BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315482
Length=1137
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65250.1 | Symbols: | Protein kinase superfamily protein | ... 756 0.0
AT1G65190.1 | Symbols: | Protein kinase superfamily protein | ... 749 0.0
AT5G35796.1 | Symbols: | pseudogene, similar to Putative prote... 717 0.0
AT1G67470.1 | Symbols: | Protein kinase superfamily protein | ... 689 0.0
> AT1G65250.1 | Symbols: | Protein kinase superfamily protein
| chr1:24234338-24235808 FORWARD LENGTH=1471
Length=1471
Score = 756 bits (409), Expect = 0.0
Identities = 632/735 (86%), Gaps = 33/735 (4%)
Strand=Plus/Plus
Query 43 GAGAGAGGGGCGATGGTGTTGA-AAGATCTGATCGAAT-TAGGCCATGGCATATCCAATC 100
||||||||||| | | |||| | |||| || ||||||| | || |||||| ||||||||
Sbjct 143 GAGAGAGGGGCCAAGTTGTT-AGAAGAGCTCATCGAATGT-TGCGATGGCAAATCCAATC 200
Query 101 CCATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAATTTCAGCAAATCTA 160
|||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct 201 CCATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACGATTTCAGCGACTCTA 260
Query 161 ATCATGTTTTTA-GATTAGCTTATTAC-TCCGATTGGTATTCAGGTAAGAACGAGAACCA 218
|| |||||| | |||||| || | | | | |||||||| |||||||||||||| ||
Sbjct 261 ATTTTGTTTT-ACGATTAGAAG-TTCCCTTCAAATGGTATTCTGGTAAGAACGAGAATCA 318
Query 219 TCCCATGATACTCATCAAGAAACG-TGCTCGCTTTTGGAG---CTTGAG-GACAGATC-T 272
|||||||||||| ||||||||| | || | ||| ||||| |||||| | ||||| |
Sbjct 319 TCCCATGATACTAATCAAGAAA-GATGTTGGCTGGTGGAGTGGCTTGAGAGT-AGATCGT 376
Query 273 TATGTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTTTTGAAATT 332
| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 377 T-TGTGCCGCGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTCATGAAGTT 435
Query 333 GGTTGGATGTTGTCTTGAGTTGGAAAAGCCAGTCTTGGTTTATCATGGTGTAAAGAAACA 392
||||||||||||||||||||| || | |||||| |||| |||||| |||| ||||||||
Sbjct 436 GGTTGGATGTTGTCTTGAGTTAGATTATCCAGTCATGGTGTATCATAGTGTTAAGAAACA 495
Query 393 TTATCAA-TTA-ATAATAAGTGAGCAGACGTGGAAAAGGAGAATGAAGATAGCAGAAGAT 450
||| ||| ||| | ||||||||| ||| | ||||||| ||||||||||||||||||||||
Sbjct 496 TTA-CAAATTAGA-AATAAGTGAACAGCCATGGAAAAAGAGAATGAAGATAGCAGAAGAT 553
Query 451 ATCGCTACTGCTTTAGCTTACCTTCACACTGCGTTCCCTAGGCCCTTCGTATATACGAGT 510
||||||||||||||||||||||||||||| || |||||||||||||| ||||||| || |
Sbjct 554 ATCGCTACTGCTTTAGCTTACCTTCACACCGCCTTCCCTAGGCCCTTTGTATATAGGATT 613
