAGACTTTGAAAACAAAGGCTAATCGCAATCACTTGCGCATGG 1969
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1907 ATTTGGATCGTGATGCTGAGACTTTGAAAATGAAGGCTAATTACAATCACTTGCGCATGG 1966
Query 1970 TGTTGGGACGATTTGGTATAGATTGTGAAGGCATTGAGACGCTGTGCATGAAGGATCTCA 2029
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1967 TGTTGGGACGATGTGGTATAGAGTGTGAAGGCATTGAGACGCTGTGCATGAAGGATCTCA 2026
Query 2030 CACTTCAAAGTGACAGTGCAGAAAAGATCATTGGATGGGCTCTTAGTCACCATATAAAGT 2089
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2027 CACTTCGAAGAGACAGTGCAGAAAAGATCATTGGATGGGCTCTTAGTCACCATATAAAGT 2086
Query 2090 GTAATCCTGATGCTGATCCAGATGTTAGTGTCACTTTGTCTCTTGATAGCTTAAAATGTG 2149
|||||||| |||||||||||||||||| || | |||||||||||| |||||||||||||
Sbjct 2087 CTAATCCTGGTGCTGATCCAGATGTTAGGGTTATTTTGTCTCTTGAGAGCTTAAAATGTG 2146
Query 2150 GAATAGAACTCTTTCAGGCTCTTGTAAATGAAACTAAGAGCCCGAAGAAGTCTCTCAAGG 2209
||||||||||||| || ||| || | |||||| | | ||||||||||
Sbjct 2147 GAATAGAACTCTT---GGAAATTG-AA-T----CTAAGA-----A-G---TCTCTCAAGG 2188
Query 2210 ACATTGTGACAGAAGTTGAT-TTTGAGATAAGTGATGTTATTCCGCCCAGTGACATTGGT 2268
|||||||||||||| | | ||||| ||||||||| |||||||||||||||| ||||||
Sbjct 2189 ACATTGTGACAGAAAAT-ACGTTTGAAATAAGTGATATTATTCCGCCCAGTGAAATTGGT 2247
Query 2269 GTTACATTTGATGACATTGGGGCACTTGAGAATGTCAAAGACACTTTAAAGGAATTGGTT 2328
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2248 GTTACATTCGATGACATTGGGGCACTTGAGAATGTCAAAGACACTTTAAAGGAACTGGTT 2307
Query 2329 ATGCTTCCTTTACAACGGCCTGAACTTTTCTGCCAAGGG-CAATTAACAACGCCTTGTAA 2387
||||||||||| ||| ||||||||||||||||| ||||| |||||||||| |||||||||
Sbjct 2308 ATGCTTCCTTTTCAATGGCCTGAACTTTTCTGC-AAGGGGCAATTAACAAAGCCTTGTAA 2366
Query 2388 AGGAATTCTCTTATTTGGACCTGCTGGAACTGGAAAGACCATGCTTGCAAAGGCATTGGC 2447
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2367 CGGAATTCTCTTATTTGGACCTTCTGGAACTGGAAAGACCATGCTTGCAAAGGCAGTGGC 2426
Query 2448 AACGGAAGCTGGTGCTAATTTGATCAACATCTCAATGTCAAGGTGGTTTAGTGAGGGTGA 2507
|||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct 2427 AACGGAAGCTGGTGCTAACCTCATCAACATGTCAATGTCAAGGTGGTTTAGTGAGGGTGA 2486
Query 2508 GAAATATGTCAAAGCTGTCTTTTCGTTGGCCAGTAAAATCTCCCCTAGCATTATCTTTAT 2567
|||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |
Sbjct 2487 GAAATATGTCAAAGCTGTCTTTTCGTTGGCTAGTAAAATTTCCCCAAGCATTATCTTTTT 2546
Query 2568 GGACAAGGTGGACAGCATGCTAT-TCC--A-AGATCAGAAGACGGCAAATGAGTTCATAA 2623
|||| ||||||| ||||||||| || | || | ||||||| ||||||||||||||
Sbjct 2547 GGACGAGGTGGAAAGCATGCTACATCGGTACAGG-CTGAAGACGAAAAATGAGTTCATAA 2605
