BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315221 Length=1761 Score E Sequences producing significant alignments: (Bits) Value AT1G61560.1 | Symbols: MLO6, ATMLO6 | Seven transmembrane MLO f... 2645 0.0 > AT1G61560.1 | Symbols: MLO6, ATMLO6 | Seven transmembrane MLO family protein | chr1:22708697-22712044 REVERSE LENGTH=1942 Length=1942 Score = 2645 bits (1432), Expect = 0.0 Identities = 1658/1766 (94%), Gaps = 19/1766 (1%) Strand=Plus/Plus Query 1 ATGGCGGATCAAGTTAAAGAAAAGACATTAGAGGAAACTTCTACATGGGCCGTTGCGGTG 60 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 13 ATGGCGGATCAAGTTAAAGAAAAGACATTGGAGGAAACTTCTACATGGGCCGTCGCGGTG 72 Query 61 GTTTGCTTCGTCTTGCTTTTGATTTCGATTGTTATTGAGAAACTTATTCATAAACTTGGA 120 |||||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| Sbjct 73 GTTTGCTTCGTCTTGCTTCTGATTTCGATCGTTATTGAAAAACTTATTCATAAAATTGGA 132 Query 121 TCCTGGTTT-AAGAGTAAGAACAAAAAAGCTCTATATGAAGCACTTGAAAAAGTGAAAGC 179 ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 133 TCCTGGTTTAAAAAG-AAGAACAAAAAAGCTCTATATGAAGCACTTGAAAAAGTGAAAGC 191 Query 180 AGAGCTTATGCTGATGGGATTCATATCACTACTTCTAACAATTGGACAAGGATATATCTC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 AGAGCTTATGCTGATGGGATTCATATCACTACTTCTAACAATTGGACAAGGATATATCTC 251 Query 240 AAATATTTGCATACCTAAGAACATCGCAGCATCGATGCACCCTTGTAGTGCATCCGAAGA 299 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 AAATATTTGCATCCCTAAGAACATCGCAGCATCGATGCACCCTTGTAGTGCATCCGAAGA 311 Query 300 GGCGAGAAAGTACGGTAAGAAAGATGCTGC-AAAGAAAGACGGAGAAGATGGAGAAAATT 358 || |||||||| ||||||||||||| | | |||| |||| | |||||| | || || Sbjct 312 AGCAAGAAAGTATGGTAAGAAAGATG-TCCCAAAGGAAGATGAAGAAGA---A-AAC-TT 365 Query 359 CGCGTCGAAAGCTTCTACAGTTAGTTGATTCTCTTATTCCTCGAAGGAGTTTGGCTACCA 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 366 -GCGTCGAAAGCTTCTACAGTTAGTTGATTCTCTTATTCCTCGAAGGAGTTTGGCTACTA 424 Query 419 AAGGTTATGACAAGTGTGCAGAGAAGGGAAACGTAGCTTTTGTATCGGCTTATGGTATGC 478 |||||||||| |||||||||||||||||||| || |||||||||||||||||||| |||| Sbjct 425 AAGGTTATGATAAGTGTGCAGAGAAGGGAAAAGTCGCTTTTGTATCGGCTTATGGCATGC 484 Query 479 ATCAGCTGCATATATTCATATTTGTTCTTGCGGTTTGTCATGTGATCTACTGCATTGTCA 538 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 485 ATCAGCTGCATATATTCATCTTTGTTCTTGCGGTTTGTCATGTGATCTACTGCATTGTTA 544 Query 539 CTTATGCTTTAGGCAAGACCAAGATGAGAAGGTGGAAGA-GATGGGAAGAGGAGACGAAG 597 |||||||||| || |||||||| |||||||||||||||| | |||||||||||||| ||| Sbjct 545 CTTATGCTTTGGGAAAGACCAAAATGAGAAGGTGGAAGAAG-TGGGAAGAGGAGACTAAG 603 Query 598 ACAATCGAATATCAGTATTCACACGATCCCGAGAGGTTTAGATTTGCGAGGGATACATCT 657 || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 604 ACTATCGAATATCAGTATTCACACGATCCCGAGAGGTTTAGGTTTGCGCGGGATACATCT 663 Query 658 TTCGGGCGTAGACATCTAAATTTCTGGAGCAAATCGACTATTACGCTGTGGATTGTATGT 717 ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| Sbjct 664 TTCGGGCGTAGACATCTGAGTTTCTGGAGCAAATCAACTATTACGCTGTGGATTGTATGT 723 Query 718 TTCTTCAGACAGTTCTTTAGATCTGTAACCAAAGTTGATTACTTAACACTGAGACATGGT 777 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 724 TTCTTCAGGCAGTTCTTTAGATCTGTAACCAAAGTTGATTACTTAACACTGAGACATGGT 783 Query 778 TTCATCATGGCCCATTTGGCTCCCGGGAGCGACGCAAGATTCGATTTCCGAAAGTATATT 837 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 784 TTCATCATGGCCCATTTGGCTCCTGGGAGCGACGCAAGGTTCGATTTCCGAAAGTATATT 843 Query 838 