Query 511 TTGTCT-ATTGAGAATATCTTATTGGATGAAGATGGGGTCGCCAAGCTGATTGATTTCTC 569
|||||| |||| |||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 614 TTGTCTCATTG-GAATATCTTATTGGATGAAGATGGTGTCGCCAAGCTGACTGATTTCTC 672
Query 570 TCTCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTCCAGGTTGACAGAGAAGATATCTT 629
|| ||||||||||||||||||||||||||||||||||| |||||||||||| | |
Sbjct 673 TCACTGCGTCTCAATCCCAGAAGGAGAAACATTTGTCCGGGTTGACAGAGACG-TGGG-- 729
Query 630 ATTATATAGTTACTTGGAC-GATAGTTACATGATGAGCAGTGGCGTAGTCTCAGAGAAAA 688
||||||||||||||| | | |||| |||| | | | | |||||| |||||||||| ||||
Sbjct 730 ATTATATAGTTACTTTG-CTGATAATTACGTTA-G-G-AGTGGCCTAGTCTCAGATAAAA 785
Query 689 CAGATGTCTTTGCCTTTGGAATGTTTATGGGTCTATCG-CTTCTATTAGGAAACCAATAT 747
|||||||||||||||||||||| |||||||||| || | |||||||||||| || ||||
Sbjct 786 CAGATGTCTTTGCCTTTGGAATCTTTATGGGTC-ATAGGCTTCTATTAGGATACGAATAC 844
Query 748 TATTTTGAGTATTAT 762
||||| ||| |||||
Sbjct 845 TATTTCGAGCATTAT 859
Score = 320 bits (173), Expect = 2e-86
Identities = 219/240 (91%), Gaps = 7/240 (3%)
Strand=Plus/Plus
Query 761 ATGCT-GGATATTGGCTGTCAAAATTAAAGGAAGACCGACGAATGGAAGAGATTGCAGA- 818
||||| ||| ||| ||| |||| ||||||||||||| ||| ||||||||||||||||||
Sbjct 912 ATGCTCGGA-ATTTGCTCTCAACATTAAAGGAAGACAGACCAATGGAAGAGATTGCAGAT 970
Query 819 TCGAAAGATGATAGAAAAGATGGGTCAAATTTCAGAACAAGAGCTTTGTCAAATGGAAGC 878
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 971 TC-AAAGATGATAGAAAAGATGGGTCAAATTTCAGAACAAGAGCGTTGTCAAATGAAAGC 1029
Query 879 TTTC-CGAATGCTCTCACTGAGATGCATCGGTCCTAGTGAAGAAGTTCCAACGATGGTGG 937
|||| ||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1030 TTTCTTGAA-GCTATCACTGAGATGCACCGGCCCTAGTGAAGAAGTTCCAACGATGGTGG 1088
Query 938 AAGTGGCCAAAGAACTAAAGAAGATTCAAACATCTCTTTATAACGACTCTTCTTCTACTT 997
||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||
Sbjct 1089 AAGTGGCCAAAGAACTAAACAAGATTCAAAGATCTCTTTTTAACGACTCTTCTTCT-CTT 1147
> AT1G65190.1 | Symbols: | Protein kinase superfamily protein
| chr1:24215644-24217328 REVERSE LENGTH=1685
Length=1685
Score = 749 bits (405), Expect = 0.0
Identities = 665/783 (85%), Gaps = 48/783 (6%)
Strand=Plus/Plus
Query 1 ATGGGTTGGTTTTGGAGGAAG-AG-----GAATAAGAAGCGA-ACATTGGAGAGAGGGGC 53
||||||||||| ||||||||| || ||||||||||| | | |||||||||||| ||
Sbjct 111 ATGGGTTGGTTGTGGAGGAAGAAGAAAAAGAATAAGAAGCTAGA-ATTGGAGAGAGGAGC 169
