BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315177
Length=2439
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 1657 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 1195 0.0
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 1053 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 1026 0.0
AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 918 0.0
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 761 0.0
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 704 0.0
AT1G61990.1 | Symbols: | Mitochondrial transcription terminati... 484 1e-135
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 416 5e-115
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 346 6e-94
AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | ch... 313 6e-84
AT1G56380.2 | Symbols: | Mitochondrial transcription terminati... 182 2e-44
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 1657 bits (897), Expect = 0.0
Identities = 1144/1264 (91%), Gaps = 14/1264 (1%)
Strand=Plus/Plus
Query 1134 GTTGGTCCAGTTGCAGAAATGGCGTCATTTGAGAGTTTCAGTGAACCTTCTCGAAAAGCC 1193
||||||||||||| ||||||| |||||||| || ||| |||||||||| ||||||||| |
Sbjct 30 GTTGGTCCAGTTGAAGAAATGTCGTCATTTAAGCGTTCCAGTGAACCTCCTCGAAAAGGC 89
Query 1194 ATCTCCTTTTCCCAATTCCTTCTCCTATGCTACTGCTACAGATGCGAGCCTTAGAGCTGG 1253
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 90 ATCTCCTTTTTCCAATTCCTTCTCCTATGCTAATGCTACAGATGCGAGCCTTAGAGCTGG 149
Query 1254 TCGAAAAAGGTTGAATTTTTCTGTCTCTTACCTCGTTGCTTCATTGGGTTTAACTAAAGA 1313
||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||| |
Sbjct 150 TCGAAAAGGGTTGAGTTTTTCTGTCTCTTACCTCGTTGATTCATTGGGTTTACCTAAA-A 208
Query 1314 A-GTCGCAGAATCGATCTCAAGGAAAGTCTGTTTGGTTGACAAGGGCAATCCTGATTCTG 1372
| ||||||||||||||||||| ||||||| | || | ||||| ||||||||||||||||
Sbjct 209 AGGTCGCAGAATCGATCTCAAAGAAAGTCAGCTTCGAGGACAAAGGCAATCCTGATTCTG 268
Query 1373 TTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAGATCTCCACCATCGTTACGG 1432
|||||||||| ||||||||| ||| ||||||||||||||||||||| | |||| ||||||
Sbjct 269 TTCTGAGTCTATTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCAAGCATCATTACGG 328
Query 1433 ATTATCCACAATTGCTAATAGCTGATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTC 1492
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct 329 ATTATCCACAATTGCTAGTAGCTGATGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTC 388
Query 1493 TGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCT-GTGATTGTATCTACAGTTCCTAAA 1551
||| |||||||||||||||||| ||||||||| || | |||||||||||||||||| ||
Sbjct 389 TGCAGTCCAGAGGAGCTTCAAGGTCTGAGCTCACTCAT-ATTGTATCTACAGTTCCTGAA 447
Query 1552 ATTTTGGGAAAGAAAGGGGACAAAACTATCAGCATATACTATGATATCGTCAAAGAGATT 1611
|| ||||| |||| ||||||||||||||||||||||||||||||| | || |||||||||
Sbjct 448 ATCTTGGGGAAGAGAGGGGACAAAACTATCAGCATATACTATGATTTTGTTAAAGAGATT 507
Query 1612 ATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAATTATGTCATTCTTTTCCACAGGGTAGT 1671
|||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct 508 ATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGT 567
Query 1672 AATCTGGAGAACAAGATCAGAAATGTTTCGGTTCTGAGAGAGTTAGGTGTGCCTCAGAGG 1731
|| | ||||||||| ||||||||||||| |||| ||||||| || ||||| ||||| | |
Sbjct 568 AAGCAGGAGAACAAAATCAGAAATGTTTTGGTTTTGAGAGAATTGGGTGTTCCTCA-AAG 626
Query 1732 GTT-TTATTCTCC-TTGCTCATATCTGATCACCAACCTGTCTGTGGAAAAGAAAATTTTG 1789
||| || ||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 627 GTTGTTGTTC-CCATTGCTTATATCTGATCACCAACCTGTCTGTGGAAAAGAAAATTTTG 685
Query 1790 AAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCGACCACCTCAAAGTTTGTCG 1849
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 686 AAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCA 745
Query 1850 AAGCTCTAAACGTTGTTTATAGACTGAGCGACGAAACAATAGAAGAAAAAGTTAGTGTCT 1909
||||||| | |||||||| ||| | ||||| |||| ||||||| |||||||| |||||
Sbjct 746 AAGCTCTTAGGGTTGTTTACAGATTCCGCGACAAAACTATAGAAGCAAAAGTTAATGTCT 805
Query 1910 GTAAAGGGTTAGGTTTTTCTGTTGGAGATGTATGGGAAATGTTCAAGAAGTGGCCTTGCT 1969
||||| | ||||| |||||||||||||||||||||| |||||| |||||||| |||| ||
Sbjct 806 GTAAAAGTTTAGGCTTTTCTGTTGGAGATGTATGGGCAATGTTTAAGAAGTGTCCTTCCT 865
Query 1970 TTCTCAATAACTCGGAGAAGAAGATAAGT-CAAACATTTG-AAACCCTGAAGAAGTGTGG 2027
|||| ||| ||| ||||| |||||| || ||||| || | |||||||||||||||||||
Sbjct 866 TTCTGAATTTCTCTGAGAACAAGATA-GTTCAAAC-TTGGGAAACCCTGAAGAAGTGTGG 923
Query 2028 ACTACCCGAAGACGAGGTCCTCTCACTGTTGAAGAAGTTTCCACAATGCATTAACGCTTC 2087
||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 924 ACTACTCGAAGACGATGTCCTCTCAGTGTTGAAGAAGTTTCCACAATGCATTAATGCTTC 983
Query 2088 AGAGCAGAAGATTTTGAACACCATTGAAACATTTCTAGACCTAGGATTTAGCAGAGATGA 2147
|||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||||
Sbjct 984 AGAGCAGAAGATAATGAACTCCATTGAAACATTTCTAGGCTTAGGATTTAGCAGAGATGA 1043
Query 2148 GTTTGCAATGATAGCCAAGCGCTTTCCTCCATGCCTTATTTTATCTGCAGCGACGGTGAA 2207
| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct 1044 GGTTGCAATGATAGCCAAGCGCTTTCCTCAATGCCTTATTTTATCTGCAGAGACAGTGAA 1103
Query 2208 GAAGAAGACTGAGTTTGTGGTAAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAC 2267
||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1104 GAAAAAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAC 1163
Query 2268 CCCTGCGGTACTTGGATACAGCCTCGAGAAGAGGACTGTACCCA-GGTGTAATGTAATTA 2326
|||||||||||||||||||||| | |||||||||||| | |||| |||||||||||||||
Sbjct 1164 CCCTGCGGTACTTGGATACAGCTTAGAGAAGAGGACTAT-CCCAAGGTGTAATGTAATTA 1222
Query 2327 AAGCTCTCATGTCAAAAGGATTGCCCGGAAGTGAACTGCCTCCAATGTCGTCTGTTTTGG 2386
||||||||||||| ||||||| || ||||||||||| ||| |||||||||||||||||
Sbjct 1223 AAGCTCTCATGTCCAAAGGATCGCTTGGAAGTGAACTCCCTGGAATGTCGTCTGTTTTGG 1282
Query 2387 TATG 2390
||||
Sbjct 1283 TATG 1286
Score = 861 bits (466), Expect = 0.0
Identities = 724/847 (85%), Gaps = 23/847 (3%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAA-GTTGGTCCAGTTTCAGAAATGGCGTCACTT 59
|||||||||||||| |||||||||| ||| |||||||||||| ||||||| ||||| ||
Sbjct 1 ATGTATTCTCTGATACTCCATGGAA-AAAGGTTGGTCCAGTTGAAGAAATGTCGTCATTT 59
Query 60 GAGGGTTTCGGTGAATCTTTTCCAAAATGG-ATCTGCTTTTTCCAATTCCTTCTCCTCCG 118
|| ||| | ||||| || || |||| || |||| |||||||||||||||||||||
Sbjct 60 AAGCGTTCCAGTGAACCTCCTCGAAAA-GGCATCTCCTTTTTCCAATTCCTTCTCCT--- 115
Query 119 CTGCTAGTGCTTCTGATGTGAGTCC-TAGAGTTGGTCGAAAAGGAAACAACTTTACAGTC 177
||||| |||| | |||| ||| || ||||| |||||||||||| | ||| | |||
Sbjct 116 ATGCTAATGCTACAGATGCGAG-CCTTAGAGCTGGTCGAAAAGGGTTGAGTTTTTCTGTC 174
Query 178 TCTTACCTCGTTGATTCATTGGGTTTACCTAACAAGCTCGCAGAATCTATTTCAAGGAAA 237
|||||||||||||||||||||||||||||||| ||| |||||||||| || |||| ||||
Sbjct 175 TCTTACCTCGTTGATTCATTGGGTTTACCTAAAAAGGTCGCAGAATCGATCTCAAAGAAA 234
Query 238 GTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGTCATGGG 297
||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct 235 GTCAGCTTCGAGGACAAAGGCAATCCTGATTCTGTTCTGAGTCTATTGAGAAGTCATGGG 294
Query 298 TTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCCACTATTGCTTA-TAGCTGA 356
||||| ||||||||||||||||||||||||||||||||||||| |||||| | |||||||
Sbjct 295 TTCACTGATTCTCAGATCTCAAGCATCATTACGGATTATCCACAATTGCT-AGTAGCTGA 353
Query 357 TGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTC 416
|||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 354 TGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAAGGTC 413
Query 417 TGAGCTCACTGAGATTGTTTCTGCAGTTCC-GAAAATCTTGGGAAAGAAAGAGGGA-AAA 474
|||||||||| | ||||| ||| ||||||| |||| ||||||| |||| || |||| |||
Sbjct 414 TGAGCTCACTCATATTGTATCTACAGTTCCTGAAA-TCTTGGGGAAGAGAG-GGGACAAA 471
Query 475 TCTATCAGCGCATACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCAAT 534
|||||||| |||||||||||| || |||| ||||||||||| ||||||||||||||
Sbjct 472 ACTATCAGCATATACTATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGAGTTCCAAG 531
Query 535 TTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAAAT 594
|| | || | ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 532 TTCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAAAT 591
Query 595 GTTTTGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTCTATC 653
||||||||||||||||||||||| || ||||| ||| || || ||| |||||||| ||||
Sbjct 592 GTTTTGGTTTTGAGAGAATTGGGTGTTCCTCAAAGG-TTGTTGTTCCCATTGCTTATATC 650
Query 654 CGATGGC-AGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGGTAGTTA 712
||| | | || ||| |||||||||||||| ||| |||||||||||||||| || |||
Sbjct 651 TGATCACCA-ACCTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTG 709
Query 713 AGATTGGTTTTGATCCAACCACCTCAACGTTTGTCGAAGCTCTCAAGGTTCTTTACACAT 772
|||| |||||||||||||||||||||| ||||||| ||||||| | |||| |||||| ||
Sbjct 710 AGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCAAAGCTCTTAGGGTTGTTTACAGAT 769
Query 773 TGAGCGACAAAGGAATTGAAAGTAAA--TTCAATGCCTGTAAAAGGTTAGGCTTGGCTGT 830
| |||||||| || ||| | ||| || |||| ||||||||| |||||||| ||||
Sbjct 770 TCCGCGACAAAACTATAGAA-GCAAAAGTT-AATGTCTGTAAAAGTTTAGGCTTTTCTGT 827
Query 831 GGGCGAT 837
|| |||
Sbjct 828 TGGAGAT 834
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 1195 bits (647), Expect = 0.0
Identities = 1089/1296 (84%), Gaps = 56/1296 (4%)
Strand=Plus/Plus
Query 1124 CCA-GGGAGAA-GTTGGTCCAGTTGCAGAAATGGCGTCATTTGAGAGTTTCAGTGAACCT 1181
||| || |||| |||||| ||||||||||||||||||||||||||| || || |
Sbjct 247 CCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGCGTCATTTGAGA--TT---TG----T 297
Query 1182 TCTCG-AAAA-GCCATCTCCTTTTCCCAATTCCT-TCTCCTATGCTACTGCTACAGATGC 1238
