BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315417
Length=1587
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58260.1 | Symbols: CYP79C2, CYP79C3P | cytochrome p450 79c2... 2254 0.0
AT1G58265.1 | Symbols: | Cytochrome P450 superfamily protein |... 488 6e-137
> AT1G58260.1 | Symbols: CYP79C2, CYP79C3P | cytochrome p450 79c2
| chr1:21605752-21607995 FORWARD LENGTH=1593
Length=1593
Score = 2254 bits (1220), Expect = 0.0
Identities = 1475/1598 (92%), Gaps = 18/1598 (1%)
Strand=Plus/Plus
Query 1 ATGAGTATTATCACGAATCCATCTAGTTTCACACTTGTTTTAATTTCCATTACGCTGGTC 60
|||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGACTATTATCACGAATCCATCCAGTTTCACTCTTGTTTTAATTTCCATTACGCTGGTC 60
Query 61 CTAGCTCTTGCTAGACGATTTTCAAGATCCATGAAACCAAAAGGTCAACTTCCTCCCGGC 120
|| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||
Sbjct 61 CTGGCTCTTGCTAGACGTTTTTCAAGATTCATGAAACCAAAAGGTCAGCTTCCTCCCGGA 120
Query 121 CCACGGGGATGGCCAATCATTGGAAACATCCTCCAAATGATCATGAACCGACCGGCTCAC 180
|||||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||||
Sbjct 121 CCACGGGGATGGCCAATCGTTGGGAACATGCTCCAAATGATCATCAACCGGCCGGCTCAC 180
Query 181 TTGTGGATCCACCGTGTCATGGAAGAACTGCAAACGGAGATAGCTTGCTTCCGCTTTGCC 240
|||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct 181 TTGTGGATCCACCGCGTCATGGAAGAACTGCAGACGGATATAGCTTGCTACCGCTTTGCC 240
Query 241 AGTTTCCACGTCATCACCGTAACCTCAAGCGAGATTGCCCGTGAAGTGCTTAGGGAAAAA 300
||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 241 CGTTTCCATGTCATCACCGTGACCTCAAGCAAGATTGCCCGTGAAGTGCTTAGGGAAAAG 300
Query 301 GACGAGGTTCTTGCAGACAGGTCAGAGTCTTACGCCAGCTATCTCATAAGCAATGGCTAT 360
|| |||||||| ||||| ||||||||||| ||||| ||| ||||||||||| ||||||||
Sbjct 301 GATGAGGTTCTCGCAGATAGGTCAGAGTCATACGCGAGCCATCTCATAAGCCATGGCTAT 360
Query 361 AAGGGCATTACTTTCACTTCCTACGGAGAGAACTGGAAGCTGATGAAGAAATTGATGACC 420
||| |||| ||||| |||||||||||||||||||||||||| | |||||| ||||||||
Sbjct 361 AAGAACATTTCTTTCTCTTCCTACGGAGAGAACTGGAAGCTGGTAAAGAAAGTGATGACC 420
Query 421 ACCAAGCTTATGTCCCCGACAACATTGAGCAAAACCCTCGGTTACAGAAACATAGAAGCG 480
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 421 ACCAAACTTATGTCCCCGACAACATTGAGCAAAACCCTCGGTTATAGAAACATAGAAGCG 480
Query 481 GATAATATTGTCACATATGTCTACAATCTATGCCGAC-----T-AGTGACGAAGCCGATT 534
|||||||| ||||||||||||||||||||||||| || | ||||| |||||| |||
Sbjct 481 GATAATATCGTCACATATGTCTACAATCTATGCCAACTAGGGTCAGTGAGGAAGCCTATT 540
Query 535 AACGTGAGGGATACGATCTTAACTTATTCCCACGCCGTGATGATGAGGATGATGTTTGGC 594
|||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 541 AACGTGAGAGATACGATATTAACTTATTGCCACGCCGTGATGATGAGGATGATGTTTGGT 600