Query 54 GATGGTGTTGA-AAGATCTGATCGAAT-TAGGCCATGGCATATCCAATCCCATCAAATTC 111
| | |||| | |||| || ||||||| | || |||||| |||||||||||||||||||
Sbjct 170 CAAGTTGTT-AGAAGAGCTCATCGAATGT-TGCGATGGCAAATCCAATCCCATCAAATTC 227
Query 112 TTCTCTGCTGATGAGATCCTCAAAGCCACCAACAATTTCAGCAAATCTAATCATGTT-TT 170
||||||||||||||||||| |||||||||||||| ||||||| | ||||||| |||| |
Sbjct 228 TTCTCTGCTGATGAGATCCGCAAAGCCACCAACATTTTCAGCCACTCTAATCTTGTTCAT 287
Query 171 TA-GATTAG-CTTATTACT-CCGATTGGTATTCAGGTAAGAACGAGAACCATCCCATGAT 227
| || || || ||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 288 CAGGA--AGAATT-TTACTGCC-AATGGTATTCAGGTAAGAACGAGAACCATCCCATGAT 343
Query 228 ACTCATCAAGAAACGTGCTCGCTTTTG-GAGCTTGAGGACAGATCTTATGTGCCGGGACA 286
|||||||| |||| | | || || ||| |||| ||||||| ||||||| |||
Sbjct 344 ACTCATCAGGAAA---GAT-TCTAATGTGAG-GGGAGG--AGATCTTGTGTGCCGCAACA 396
Query 287 TAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTTTTGAAATTGGTTGGATGTTGTC 346
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 397 TAGCAGTTTCATCGATGGTGAGTGGTCACAAGAACTTTATGAAATTGGTTGGATGTTGTC 456
Query 347 TTGAGTTGGAAA-AGCCAGTCTTGGTTTATCATGGTGTAAAGAAACATTATCAATTA-AT 404
||||||| |||| | |||||| ||| ||||||||||| |||||||||||| |||| |
Sbjct 457 TTGAGTT-GAAATATCCAGTCACGGTCTATCATGGTGTTAAGAAACATTATGGATTAGA- 514
Query 405 AATAAG-TGAGCAGACGTGGAAAAGGAGAATGAAGATAGCAGAAGATATCGCTACTGCTT 463
||| || |||| || |||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 515 AAT-AGATGAGAAGCCGTGGAAAAGAAGAATGAAGATAGCAGAAGATATCGCCACTGCTT 573
Query 464 TAGCTTACCTTCACACTGCGTTCCCTAGGCCCTTCGTATATACGAGTTTGTCT-ATTGAG 522
||||||||||||||||||| |||||||||||| ||||||||| || ||||||| || | |
Sbjct 574 TAGCTTACCTTCACACTGCCTTCCCTAGGCCCCTCGTATATATGATTTTGTCTCATCG-G 632
Query 523 AATATCTTATTGGATGAAGATGGGGTCGCCAAGCTGATTGATTTCTCTCTCTGCGTCTCA 582
||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||
Sbjct 633 AATATCTTATTGGATGAAGATGGTGTCGCGAAGCTGACTGATTTCTCTCACTGCGTCTCA 692
Query 583 ATCCCAGAAGGAGAAACATTTGTCCAGGTTGACAG-AGAAGATATCTTATTATATAGTTA 641
||||||||||||||||||||||||| |||||| | ||||| || ||| ||||||||
Sbjct 693 ATCCCAGAAGGAGAAACATTTGTCCGGGTTGA-GGCAGAAG--AT-GGATTCTATAGTTA 748
Query 642 CTTGGAC-GATAGTTACATGATGAGCAGTGGCGTAGTCTCAGAGAAAACAGATGTCTTTG 700
||| | | |||| |||| | | | ||||| ||||||||||||||||||||||||||||
Sbjct 749 CTTTG-CTGATAATTAC--G-TTAACAGTGTTGTAGTCTCAGAGAAAACAGATGTCTTTG 804