| | | |||| | ||| ||||| | ||||||| | || | ||||| |||||| |||
Sbjct 298 TGT-GCAAAATG-GATCAGCTTTTTCTAATTCCTAT-TCTTCTGCTAGTGCTACTGATTT 354
Query 1239 GAGCCT-TAGAGCTGGTCGAAAAAG-GTTGAATTTTTCTGTCTCTTACCTCGTTGCTTCA 1296
||| || |||| |||||| ||||| | ||| ||| |||||||||||||||||| ||||
Sbjct 355 GAG-CTCAAGAGATGGTCG-AAAAGTGAAGAACTTTACTGTCTCTTACCTCGTTGATTCA 412
Query 1297 TTGGGTTTAACTA-AAGAAGTCGCAGAATCGATCTCAAGGAAAGTCTGTTTGGTTG-ACA 1354
||||||||| ||| || || |||| ||||| ||||||| ||||||| |||| | || |||
Sbjct 413 TTGGGTTTAGCTACAA-AACTCGCTGAATCAATCTCAAAGAAAGTCAGTTTCG-TGAACA 470
Query 1355 AGGGCAATCCTGATTCT-GTTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAG 1413
||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||||
Sbjct 471 AGGGCAATCCTGATT-TAGTTCTGAGTCTTTTTAGAAGTTATGGGTTCACAAATTCTCAG 529
Query 1414 ATCTCCACCATCGTTACGGATTATCCACA-ATTGCTAATAGCT-GATGCTGAGAAATCAC 1471
||||||| |||| ||||||||||||| | |||||| || | ||||||||||||||||
Sbjct 530 ATCTCCAGCATCATTACGGATTATCC-TAGATTGCTTCTA-ATAGATGCTGAGAAATCAC 587
Query 1472 TTGCTCCCAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTGTGA 1531
||| | ||||||||||||| || ||| ||||||||||||||| |||||||| || ||
Sbjct 588 TTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTCAAGCCCTGAGCTCACTCAGA 647
Query 1532 TTGTATCTACAGTTCCTAAAATTTTGGGAAAGAAAG-GGGACAAAACTATCA-GCATATA 1589
|||| ||||||||||||||||| ||||||| ||||| |||| || || | | ||| |||
Sbjct 648 TTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGGA-AAGTCTCT-AGGCAGATA 705
Query 1590 CTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAATTATG 1649
||||||| |||||||||||||||||||||| |||||||||||||||| ||||| || ||
Sbjct 706 CTATGATTTCGTCAAAGAGATTATAGAAGCAGATAAGAGTTCCAAGTACGAAACTTTGTG 765
Query 1650 TCATTCTTTTCCACAGGGTAGTAATCTGGAG-AACAAGATCAGAAATGTTTCGGTTCTGA 1708
||| |||| ||| ||| || || | || | || || |||||||||||||||||||| |
Sbjct 766 TCAACCTTTGCCAGAGGCTAATAGGCAGG-GTAATAAAATCAGAAATGTTTCGGTTCTTA 824
Query 1709 GAGAGTTAGGTGTGCCTCAGAGGGTT-TTATTCTCCTTGCTCATATCTGAT-CACCAACC 1766
|||| || ||||||||||||| ||| ||||||||||||||||| |||||| | ||||||
Sbjct 825 GAGACTTGGGTGTGCCTCAGA-AGTTGTTATTCTCCTTGCTCATCTCTGATGC-CCAACC 882
Query 1767 TGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGA 1826
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 883 TGTTTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAGGTTGTTGAGATGGGTTTTGA 942
Query 1827 TCCGACCACCTCAAAGTTTGTCGAAGCTCTAAACGTTGTTTATAGACTGAGCGACGAAAC 1886
||| |||||||||||||||||| ||||||| | | |||||| ||| | | |||| ||||
Sbjct 943 TCCAACCACCTCAAAGTTTGTCCAAGCTCTTAGGGCTGTTTACAGATTCACCGACAAAAC 1002
Query 1887 AATAGAAGAAAAAGTTAGTGTCTGTAAAGGGTTAGGTTTTTCTGTTGGA-GATGTATGGG 1945
||||||||||| ||||| ||| | ||||||||| || ||| |||| ||| ||||||||||
Sbjct 1003 AATAGAAGAAAGAGTTAATGTGTATAAAGGGTTCGGCTTTGCTGT-GGAAGATGTATGGG 1061
Query 1946 AAATGTTCAAGAAGTGGCCTTGCTTTCTCAATAACTCGGAGAAGAAGATAAGTCAAACAT 2005
|||||||||||| || |||| |||| | |||| |||||||||||||| |||| |||
Sbjct 1062 CAATGTTCAAGAAATGTCCTTACTTTTTGAATAGTTCGGAGAAGAAGATTGGTCAGACAA 1121
Query 2006 TTGAAACCCTGAAGAAGTGTGGACTACCCGAAGACGAGGTCCTCTCACTGTTGAAGAAGT 2065
||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||
Sbjct 1122 TTGAAACCCTGAAGAAGTGTGGACTACTCGAAGACGAGGTCATCTCAGTGTTGAAAAAGT 1181
Query 2066 TTCCACAATGCATTAACGCTTCAGAGCAGAAGATTTTGAACACCATTGAAACATTTCTAG 2125
||| || |||||| |||||||||||||||| |||||| ||||||||| ||||||||
Sbjct 1182 ATCCGCAGTGCATTGGTACTTCAGAGCAGAAGATATTGAACTCCATTGAAATATTTCTAG 1241
Query 2126 ACCTAGGATTTAGCAGAGATGAGTTTGCAATGATAGCCAAGCGCTTTCCTCCA-TGCCTT 2184
|||||| || |||||||||||||| || || | ||||||||||||| | || |||
Sbjct 1242 GCCTAGGCTTCAGCAGAGATGAGTTCATAACAATGGTTAAGCGCTTTCCTC-AGTGTCTT 1300
Query 2185 ATTTTATCTGCAGCGACGGTGAAGAAGAAGACTGAGTTTGTGGTAAAGAAGATGAATTGG 2244
||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1301 ATTTTATCTGCAGAGACGGTGAAGAAGAAGATTGAGTTTGTGGTGAAGAAGATGAATTGG 1360
Query 2245 CCACTAAAGGCTGTGGTTTCAACCCCTGCGGTACTTGGATACAGCCTCGAGAAGAGGACT 2304
||||| |||| ||||||||||| ||| ||||||||||||||| ||| ||||||||||||
Sbjct 1361 CCACTGAAGGATGTGGTTTCAAATCCTACGGTACTTGGATACAACCTGGAGAAGAGGACT 1420
Query 2305 GTACCCA-GGTGTAATGTAATTAAAGCTCTCATGTCAAAAGGA-TTG-C-----C-C-GG 2354
|| |||| |||||||||| ||| ||||||||||||||||| || || | | | ||
Sbjct 1421 GT-CCCAAGGTGTAATGTTATTGAAGCTCTCATGTCAAAAAGACTTCTCGGAGACACAGG 1479
Query 2355 AAGTGAACTGCCTCCAATGTCGTCTGTTTTGGTATG 2390
||||||||| ||||||||||||||||||||||||||
Sbjct 1480 AAGTGAACTCCCTCCAATGTCGTCTGTTTTGGTATG 1515
Score = 734 bits (397), Expect = 0.0
Identities = 707/850 (83%), Gaps = 48/850 (6%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTG 60
||||||||| |||| ||||||||||||| |||||| ||||| |||||||||||||| |||
Sbjct 230 ATGTATTCTGTGATACTCCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGCGTCATTTG 289
Query 61 AGGGTTTCGGTGAATCTTTTCCAAAATGGATCTGCTTTTTCCAATTCCTTCTCCTCCGCT 120
| | || || || | ||||||||||| |||||||| |||||| | | || ||
Sbjct 290 A--GATT---TG----TTGTGCAAAATGGATCAGCTTTTTCTAATTCC-TAT--TCTTCT 337
Query 121 GCTAGTGCTTCTGATGTGAGTC-CTAGAGTTGGTCGAAAAG-GAAACAACTTTACAGTCT 178
||||||||| ||||| |||| | | |||| ||||||||||| | || |||||||| ||||
Sbjct 338 GCTAGTGCTACTGATTTGAG-CTCAAGAGATGGTCGAAAAGTG-AAGAACTTTACTGTCT 395
Query 179 CTTACCTCGTTGATTCATTGGGTTTACCTA-ACAAGCTCGCAGAATCTATTTCAAGGAAA 237
|||||||||||||||||||||||||| ||| | || ||||| ||||| || |||| ||||
Sbjct 396 CTTACCTCGTTGATTCATTGGGTTTAGCTACAAAA-CTCGCTGAATCAATCTCAAAGAAA 454
Query 238 GTCAGCTTCGAGGACAAGGGCAATCCTG-TTTCTGTTCTGAATCTTTTGAGAAGTCATGG 296
||||| |||| | ||||||||||||||| ||| ||||||| |||||| |||||| ||||
Sbjct 455 GTCAGTTTCGTGAACAAGGGCAATCCTGATTTA-GTTCTGAGTCTTTTTAGAAGTTATGG 513
Query 297 GTTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCC-ACTATTGCTTATAGCT- 354
||||||| ||||||||||||| |||||||||||||||||||| | ||||||| || |
Sbjct 514 GTTCACAAATTCTCAGATCTCCAGCATCATTACGGATTATCCTAG-ATTGCTTCTAA-TA 571
Query 355 GATGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGC 414
|||||||| |||||||||| | |||||||||||||||| |||| |||||||||||||||
Sbjct 572 GATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTCAAGC 631
Query 415 TCTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGAAAA 474
||||||||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||||
Sbjct 632 CCTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGGAAAG 691
Query 475 TCTATCAGCGCA--TACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCA 532
||| | || ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 692 TCTCT-AG-GCAGATACTATGATTTCGTCAAAGAGATTATAGAAGCAGATAAGAGTTCCA 749
Query 533 ATTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAG-AATAAAATTAGA 591
| | | || | ||||| |||||||||||| || || ||||| | |||||||| |||
Sbjct 750 AGTACGAAACTTTGTGTCAACCTTTGCCAGAGGCTAATAGGCAGG-GTAATAAAATCAGA 808
Query 592 AATGTTTTGGTT-TTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTC 649
||||||| |||| || ||||| ||||| |||||||||| | || |||||||| ||||| |
Sbjct 809 AATGTTTCGGTTCTT-AGAGACTTGGGTGTGCCTCAGAAG-TTGTTATTCTCCTTGCT-C 865
Query 650 TATC-C-GATGGC-AGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGG 706
||| | |||| | | || |||||||||||||||||| ||| ||||||||||||||||||
Sbjct 866 -ATCTCTGATGCCCA-ACCTGTTTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAGG 923
Query 707 TAGTTAAGATTGGTTTTGATCCAACCACCTCAACGTTTGTCGAAGCTCTCAAGGTTCTTT 766
| ||| |||| |||||||||||||||||||||| ||||||| ||||||| | || | |||
Sbjct 924 TTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGCTCTTAGGGCTGTTT 983
Query 767 ACACATTGAGCGACAAAGGAATTGAAAGTAA-A-TTCAATGCCTGTA-AAAGG-TTAGGC 822
||| ||| | ||||||| ||| ||| | || | || |||| |||| ||||| || |||
Sbjct 984 ACAGATTCACCGACAAAACAATAGAA-GAAAGAGTT-AATG--TGTATAAAGGGTTCGGC 1039
Query 823 TTGGCTGTGG 832
|| |||||||
Sbjct 1040 TTTGCTGTGG 1049
Score = 174 bits (94), Expect = 3e-42
Identities = 245/312 (79%), Gaps = 34/312 (11%)
Strand=Plus/Plus
Query 837 TTCTGAGAAGAAGATAGAGAACTCCATTGAAACATTTCTAGGTCTAGGATTCACCAGAGA 896
||| ||| |||||||| |||||||||||||| ||||||||| ||||| |||| ||||||
Sbjct 1201 TTCAGAGCAGAAGATATTGAACTCCATTGAAATATTTCTAGGCCTAGGCTTCAGCAGAGA 1260
Query 897 TGAGTTTTTGATGATGGTCAAGCGGTTTCCTCAGTG-C--ATTGGATATTC---GAC--- 947
|||||| | | ||||| ||||| ||||||||||| | ||| || | | |||
Sbjct 1261 TGAGTTCATAACAATGGTTAAGCGCTTTCCTCAGTGTCTTATTTTATCTGCAGAGACGGT 1320
Query 948 -----AG-AG--T-A--TT-TGGTGAAGGAGATGAATTGGCCACTTAAGGCTGTGGCTTC 995
|| || | | || |||||||| |||||||||||||||| |||| ||||| |||
Sbjct 1321 GAAGAAGAAGATTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTGAAGGATGTGGTTTC 1380
Query 996 -AATCCCTCA-GGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTA 1053
||| ||| | |||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1381 AAAT-CCT-ACGGTACTTGGATACAACCTGGAGAAGAGGACTGTCCCAAGGTGTAATGTT 1438
Query 1054 ATCAAAGCTCTCATGTCAAAAGGA-TTGTT-----C---GGAAGTGAACTCCCTCCAATA 1104
|| ||||||||||||||||| || || | | ||||||||||||||||||||
Sbjct 1439 ATTGAAGCTCTCATGTCAAAAAGACTTCTCGGAGACACAGGAAGTGAACTCCCTCCAATG 1498
Query 1105 TCATCTGTTTTG 1116
|| |||||||||
Sbjct 1499 TCGTCTGTTTTG 1510
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 1053 bits (570), Expect = 0.0
Identities = 1061/1291 (82%), Gaps = 62/1291 (5%)
Strand=Plus/Plus
Query 1134 GTTGGTCCAGTTGCAGAAATGGCGTCA-TTTGAGAGTTTCAGTGAACCTTCTCG-AAAA- 1190
|||||||||||| |||||| ||||| | ||| || ||||||||||| ||| | | ||||
Sbjct 208 GTTGGTCCAGTTTCAGAAAGGGCGTGACTTT-AGTGTTTCAGTGAAGCTT-TTGCAAAAT 265
Query 1191 GCCA-TCTC--CTTTTCCCAATTCCTTCTC--CT-ATGCTACTGCTACAGATGCGAGCCT 1244