Query 2624 TAAATTGGGACGGTCTGAGGACAAACGAAAAGGAACATGTTCTGGTTCTTGCATCCACAA 2683
||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct 2606 TAAATTGGGACGGTCTGAGGACAAATGAAAAGGAACGTGTTCTGGTTCTTGCAGCCACAA 2665
Query 2684 ATAGACCTTTTGACCTTGATGAGGCTGTCATTAGAAGGTTGCCTCATAGGTTGATGGTGG 2743
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2666 ATAGACCTTTTGACCTTGACGAGGCTGTCATTAGAAGGTTGCCTCATAGGTTGATGGTGG 2725
Query 2744 GACTACCAGATGCTC-TGAGTAGAGCAAAGATATTGAAGGTTATACTTGCAAAAGAAGAC 2802
||||||||||||||| | |||||| |||||||||||||||| |||||| |||||||||||
Sbjct 2726 GACTACCAGATGCTCGT-AGTAGATCAAAGATATTGAAGGTGATACTTTCAAAAGAAGAC 2784
Query 2803 TTGTCCCCTGATTTTGATATCGATGCAG-TTGCTAGTATGACTAATGGATATTCTGGAAA 2861
|||||||||||||| ||||| |||| || ||||||||||||| |||||||||||||||||
Sbjct 2785 TTGTCCCCTGATTTCGATATTGATG-AGGTTGCTAGTATGACAAATGGATATTCTGGAAA 2843
Query 2862 CGATCTTAAGAATCTATGTGTTACTGCTGCCCGCTGTCGAATCA-AGGAGATAGTGGAGA 2920
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct 2844 CGATCTTAAGAATCTATGTGTTACTGCTGCCCGCCGTCGAATCATAG-AGATAGTGGAGA 2902
Query 2921 AGGAAAAAAGTGAGCGAGATGCTGCTCTGGCTGAAGGAAGAGTTCCTCCAGCACGAAGTG 2980
|||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct 2903 AGGAAAAAAGTGAGCGAGATGCTGCTGTGGCTGAAGGCAGAGTTCCTCCAGCTGGAAGTG 2962
Query 2981 GAAGTTCTGATATCCGAGCTTTAAACATAGAGGATTTCAGAAACGCACTTGAGCTGGTGA 3040
|| |||||||| |||||| |||||| || |||||||||||||||||||| ||||||||||
Sbjct 2963 GAGGTTCTGATCTCCGAGTTTTAAAAATGGAGGATTTCAGAAACGCACTCGAGCTGGTGA 3022
Query 3041 GTATGAGCGTCTCATCAGAGTCTGTGAACATGACAGCGCTTCGAAAATGGAACGAACATT 3100
|||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||| | |
Sbjct 3023 GTATGAGCATCTCATCAAAGTCTGTCAACATGACAGCGCTTCGACAATGGAACGAAGACT 3082
Query 3101 ACGGGGAAGGTGGATCCAGTAAATGGAACGAA-CATT 3136
||||||||||||||||||| || |||| ||| ||||
Sbjct 3083 ACGGGGAAGGTGGATCCAG-AA--GGAATGAATCATT 3116
Score = 841 bits (455), Expect = 0.0
Identities = 651/739 (88%), Gaps = 39/739 (5%)
Strand=Plus/Plus
Query 558 GATGTCTAAAGTTGCAGTCAAATCTGGTGGGGAACAGGTTCCTGCAGCAAAATTTCTACA 617
||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 582 GATGTCTAAAGTTACAGTCATATCTGGTGGGGAACAGGTTCCTGCAGGAAAATTTCTACA 641
Query 618 GTTAGAGAGAGAGGCAAGAGATCCATCAACTGTTTCGATTTTGGCATCGCTTGAAATCTC 677
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 642 GTTAGAGAGAGAGGCAAGAGATCCATCAAGAGTTTCGATGTTGGCATCGCTTGAAATCTC 701
Query 678 GCGTGAGAATCCTGCTACTTCTGGCGTCCAAGAAGGC---GCA-GA-GCTTGAAT-TTGA 731