CAGAGATCATTAGAGGAAGACTTCAAAACCATTGTCGAGATCAATCCTGTGATCTGGTTC 897 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 844 CAGAGATCACTAGAGGAAGACTTCAAAACCATTGTCGAGATCAACCCTGTGATCTGGTTC 903 Query 898 ATCGCCGTGTTATTCCTACTGACAAACACACACGGATTGCATTCTTACCTCTGGTTACCG 957 || || ||| ||||||| |||||||||||| |||||||| |||||||||||||| ||||| Sbjct 904 ATAGCTGTGCTATTCCTCCTGACAAACACAAACGGATTGAATTCTTACCTCTGGCTACCG 963 Query 958 TTCATTCCATTCGTCGTGATTCTTATTGTTGGGACAAAACTTCAAGTGATAATAACAAAA 1017 |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 964 TTCATTCCCTTCATCGTGATTCTTATTGTTGGAACAAAACTTCAAGTGATAATAACAAAA 1023 Query 1018 CTGGGACT-ACGAATCCAAGAGAAAGGTGACGTAGTGAAAGGCACACCGCTAGTTCAGCC 1076 || ||||| | |||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 1024 CTAGGACTTA-GAATCCAAGAGAAAGGCGACGTAGTGAAAGGCACACCGCTAGTTCAACC 1082 Query 1077 CGGTGATCATTTCTTCTGGTTCGGTCGCCCACGTTTCATTCTCTTCCTCATTCACTTAGT 1136 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1083 CGGTGATCATTTCTTCTGGTTCGGTCGTCCACGTTTCATTCTCTTCCTCATTCACTTAGT 1142 Query 1137 CCTCTTCACGAACGCGTTTCAACTCGCTTTCTTTGCCTGGAGTACGTATGAATTCGGTCT 1196 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1143 CCTCTTCACGAACGCGTTTCAACTAGCTTTCTTTGTCTGGAGTACGTATGAATTCGGTCT 1202 Query 1197 AAAGAACTGTTTCCATGAAAGCAGAGTAGATGTGATCATCAGAATCTCAATCGGACTTAT 1256 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct 1203 AAAGAACTGTTTCCATGAAAGCAGAGTTGACGTGATCATCAGAATCTCAATCGGACTTTT 1262 Query 1257 AGTCCAGATTCTTTGCAGCTACGTTACTCTTCCTCTATATGCTCTCGTTACTCAAATGGG 1316 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1263 AGTTCAGATTCTTTGCAGCTACGTTACTCTTCCTCTATATGCTCTTGTTACTCAAATGGG 1322 Query 1317 TTCAAAGATGAAGCCAACAGTATTCAACGAGAGAGTAGCAACGGCATTAAAGAGTTGGCA 1376 |||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||| Sbjct 1323 TTCAAAGATGAAACCAACAGTGTTCAACGAGAGAGTAGCAACAGCGTTAAAGAGTTGGCA 1382 Query 1377 TCACACAGCAAAGAAACAGATCAAACATGGAAGAACTTCAGAATCAACAACACCTTTCTC 1436 ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 1383 TCACACAGCTAAGAAAAATATCAAACATGGAAGAACTTCAGAATCAACAACACCTTTCTC 1442 Query 1437 TAGCCGACCAACAACACCAACACATGGTTCTTCTCCGATTCATCTTCTCCGAAATGCCCC 1496 ||| |||||||||||||||| ||||||||||||||||||||||| || || ||||| || Sbjct 1443 TAGTAGACCAACAACACCAACTCATGGTTCTTCTCCGATTCATCTCCTTCGTAATGCTCC 1502 Query 1497 CCACAAACGAAGCAGAAGCGTCGACGAAAGCTTCGCGAATTCGATGTCTCCTAGAAACTC 1556 |||||||||||||||||||| ||||||||||| ||||||||| | ||||| |||||||| Sbjct 1503 TCACAAACGAAGCAGAAGCGTTGACGAAAGCTTTGCGAATTCGTTTTCTCCGAGAAACTC 1562 Query 1557 TGATTTCGATTCATGGGATCCTGAATCTCAACACGAAG-TAGCTGAGACTTCGAATTCAA 1615 |||||||||||| ||||||||||| |||||||| ||| | ||||||||||||||||| | Sbjct 1563 TGATTTCGATTCGTGGGATCCTGAGTCTCAACATGAAACT-GCTGAGACTTCGAATTCGA 1621 Query 1616 ATCATCGTTCTAGGGTTGGAGAAGAAGAGTCGGAGAAAAAGTTTGTTTCTTCATCATCTG 1675 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | Sbjct 1622 ATCATCGTTCTAGGTTTGGAGAAGAAGAATCGGAGAAAAAGTTTGTTTCTTCATCA---G 1678 Query 1676 TGGAACTTCCTCCAGGACCTGGACAAATACGAACACAGCATGAGATTAGTACTATTAGCT 1735 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1679 TGGAACTTCCTCCTGGACCTGGACAAATACGAACACAGCATGAGATTAGTACTATAAGCT 1738 Query 1736 TAAGGGATTTTTCGTTTAAACGATGA 1761 ||||||||||||||||||| |||||| Sbjct 1739 TAAGGGATTTTTCGTTTAAGCGATGA 1764 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87097945575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5