| | |||| |||| ||||||| ||||| || |||||||||| | |||| |||| |
Sbjct 266 G-TATTCTCTGTTTTTTCCAATTCATTCTCTTCTGTTGCTACTGCTGCTGATGTGAGCTT 324
Query 1245 TAGAGCTGGTCGAAAAAGGT-TGAATTTTTCTGTCTCTTACCTCGTTGCTTCATTGGGTT 1303
||||| | |||| ||||||| || ||| |||||||||||||||||| |||||||||||
Sbjct 325 TAGAGATAGTCG-AAAAGGTAACAACTTTACTGTCTCTTACCTCGTTGATTCATTGGGTT 383
Query 1304 TAACTAAAGAAG-TCGCAGAATCGATCTCAAGGAAAGTCTGTTTGGTTG-ACAAGGGCAA 1361
|| || | ||| |||||||||||||||| | ||||||| |||| | | ||||||||||
Sbjct 384 TAGCTTCA-AAGCTCGCAGAATCGATCTCGATGAAAGTCAGTTTCG-AGAACAAGGGCAA 441
Query 1362 TCCTGATTCTGTTCTGAGTCTT-TTGAGAAGTTATGCGTTCACTGATTCTCAGATCTCCA 1420
||||||| | ||||||| |||| || |||||| ||| |||||| ||||||||||||||||
Sbjct 442 TCCTGATACAGTTCTGAATCTTCTT-AGAAGTCATGAGTTCACAGATTCTCAGATCTCCA 500
Query 1421 CCATCGTTACGGATTATCC-ACAATTGCTAATAGCTGATGCTGAGAAA-TCACTTGCTCC 1478
|||| || |||||||||| || |||||| |||| |||||||| ||| ||||||| |||
Sbjct 501 GCATCATTTCGGATTATCCAAC-ATTGCTTGTAGCAGATGCTGA-AAATTCACTTGGTCC 558
Query 1479 CAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTGTGATTGTATC 1538
|||||||| ||| ||| ||| |||||||||||||||||||||||| ||| |||||| ||
Sbjct 559 CAAGCTTCTGTTGATGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTC 618
Query 1539 TACAGTTCCTAAAATTTTGGGAAAGAAAGGGGACAAAACTATCAGCATATACTATGATAT 1598
|| |||||||||||| || |||| |||||||||||||| |||| ||| ||||||||||||
Sbjct 619 TAAAGTTCCTAAAATCTTAGGAATGAAAGGGGACAAAAGTATCGGCAGATACTATGATAT 678
Query 1599 CGTCAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAATTATGTCATTCTTT 1658
|||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||
Sbjct 679 CGTCAAAGAGATTATAGAAGCGGATAAGAGCTCCAAGTTCGAAAAGCTGTGTCATTCTTT 738
Query 1659 TCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGT-TTCGGTTCTGAGAGAGTTAG 1717
|| |||||||||| | |||||| || ||||| ||||| || |||| ||||||| || |
Sbjct 739 GCCTGAGGGTAGTAAGCAGGAGAATAAAATCAGGAATGTATT-GGTTTTGAGAGATTTGG 797
Query 1718 GTGTGCCTCAGAGGGTT-TTATTCTCCTTGCTCATATCTGATCACCAAC-CTGTCTGTGG 1775
|||||||||| ||| || |||||||| |||||| | ||| ||||||| ||| ||||||
Sbjct 798 GTGTGCCTCAAAGG-TTGTTATTCTCATTGCTCTTCTCTAATCACCATGTCTG-CTGTGG 855
Query 1776 AAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCGACCAC 1835
||||||||| ||||||||||||||||| || ||||||| ||||||||||||||| |||||
Sbjct 856 AAAAGAAAAGTTTGAAGAATCACTCAACAAGGTTGTTGGGATGGGTTTTGATCCCACCAC 915
Query 1836 CTC-AAAGTTTGTCGAAGCTCTAAACGTTGTTTATAGACTGAGCGACGAAACAATAGAAG 1894
|| ||||||||| |||||| || | ||||||| || |||||||| ||| | ||||||
Sbjct 916 -TCCAAAGTTTGTGGAAGCTTTATGCATTGTTTACGGATTGAGCGACAAAAGACTAGAAG 974
Query 1895 AAAAAGTT-AGTGTCTGTAA-AGGGTTAGGTTTTTCTGTTGGA-GATGTATGGGAAATGT 1951
|||| || | ||||| || || || || || |||| | |||||||||||| | |
Sbjct 975 AAAAC-TTCAATGTCTACAAGAGATTT-GGCTTAACTGTAA-ACGATGTATGGGAACTTT 1031
Query 1952 TCAAGAAGTGGCCTTGC-TTTCTCA-ATAACTCGGAGAAGAAGATAAGTCAAACATTTGA 2009
|||||||||| ||| || ||||| ||| ||| ||||| | ||||| ||| ||||||||
Sbjct 1032 TCAAGAAGTGCCCT-GCCTTTCTTGGATA-CTCTGAGAATAGGATAATTCAGACATTTGA 1089
Query 2010 AACCCTGAAGAAGTGTGGACTACCCGAAGACGAGGTCCTCTCACTGTTGAAGAAGTTTCC 2069
| || | |||| |||||| || |||||| ||||| | ||| |||| |||||| |||
Sbjct 1090 AGCCTTAAAGAGGTGTGGTCTGTGCGAAGATGAGGTATTGTCAGTGTTCAAGAAGAATCC 1149
Query 2070 ACAATGCATTAACG--CTTCAGAGCAGAAGATTTTGAACACCATTGAAACATTTCTAGAC 2127
|| |||| ||| || ||||||||||| |||| |||||| |||| ||||||||| ||| |
Sbjct 1150 ACTATGC-TTA-CGTGCTTCAGAGCAGCAGATATTGAACTCCATGGAAACATTTATAGGC 1207
Query 2128 CTAGGATTTAGCAGAGATGAGTTTG-CAATGATAGCCAAGCGCTTTCCTCCA-TGCCTT- 2184
||||||| |||||||||||||||| || |||| | |||| || |||||| | ||| ||
Sbjct 1208 TTAGGATTCAGCAGAGATGAGTTTGTCA-TGATGGTCAAGTGCCTTCCTC-AGTGCATTG 1265
Query 2185 -ATTTTATCTGCAGCGACGGTGAAGAAGAAGACTGAGTTTGTGGTAAAGAAGATGAATTG 2243
|| || |||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1266 GATATT--CTGCAGAGATGGTGAAGAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTG 1323
Query 2244 GCCACTAAAGG-C-TGTGGTTTCAACCCCTGC-GGTACTTGGATACAGCCTCGAGAAGAG 2300
|||||| |||| | | | ||| ||| | | |||||||||||| ||| | ||||||||
Sbjct 1324 GCCACTTAAGGTCAT-TACTTTGTTCCC-T-CAGGTACTTGGATATAGCATGGAGAAGAG 1380
Query 2301 GACTGTACCCA-GGTGTAATGTAATTAAAGCTCTCATGTCAAAAGGATTGCCCGGAAGTG 2359
|||||| |||| ||||||||||||| |||||||||||||| |||||||||| ||||| |
Sbjct 1381 GACTGT-CCCAAGGTGTAATGTAATCAAAGCTCTCATGTCCAAAGGATTGCTTGGAAGCG 1439
Query 2360 AACTGCCTCCAATGTCGTCTGTTTTGGTATG 2390
|||| ||||||||| |||||||||||| |||
Sbjct 1440 AACTCCCTCCAATGGCGTCTGTTTTGGCATG 1470
Score = 761 bits (412), Expect = 0.0
Identities = 705/841 (84%), Gaps = 41/841 (5%)
Strand=Plus/Plus
Query 6 TTCTCTGA-TT-CTCCATGG-AAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTGAG 62
|||||| | || || ||||| || || ||||||||||||||||||| ||||| |||| ||
Sbjct 184 TTCTCT-AGTTCCT-CATGGTAA-AAGGTTGGTCCAGTTTCAGAAAGGGCGTGACTTTAG 240
Query 63 GGTTTCGGTGAATCTTTTCCAAAATGGA---TCTGCTTTTTCCAATTCCTTCTCCTCCGC 119
||||| ||||| ||||| ||||||| | |||| |||||||||||| ||||| || |
Sbjct 241 TGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGTTTTTTCCAATTCATTCTCTTCTGT 300
Query 120 TGCTAGTGCTTCTGATGTGAGTC-CTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTCT 178
||||| |||| |||||||||| | ||||| | |||||||||| ||||||||||| ||||
Sbjct 301 TGCTACTGCTGCTGATGTGAG-CTTTAGAGATAGTCGAAAAGGTAACAACTTTACTGTCT 359
Query 179 CTTACCTCGTTGATTCATTGGGTTTA-CCTAACAAGCTCGCAGAATCTATTTCAAGGAAA 237
|||||||||||||||||||||||||| | | | |||||||||||||| || || | ||||
Sbjct 360 CTTACCTCGTTGATTCATTGGGTTTAGCTTCA-AAGCTCGCAGAATCGATCTCGATGAAA 418
Query 238 GTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTT-TTGAGAAGTCATGG 296
||||| |||||| ||||||||||||||| | | |||||||||||| || ||||||||||
Sbjct 419 GTCAGTTTCGAGAACAAGGGCAATCCTGATACAGTTCTGAATCTTCTT-AGAAGTCATGA 477
Query 297 GTTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCC-ACTATTGCTTATAGCTG 355
||||||||||||||||||||| ||||||||| |||||||||| || ||||||| |||| |
Sbjct 478 GTTCACAGATTCTCAGATCTCCAGCATCATTTCGGATTATCCAAC-ATTGCTTGTAGCAG 536
Query 356 ATGCTGACAAA-TCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGC 414
||||||| ||| ||||||||||||||||||| ||| ||||||| |||||||||||||||
Sbjct 537 ATGCTGA-AAATTCACTTGGTCCCAAGCTTCTGTTGATGCAGTCTAGAGGAGCTTCAAGC 595
Query 415 TCTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGA-AA 473
|||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||| ||
Sbjct 596 TCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTTAGGAATGAAAG-GGGACAA 654
Query 474 ATCTATCAGC-GCATACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCA 532
| |||| || | |||||||||| ||||||||| ||||||||||| |||||||| ||||
Sbjct 655 AAGTATCGGCAG-ATACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGCTCCA 713
Query 533 ATTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAA 592
| || | || | | |||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 714 AGTTCGAAAAGCTGTGTCATTCTTTGCCTGAGGGTAGTAAGCAGGAGAATAAAATCAGGA 773
Query 593 ATGTTTTGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTCTA 651
|||| |||||||||||||| ||||| |||||||| ||| || |||||||||||||| ||
Sbjct 774 ATGTATTGGTTTTGAGAGATTTGGGTGTGCCTCAAAGG-TTGTTATTCTCATTGCT-CT- 830
Query 652 TC-CGA-TGGCAGACATGT-T--TGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGG 706
|| | | | || ||||| | |||||||||||||| ||| ||||||||||||| ||||
Sbjct 831 TCTCTAAT--CAC-CATGTCTGCTGTGGAAAAGAAAAGTTTGAAGAATCACTCAACAAGG 887
Query 707 TAGTTAAGATTGGTTTTGATCCAACCACCTC-AACGTTTGTCGAAGCTCTCAAGG-TTCT 764
| ||| ||| ||||||||||| ||||| || || |||||| |||||| | | | || |
Sbjct 888 TTGTTGGGATGGGTTTTGATCCCACCAC-TCCAAAGTTTGTGGAAGCTTT-ATGCATTGT 945
Query 765 TTACACATTGAGCGACAAAGGAATTGAAAGTAAA-TTCAATGCCTGTAAAAGGTTAGGCT 823
|||| ||||||||||||| || | ||| | ||| ||||||| || || || || ||||
Sbjct 946 TTACGGATTGAGCGACAAAAGACTAGAA-GAAAACTTCAATGTCTACAAGAGATTTGGCT 1004
Query 824 T 824
|
Sbjct 1005 T 1005
Score = 226 bits (122), Expect = 8e-58
Identities = 248/304 (82%), Gaps = 27/304 (9%)
Strand=Plus/Plus
Query 837 TTCTGAGAAGAAGATAGAGAACTCCATTGAAACATTTCTAGGTC-TAGGATTCACCAGAG 895
||| ||| || ||||| ||||||||| ||||||||| |||| | ||||||||| |||||
Sbjct 1165 TTCAGAGCAGCAGATATTGAACTCCATGGAAACATTTATAGG-CTTAGGATTCAGCAGAG 1223
Query 896 ATGAGTTTTTGATGATGGTCAAGCGGTTTCCTCAGTGCATTGGATA-T-T-C-------- 944
|||||||| | |||||||||||| | ||||||||||||||||||| | | |
Sbjct 1224 ATGAGTTTGTCATGATGGTCAAGTGCCTTCCTCAGTGCATTGGATATTCTGCAGAGATGG 1283
Query 945 -G-A-CAG-AG--T-A--TT-TGGTGAAGGAGATGAATTGGCCACTTAAGGCT-GTGGCT 993
| | || || | | || |||||||| ||||||||||||||||||||| | | ||
Sbjct 1284 TGAAGAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTTAAGG-TCATTACT 1342
Query 994 TCAATCCCTCAGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTA 1053
| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 1343 TTGTTCCCTCAGGTACTTGGATATAGCATGGAGAAGAGGACTGTCCCAAGGTGTAATGTA 1402
Query 1054 ATCAAAGCTCTCATGTCAAAAGGATTG-TTCGGAAGTGAACTCCCTCCAATATCATCTGT 1112
||||||||||||||||| ||||||||| || ||||| |||||||||||||| | |||||
Sbjct 1403 ATCAAAGCTCTCATGTCCAAAGGATTGCTT-GGAAGCGAACTCCCTCCAATGGCGTCTGT 1461
Query 1113 TTTG 1116
||||
Sbjct 1462 TTTG 1465
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 1026 bits (555), Expect = 0.0
Identities = 754/848 (89%), Gaps = 22/848 (3%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTG 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct 141 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTGCAGAAATGGCGCCATTTG 200
Query 61 AGGGTTTCGGTGAATCTTTTCCAAAATGGATCTGCTTTTTCCAATTCCTTCTCCTCCGCT 120