|||||||||||||||||||||||| |||||||||||| | | || || | || |
Sbjct 702 GCGTGAGAATCCTGCTACTTCTGGGGTCCAAGAAGGCGTGGAAGGATATTTTCCTGTTAA 761
Query 732 CAATCAAAGTAATAAAGCTGCAGACAGTGGAGTAGTCAGCAGCCACAACCAAGATTCCAA 791
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 762 CAATCAAAGTAATAAAGCTGCAGACAGTGGAGTAGTCATCAGCCACAACCAAGATTCCAA 821
Query 792 AAT---G------GA-GA--AAAACGAGGTGAC----AA--GGAGGCCAGAACAAGCTGC 833
||| | || || ||||||||||||| || ||||| || ||||||||||
Sbjct 822 AATGGAGATATTAGATGAGGAAAACGAGGTGACAAGAAACCGGAGGGCACAACAAGCTGC 881
Query 834 -AAGATTCAGGAAATATATTCAAGCTGGAATTGTTGAAGGCGAAAGATTGAAATTTTCAT 892
||| |||||| ||||||||| |||||| |||||||| ||| |||||||| |||||||||
Sbjct 882 AAAG-TTCAGGGAATATATTCGAGCTGGTATTGTTGACGGCAAAAGATTGGAATTTTCAT 940
Query 893 TCGAAAATTTTCCTTATTATTTGAGTGAGAATACAAAGAACGTCTTACTAGCTGTTTCAC 952
||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct 941 TCGAAAATTTTCCTTATTATTTGAGTGAGCATACAAAGTATGTCTTACTAGCTGTTTCAG 1000
Query 953 ATATACATCTGAACAAAGA-GAATACAGGATATGCCCTATATGCCTCCGACTTTACCACT 1011
|||| |||||||| |||| ||||| ||||||||||| |||||| |||||||| |||| |
Sbjct 1001 ATATGCATCTGAA-TAAGATGAATATAGGATATGCCCCATATGCATCCGACTTGACCATT 1059
Query 1012 TTGAATCCAAGGATATTGCTTTCTGGTCCTGCAGGAACTGAAATATACCAAGAGATATTA 1071
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1060 TTGAATCCAAGGATATTGCTTTCTGGTCCTGCAGGGTCTGAAATATACCAAGAGATATTA 1119
Query 1072 GCTAAAGCACTTGCCAAAT-ACTTCAAGGCGAAATTGCTAATTTTTGACGGCCATCCAAT 1130
||||||||||||||||| | | ||||| |||||||||||||| |||||| || |||||||
Sbjct 1120 GCTAAAGCACTTGCCAATTCA-TTCAATGCGAAATTGCTAATATTTGACAGCAATCCAAT 1178
Query 1131 TTTGGGGGTTATGACTGCTGAAGAATTTGAGTCACTGATGAATGGACCTGCTTCTAAAGA 1190
||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1179 TTTGGGGGTTATGACTGCTAAAGAATTTGAGTCACTGATGAATGGACCTGC-------G- 1230
Query 1191 GCTCATTGACCGAGGGAAAAGCTTGGATTTGTCAGCAGGTGAAGGAGGTTCATCTAGCCC 1250
|||||||| ||||| |||||||| ||||||||| ||||| |||||| |||||||| |||
Sbjct 1231 -CTCATTGATCGAGGAAAAAGCTTAGATTTGTCATCAGGTCAAGGAGATTCATCTATCCC 1289
Query 1251 TTCTCCTGCTACTTCTCCC 1269
|||||||||||||||||||
Sbjct 1290 TTCTCCTGCTACTTCTCCC 1308
Score = 505 bits (273), Expect = 1e-141
Identities = 471/563 (84%), Gaps = 28/563 (5%)
Strand=Plus/Plus
Query 1 ATGGTGTCATCGCCACGGAGTGAATCTACCTCCGGCAACAACAATACAACCAC-TCCCGA 59
||||||||| || |||||||||||||| ||||||| | |||||||||||| | ||||||
Sbjct 1 ATGGTGTCACCGGGACGGAGTGAATCTATCTCCGGCGAGAACAATACAACC-CTTCCCGA 59