Query 701 CCTTTGGAATGTTTATGGGTCTATCGCTTCTATTAGGAAACCAATAT-TATTTTGAGTAT 759
|||||||||| |||||||||||| |||||||||||||| || || | ||||| ||| ||
Sbjct 805 CCTTTGGAATCTTTATGGGTCTAACGCTTCTATTAGGATACAAA-AGCTATTTCGAGCAT 863
Query 760 TAT 762
|||
Sbjct 864 TAT 866
Score = 387 bits (209), Expect = 2e-106
Identities = 329/382 (86%), Gaps = 28/382 (7%)
Strand=Plus/Plus
Query 761 ATGCTGGATATTGGCTGTCAAAATTAAAGGAAGACCGACGAATGGAAGAGATTGCAGATC 820
||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 943 ATGCTCGATATTGGCTGTCAAAATTAAAGAAAGACCGACCAATGGAAGAGATTGCAGATC 1002
Query 821 GAAAGATGATAGAAAAGATGGGTCAAAT-TTCAGAACAAGAGCT-TTGTCAAATGGAAGC 878
||||||||||| |||| ||||||||||| || |||||||||||| || ||||||| ||||
Sbjct 1003 GAAAGATGATAAAAAATATGGGTCAAATCTT-AGAACAAGAGCTCTT-TCAAATGAAAGC 1060
Query 879 TTTCCGAATGCTCTCACTGAGATGCATCGGTCCTAGTGAAGAAGTTCCAACGATGGTGGA 938
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1061 TTTCCGGATGCTCTCACTGAGATGCATGGGTCCTAGTGAAGAAGTTCCAACGATGGTGGA 1120
Query 939 AGTGGCCAAAGAACTAAAGAAGATTCAAACATCTCTTTATAACGACTCTTCTTCTACTTC 998
||||||||||||||||||||||| |||| ||||||| |||| || | | ||| | |
Sbjct 1121 GGTGGCCAAAGAACTAAAGAAGATCCAAAAATCTCTTAATAAAGA-T-T-CTTAT-CG-- 1174
Query 999 AGGTGAAAAAGAAGAAAGTGAAGAACTAAAGAAGATCCAAAGATCTCCTTATAACGACTC 1058
||| ||| |||||||| | ||||| | |||||| || | | | | | ||||||
Sbjct 1175 AGGAGAAGAAGAAGAA-G--AAGAA--AGTGAAGATG-AA---T-T--T-A-A-CGACTC 1219
Query 1059 TTCTTCTC---CTTCAGGTGAAACCCAATTCGACTCTGCCCAAGACATTTCTTCCTCAGT 1115
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1220 TTCTTCTCTTTCTTCAGGTCAAACCCAATTCGACTCTGCCCAAGACATTTCTTCCACAGT 1279
Query 1116 CGTCGTCTCAAACCAGACTTAA 1137
||| |||||||||| ||||||
Sbjct 1280 GGTCCTCTCAAACCAAACTTAA 1301
> AT5G35796.1 | Symbols: | pseudogene, similar to Putative protein
kinase, blastp match of 29% identity and 1.6e-16 P-value
to GP|21671940|gb|AAM74302.1|AC083944_20|AC083944 Putative
protein kinase {Oryza sativa (japonica cultivar-group)} | chr5:13968537-13969932
REVERSE LENGTH=1396
Length=1396
Score = 717 bits (388), Expect = 0.0
Identities = 608/710 (86%), Gaps = 31/710 (4%)
Strand=Plus/Plus
Query 44 AGAGAGGGGCGATGGTGTTGA-AAGATCTGATCGAATTAGGCCATGGCATATCCAATCCC 102
|||||||||| | | |||| | |||| || |||||||| |||||||||| ||||||||||
Sbjct 82 AGAGAGGGGCCAAGTTGTT-AGAAGAGCTCATCGAATTCGGCCATGGCAAATCCAATCCC 140
Query 103 ATCAAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAATTTCAGCAAATCTAAT 162
|||||||||||||||| ||||||||||| ||| |||||||||||||||||| | |||||
Sbjct 141 ATCAAATTCTTCTCTGGTGATGAGATCCGCAATGCCACCAACAATTTCAGC-GA-CTAAT 198
Query 163 CATGTTTTTAGATTAG-CTTATTACT-CCGATTGGTATTCAGGTAAGAACGAGAACCATC 220
| ||||| | || || || ||||| || | ||||||||||||||||||||||||||||
Sbjct 199 CTTGTTTCTCGAAAAGAATT-TTACTACC-ACTGGTATTCAGGTAAGAACGAGAACCATC 256
Query 221 CCATGATACTCATCAAGAAACG-TGC-TCGCTTTTGGAG---CTT-GAGGACAGATCTTA 274
||||||| ||||| |||||| | | | | |||| | ||| ||| | | |||||||
Sbjct 257 CCATGATTCTCATTAAGAAA-GAT-CTTGGCTTGTCGAGTCTCTTCAAAG-TAGATCTTT 313
Query 275 TGTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTTTTGAAATTGG 334
|| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 314 TGAGCCGCGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAACCTTTTTGAAATTGG 373
Query 335 TTGGATGTTGTCTTGAGTTGGAAAAGCCAGTCTTGGTTTATCATGGTGTAAAGAAACATT 394
||||||||||||||||||| ||| | ||||| |||||||||||||| ||||||||||
Sbjct 374 TTGGATGTTGTCTTGAGTTTGAAGATTCAGTCAAAGTTTATCATGGTGTTAAGAAACATT 433
Query 395 ATC-AATTA-ATAATAAGTGAGCAGACGTGGAAAAGGAGAATGAAGATAGCAGAAGATAT 452
| | ||||| | ||||||||| || | |||||||||||||||||||||| ||||||||
Sbjct 434 A-CAAATTAGA-AATAAGTGAACATCCATGGAAAAGGAGAATGAAGATAGTTGAAGATAT 491
Query 453 CGCTACTGCTTTAGCTTACCTTCACACTGCGTTCCCTAGGCCCTTCGTATATACGAGTTT 512
|||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||
Sbjct 492 TGCTACTGCTTTAGCTTACCTTCACACTGCGTTCCCTAGGCTCTTTGTATATAGGATTTT 551
Query 513 GTCT-ATTGAGAATATCTTATTGGATGAAGATGGGGTCGCCAAGCTGATTGATTTCTCTC 571
|||| |||| |||||| ||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct 552 GTCTCATTG-GAATATTTTATTGGATGAAGATGGGGTCGCGAAGCTGACTGATTTTTCTC 610
Query 572 TCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTCCAGGTTGACAG-AGAAGATATCTTA 630
|||||||| ||| ||||||||||| ||||||||||||||||| | || ||| |
Sbjct 611 ACTGCGTCTGAATTCCAGAAGGAGACACATTTGTCCAGGTTGAG-GCAGCAGAGGG---A 666
Query 631 TTATATAGTTACTTGGACGATAGTTACATGATGAGCAGTGGCGTAGTCTCAGAGAAAACA 690
|| ||||||||||| | ||||| |||||| | |||||||||||||||||||||| ||||
Sbjct 667 TTCTATAGTTACTTTGCCGATAATTACAT--T-AGCAGTGGCGTAGTCTCAGAGAGAACA 723
Query 691 GATGTCTTTGCCTTTGGAATGTTTATGGGTCTATCGCTTCTATTAGGAAA 740
|||||||||| ||||||||||||||||||| || |||||||||||||||
Sbjct 724 GATGTCTTTGGCTTTGGAATGTTTATGGGTATAAGGCTTCTATTAGGAAA 773
Score = 326 bits (176), Expect = 4e-88
Identities = 218/238 (92%), Gaps = 3/238 (1%)