|||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||| ||
Sbjct 201 AGGGTTTCAGTGAATCTTTTTCAAAATGGATCAGCTTTTTCCAATACCTTCTCCTCCTCT 260
Query 121 GCTAGTGCTTCTGATGTGAG-TCCTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTCTC 179
|||| |||| |||||||||| || |||| |||||||||||| ||||||||||||| ||
Sbjct 261 GCTATTGCTGCTGATGTGAGCTCA-AGAGATGGTCGAAAAGGTCACAACTTTACAGTTTC 319
Query 180 TTACCTCGTTGATTCATTGGGTTTACCTA-ACAAGCTCGCAGAATCTATTTCAAGGAAAG 238
|||||||||||||||||| |||||| ||| | ||| |||| ||||| || || | |||||
Sbjct 320 TTACCTCGTTGATTCATTAGGTTTAGCTACAAAAG-TCGCTGAATCGATCTCCATGAAAG 378
Query 239 TCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGTCATGGGT 298
|||| ||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||
Sbjct 379 TCAGTTTCGATAACAAGGGCAACCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGT 438
Query 299 TCACAGATTCTCAGATCTC-AAGCATCATTACGGA-TTATCC-ACTATTGCTTATAGCT- 354
|||| |||||||||||||| || |||||||| ||| || ||| | ||||||||| ||
Sbjct 439 TCACTGATTCTCAGATCTCCAA-CATCATTA-GGACTT-TCCCAAGATTGCTTATC-CTA 494
Query 355 GATGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGC 414
|||||||| ||||| |||| |||||||||||||||| ||||||||| ||| |||||||||
Sbjct 495 GATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCTTCAAGC 554
Query 415 TCTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGA-AAGAGGGAAA 473
||||||||||| |||| ||||||||||||||||||||| ||||| |||| || |||| ||
Sbjct 555 TCTGAGCTCACCGAGACTGTTTCTGCAGTTCCGAAAATATTGGGGAAGAGAA-AGGGCAA 613
Query 474 ATCTATCAGC-GCATACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCA 532
|||| ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 614 ATCTCTCAGCAG-ATACTATGATTTCGTCAAAGTCATTATAGAAGCGGATAAGAGTTCCA 672
Query 533 ATTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAA 592
| || | || | ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 673 AGTTAGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAA 732
Query 593 ATGTT-TTGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTCT 650
|| || ||||| ||||||||| |||| |||||||||||| || ||||||||||||||| |
Sbjct 733 AT-TTATTGGTGTTGAGAGAAATGGGTGTGCCTCAGAGG-TTGTTATTCTCATTGCTTAT 790
Query 651 ATCCGATGGCAGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGG-TAG 709
|||||||| | || |||||||||| ||||||||||||||||||||||||||||||| | |
Sbjct 791 ATCCGATGCCGGAGATGTTTGTGGTAAAGAAAAATTTAAAGAATCACTCAAGAAGGCT-G 849
Query 710 TTAAGATTGGTTTTGATCCAACCACCTCAACGTTTGTCGAAGCTCTCAAGGTTCTTTACA 769
|| ||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||
Sbjct 850 TTGAGATTGGTTTTGATCCAACCACCGCAACTTTTGTCAAAGCTCTTAACGTTCTTTACG 909
Query 770 CATTGAGCGACAAAGGAATTGAAAGTAAATTCAATGCCTGTAAAAGGTTAGGCTTGGCTG 829
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 910 GATTAAGCGACAAAGGAATTGAAAATAAATTCAATGCCTGTAAAAGGTTAGGCTTGGCTG 969
Query 830 TGGGCGAT 837
||| ||||
Sbjct 970 TGGACGAT 977
Score = 756 bits (409), Expect = 0.0
Identities = 735/887 (83%), Gaps = 43/887 (5%)
Strand=Plus/Plus
Query 1132 AAGTTGGTCCAGTTGCAGAAATGGCGTCATTTGAGAGTTTCAGTGAA-CCTTCTCGAAAA 1190
|||||||||||||||||||||||||| |||||||| ||||||||||| | || || ||||
Sbjct 168 AAGTTGGTCCAGTTGCAGAAATGGCGCCATTTGAGGGTTTCAGTGAATCTTTTTC-AAAA 226
Query 1191 -GCCATCTCCTTTTCCCAATTCC-T-T-CTCCTATGCTACTGCTACAGATGCGAGCCT-T 1245
| ||| ||||| ||||| || | | ||||| ||||| |||| | |||| ||| ||
Sbjct 227 TG-GATCAGCTTTTTCCAATACCTTCTCCTCCTCTGCTATTGCTGCTGATGTGAG-CTCA 284
Query 1246 AGAGCTGGTCGAAAAAGGT-TGAATTTTTCTGTCTCTTACCTCGTTGCTTCATTGGGTTT 1304
|||| |||||| ||||||| || ||| | || ||||||||||||| |||||| |||||
Sbjct 285 AGAGATGGTCG-AAAAGGTCACAACTTTACAGTTTCTTACCTCGTTGATTCATTAGGTTT 343
Query 1305 AACTA-AAGAAGTCGCAGAATCGATCTCAAGGAAAGTCTGTTTGGTTGACAAGGGCAATC 1363
| ||| || ||||||| ||||||||||| | ||||||| |||| | | |||||||||| |
Sbjct 344 AGCTACAA-AAGTCGCTGAATCGATCTCCATGAAAGTCAGTTTCGATAACAAGGGCAACC 402
Query 1364 CTGATTCTGTTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAGATCTCCACCA 1423
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||
Sbjct 403 CTGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCCAACA 462
Query 1424 TCGTTACGGA-TTATCCACAA--TTGCTAATAGCT-GATGCTGAGAAATCACTTGCTCCC 1479
|| ||| ||| || ||| ||| ||||| || || |||||||||||||| |||||||||
Sbjct 463 TCATTA-GGACTT-TCC-CAAGATTGCTTATC-CTAGATGCTGAGAAATCCCTTGCTCCC 518
Query 1480 AAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTGTGATTGTATCT 1539
|||||||||||||||| ||||| ||| |||||||||||||||||| | | || ||| |||
Sbjct 519 AAGCTTCAGTTTCTGCAGTCCATAGGTGCTTCAAGCTCTGAGCTCACCGAGACTGTTTCT 578
Query 1540 ACAGTTCCTAAAATTTTGGG-AA-AGAAAGGGGACAAAACTATCAGCATATACTATGATA 1597
||||||| ||||| ||||| || |||||||| |||| || |||||| ||||||||||
Sbjct 579 GCAGTTCCGAAAATATTGGGGAAGAGAAAGGG--CAAATCTCTCAGCAGATACTATGATT 636
Query 1598 TCGTCAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAATTATGTCATTCTT 1657
||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 637 TCGTCAAAGTCATTATAGAAGCGGATAAGAGTTCCAAGTTAGAAAAGTTATGTCATTCTT 696
Query 1658 TTCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGT-TTCGGT-TCTGAGAGAGTT 1715
| ||| |||||||||| | ||||||||| ||||||||| | || ||| | ||||||| |
Sbjct 697 TGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAAATTTATT-GGTGT-TGAGAGAAAT 754
Query 1716 AGGTGTGCCTCAGAGGGTT-TTATTCTCCTTGCTCATATCTGATCACCA-ACCTGTCTGT 1773
||||||||||||||| || |||||||| ||||| ||||| ||| || | ||| |||
Sbjct 755 GGGTGTGCCTCAGAGG-TTGTTATTCTCATTGCTTATATCCGATG-CCGGAGATGTTTGT 812
Query 1774 GGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCGACC 1833
|| |||||||| ||| |||||||||||||||| | ||||||||| ||||||||||| |||
Sbjct 813 GGTAAAGAAAAATTTAAAGAATCACTCAAGAAGGCTGTTGAGATTGGTTTTGATCCAACC 872
Query 1834 ACCTCAAAGTTTGTCGAAGCTCTAAACGTTGTTTATAGACTGAGCGACGAAAC-AATAGA 1892
||| ||| |||||| ||||||| |||||| |||| || | |||||| ||| ||| ||
Sbjct 873 ACCGCAACTTTTGTCAAAGCTCTTAACGTTCTTTACGGATTAAGCGAC-AAAGGAATTGA 931
Query 1893 AGAA-AAAGTT-AGTGTCTGTAAAGGGTTAGGTTTTTCTGTTGGA-GATGTATGGGAAAT 1949
| || ||| || | || ||||||| ||||||| || |||| ||| |||||||||| |||
Sbjct 932 A-AATAAA-TTCAATGCCTGTAAAAGGTTAGGCTTGGCTGT-GGACGATGTATGGGCAAT 988
Query 1950 GTTCAAGAAGTGGCCTTGCTTTCTCA-ATAACTCGGAGAAGAAGATA 1995
||||||||||||||| | |||| | | || || ||||||||||||
Sbjct 989 GTTCAAGAAGTGGCCAAACATTCTGACA-AAGTCTGAGAAGAAGATA 1034
Score = 351 bits (190), Expect = 1e-95
Identities = 277/315 (88%), Gaps = 21/315 (7%)
Strand=Plus/Plus
Query 838 TCTGAGAAGAAGATAGAGAACTCCATTGAAACATTTCTAGGTCTAGGATTCACCAGAGAT 897
|||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||
Sbjct 1020 TCTGAGAAGAAGATAGAGAACTCCGTTGAAACATTTCTAGGCCTAGGATTCAGCAGAGAT 1079
Query 898 GAGTTTTTGATGATGGTCAAGCGGTTTCCTCAGTGCATTGGATA-T-T-C---------- 944
||||||||||||||||||||||| || ||||||||||||||||| | | |
Sbjct 1080 GAGTTTTTGATGATGGTCAAGCGATTCCCTCAGTGCATTGGATATTCTACAGAGTTGATG 1139
Query 945 --GAC--AGAGT-A--TT-TGGTGAAGGAGATGAATTGGCCACTTAAGGCTGTGGCTTCA 996
||| ||| | | || |||||| |||||||||||||||||| |||||||||||||||
Sbjct 1140 AAGACGAAGACTGAGTTTCTGGTGACGGAGATGAATTGGCCACTAAAGGCTGTGGCTTCA 1199
Query 997 ATCCCTCAGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTAATC 1056
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1200 ATCCCTCAGGTACTCGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATC 1259
Query 1057 AAAGCTCTCATGTCAAAAGGATTGTTCGGAAGTGAACTCCCTCCAATATCATCTGTTTTG 1116
|||| |||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct 1260 AAAGTTCTCATCTCAAAAGGATTGCTCGAAAGTGAACTCCCTCCAATATCCTCTGTTTTG 1319
Query 1117 ACAAGTCCCAGGGAG 1131
|||||| |||| |||
Sbjct 1320 ACAAGTACCAGTGAG 1334
> AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902150-22903837 FORWARD
LENGTH=1688
Length=1688
Score = 918 bits (497), Expect = 0.0
Identities = 1048/1302 (80%), Gaps = 86/1302 (7%)
Strand=Plus/Plus
Query 1124 CCA-GGGAGAA-GTTGGTCCAGTTGCAGAAA-TGGCGTCATTTGAGAGTTTCAGTGAACC 1180
||| || |||| |||||||||||| |||||| || | | |||| ||||||||| |
Sbjct 107 CCATGGAAGAAGGTTGGTCCAGTTACAGAAATTGTC-TAATTTCAGAGTTTCA--G---- 159
Query 1181 TTCTCGAAAAGC-CATCTCCTTT-TCCCAATTCCTTCTCCTATGCTACTGCTACAGATGC 1238
| || |||| | |||| |||| | ||||||||||||| | ||||| || | | |||||
Sbjct 160 -T-TC-AAAA-CGGATCTGCTTTGT-CCAATTCCTTCTCTTTTGCTAGTGTTGCTGATGC 214
Query 1239 GAGCCTTAGAGCTGGTCGAAAAAGGT-TGAATTTTTCTGTCTCTTACCTCGTTGCTTCAT 1297
|| ||||| || | | | |||||| || ||| | ||||||||||| |||| |||||
Sbjct 215 GACCCTTATAGATAG-CCTTAAAGGTAACAACTTTACAGTCTCTTACCTAGTTGATTCAT 273
Query 1298 TGGGTTTAACTAAAGAAG-TCGCAGAATCGATCT-CAAGGAAAGTCTGTTTGGTTGACAA 1355
|||||||||| | | ||| ||||||||||||||| ||| |||||| | || | || |
Sbjct 274 TGGGTTTAACCACA-AAGCTCGCAGAATCGATCTCCAA-GAAAGTAAGCTTCGAGGA-GA 330
Query 1356 GG-GCAATCCTGATTCTGTTCTGAGTCTT-TTGAGAAGTTATGCGTTCACTGATTCTCAG 1413
|| | ||||| |||||||||||||||||| || | |||||||| |||||| | ||||||
Sbjct 331 GGAGAAATCCGGATTCTGTTCTGAGTCTTCTT-ACAAGTTATGGGTTCACAAAGTCTCAG 389
Query 1414 ATCTCCACCATCGTTACGGAT-TATCCACAATTGCTAATAGC--T-GATGCTGAGAAAT- 1468
|| || | ||| |||| || || |||| |||||| | || | |||||||||||||
Sbjct 390 ATTTCAAGTATCATTAC-TATCTACCCACGATTGCT--T-GCATTAGATGCTGAGAAATC 445
Query 1469 CACTTGCTCCCAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTG 1528
|| |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||
Sbjct 446 CA-TTGCTCCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTC 504
Query 1529 TGATTGTATCTACAGTTCCTAAAATTTTGGGAAAGAAAGGGGACAAAACTATCAGCA-TA 1587
|||||| ||||| ||||||||||| ||||| |||| |||| ||||| |||| | | ||