Query 60 TGGAATCAGCGGCAAGAGAACTCCTTCC-TCTTCTTCTT-CGGAAGATAAATCTCCTTCA 117
|||| |||||||||||||| ||| ||| || ||| ||| ||| ||| ||||||||||||
Sbjct 60 CGGAAGCAGCGGCAAGAGAATTCC-TCCATCGTCTCCTTCCGG-AGACAAATCTCCTTCA 117
Query 118 TCCAAACGCCCAAAGTTGGGAGATGGCGGCGGCGCTTCTATCGAGAACAGTAAACCTCCA 177
|| |||||| ||||||||||||||||| |||||||||||| ||| | |||| || |||||
Sbjct 118 TCTAAACGCTCAAAGTTGGGAGATGGCAGCGGCGCTTCTACCGATAGCAGTGAAGCTCCA 177
Query 178 ACCTCCGGAGAAGCCAAGATTGCGGCGGAACCAC-CACCACCTCCTGTTGCGGAAGGCTC 236
||||||| ||| ||||||||||| | ||| | | |||| || || |
Sbjct 178 ACCTCCGAAGACGCCAAGATTGC--C-GAA-GGCTTAACACCGACT-TT-------G--- 222
Query 237 AACACCAGATAGTTCTTTTTCCGGATGGAAATATCAACACAGTACATTTAAGACTCCATG 296
||||||||||||||||| ||||||| ||||| |||| ||||||||||||| |||||
Sbjct 223 ----CCAGATAGTTCTTTTTCGGGATGGACATATCGACACTGTACATTTAAGACCCCATG 278
Query 297 GTGTCGATTGCTATCAGAGTCTGCACAGCATCCAAACGTTAACATTTCT-ACATCGTCCT 355
|||| |||||||||| |||||||| |||| | |||| || | ||| | | ||| || |
Sbjct 279 GTGTAAATTGCTATCACAGTCTGCAAAGCAACAAAACCTTTGCCTTTATGA-ATCTTCAT 337
Query 356 TCACTATTGGTTCTTGTCTAACCTCCAACCTCACATTAAAAGATCGGAATCTTGGTGCAT 415
|||| ||||||||||| |||||||| || |||||||| | || |||||||| |||||||
Sbjct 338 GCACTTTTGGTTCTTGTTTAACCTCCGACTTCACATTACATGACCGGAATCTCGGTGCAT 397
Query 416 TATTGTGCAAGATCACAAGAATTCAGCGCAATGGCAATGTTGTAGCGGTTCTAGATATCA 475
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 398 TTTTGTGCAAGATCACAAGAATTCAGCGCAATGGCAATGTTGTAGCGGTTCTAGATATCA 457
Query 476 CAGGAACCGGGGGACCTGTGCGGATAAATGGAGCACTTGCCAACAAGAATGTCAGCCATG 535
||||||||||||||||| ||||||||||| |||| ||| || |||||||||||||||||
Sbjct 458 CAGGAACCGGGGGACCTCTGCGGATAAATAAAGCATTTGTCATCAAGAATGTCAGCCATG 517
Query 536 TCCTACACTCTGGTGACGAATTG 558
|||||||||||||||||||||
Sbjct 518 AGCTACACTCTGGTGACGAATTG 540
> AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801549-12808190
REVERSE LENGTH=3400
Length=3400
Score = 603 bits (326), Expect = 4e-171
Identities = 654/802 (82%), Gaps = 63/802 (8%)
Strand=Plus/Plus
Query 1830 ACTTCTAACGAATCTCTTTGGGAATAAAGTTACCATTTACGA-GCCACAGGGTGAGGATC 1888
||||||| || | ||||||| ||||||| |||| ||| | || |||||||| |||| | |
Sbjct 2001 ACTTCTAGCGGAGCTCTTTGAGAATAAAATTACTATTCA-GATGCCACAGGATGAGAAAC 2059
Query 1889 TTCTTAAATCT-TGGAAGTATCATTTGGATCGTGATGCTGAGACTTTGAAAACAAAGGCT 1947
||||| || | |||||| |||| ||||||||||||||||||||| |||| ||| ||
Sbjct 2060 GTCTTACAT-TGTGGAAGCATCAAATGGATCGTGATGCTGAGACTTCGAAAGTGAAGTCT 2118
Query 1948 AATC-GCAATCACTTGCGCATGGTGTTGGGACGATTTGGTATA-GATTGTGAAGGCA-TT 2004