Query 595 CAGAGGCATTTTGATGAAGCT-GTAGAGATCGGCGGTCTCGGGCCAAAAGAGAAAGAGCA 653
||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct 601 CAGAGGCATTTTGATGAAG-TGGTAGAGAACGGCGGTCTCGGGCCAAAAGAGAAAGAGCA 659
Query 654 TATGGACGCAATATACCTAGCTCTTGATTGCTTTTTCAGCTTCAACTTAGCAAATTACAT 713
|||||||||||||||||| ||||||||||| ||||||||||| |||||| | ||||||||
Sbjct 660 TATGGACGCAATATACCTTGCTCTTGATTGTTTTTTCAGCTTTAACTTAACGAATTACAT 719
Query 714 CCCTTTTCTTAGTGGGTGGAACGTAGATAAAGAGGAGA-AGGAGGTAAGAGAAGCGGTTC 772
|||||||||||| || |||||||||||||||| ||||| | || ||||||||||||||||
Sbjct 720 CCCTTTTCTTAGAGGATGGAACGTAGATAAAGCGGAGACA-GAAGTAAGAGAAGCGGTTC 778
Query 773 ATATAATCAACAGATGTAACGACCCGATCATCCAAGCCAGAATACGTTTATGGAGGAAGA 832
|||||||||| | |||||| ||||| |||||||||| ||||||| ||||||||||||||
Sbjct 779 ATATAATCAATATATGTAATGACCCCATCATCCAAGAAAGAATACATTTATGGAGGAAGA 838
Query 833 AAGGCGGAAAAGC-TACGGAAGAAGACTGGCTCGATATCCTCATCACGTTAAAAGATGAT 891
|||| |||||| | | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 839 AAGGTGGAAAA-CAAATGGAAGAAGACTGGCTCGATATCCTTATCACGTTAAAAGATGAT 897
Query 892 CAAGGAATGCATTTGTACACATTTGATCAGATTAGGGCTCAATGCAAGGAAATCAAT-TT 950
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 898 CAAGGAATGCATTTGTTCACATTTGATGAGATTAGGGCTCAATGCAAGGAAATCAATCTT 957
Query 951 AGCAACAATTGACAATATGATGAATAACGTGGAGTGGACGATAGCGGAGATGTTGAATCA 1010
|||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||
Sbjct 958 -GCAACAATTGACAATACGATGAATAACGTGGAGTGGACGATCGCGGAGATGTTAAATCA 1016
Query 1011 CCCAGAGATTCTTGAGAAAGCCACAAATGAATTGGACATGATAGTTGGGAAAGACAGACT 1070
||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||
Sbjct 1017 CCCAGAGATTCTTGAGAAAGCCACAAATGAACTGGACATAATAGTTGGTAAAGACAGACT 1076
Query 1071 TGTGCAAGAATCAGACATACCAAAACTCAACTACATCAAAGCTTGTAGCAAAGAATCTTT 1130
||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||
Sbjct 1077 TGTGCAAGAATCAGACATATCACAACTCAACTACATCAAAGCATGTAGCAAAGAATCTTT 1136
Query 1131 TCGTCTTCACCCTGCTAATGTGTTCATGCCCCATCATGTAGCCCGAGAAGATACTACCCT 1190
||| |||||||| |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1137 TCGGCTTCACCCAGCTAATGTGTTCATGCCCCATCATGTTGCAAGAGAAGATACTACCCT 1196
Query 1191 CGCGGGTTACTTTGTTCCCAAAGGTAGTCAAATTCTTGTGAGCCGTGTGGGGCTTGGTCG 1250
||||||||| ||||| |||||||| ||||||||||||||||| ||| |||||||||||||
Sbjct 1197 CGCGGGTTATTTTGTCCCCAAAGGCAGTCAAATTCTTGTGAGTCGTTTGGGGCTTGGTCG 1256
Query 1251 GAATCCTAAAATATGGGACGAGCCTAACACGTTCAAGCCCGAAAGACACCTCGATGGCCA 1310
|||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||
Sbjct 1257 GAATCCTAAAATATGGGACGAGCCTAACGCGTTCAAGCCAGAAAGATACCTTGATGGCCA 1316
Query 1311 TGTCGAGAACTCATTGGGCGTGACTCTGATGGAACCGGAGATGCTG-TTCGTTACATTCG 1369