Sbjct 505 AGATTGTTTCTACTGTTCCTAAAATCTTGGGGAAGAGAGGGCACAAATCTATAA-CTGTA 563
Query 1588 TACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTT-CGAAAAATT 1646
||||||||| |||||||||| ||||||||||| ||||||||||| | ||| |||||| ||
Sbjct 564 TACTATGATTTCGTCAAAGACATTATAGAAGCTGATAAGAGTTCTA-GTTACGAAAAGTT 622
Query 1647 ATGTCATTCTTTTCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGTTTCGGTTCT 1706
||||||||||||||||||||||| || | |||| |||||||||||| | || ||| |
Sbjct 623 ATGTCATTCTTTTCCACAGGGTAACAA---GAAGAATAAGATCAGAAATATCTCTGTTTT 679
Query 1707 GAGAGAGTTAGGTGTGCCTCAGAGGGTT-TTATTCTCCTT-GCTCATATCTGATCACCAA 1764
|||||| || |||||| ||||| | || |||||| |||| |||||| || ||| ||||
Sbjct 680 GAGAGAATTGGGTGTGGCTCAGCGT-TTGTTATTC-CCTTTGCTCATCTCAGATGGCCAA 737
Query 1765 CCTGTCTGTGGAAAAGAAA-ATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTT 1823
||||||||||| ||||||| |||| |||||||| |||||||| |||||||||||||||||
Sbjct 738 CCTGTCTGTGGTAAAGAAAGATTT-GAAGAATCTCTCAAGAAGGTTGTTGAGATGGGTTT 796
Query 1824 TGATCCG-ACCACCT-CAAAGTTTGTCGAAGCTCTAA-ACGTTGTTTATAG-ACTGAGCG 1879
||||||| | || | ||||||| || |||||||| | ||| |||| | | |||| |
Sbjct 797 TGATCCGGAG-AC-TACAAAGTTCGTTGAAGCTCTGCGA-GTTATTTACCGTA-TGAGTG 852
Query 1880 ACGAAACAATAGAAGAAAAAGTTAGTGTCTGTAAAGGGTTAGGTTTTTCTGTTGGA-GAT 1938
|| ||||||||||||||||||| | ||||| ||| ||||||| ||| ||| || |||
Sbjct 853 ACAAAACAATAGAAGAAAAAGTCAATGTCTACAAAAGGTTAGGCTTTGGTGT-GGCTGAT 911
Query 1939 GTATGGGAAATGTTCAAGAAGTGGCCTTGCTTTCT---CAATAACTCGGAGAAGAAGATA 1995
||||||| ||| |||||||||||||||| |||| | || || ||| ||||||||||||
Sbjct 912 GTATGGGCAATCTTCAAGAAGTGGCCTT-CTTTTTTGTCA-TA-CTCAGAGAAGAAGATA 968
Query 1996 AGTCAAACATTTGAAACCCTGAAGAAGT-GTGGACTACCCGAAGACGAGGTCCTCTCACT 2054
| ||| || ||||||||||| |||| || |||| || | || |||||||||| | | |
Sbjct 969 ACTCATACTTTTGAAACCCTTAAGA-GTTGTGGTCTGCTTAAACACGAGGTCCTGTTATT 1027
Query 2055 GTTGAAGAAGTTTCCACAATGCATTAACGCTTCAGAGCAGAAGATTTTGAACACCATTGA 2114
|||||||||| |||| |||||||| ||||||||||||||||| ||||| |||| ||
Sbjct 1028 GTTGAAGAAGCATCCAAAATGCATTTGTTCTTCAGAGCAGAAGATTGTGAACTCCATAGA 1087
Query 2115 AACATTTCT-AGACCTAGGATTTAGCAGAGATGAGTTTGCAATGATAGCCAAGCGCTTTC 2173
|||||| || || ||||||||| ||||||||||||||||| ||||| | |||||| | ||
Sbjct 1088 AACATT-CTTAGGCCTAGGATTCAGCAGAGATGAGTTTGCGATGATGGTCAAGCGATATC 1146
Query 2174 CTCCA-TGCCTT-ATTTTATCTGCAGCGACGGTGAAGAAGAAGACTGAGTTTGTGGTAAA 2231
||| | ||| || | | || |||| | ||| ||||||||||| ||||||||| | || ||
Sbjct 1147 CTC-AGTGCATTGACTATA-CTGCTGAGACAGTGAAGAAGAAAACTGAGTTTATTGTGAA 1204
Query 2232 GAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAACCCCTGC-GGTACTTGGATACAGCC 2290
||| ||||||||||||||| ||||| ||||||| | |||| | |||| ||||||||||||
Sbjct 1205 GAATATGAATTGGCCACTAGAGGCTTTGGTTTCGATCCCT-CAGGTATTTGGATACAGCC 1263
Query 2291 TCGAGAAGAGGACTGTACCCA-GGTGTAATGTAATTAAAGCTCTCATGTCAAAAGGA-T- 2347
| |||||||| ||||| |||| ||||||||||||| ||| ||||||| ||||||||| |
Sbjct 1264 TGGAGAAGAGAACTGT-CCCAAGGTGTAATGTAATCAAAACTCTCATCTCAAAAGGACTG 1322
Query 2348 -TGCC---CGGAAGTGAA-CTGCCTCCAATGTCGTCTGTTTT 2384
|| |||||||||| | ||||||||||| ||||||||
Sbjct 1323 ATGAAAGACGGAAGTGAAGCC-CCTCCAATGTCATCTGTTTT 1363
Score = 580 bits (314), Expect = 2e-164
Identities = 687/857 (80%), Gaps = 65/857 (8%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAA-TGGCGTCACTT 59
|||||| ||||||| | ||||||||||| |||||||||||| |||||| || | | | ||
Sbjct 90 ATGTATGCTCTGATACACCATGGAAGAAGGTTGGTCCAGTTACAGAAATTGTC-TAATTT 148
Query 60 GAGGGTTTCGGTGAATCTTTTCCAAAATGGATCTGCTTTTTCCAATTCCTTCTCCTCCGC 119
|| ||||| | || ||||| ||||||||||| ||||||||||||| ||
Sbjct 149 CAGAGTTTC-----A---GTT-CAAAACGGATCTGCTTTGTCCAATTCCTTCT-CT--TT 196
Query 120 TGCTAGTGCTT-CTGATGTGAGTCC-TAGAGTTGGTCGAAAAGGAAACAACTTTACAGTC 177
|||||||| || |||||| || || || || | | | ||||| |||||||||||||||
Sbjct 197 TGCTAGTG-TTGCTGATGCGA-CCCTTATAGATAGCCTTAAAGGTAACAACTTTACAGTC 254
Query 178 TCTTACCTCGTTGATTCATTGGGTTT-ACCTAAC-AAGCTCGCAGAATCTAT-TTCAAGG 234
|||||||| ||||||||||||||||| ||| || |||||||||||||| || | ||| |
Sbjct 255 TCTTACCTAGTTGATTCATTGGGTTTAACC--ACAAAGCTCGCAGAATCGATCTCCAA-G 311
Query 235 AAAGTCAGCTTCGAGGACAAGG-GCAATCCTGTTTCTGTTCTGAATCTT-TTGAGAAGTC 292
||||| ||||||||||| ||| | ||||| | ||||||||||| |||| || | ||||
Sbjct 312 AAAGTAAGCTTCGAGGA-GAGGAGAAATCCGGATTCTGTTCTGAGTCTTCTT-ACAAGTT 369
Query 293 ATGGGTTCACAGATTCTCAGATCTCAAGCATCATTACGGAT-TATCCACTATTGCTTATA 351
||||||||||| | |||||||| ||||| |||||||| || || |||| ||||||| |
Sbjct 370 ATGGGTTCACAAAGTCTCAGATTTCAAGTATCATTAC-TATCTACCCACGATTGCTTGCA 428
Query 352 GCT-GATGCTGACAAAT-CACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTT 409
| |||||||| |||| || ||| |||||||||||||| | ||||||||||||||||||
Sbjct 429 -TTAGATGCTGAGAAATCCA-TTGCTCCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTT 486
Query 410 CAAGCTCTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGG 469
||||||||||||||||| ||||||||||| | ||||| ||||||||||| |||| ||||
Sbjct 487 CAAGCTCTGAGCTCACTCAGATTGTTTCTACTGTTCCTAAAATCTTGGGGAAGA--GAGG 544
Query 470 G-A-AAATCTATCAGC-GCATACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGA 526
| | |||||||| | | | |||||||||||||||||||| |||||||||||| |||||||
Sbjct 545 GCACAAATCTATAA-CTGTATACTATGATTTCGTCAAAGACATTATAGAAGCTGATAAGA 603
Query 527 GTTCCAATTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAA 586
|||| | || | || | ||||||||||||| ||| |||||| ||| | ||||||| |
Sbjct 604 GTTCTAGTTACGAAAAGTTATGTCATTCTTTTCCACAGGGTAACAAG-A--AGAATAAGA 660
Query 587 TTAGAAATGTTT-TGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATT 644
| |||||| | | || |||||||||||||||| ||| ||||| | || |||||| | ||
Sbjct 661 TCAGAAATATCTCTG-TTTTGAGAGAATTGGGTGTGGCTCAGCGT-TTGTTATTCCCTTT 718
Query 645 GCTTCTATC-C-GATGGC-AGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAA 701
||| | ||| | |||||| | || ||| ||||| ||||||| |||| ||||||| |||||
Sbjct 719 GCT-C-ATCTCAGATGGCCA-ACCTGTCTGTGGTAAAGAAAGATTTGAAGAATCTCTCAA 775
Query 702 GAAGGTAGTTAAGATTGGTTTTGATCCA-ACCACCT-CAACGTTTGTCGAAGCTCT-CAA 758
|||||| ||| |||| ||||||||||| | || | ||| ||| || |||||||| | |
Sbjct 776 GAAGGTTGTTGAGATGGGTTTTGATCCGGAG-AC-TACAAAGTTCGTTGAAGCTCTGCGA 833
Query 759 GGTTCTTTACACAT-TGAGCGACAAAGGAATTGAAAGTAAAT-TCAATGCCTGTAAAAGG 816
| || ||||| | | |||| |||||| ||| ||| | ||| |||||| || ||||||
Sbjct 834 G-TTATTTAC-CGTATGAGTGACAAAACAATAGAA-GAAAAAGTCAATGTCTACAAAAGG 890
Query 817 TTAGGCTT-GGCTGTGG 832
|||||||| || |||||
Sbjct 891 TTAGGCTTTGG-TGTGG 906
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 761 bits (412), Expect = 0.0
Identities = 741/892 (83%), Gaps = 53/892 (6%)
Strand=Plus/Plus
Query 1124 CCA-GGGAGAAG-TTGGTCCAGTTGCAGAAATGGCGTCATTTGAGAGTTTCAGTGAACCT 1181
||| || ||||| |||||| |||| ||||||||||||||||||||||||| ||||
Sbjct 135 CCATGGAAGAAGTTTGGTCGAGTTACAGAAATGGCGTCATTTGAGAGTTTTAGTG----- 189
Query 1182 TCTCGAAAAGCCATCTCCTTT-TCCCAATTCCTTCTCCTATGCTACTGCTACAG-ATGCG 1239
| ||||| | |||||||| | ||||||||||||||| |||| ||||| | | | |
Sbjct 190 ---C-AAAAGGCGTCTCCTTTGT-CCAATTCCTTCTCCTCTGCTTCTGCTGC-GCGTTTG 243
Query 1240 AG-CCTTAGAGCTGGTCGAAAAAGGT-TGAATTTTTCTGTCTCTTACCTCGTTGCTTCAT 1297
|| || ||||| |||||| ||||||| || ||| | |||||||||||||||| |||||
Sbjct 244 AGTCC-TAGAGTTGGTCG-AAAAGGTAAGAGCTTTACAGTCTCTTACCTCGTTGATTCAT 301
Query 1298 TGGGTTTAACTAAAGAAG-TCGCAGAATCGATCTCAAGGAAAGTCT-GTTTGGTTGACAA 1355
|||||||| | ||| ||| |||| |||||| |||||||||| || | | || | |||||
Sbjct 302 TGGGTTTACCCAAA-AAGCTCGCTGAATCGGTCTCAAGGAAGGT-TAGCTTCGAGGACAA 359
Query 1356 GGGCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAGAT 1415
|| ||| ||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||
Sbjct 360 GGACAACCCTGACTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTGATTCTCAGAT 419
Query 1416 CTCCACCATCGTTACGGATTATCCACAATTGCTAATAGCTGATGCTGAGAAATCACTTGC 1475
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 420 CTCCACCATCGTTACGGATTATCCACAATTGCTTGTAGCTGATGCTGAGAAATCACTTGC 479
Query 1476 TCCCAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTGTGATTGT 1535
|||||||||||||||| ||| ||| |||||||||||||||||||||||| ||| ||||||
Sbjct 480 TCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGT 539
Query 1536 ATCTACAGTTCCTAAAATTTTGGGAAAGAAAGGGGACAAAACTATCAGCATATACTATGA 1595
||||||||||||||||| |||||||||| ||| |||||||||||||| ||| ||||||
Sbjct 540 TTCTACAGTTCCTAAAATCTTGGGAAAGAGAGGCCACAAAACTATCAGCGTATTCTATGA 599
Query 1596 TATCGTCAAAGAGA-TTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAATTATGTCATT 1654
| || ||||||| | || || | ||||||||||||||| |||||| | ||||||
Sbjct 600 TTTCATCAAAGAAACTT-TACTTG---ATAAGAGTTCCAAGTCCGAAAAGTCATGTCAAC 655
Query 1655 CTTTTCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGTT-TCGGTTCTGAGAGAG 1713
||||||||||||||| | |||||||||||||||||||||| || || ||| |||||||
Sbjct 656 CTTTTCCACAGGGTA--A-TCTGGAGAACAAGATCAGAAAT-TTATCTGTTTTGAGAGAA 711
Query 1714 TTAGGTG-TGCCTCAGAGGGTT-TTATTCTCCTTGCTCATATCT-GATCACCAACCTGTC 1770
|| || | ||||||| | | || |||||| |||||||||| ||| | | || |||||||
Sbjct 712 TTGGG-GATGCCTCACAAG-TTGTTATTCCCCTTGCTCATCTCTTG-TGACGTACCTGTC 768
Query 1771 TGT-GGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCC 1829
| | || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 769 T-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCC 827
Query 1830 GA-CCACCTCAAAGTTTGTCGAAGCTCTAAACGTTGTTTATAGACTGAGCGACGAAA-CA 1887
| |||||||||||||||| |||||| | ||||||| | ||| |||||||| ||| ||
Sbjct 828 -ATCCACCTCAAAGTTTGTGGAAGCTTTGTGCGTTGTTCAAAGATTGAGCGACAAAAACA 886
Query 1888 ATAGAAGAAAAAGTTAGTGTC-TGTAAAGGGTTAGGTTTTTCTGTTGGAG-ATGTATGGG 1945