|| | |||||||||||||||||||||| ||||| |||| || || |||||||| | ||
Sbjct 2119 AA-CTTCAATCACTTGCGCATGGTGTTGCGACGACGTGGTCTAGGA-TGTGAAGG-ACTT 2175
Query 2005 --GA-GAC---G-C-----TGTGCATGAAGGATCTCACACTTCAAAGTGACAGTGCAGAA 2052
|| ||| | | ||||| |||||||||||||||||||||| ||||||| ||||
Sbjct 2176 GAGACGACGTGGTCTAGGATGTGCCTGAAGGATCTCACACTTCAAAGAGACAGTGTAGAA 2235
Query 2053 AAGATCATTGGATGGGCTCTTAGTCACCATATAAAG-TGTAATCCTGATGCTGATCCAGA 2111
|||||||||||||||||| || || ||||||| ||| ||||||||| |||||||||
Sbjct 2236 AAGATCATTGGATGGGCTTTTGGTAACCATAT-AAGCAAAAATCCTGATACTGATCCAG- 2293
Query 2112 TGTTAGTGTCACTTTGTCTCTTGATAGCTTAAAATGTGGAATAGAACTCTTTCAGGCTCT 2171
| || || |||||||||| || ||| || ||| |||||||| |||||| ||| |
Sbjct 2294 -CTAAG-GTTACTTTGTCTCGAGAGAGCATAGAATTTGGAATAGGACTCTTACAGAATGA 2351
Query 2172 TGTAAATGAAACTAAGAGCCCGAAGAAGTCTCTCAAGGACATTGTGACAG-AAGT-TGAT 2229
| |||| | ||| |||| | | ||| |||||||||||| || || | || |
Sbjct 2352 TCTAAAAGGTTCTACGAGCTC--A-AAG------AAGGACATTGTGGTAGAAAATGTG-T 2401
Query 2230 TT-TG-AGA------TAAGTGATGTTATTCCGCCCAGTGACATTGGTGTTACATTTGATG 2281
|| | ||| |||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct 2402 TTGAGAAGAGGCTTCTAAGTGATGTAATTCTGCCCAGTGACATTGATGTTACATTTGATG 2461
Query 2282 ACATTGGGGCACTTGAGAATGTCAAAGACACT-TTAAAGGAATTGGTTATGCTTCCTTTA 2340
||||||||||||||||||| |||||||| | | ||||||||| |||||||||||||||||
Sbjct 2462 ACATTGGGGCACTTGAGAAAGTCAAAGATA-TCTTAAAGGAACTGGTTATGCTTCCTTTA 2520
Query 2341 CAACGGCCTGAACTTTTCTGCCAAGGGC-AATTAACAACGCCTTGTAAAGGAATTCTCTT 2399
||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||
Sbjct 2521 CAACGGCCTGAACTTTTCTGC-AAGGGGGAATTAACAAAGCCTTGTAAAGGAATTCTTTT 2579
Query 2400 ATTTGGACCTGCTGGAACTGGAAAGACCATGCTTGCAAAGGCATTGGCAACGGAAGCTGG 2459
|||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct 2580 ATTTGGACCTCCTGGAACTGGAAAGACCATGCTTGCAAAAGCAGTGGCAAAGGAAGCTGA 2639
Query 2460 TGCTAATTTGATCAACATCTCAATGTCAAG------------GTGGTTTAGTGAGGGTGA 2507
||| || || |||||||||||||||||||| ||||||| ||||||||||
Sbjct 2640 TGCGAACTTCATCAACATCTCAATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGA 2699
Query 2508 GAAATATGTCAAAGCTGTCTTTTCGTTGGCCAGTAAAATCTCCCCTAGCATTATCTTTAT 2567
||| |||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |
Sbjct 2700 GAAGTATGTCAAAGCTGTCTTTTCTTTGGCCAGTAAAATGTCCCCTAGCGTTATCTTTGT 2759
Query 2568 GGACAAGGTGGACAGCATGCTA 2589
|||| |||||||||||||||||
Sbjct 2760 GGACGAGGTGGACAGCATGCTA 2781
Score = 573 bits (310), Expect = 3e-162