Strand=Plus/Plus
Query 761 ATGCTGGATATTGGCTGTCAAAATTAAAGGAAGACCGA-CGAATGGAAGAGATTGCAGAT 819
||||| || ||| |||||||| |||||||||||||||| | |||||||||||||||||||
Sbjct 846 ATGCTCGAAATTTGCTGTCAACATTAAAGGAAGACCGATC-AATGGAAGAGATTGCAGAT 904
Query 820 CGAAAGATGATAGAAAAGATGGGTCAAATTTCAGAACAAGAGCTTTGTCAAATGGAAGCT 879
| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||
Sbjct 905 CCAAAGATGATAGAAAAGATGGGTCAAATTTCCGAAGAAGAGCTTTGTCAAATGAAAGCT 964
Query 880 TTCCGAATGCTCTCACTGAGATGCATCGGTCCTAGTGAAGAAGTTCCAACGATGGTGGAA 939
||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 965 TTCCGAATGTTGTCACTGAGATGCATGGGTCCTAGTGAAGAAGTTCCAACGATGGTGGAA 1024
Query 940 GTGGCCAAAGAACTAAAGAAGATTCAAACATCTCTTTATAACGACTCTTCTTCTACTT 997
|| | ||||||||||||||| || |||| |||||||| |||||||||||||||| |||
Sbjct 1025 GTTGTCAAAGAACTAAAGAAAATCCAAAGATCTCTTTTTAACGACTCTTCTTCT-CTT 1081
> AT1G67470.1 | Symbols: | Protein kinase superfamily protein
| chr1:25272182-25273576 FORWARD LENGTH=1395
Length=1395
Score = 689 bits (373), Expect = 0.0
Identities = 796/990 (80%), Gaps = 70/990 (7%)
Strand=Plus/Plus
Query 46 AGAGGGGCGATGGTGTTGAAAGATCTGATCGAATTAGGCCATGGCATATCCAATCCCATC 105
||||| |||| | |||| |||||||||||||||| || |||||| |||||||||||||
Sbjct 117 AGAGGAGCGAAGCTGTTAAAAGATCTGATCGAATGCTGCGATGGCAAATCCAATCCCATC 176
Query 106 AAATTCTTCTCTGCTGATGAGATCCTCAAAGCCACCAACAATTTCAGCAAATCTAATCAT 165
|||||||| |||||||||||||||| ||||||||||||||||||| || ||||||| |
Sbjct 177 AAATTCTTTTCTGCTGATGAGATCCGCAAAGCCACCAACAATTTCGGCGTGTCTAATCTT 236
Query 166 GTTTTTAG-ATTAGCT--T-A--TT-ACTCCGATTGGTATTCAGGTAAGAACGAGAACCA 218
| ||| | |||| || | | || ||| | | ||||||||||| ||||||||||||||
Sbjct 237 G-TTTCCGAATTATCTCATGATTTTGACTACAAATGGTATTCAGGCAAGAACGAGAACCA 295
Query 219 TCCCATGATACTCATCAAGAAA-CGTGCTCGCTTTTGGAGCTTGAGGAC--AGAT-C-TT 273
| ||||||||| ||| |||| | | || | | | | | | || |||| | ||
Sbjct 296 TGACATGATACTTGTCAGGAAAGCTTTTTCCCAGTCCG-TC-T-ACTACAAAGATACATT 352
Query 274 ATGTGCCGGGACATAGCAGTTTCATCGATGGTGAGTGGTCACAAAAACTTTTTGAAATTG 333
| | ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 353 -T-TTCCGCGACATAGCAGTTTCATCAATGGTGAGTGGTCACAAAAACTTCCTGAAATTG 410
Query 334 GTTGGATGTTGTCTTGAGTTGGAAAAGCCAGTCTTGGTTTATCATGGTGTAAAGAAACAT 393
|||||| |||||||||||| ||| |||||||| |||||||||||||||| |||||||||
Sbjct 411 ATTGGATATTGTCTTGAGTTTGAAGAGCCAGTCATGGTTTATCATGGTGTCAAGAAACAT 470