||||||| ||||| | || | | |||| ||||||| ||| ||| ||| ||||||||
Sbjct 887 -TAGAAGATAAAGTCAATG-CGTATAAAAGGTTAGGCTTTGATGT-GGAATATGTATGG- 942
Query 1946 AAA-TGTTCAAGAAGTGGCCTTGCTTTCTCA-ATAACTCGGAGAAGAAGATA 1995
| | ||||||||| |||||| |||||| | | | ||||||||||||||||
Sbjct 943 ACAGTGTTCAAGAGGTGGCCAAACTTTCTGACACA-CTCGGAGAAGAAGATA 993
Score = 689 bits (373), Expect = 0.0
Identities = 700/850 (82%), Gaps = 54/850 (6%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAG-TTGGTCCAGTTTCAGAAATGGCGTCACTT 59
|||||||||||||||| ||||||||| ||| |||||| |||| |||||||||||||| ||
Sbjct 118 ATGTATTCTCTGATTCGCCATGGAAG-AAGTTTGGTCGAGTTACAGAAATGGCGTCATTT 176
Query 60 GAGGGTTTCGGTGAATCTTTTCCAAAATGG-ATCTGCTTTTTCCAATTCCTTCTCCTCCG 118
||| |||| | | | ||||| || ||| |||| ||||||||||||||||| |
Sbjct 177 GAGAGTTT---T--A----GTGCAAAA-GGCGTCTCCTTTGTCCAATTCCTTCTCCTCTG 226
Query 119 CTGCTAG-TGCTTCTGATGTGAGTCCTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTC 177
|| || | ||| | | | ||||||||||||||||||||||||| || | ||||||||||
Sbjct 227 CTTCT-GCTGC-GC-G-TTTGAGTCCTAGAGTTGGTCGAAAAGGTAAGAGCTTTACAGTC 282
Query 178 TCTTACCTCGTTGATTCATTGGGTTTACCTAACAAGCTCGCAGAATCTATTTCAAGGAAA 237
||||||||||||||||||||||||||||| || |||||||| ||||| | ||||||||
Sbjct 283 TCTTACCTCGTTGATTCATTGGGTTTACCCAAAAAGCTCGCTGAATCGGTCTCAAGGAAG 342
Query 238 GTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGTCATGGG 297
|| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||
Sbjct 343 GTTAGCTTCGAGGACAAGGACAACCCTGACTCTGTTCTGAATCTTTTGAGAAGTCATGGG 402
Query 298 TTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCCACTATTGCTTATAGCTGAT 357
||||| |||||||||||||| | |||| ||||||||||||||| ||||||| ||||||||
Sbjct 403 TTCACTGATTCTCAGATCTCCACCATCGTTACGGATTATCCACAATTGCTTGTAGCTGAT 462
Query 358 GCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCT 417
||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 463 GCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCT 522
Query 418 GAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGG-A-AAAT 475
||||||||||||||||||||| ||||||| |||||||||||||||| |||| | |||
Sbjct 523 GAGCTCACTGAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGA--GAGGCCACAAAA 580
Query 476 CTATCAGCGCATACTATGATTTCGTCAAAGTCA-TTATAGAAGCAGATAAGAGTTCCAAT 534
||||||||| || |||||||||| |||||| | || || | | ||||||||||||
Sbjct 581 CTATCAGCGTATTCTATGATTTCATCAAAGAAACTT-TACTTG-A--TAAGAGTTCCAAG 636
Query 535 TTGGGAAGGAT-ATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAAA 593
| | || | | |||||| |||| ||| |||||| | | |||||| || || |||||
Sbjct 637 TCCGAAAAG-TCATGTCAACCTTTTCCACAGGGTAAT---CTGGAGAACAAGATCAGAAA 692
Query 594 TGTT-T-TGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTCT 650
| || | || ||||||||||||||||| ||||||| | | || |||||| | ||||| |
Sbjct 693 T-TTATCTG-TTTTGAGAGAATTGGGGATGCCTCACAAG-TTGTTATTCCCCTTGCT-C- 747
Query 651 ATC-CGATG-G-CAG-ACATGT-TTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAG 705
||| | || | | | || ||| || || |||||||||||| ||||||| ||||||||
Sbjct 748 ATCTCT-TGTGAC-GTACCTGTCTTC-GGTAAAGAAAAATTTGAAGAATCCCTCAAGAAA 804
Query 706 GTAGTTAAGATTGGTTTTGATCCAACCACCTCAACGTTTGTCGAAGCTCTCAAG-GTTCT 764
|| ||| |||| |||||||||||| ||||||||| |||||| |||||| | | ||| |
Sbjct 805 GTTGTTGAGATGGGTTTTGATCCATCCACCTCAAAGTTTGTGGAAGCTTTGT-GCGTTGT 863
Query 765 TTACACATTGAGCGACAAAGGA-ATTGAA-AGTAAATTCAATGCCTGTAAAAGGTTAGGC 822
| | | ||||||||||||| | || ||| | |||| ||||||| | |||||||||||||
Sbjct 864 TCAAAGATTGAGCGACAAAA-ACATAGAAGA-TAAAGTCAATGCGTATAAAAGGTTAGGC 921
Query 823 TTGGCTGTGG 832
|| | |||||
Sbjct 922 TTTGATGTGG 931
Score = 281 bits (152), Expect = 2e-74
Identities = 256/306 (84%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 2089 GAGCAGAAGATTTTGAACACCATTGAAACATTTCTAGACCTAGGATTTAGCAGAGATGAG 2148
||| ||||||| ||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct 982 GAGAAGAAGATATTGAACACCATTGAAACATTTCTAGGCCTAGGGTTCAGCAGAGATGAG 1041
Query 2149 TTT-GCAATGATAGCCAAGCGCTTTCCTCCATGCC-TTATTTTATCTGCAGCGACGGTGA 2206
||| || || || ||||||||||||| | | | || ||||| || | || ||| |
Sbjct 1042 TTTAGCG-TGTTAATTAAGCGCTTTCCTC-AGGGCATTGGATTATCCGCGGAGATGGTTA 1099
Query 2207 AGAAGAAGACTGAGTTTGTGGTAAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAA 2266
| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct 1100 AAAAGAAGACTGAGTTTTTGGTAAAGAAGATGAATTGGCCACTAAAGGCTCTTGTTTCAA 1159
Query 2267 CCCCTGCGGTACTTGGATACAGCCTCGAGAAGAGGACTGTACCCA-GGTGTAATGTAATT 2325
||||||||| |||||||||||||| |||||||||||||| |||| || |||| ||| ||
Sbjct 1160 ACCCTGCGGTGCTTGGATACAGCCTAGAGAAGAGGACTGT-CCCAAGGGGTAACGTAGTT 1218
Query 2326 AAAGCTCTCATGTCAAAAGGATTGCCCGGAAGTGAACTGCCTCCAATGTCGTC-TGTTTT 2384
|||||||||| || || |||||| |||||||||||| ||| | || ||| | ||| ||
Sbjct 1219 CAAGCTCTCATCTCCAAGGGATTGATCGGAAGTGAACTCCCTTCGATATCG-CGTGTCTT 1277
Query 2385 GGTATG 2390
|||||
Sbjct 1278 CGTATG 1283
Score = 178 bits (96), Expect = 2e-43
Identities = 230/290 (79%), Gaps = 27/290 (9%)
Strand=Plus/Plus
Query 841 GAGAAGAAGATAGAGAACTCCATTGAAACATTTCTAGGTCTAGGATTCACCAGAGATGAG 900
|||||||||||| |||| ||||||||||||||||||| ||||| |||| ||||||||||
Sbjct 982 GAGAAGAAGATATTGAACACCATTGAAACATTTCTAGGCCTAGGGTTCAGCAGAGATGAG 1041
Query 901 TTTTTG-ATGATGGTCAAGCGGTTTCCTCAGTGCATTGGA-TAT---------TCG---- 945
||| | || | | ||||| ||||||||| |||||||| ||| | |
Sbjct 1042 -TTTAGCGTGTTAATTAAGCGCTTTCCTCAGGGCATTGGATTATCCGCGGAGATGGTTAA 1100
Query 946 ACAG-AG--T-A---TTTGGTGAAGGAGATGAATTGGCCACTTAAGGCTGTGGCTTCAAT 998
| || || | | |||||| ||| |||||||||||||||| |||||| | | |||||
Sbjct 1101 AAAGAAGACTGAGTTTTTGGTAAAGAAGATGAATTGGCCACTAAAGGCTCTTGTTTCAAA 1160
Query 999 CCCT-CAGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTAAT-C 1056
|||| | ||| |||||||||||||||||||||||||||||||||||| |||| ||| | |
Sbjct 1161 CCCTGC-GGTGCTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGGGTAACGTAGTTC 1219
Query 1057 AAAGCTCTCATGTCAAAAGGATTGTTCGGAAGTGAACTCCCTCCAATATC 1106
|| |||||||| || || |||||| ||||||||||||||||| | |||||
Sbjct 1220 AA-GCTCTCATCTCCAAGGGATTGATCGGAAGTGAACTCCCTTCGATATC 1268
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 704 bits (381), Expect = 0.0
Identities = 702/851 (82%), Gaps = 46/851 (5%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTG 60
|||||| ||||||| ||||||||||||| |||||| ||||| ||||||||| || ||||
Sbjct 228 ATGTATGCTCTGATACTCCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGTGTAACTTT 287
Query 61 AGGGTTTCGGTGAATCTTTTCCAAAATGG-ATCTGCTTTTTCCAATTCCTTCTCCTCCGC 119
|| |||| ||| ||||| || ||| || ||||||| |||||||| |
Sbjct 288 AGTCTTTCAGTG---------CAAAA-GGCATCACCTACATCCAATTTCTTCTCCT---C 334
Query 120 TGCTAGTGCTTC-TGATGTGAGTCCTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTCT 178
|||| |||| | || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 TGCTTCTGCTGCGTG-TTTGAGTCCTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTCT 393
Query 179 CTTACCTCGTTGATTCATTGGGTTTA-CCT-AACAAGCTCGCAGAATCTATTTCAAGGAA 236
||||||| |||||||||||||| ||| || || || ||||| ||||| |||||| ||||
Sbjct 394 CTTACCTTGTTGATTCATTGGGCTTAACCACAA-AA-CTCGCTGAATCCATTTCACGGAA 451
Query 237 AGTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGTCATGG 296
|| ||||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 452 GGTTAGCTTCGAGGACAAGAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCATGG 511
Query 297 GTTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCCACTA-TTGCTTATAGCTG 355
|||||||| |||||||||||| | |||||||| |||||| |||| | ||||||||||| |
Sbjct 512 GTTCACAGGTTCTCAGATCTCCACCATCATTAGGGATTACCCAC-AGTTGCTTATAGCAG 570
Query 356 ATGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCT 415
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 571 ATGCTGAGAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCT 630
Query 416 CTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGA-AAA 474
|||| ||||||||||||||||| |||||||| |||| ||||||||||||| || | |||
Sbjct 631 CTGAAATCACTGAGATTGTTTCTTCAGTTCCGGAAATATTGGGAAAGAAAG-GGCACAAA 689
Query 475 TCTATCAGCGCATACTATGATTTCGTCAAAGTCA-TTATAGAA-GCAGATAAGAGTTCCA 532
||||||||| ||||||||||||| |||||| || || | | | ||| | ||||||||
Sbjct 690 ACTATCAGCGTATACTATGATTTCATCAAAGACACTT-T-GCTTG-AGA-A-GAGTTCCA 744
Query 533 ATTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAA 592
| | || | ||||||||||||||||| |||||| | | |||||| || || ||||
Sbjct 745 AGAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAAT---CTGGAGAACAAGATCAGAA 801
Query 593 ATGTTTTGGTTTTGAGAGAATTGGGGGTGCCTCAGAGGGTT-TTATTCTCATTGCTTC-T 650
|||| | |||||| ||||||||||| ||||||| | | || |||||||| ||||| | |
Sbjct 802 ATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAG-TTGTTATTCTCCTTGCT-CAT 859
Query 651 ATCCGATGGC-AGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGGTAG 709
|||||| || | || ||| |||||||||||||||||| ||||| | |||||||| || |
Sbjct 860 CTCCGATAGCCA-ACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGTTG 918
Query 710 TTAAGATTGGTTTTGATCCAACCACCTCAACGTTTGTCGAAGCTCT-CAAGGTTCTTTAC 768
|| |||| ||||||||||| |||||||||| ||||||||||||||| |||| || |||||
Sbjct 919 TTGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGCTCTACAAG-TTATTTAC 977
Query 769 ACATTGAGCGACAAAGGAATTGAAAGTAAAT-TCAATGC-CTGTAAAAGGTTAGGCTTGG 826
| | ||| ||| ||| ||| ||| | ||| || || | || |||||| |||||||| |
Sbjct 978 AAAATGAACGAGAAAACAATCGAA-GAAAAAGTCCAT-CTCTATAAAAGCTTAGGCTTTG 1035
Query 827 CTGTGGGCGAT 837
|||||| |||
Sbjct 1036 ATGTGGGAGAT 1046
Score = 665 bits (360), Expect = 0.0
Identities = 701/859 (82%), Gaps = 49/859 (6%)