Identities = 450/516 (87%), Gaps = 16/516 (3%)
Strand=Plus/Plus
Query 2610 AAATGAGTTCATAATAAATTGGGACGGTCTGAGGACAAACGAAAAGGAACATGTTCTGGT 2669
|||||||||||| || ||||||||||||| | ||| | |||| ||||| |||||||||
Sbjct 2829 AAATGAGTTCATGATGCATTGGGACGGTCTTACGACTCAGGAAAGGGAACGTGTTCTGGT 2888
Query 2670 TCTTGCATCCACAAATAGACCTTTTGACCTTGATGAGGCTGTCATTAGAAGGTTGCCTCA 2729
|||||| |||||||| | ||||||||||||||||||||||| |||||| ||||||| |
Sbjct 2889 CCTTGCAGCCACAAATCGGCCTTTTGACCTTGATGAGGCTGTTATTAGACGGTTGCCCCG 2948
Query 2730 TAGGTTGATGGTGGGACTACCAGATGC-TCTGAGTAGAGCAAAGATATTGAAGGTTATAC 2788
||||||||||||||||||||||||| | || | ||||||| ||||| ||||||||||
Sbjct 2949 TAGGTTGATGGTGGGACTACCAGATACTTC-AAATAGAGCATTTATATTAAAGGTTATAC 3007
Query 2789 TTGCAAAAGAAGACTTGTCCCCTGATTTTGATATCGATGCAG-TTGCTAGTATGACTAAT 2847
|||||||||||||||||||||||||||| ||||| | || || |||||||||||||||||
Sbjct 3008 TTGCAAAAGAAGACTTGTCCCCTGATTTGGATATTGGTG-AGATTGCTAGTATGACTAAT 3066
Query 2848 GGATATTCTGGAAACGATCTTAAGAATCTATGTGTTACTGCTGCCCGCTGTCGAATCAAG 2907
||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||
Sbjct 3067 GGATATTCTGGAAGTGATCTTAAGAATCTATGTGTTACTGCTGCCCACCGTCCAATCAAG 3126
Query 2908 GAGATAGTGGAGAAGGAAAAAAGTGAGCGAGATGCTGCTCTGGCTGAAGG-AAGAGTTCC 2966
|||||| |||||||||||||||| ||||||||||||||||||||| |||| || ||||||
Sbjct 3127 GAGATATTGGAGAAGGAAAAAAGAGAGCGAGATGCTGCTCTGGCTCAAGGCAA-AGTTCC 3185
Query 2967 TCCAGCACGAAGTGGAAGTTCTGATATCCGAGCTTTAAACATAGAGGATTTCAGAAACGC 3026
|||| | | |||||||||||||||| |||||||||||||| | |||||||||||| ||||
Sbjct 3186 TCCACCTCTAAGTGGAAGTTCTGATCTCCGAGCTTTAAACGTGGAGGATTTCAGAGACGC 3245
Query 3027 ACTTGAGCTGGTGAGTATG--AGCGTCTCATCAGAGTCTGTGAAC-ATGACAGCGCTTCG 3083
|| | || ||| | || || ||||||||||||||||||| || | |||||||||||||
Sbjct 3246 ACATAAG-TGG-GTGTCTGCGAGCGTCTCATCAGAGTCTGCGA-CTATGACAGCGCTTC- 3301
Query 3084 AA-AATGGAACGAACATT-ACGGGGAAGGTGGATCC 3117
|| |||||||| ||| | |||||||||||||||||
Sbjct 3302 AACAATGGAACAAAC-TCCACGGGGAAGGTGGATCC 3336
Score = 416 bits (225), Expect = 6e-115
Identities = 350/410 (85%), Gaps = 10/410 (2%)
Strand=Plus/Plus
Query 1426 AGGGGACCACCTTATGGGGTTAGAGGGAAAGTACTTTTAGTATTTGATGAGAATCCTTCA 1485
|||||||| ||| ||||| || |||||||||| ||||||| ||||||||||||||||||
Sbjct 1555 AGGGGACCTCCTAATGGGACTACAGGGAAAGTAATTTTAGTGTTTGATGAGAATCCTTCA 1614
Query 1486 GCTAAAGTGGGTGTTAGATTTGAGAATCCAGTAGTTGATGGCGTTGATCTTGGTGAACTG 1545
||||||||||||||||||||||| || ||| || |||||| |||||||||||||||||
Sbjct 1615 GCTAAAGTGGGTGTTAGATTTGATAAGCCAATACCTGATGGAGTTGATCTTGGTGAACTA 1674