||||||||| ||||||||||||||| ||||||||||||| |||| | |||||||||||||
Sbjct 1317 TGTCGAGAAGTCATTGGGCGTGACTTTGATGGAACCGGACATGC-GATTCGTTACATTCG 1375
Query 1370 GTACCGGTCGGCGTAGCTGCCCAGGCACTAAGATTGGGACATCTATGACCATCATGTTGT 1429
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1376 GCACCGGTCGGCGTAGCTGTCCGGGCACTAAGATTGGGACATCTATGACCATCATGTTGT 1435
Query 1430 TAGCCAGGCTTCTCCAAGGGTTCGAATGGACTCTCCCTAATGGTAAAA-CTCAAGTCGAA 1488
||||||||||| ||||||||||||||||||||||||||| |||||||| || ||| ||
Sbjct 1436 TAGCCAGGCTTATCCAAGGGTTCGAATGGACTCTCCCTATTGGTAAAAGTTC-AGTGGAG 1494
Query 1489 CTCATTTCGGCGGAGAGCAACTTGTTTATGGCCAAGCCTCTACTCGCATGCGCGAAACCT 1548
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CTCATTTCGGCGGAGAGTAACTTGTTTATGGCCAAGCCTCTACTCGCATGCGCGAAACCT 1554
Query 1549 AGGTTGGCTCCAAGTTTATATCCGAAAATCCAGTTCTA 1586
||||||||||||||||||||||||||||||||| ||||
Sbjct 1555 AGGTTGGCTCCAAGTTTATATCCGAAAATCCAGATCTA 1592
> AT1G58265.1 | Symbols: | Cytochrome P450 superfamily protein
| chr1:21610909-21611388 FORWARD LENGTH=480
Length=480
Score = 488 bits (264), Expect = 6e-137
Identities = 335/370 (91%), Gaps = 1/370 (0%)
Strand=Plus/Plus
Query 1212 AGGTAGTCAAATTCTTGTGAGCCGTGTGGGGCTTGGTCGGAATCCTAAAATATGGGACGA 1271
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 33 AGGTAGTCAAATTCTTGTGAGCCGTTTGGGGCTTGGTCGGAATCCTAAAATATGGGATGA 92
Query 1272 GCCTAACACGTTCAAGCCCGAAAGACACCTCGATGGCCATGTCGAGAACTCATTGGGCGT 1331
|||||||| ||||||| | || ||||||||||||||||||||| |||||||| |||| |
Sbjct 93 GCCTAACATGTTCAAGACAGAGAGACACCTCGATGGCCATGTCAAGAACTCACTGGGTTT 152
Query 1332 GACTCTGATGGAACCGGAGATGCTGTTCGTTACATTCGGTACCGGTCGGCGTAGCTGCCC 1391
||||||| |||| ||||| |||| ||||||||||||||| ||||||| |||||||||||
Sbjct 153 GACTCTGTTGGAGCCGGACATGCGGTTCGTTACATTCGGCACCGGTCACCGTAGCTGCCC 212
Query 1392 AGGCACTAAGATTGGGACATCTATGACCATCATGTTGTTAGCCAGGCTTCTCCAAGGGTT 1451
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 213 AACCACTAAGATTGGGACATCTATGACCATCATGTCGTTAGCCAGGCTTCTCCAAGGGTT 272
Query 1452 CGAATGGACTCTCCCTAATGGTAAAACTCAAGTCGAACTCATTTCGGCGGAGAGCAACTT 1511
||||||||||||||||||||| |||| |||| |||||||||| || ||||| || |||||
Sbjct 273 CGAATGGACTCTCCCTAATGGAAAAATTCAACTCGAACTCATCTCAGCGGAAAGTAACTT 332
Query 1512 GTTTATGGCCAAGCCTCTACTCGCATGCGCGAAACCTAGGTTGGCTCCAAGTTTATATCC 1571
|||||| |||||||||||||||| || |||||| || | ||||||||||||||||||||
Sbjct 333 GTTTATCGCCAAGCCTCTACTCGGATCCGCGAA-CCAATTTTGGCTCCAAGTTTATATCC 391
Query 1572 GAAAATCCAG 1581
|||||| |||
Sbjct 392 GAAAATTCAG 401
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78363050745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5