Strand=Plus/Plus
Query 1124 CCA-GGGAGAA-GTTGGTCCAGTTGCAGAAATGGCGTCA-TTTGAGAGTTTCAGTGAACC 1180
||| || |||| |||||| ||||||||||||||| || | ||| || ||||||||
Sbjct 245 CCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGTGTAACTTT-AGTCTTTCAGTG---- 299
Query 1181 TTCTCGAAAAGCCATCTCCT-TTTCCCAATTCCTTCTCCTATGCTACTGCTACAGATG-- 1237
| ||||| |||| ||| | |||||| |||||||| |||| ||||| | | ||
Sbjct 300 ----C-AAAAGGCATCACCTACAT-CCAATTTCTTCTCCTCTGCTTCTGCTGC-G-TGTT 351
Query 1238 CGAG-CCTTAGAGCTGGTCGAAAAAGG-TTGAATTTTTCTGTCTCTTACCTCGTTGCTTC 1295
||| || ||||| |||||| |||||| || ||| | ||||||||||| |||| |||
Sbjct 352 TGAGTCC-TAGAGTTGGTCG-AAAAGGAAACAACTTTACAGTCTCTTACCTTGTTGATTC 409
Query 1296 ATTGGGTTTAACTA-AAGAAGTCGCAGAATCGATCTCAAGGAAAGTCT-GTTTGGTTGAC 1353
|||||| ||||| | || || |||| ||||| || ||| |||| || | | || | |||
Sbjct 410 ATTGGGCTTAACCACAA-AACTCGCTGAATCCATTTCACGGAAGGT-TAGCTTCGAGGAC 467
Query 1354 AAGGGCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAG 1413
||| |||||||||||||||||||| |||||||| |||| ||| |||||| | |||||||
Sbjct 468 AAGAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCATGGGTTCACAGGTTCTCAG 527
Query 1414 ATCTCCACCATCGTTACGGATTATCCACAATTGCTAATAGCTGATGCTGAGAAATCACTT 1473
|||||||||||| ||| |||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct 528 ATCTCCACCATCATTAGGGATTACCCACAGTTGCTTATAGCAGATGCTGAGAAATCACTT 587
Query 1474 GCTCCCAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCGCTGTGATT 1533
| |||||||||||||||| ||| ||| |||||||||||||||||||| || ||| ||||
Sbjct 588 GGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAAATCACTGAGATT 647
Query 1534 GTATCTACAGTTCCTAAAATTTTGGGAAAGAAAGGGGACAAAACTATCAGCATATACTAT 1593
|| ||| ||||||| |||| ||||||||||||||| |||||||||||||| ||||||||
Sbjct 648 GTTTCTTCAGTTCCGGAAATATTGGGAAAGAAAGGGCACAAAACTATCAGCGTATACTAT 707
Query 1594 GATATCGTCAAAGAGA-TTATAGAAGC-GGATAAGAGTTCCAAGTTCGAAAAATTATGTC 1651
||| || ||||||| | || | || || |||||||||||| |||||| |||||||
Sbjct 708 GATTTCATCAAAGACACTT-T----GCTTGAGAAGAGTTCCAAGAACGAAAAGTTATGTC 762
Query 1652 ATTCTTTTCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGTTTCGGTTCTGAGAG 1711
||||||| ||||| || |||||||||||||||||||||||||||| |||||| | ||||
Sbjct 763 ATTCTTTGCCACA-GG--GTAATCTGGAGAACAAGATCAGAAATGTATCGGTTTTAAGAG 819
Query 1712 AGTTAGGTGTGCCTCAGAGGGTT-TTATTCTCCTTGCTCATATCTGATCA-CCAACCTGT 1769
| || || ||||||| | | || ||||||||||||||||| || ||| | |||||||||
Sbjct 820 AATTGGGAATGCCTCACAAG-TTGTTATTCTCCTTGCTCATCTCCGAT-AGCCAACCTGT 877
Query 1770 CTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCC 1829
|||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 878 ATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCC 937
Query 1830 GACCACCTCAAAGTTTGTCGAAGCTCTA-AACGTTGTTTATAGACTGAGCGACGAAA-CA 1887
||||||||||||||||||||||||||| || ||| |||| | | ||| ||| |||| ||
Sbjct 938 TACCACCTCAAAGTTTGTCGAAGCTCTACAA-GTTATTTACAAAATGAACGA-GAAAACA 995
Query 1888 ATAGAAGAAAAAGTT-AGTGTCTGTAAAGGGTTAGGTTTTTCTGTTGGAGATGTATGGGA 1946
|| ||||||||||| | | ||| |||| | ||||| ||| ||| ||||||||||||
Sbjct 996 ATCGAAGAAAAAGTCCA-TCTCTATAAAAGCTTAGGCTTTGATGTGGGAGATGTATGGTC 1054
Query 1947 AA-TGTTCAAGAAGTGGCC 1964
|| | || || ||||||||
Sbjct 1055 AAGTTTTAAA-AAGTGGCC 1072
Score = 287 bits (155), Expect = 4e-76
Identities = 249/295 (84%), Gaps = 4/295 (1%)
Strand=Plus/Plus
Query 2089 GAGCAGAAGATTTTGAACACCATTGAAACATTTCTAGACCTAGGATTTAGCAGAGATGAG 2148
||| ||||||| ||| || |||||||||||||||| | ||||||||| ||||||||||||
Sbjct 1092 GAGAAGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCAGCAGAGATGAG 1151
Query 2149 TTTG-CAATGATAGCCAAGCGCTTTCCTCCATGCCTTATTTTATCTGCAGCGACGGTGAA 2207
|||| ||| ||| | ||||| ||||||||| ||| || |||||| ||| |||||| ||
Sbjct 1152 TTTGCCAA-GATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCTACAGAGACGGTCAA 1210
Query 2208 GAAGAAGACTGAGTTTGTGGTAAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAC 2267
||||| ||||||||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1211 AAAGAAAACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTTGTTTCAAA 1270
Query 2268 CCCTGCGGTACTTGGATACAGCCTCGAGAAGAGGACTGTACCCAGGTGTAATGTAATTAA 2327
|||||||||| ||||||| ||||| |||||||||| ||| || ||| |||| ||||| ||
Sbjct 1271 CCCTGCGGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGGGGTAACGTAATCAA 1330
Query 2328 AGCTCTCATGTCAAAAGGATTGCCCG-GAAGTGAACTGCCTCCAATGTCGTCTGT 2381
|||||||||||| ||||||||| | ||| |||||| ||| | || |||| |||
Sbjct 1331 AGCTCTCATGTCCAAAGGATTGAT-GAGAAATGAACTCCCTTCGATATCGTGTGT 1384
> AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911205-22912935 FORWARD
LENGTH=1731
Length=1731
Score = 484 bits (262), Expect = 1e-135
Identities = 596/747 (80%), Gaps = 63/747 (8%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTTCAGAAATGGCGTCACTTG 60
|||||||||||||||||||||||||||| ||||||||| | ||||||| | ||||
Sbjct 249 ATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT---G---CTTG 302
Query 61 AGGGTTTCG-GTGAATCTTTTCCAAAATGGATCTGCTTTT-TCCAATTCCTTCTCCTCCG 118
| |||| | ||| || | ||||||| || || |||| ||||||||||||| ||
Sbjct 303 A--GTTT-GAGTGTTTC-AGTGCAAAATGCATTTG-TTTTGTCCAATTCCTTCT-CT--T 354
Query 119 CTGCTAGTGCTTCTGATGTGAGTC-CTAGAGTTGGTCGAAAAGGAAACAACTTTACAGTC 177
||||||| ||| |||||||||| | ||||| |||||||||||| || ||||||||||||
Sbjct 355 CTGCTAGAGCTGCTGATGTGAG-CATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTC 413
Query 178 TCTTACCTCGTTGATTCATTGGGTTTACCTAACAAGCTCGCAGAATCTATTTCAAGGAAA 237
||||||||||||||||||||||||||| |||| |||||||| ||||| || |||||||||
Sbjct 414 TCTTACCTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAA 473
Query 238 GTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAA-TCT-TTTGAGAAGTCATG 295
|| ||||| |||||||||| |||||||| ||||||||| || ||| ||| |||||| | |
Sbjct 474 GTTAGCTTTGAGGACAAGGTCAATCCTGATTCTGTTCT-AAGTCTGTTT-AGAAGTTACG 531
Query 296 GGTTCACAGATTCTCAGATCTCAAGCATCATTACGGATTATCCACTATTGCTTATAGCTG 355
|||||||||||||||||||||| | |||||||||||||||||| |||||||| |||| |
Sbjct 532 GGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAG 591
Query 356 ATGCTGACAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCT 415
||||| | ||| ||||||||| |||||||||| || ||||||| ||||||||||||||||
Sbjct 592 ATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGCTTCAAGCT 651
Query 416 CTGAGCTCACTGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGAAAAT 475
||||| ||||||||||||||||| |||| |||| |||||| ||||||||| |
Sbjct 652 CTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGAAA---------T 702
Query 476 CTATCAGC-GCATACTATGATT-TCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCAA 533
|||| | | | |||||||||| | ||||||| |||||||| ||| |||| |||||| |
Sbjct 703 CTATTA-CTGTATACTATGATGCT-GTCAAAGACATTATAGTAGCCGATACGAGTTCGAG 760
Query 534 TTTGGGAAGGATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAAA 593
|| | | | | | | | ||| ||||| | || || ||||||||| ||||
Sbjct 761 TT----ATG-A-A---C-T-C----CCACAGGGTTCTCAG--GG-GAATAAAATCCGAAA 802
Query 594 TGTTTTGGTTTTGAGAGAATTGGGGGTGCCT-CAGAGGGTT-TTATT-CTCATTGCTTC- 649
||| | || |||||||||||| || ||||| | || || ||||| | | ||||| |
Sbjct 803 TGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GG-TTGTTATTACCC-TTGCT-CG 858
Query 650 TATCCGA-TGGCAGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGGTA 708
| ||| | | |||| | ||| |||||||||||||| ||| | | ||| || ||||||||
Sbjct 859 TCTCCAAATCGCAGCC-TGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTT 917
Query 709 GTTAAGATTGGTTTTGATCCAACCACC 735
||| |||| || |||||||| ||||||
Sbjct 918 GTTGAGATGGGGTTTGATCCCACCACC 944
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 416 bits (225), Expect = 5e-115
Identities = 448/549 (82%), Gaps = 42/549 (8%)
Strand=Plus/Plus
Query 250 GACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACAGATTCT 309
|||||||| ||| ||| ||| |||||| ||||| | |||||| |||||||||| ||||||
Sbjct 337 GACAAGGGAAATTCTGATTCCGTTCTGGATCTTCTCAGAAGTTATGGGTTCACTGATTCT 396
Query 310 CAGATCTCAAGCATCATTACGGA-TTATCCACTATTGCTTATAG-C--TGATGCTGACAA 365
|||||||| |||||||| | ||| | || || | ||||||||| | |||||| |||
Sbjct 397 CAGATCTCCAGCATCATCA-GGAGTGATTCAAGAGTGCTTATAGACAATGATGC-GAC-- 452
Query 366 ATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCAC 425
||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 ATCCCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCAC 512
Query 426 TGAGATTGTTTCTGCAGTTCCGAAAATCTTGGGAAAGAAAGAGGGAAAATCTATCAGC-G 484
|||| ||||||| ||||||| ||||||||||| |||| |||||| |||||| ||||| |
Sbjct 513 TGAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAGGGCAAATCTCTCAGCAG 572
Query 485 CATACTATGATTTCGTCAAAGTCATTATAGAAGCAGATAAGAGTTCCAATT-TGGGAAGG 543
||| ||||||||| ||||||||||||||||||| |||||||||||||| | || |||
Sbjct 573 -ATATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGTTCCAAGTATGAAAAG- 630
Query 544 ATATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATTAGAAATGTTTTGGTT 603
|||| |||||||||| || |||||| | || ||| | | ||||| | ||||||
Sbjct 631 ATATCTCATTCTTTGGCACAGGGTA--A--CA--AGA-TCA-----GAAATATCTTGGTT 678
Query 604 TTGAGAGAATTGGGGGTGCCTCAGA-G-GGTTTTATT-CTCATTGCTTC-TATCCGA-TG 658
||||||||| | || |||||||| | | |||| | | || ||||| | | ||| | |
Sbjct 679 TTGAGAGAACTAGGCGTGCCTCAAAAGCGGTT--ACTGCTT-TTGCT-CATCTCCAAATC 734
Query 659 GCAGACATGTTTGTGGAAAAGAAAAATTTAAAGAATCACTCAAGAAGGTAGTTAAGATTG 718
|||| | |||||||||||||||||| ||| | | ||||||||||||||||||| |||| |
Sbjct 735 GCAGCC-TGTTTGTGGAAAAGAAAAGTTTGATGCATCACTCAAGAAGGTAGTTGAGATGG 793