Query 1546 TGTGAAATG-GGACATGGGTTCTTCTGCAGTGCTACTGATCTTCAGTTTGAAAGCTCGGG 1604
||||||| | ||||||||||||||||||| ||||||||||||| ||| |||||||| |
Sbjct 1675 TGTGAAA-GCGGACATGGGTTCTTCTGCAAAGCTACTGATCTTCCGTTCAAAAGCTCGAG 1733
Query 1605 TTCTGAGGATCTAAAT-GAATTACTTGTTAGC-CAATTGTTTGAGGTTGCCCATGATGAG 1662
|| | |||||||| | || |||||||||| | || ||||||||||||| |||| ||||
Sbjct 1734 TTTTAAGGATCTAGTTAGA-TTACTTGTTAACACA-TTGTTTGAGGTTGTCCATTCTGAG 1791
Query 1663 AGCAGAACTTGTCCGGTTATTCTATTCCTGAAAGATGATGAGGAAGTTT-TTGTTGGAAA 1721
||||||||||||||| |||||||||| ||||||||| |||| || | | ||| ||||||
Sbjct 1792 AGCAGAACTTGTCCGTTTATTCTATTTTTGAAAGATGCTGAGAAA-TCTGTTGCTGGAAA 1850
Query 1722 -TTCCGATTTCTGCTCTGCATTCAAAAGCAAAGTTGAAGAAATCCCAGATAACGTAATTG 1780
||| ||||| | |||||| ||| ||| || | ||||| | ||||||| ||||||||||
Sbjct 1851 CTTC-GATTTGTACTCTGCGTTCCAAATCAGACTTGAATATCTCCCAGAAAACGTAATTG 1909
Query 1781 TGATCTGTTCACAGACACACTCTGATAATCACAAGGAGAAGGATATTGGA 1830
|||||||||||||||||||||| ||| ||| ||||| |||||||||||||
Sbjct 1910 TGATCTGTTCACAGACACACTCAGATCATCTCAAGGTGAAGGATATTGGA 1959
Score = 246 bits (133), Expect = 8e-64
Identities = 262/322 (81%), Gaps = 18/322 (6%)
Strand=Plus/Plus
Query 826 CAAGCTGCAAGATTCAGGA-AATATATTCAAGCTGGAATTGTTGA-AGGCG-AAAGATTG 882
||| |||||| ||||| || || ||||||||||| ||||| | ||||| ||| | ||
Sbjct 850 CAATCTGCAATATTCA-GAGAAGCCATTCAAGCTGGTTTTGTT-AGAGGCGAAAACA-TG 906
Query 883 AAATTTTCATTCGAAAATTTTCCTTATTATTTGAGTGAGA-ATACAAAGAAC-GTCTTAC 940
|| |||||||| |||||||||| |||||||||||||| | |||||||| | | ||||
Sbjct 907 GAAGTTTCATTCAAAAATTTTCCCTATTATTTGAGTGA-ATATACAAAG-GCTGCCTTAT 964
Query 941 TAGCTGTTTCACATATACATCTGAACAAAGAGAATACAGGATATGCCCTATATGCCTCCG 1000
|| || |||| ||||||||||| |||| || | || ||||| || || || |||||
Sbjct 965 TATATGCTTCATATATACATCTG----AAGA-AA-AAAGAATATGTCCAATTTGTCTCCG 1018
Query 1001 ACTTTACCACTTTGAATCCAAGGATATTGCTTTCTGGTCCTGCAGGAACTGAAATATACC 1060
|| | ||| || |||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1019 ACATGACCCCTATGAATCCAAGGATATTGCTTTCTGGTCCCGCAGGGTCTGAAATATACC 1078
Query 1061 AAGAGATATTAGCTAAAGCACTTGCCAAAT-ACTTCAAGGCGAAATTGCTAATTTTTGAC 1119
|||||| |||||||||||||||||| | || || |||||||||||||||| ||||||
Sbjct 1079 AAGAGACGTTAGCTAAAGCACTTGCCCG-TGACCTCGAGGCGAAATTGCTAATATTTGAC 1137
Query 1120 GGCCATCCAATTTTGGGGGTTA 1141
|| |||||||||||||| |||
Sbjct 1138 AGCTATCCAATTTTGGGGTTTA 1159
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156370361331
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5