Query 394 TATCAATTAATAAT-AAGTGAGCAGACGTGGAAAAGGAGAATGAAGATAGCAGAAGATAT 452
|||| ||| | ||| |||||| ||| |||||||||||||||||||||||||||| |||||
Sbjct 471 TATC-ATTTAGAATCAAGTGAACAGCCGTGGAAAAGGAGAATGAAGATAGCAGAGGATAT 529
Query 453 CGCTACTGCTTTAGCTTACCTTCACACTGCGTTCCCTAGGCCCTTCGTATATACGAGTTT 512
||||||||||||||||||||||||||| || ||||| |||||||||||||||| | ||||
Sbjct 530 CGCTACTGCTTTAGCTTACCTTCACACCGCCTTCCCAAGGCCCTTCGTATATAGGTGTTT 589
Query 513 GTCTATTGA-GAATATCTTATTGGATGAAGATGGGGTCGCCAAGCTGATTGATTTCTCTC 571
|||| || | |||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 590 GTCTCTT-ACGAATATATTATTGGATGAAGATGGTGTCGCGAAGCTGATGGATTTCTCTT 648
Query 572 TCTGCGTCTCAATCCCAGAAGGAGAAACATTTGTCCAGGTTGAC-AGAGAA-GATATCTT 629
||||||||||||| |||||||||||||||||||||||||||||| | | | | | |
Sbjct 649 TCTGCGTCTCAATACCAGAAGGAGAAACATTTGTCCAGGTTGACTATATAGCGGGAAC-- 706
Query 630 ATTATATAGTTACTTGGA-CGATAGTTACATGATGAGCAGTGGCGTAGTCTCAGAGAAAA 688
| | | | ||||||| | | || |||| ||| |||| ||| |||||||||||| |||
Sbjct 707 AGT-TG-A-TTACTTGAAGCC-TAATTACTTGA--AGCA-TGGTGTAGTCTCAGAGGAAA 759
Query 689 CAGATGTCTTTGCCTTTGGA-ATGTTTATGGGTCTA-TCGCTTCTATTAGG--AAACCAA 744
| |||||||||||| ||||| || | ||| | | | ||||||| | || ||| ||
Sbjct 760 CGGATGTCTTTGCCGTTGGACAT-TCCATG---CAAAT-GCTTCTAATGGGGGAAAA-AA 813
Query 745 TATTATTTTGAGTATTATGCTG--GAT-ATTGGCTG--TCAAAATTAAAGGAAGA-CCGA 798
|||| | | || |||||| | || ||| || |||||||| | |||||| || |
Sbjct 814 TATT-TGAT-AGGATTATGA-GAAGACCATTTCCTACATCAAAATTTATGGAAGAGCCAA 870
Query 799 CGAATGGAAGAGATTGCAGATCGAAAGATGATAGAAAAGATGGGTCAAATTTCAGAACAA 858
|||||| ||||||||||||| | | | || | | | | ||||||||||| ||
Sbjct 871 A-AATGGATGAGATTGCAGATCCAGA-A--AT-G----G--GCG--AAATTTCAGAAGAA 917
Query 859 GAGCTTTGTCAAATGGAAGCTTTCCGAATGCTCTCACTGAGATGCATCGGTCCTAGT-GA 917
||||||||||||||| ||||||||| | |||||||||||||||||| ||||| | || |
Sbjct 918 GAGCTTTGTCAAATGAAAGCTTTCCTATTGCTCTCACTGAGATGCACCGGTCAT-GTTGG 976
Query 918 AGAAGTTCCAACGATGGTGGAAGTGGCCAAAGAACTAAAGAAG-ATTCAAACATCTCTTT 976
||||||||||| |||||||||||||| ||||||||||||| | ||||||| || ||||
Sbjct 977 GGAAGTTCCAACTATGGTGGAAGTGGCTAAAGAACTAAAGA-GTATTCAAAGATGTCTTC 1035
Query 977 ATAACGACTCTTCTTCTACTTCAGGTGAAA 1006
| || ||| ||| |||| |||||| |||||
Sbjct 1036 ACAATGACACTTTTTCTCCTTCAGTTGAAA 1065
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55772805495
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5