Query 719 GTTTTGATCCAACCACCTCAACGTTTGTCGAA-GCTCT-CA-AGGTTCTTTAC-ACATTG 774
|||||||||||||||||||||||||||| | | ||| | || | | |||||| | || |
Sbjct 794 GTTTTGATCCAACCACCTCAACGTTTGT-GCACGCTTTGCATATG--CTTTACCAAAT-G 849
Query 775 AGCGACAAA 783
|||||||||
Sbjct 850 AGCGACAAA 858
Score = 412 bits (223), Expect = 6e-114
Identities = 524/662 (79%), Gaps = 50/662 (8%)
Strand=Plus/Plus
Query 1350 TGACAAGGGCAATCCTGATTCTGTTCT-GAGTCTTTTGAGAAGTTATGCGTTCACTGATT 1408
||||||||| ||| ||||||| ||||| || |||| | |||||||||| |||||||||||
Sbjct 336 TGACAAGGGAAATTCTGATTCCGTTCTGGA-TCTTCTCAGAAGTTATGGGTTCACTGATT 394
Query 1409 CTCAGATCTCCACCATCGTTACGGATT-ATCCACA-ATTGCTAATAG-CTGATGCTGAGA 1465
|||||||||||| |||| | | ||| | || || | | |||| |||| | ||| || ||
Sbjct 395 CTCAGATCTCCAGCATCATCA-GGAGTGATTCA-AGAGTGCTTATAGACA-ATGATGCGA 451
Query 1466 AATCACTTGCTCCCAAGCTTCAGTTTCTGCTGTCCAGAGGAGCTTCAAGCTCTGAGCTCG 1525
||| |||| | | |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 452 CATCCCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCA 511
Query 1526 CTGTGATTGTATCTACAGTTCCTAAAATTTTGGGAAAGAAAG-GGGACAAAACTATCAGC 1584
||| | |||| || |||||||||||||| ||||| |||| || ||| |||| || |||||
Sbjct 512 CTGAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAGGG-CAAATCTCTCAGC 570
Query 1585 ATATACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGT-TCGAAAA 1643
| ||| |||||| || |||||| ||||||||||| |||||||||||||||| | |||||
Sbjct 571 AGATATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGTTCCAAGTAT-GAAAA 629
Query 1644 -ATTATGTCATTCTTTTCCACAGGGTAGTAATCTGGAGAACAAGATCAGAAATGT-TTCG 1701
|| || ||||||||| ||||||||| | | | | |||||||||| | || |
Sbjct 630 GAT-ATCTCATTCTTTGGCACAGGGTA--A--C---A-A----GATCAGAAATATCTT-G 675
Query 1702 GTTCTGAGAGAGTTAGGTGTGCCTCAGA-G-GGTTTTATT-CTCCTTGCTCATATCTGA- 1757
||| ||||||| |||| |||||||| | | |||| | | || |||||||| || |
Sbjct 676 GTTTTGAGAGAACTAGGCGTGCCTCAAAAGCGGTT--ACTGCTT-TTGCTCATCTCCAAA 732
Query 1758 TCACCAACCTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGAT 1817
|| | | ||||| |||||||||||||| ||||| | |||||||||||| || ||||||||
Sbjct 733 TCGC-AGCCTGTTTGTGGAAAAGAAAAGTTTGATGCATCACTCAAGAAGGTAGTTGAGAT 791
Query 1818 GGGTTTTGATCCGACCACCTCAAAGTTTGTCGAA-GCTCTAAACGTTG-TTTAT-AGACT 1874
|||||||||||| |||||||||| |||||| | | ||| | | | | |||| | | |
Sbjct 792 GGGTTTTGATCCAACCACCTCAACGTTTGT-GCACGCTTTGCATAT-GCTTTACCAAA-T 848
Query 1875 GAGCGACGAAACAATAGAAGAAAAAGTTAGTGTCTGTA-AAGGGTTAGGTTTTTCTGTTG 1933
||||||| |||| || ||||||||| | | |||| || ||| || |||||| |||||||
Sbjct 849 GAGCGACAAAACGATTGAAGAAAAAATCCGAGTCTATAGAAGTGT-AGGTTTCTCTGTTG 907
Query 1934 GA-GATGTATGGGAAATGTTCAAGAAGTGGCCTTGCT-TTCTCA-ATAACTCGGAGAAGA 1990
| |||||||||| |||||||||||||||||| ||| || | | | | ||||||||||
Sbjct 908 -ATGATGTATGGGCAATGTTCAAGAAGTGGCCACGCTCTT-TGACACAT-TCGGAGAAGA 964
Query 1991 AG 1992
||
Sbjct 965 AG 966
Score = 311 bits (168), Expect = 2e-83
Identities = 266/309 (86%), Gaps = 23/309 (7%)
Strand=Plus/Plus
Query 836 ATTCTGAGAAGAAGATAGAGAACTCCATTGAAACATTTCTAGGTCTAGGATTCACCAGAG 895
|||| ||||||||| ||| ||||| || ||||||||||||||||||||||||| |||||
Sbjct 953 ATTCGGAGAAGAAGGTAGCCAACTCTATAGAAACATTTCTAGGTCTAGGATTCAGCAGAG 1012
Query 896 ATGAGTTTTTGATGATGGTCAAGCGGTTTCCTCAGTGCATTGGATA-T-T-C-GA--C-- 947
||| |||| |||||||| ||||||||||||||| ||| |||||||| | | | || |
Sbjct 1013 ATGTGTTTATGATGATGTTCAAGCGGTTTCCTCCGTGTATTGGATATTCTACAGAGGCGG 1072
Query 948 ------AG-AG--T-A---TTTGGTGAAGGAGATGAATTGGCCACTTAAGGCTGTGGCTT 994
|| || | | |||||| |||||||||||||||||| | |||||||||||||
Sbjct 1073 TGAAGAAGAAGACTGAGTTTTTGGTCAAGGAGATGAATTGGCCAGTAAAGGCTGTGGCTT 1132
Query 995 CAATCCCTCAGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTAA 1054
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1133 CAATCCCTCAGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTA 1192
Query 1055 TCAAAGCTCTCATGTCAAAAGGATTG-TTCGGAAGTGAACTCCCTCCAATATCATCTGTT 1113
|||||| ||||||||||||||||||| || | |||||||||||||||||| || ||||||
Sbjct 1193 TCAAAGTTCTCATGTCAAAAGGATTGCTT-GAAAGTGAACTCCCTCCAATGTCTTCTGTT 1251
Query 1114 TTGACAAGT 1122
|||||||||
Sbjct 1252 TTGACAAGT 1260
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 346 bits (187), Expect = 6e-94
Identities = 283/328 (86%), Gaps = 12/328 (4%)
Strand=Plus/Plus
Query 1 ATGTATTCTCTGATTCTCCATGGAAGAAAG-T-TGGTCCAGTTTCAGAAATGGCGTCACT 58
|||| ||||||||| ||||||||||| ||| | | || |||| || ||||||||| |||
Sbjct 121 ATGTGTTCTCTGATACTCCATGGAAG-AAGATCT-ATCGAGTTACATAAATGGCGTAACT 178
Query 59 TGAGGGTTTCGGTGAATCTTTTCCAAAATGGA---TCTGCTTTTTCCAATTCCTTCTCCT 115
| || ||||| ||||| ||||| ||||||| | ||||||||||||||||||||||||
Sbjct 179 TTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTCCA 238
Query 116 CCGCTGCTAGTGCT--T-CTGATGTGAGTCC-TAGAGTTGGTCGAAAAGGAAACAACTTT 171
| | |||||||||| | |||||||||| || || || | ||| |||||| || ||||||
Sbjct 239 CTGTTGCTAGTGCTGCTGCTGATGTGAG-CCTTATAGATAGTCAAAAAGGTAAGAACTTT 297
Query 172 ACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCTAACAAGCTCGCAGAATCTATTTCA 231
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 298 ACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCTAAAAAGCTCGCTGAATCGATTTCA 357
Query 232 AGGAAAGTCAGCTTCGAGGACAAGGGCAATCCTGTTTCTGTTCTGAATCTTTTGAGAAGT 291
| |||| | || ||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct 358 AAGAAATTTAGATTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGT 417
Query 292 CATGGGTTCACAGATTCTCAGATCTCAA 319
||||||||||||| ||||||||||||||
Sbjct 418 CATGGGTTCACAGTTTCTCAGATCTCAA 445
Score = 215 bits (116), Expect = 2e-54
Identities = 237/292 (81%), Gaps = 21/292 (7%)
Strand=Plus/Plus
Query 1142 AGTTGCAGAAATGGCGTCA-TTTGAGAGTTTCAGTGAACCTTCTCG-AAAA-GCCA-TCT 1197
|||| || ||||||||| | ||| || ||||||||||| ||| | | |||| | | |||
Sbjct 158 AGTTACATAAATGGCGTAACTTT-AGTGTTTCAGTGAAGCTT-TTGCAAAATG-TATTCT 214
Query 1198 C--CTTTTCCCAATTCCTTCT-C-CT-ATGCTA---CTGCTACAGATGCGAGCCTTAGAG 1249
| ||||| |||||||||||| | || ||||| ||||| | |||| |||||||| ||
Sbjct 215 CTGCTTTTTCCAATTCCTTCTCCACTGTTGCTAGTGCTGCTGCTGATGTGAGCCTTATAG 274
Query 1250 CTGGTCGAAAAAGGT-TGAATTTTTCTGTCTCTTACCTCGTTGCTTCATTGGGTTTAACT 1308
| ||| |||||||| ||| ||| | |||||||||||||||| ||||||||||||| ||
Sbjct 275 ATAGTC-AAAAAGGTAAGAACTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCT 333
Query 1309 AAAGAAG-TCGCAGAATCGATCTCAAGGAAAGTCT-GTTTGGTTGACAAGGGCAATCCTG 1366
||| ||| |||| |||||||| |||| |||| | | | || | ||||||| ||||||||
Sbjct 334 AAA-AAGCTCGCTGAATCGATTTCAAAGAAA-TTTAGATTCGAGGACAAGGCCAATCCTG 391
Query 1367 ATTCTGTTCTGAGTCTTTTGAGAAGTTATGCGTTCACTGATTCTCAGATCTC 1418
|||||||||||||||||||||||||| ||| |||||| | ||||||||||||
Sbjct 392 ATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACAGTTTCTCAGATCTC 443
> AT1G62055.1 | Symbols: | pseudogene, hypothetical protein |
chr1:22940331-22940864 REVERSE LENGTH=534
Length=534
Score = 313 bits (169), Expect = 6e-84
Identities = 276/326 (85%), Gaps = 14/326 (4%)
Strand=Plus/Plus
Query 139 AGTCCTAGAGTTGGTCGAAAAGGAAACA-ACTTT-AC-AGTCTCTTACCTCGTTGATTCA 195
||| ||| || |||||||||||| || | ||| || | ||||||||||| ||||||||
Sbjct 175 AGTGCTAAAGATGGTCGAAAAGG--TCAGATTTTCACTA-TCTCTTACCTCATTGATTCA 231
Query 196 TTGGG-TTTACCTAACAAGCTCGCAGAATCTATTTCAAGGAAAGTCAGCTTCGAGGACAA 254
||||| || ||| || || ||||| ||||| || || |||||||| ||| |||| || |
Sbjct 232 TTGGGATTAACCGAA-AAACTCGCTGAATCCATCTCGAGGAAAGTAAGCGTCGATGA-GA 289
Query 255 GG-GCAATCCTGTTTCTGTTCTGAATCTT-TTGAGAAGTCATGGGTTCACAGATTCTCAG 312
|| | ||||||| |||||||||||||||| || |||||| |||| |||||||||||||||
Sbjct 290 GGAGAAATCCTGATTCTGTTCTGAATCTTCTT-AGAAGTTATGGTTTCACAGATTCTCAG 348
Query 313 ATCTCAAGCATCATTACGGATTATCCACTATTGCTTATAGCT-GATGCTGACAAATCACT 371
|||||||| |||||||| ||||||| | |||||||||| | |||||| | ||||||||
Sbjct 349 ATCTCAAGTATCATTACAAATTATCCTCGGTTGCTTATAG-TAGATGCTAAGAAATCACT 407
Query 372 TGGTCCCAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTGAGAT 431
|| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 408 TGCTCCCAAGCTTCAGGTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGAC 467
Query 432 TGTTTCTGCAGTTCCGAAAATCTTGG 457
||||||| | ||||| ||||||||||
Sbjct 468 TGTTTCTACCGTTCCTAAAATCTTGG 493
> AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=1200
Length=1200
Score = 182 bits (98), Expect = 2e-44
Identities = 231/295 (78%), Gaps = 10/295 (3%)
Strand=Plus/Plus
Query 1803 GAAAGTTGTTGAGATGGGTTTTGATCCGACCACCTCAAAG-TTTGTCGAAGCT-CTAAAC 1860
||| ||| ||||||||||||||||||| | || |||| ||| |||| ||| | |
Sbjct 495 GAAGGTTATTGAGATGGGTTTTGATCCTTTCGCCCCAAAAATTT-TCGATGCTACGGT-C 552
Query 1861 GTTGTTTATAGACTGAGCGACGAAACAATAGAAGAAAAAGTTAGTGTCTGTAAAGGGTTA 1920
||||||| | | | ||| |||||||| ||||||||| ||| | | ||| |||| ||||
Sbjct 553 GTTGTTTGCACATTAAGCAACGAAACATTAGAAGAAAGAGTCAATATCTATAAAACGTTA 612
Query 1921 GGTTTTTCTGTTGGAGATGTATGGGAAATGTTCAAGAAGTGGCCTTGCTTT-CTCAATAA 1979
|| ||| ||| |||||||||||||||||||||||||||| ||| |||| || ||||
Sbjct 613 GGCTTTGATGTCAGAGATGTATGGGAAATGTTCAAGAAGTGTCCTA-CTTTTCTGAATAT 671
Query 1980 CTCGGAGAAGAAGATAAGTCAAACATTT-GAAACCCTGAAGAAGTGTGGACTACCCGAAG 2038
||||||||||||||||| ||| | ||| ||||| |||||||||||||||| |||||
Sbjct 672 CTCGGAGAAGAAGATAACTCAGAG-TTTCGAAACATTGAAGAAGTGTGGACTTGTCGAAG 730
Query 2039 ACGAGGTCCTCTC-ACTGTTGAAGAAGTTTCCACAATGCATTAACGCTTCAGAGC 2092
| || ||| |||| | |||| |||||| ||||||||| ||| | ||||||||
Sbjct 731 AAGAAGTCATCTCTA-TGTTCCAGAAGTCTCCACAATGTATTGATTTTTCAGAGC 784
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121133915085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5