BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315487
Length=1422
Score E
Sequences producing significant alignments: (Bits) Value
AT1G65240.1 | Symbols: | Eukaryotic aspartyl protease family p... 2261 0.0
AT5G36260.1 | Symbols: | Eukaryotic aspartyl protease family p... 647 0.0
> AT1G65240.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr1:24230867-24233349 REVERSE LENGTH=1524
Length=1524
Score = 2261 bits (1224), Expect = 0.0
Identities = 1360/1426 (95%), Gaps = 7/1426 (0%)
Strand=Plus/Plus
Query 1 ATGGAACTGAGGAGAAAATTGTGCATTGTGGTTGCAGTTTTCGTAATTGTGAACGAATTT 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1 ATGGAACTGAGGAGAAAATTGTGCATTGTGGTTGCAGTTTTCGTAATTGTGATCGAATTT 60
Query 61 GCATCAGGCAATTTCGTGTTTAAGGTACAACACAAGTTCGCAGGGAAAG-AGAAGAAGCT 119
||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||| ||
Sbjct 61 GCATCAGCCAATTTCGTGTTTAAGGCACAACACAAGTTCGCAGGG-AAGAAGAAGAACCT 119
Query 120 CGAGCATTTCAAGTCTCATGACACGCGCCGCCACTCTCGGATGCTCGCTTCCATTGATCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CGAGCATTTCAAGTCTCATGACACGCGCCGCCACTCTCGGATGCTCGCTTCCATTGATCT 179
Query 180 CCCTCTTGGCGGAGACAGCCGCGTAGACTCTGTCGGATTATACTTCACTAAAATCAAGCT 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 180 CCCTCTTGGCGGAGACAGCCGCGTAGACTCTGTCGGTTTATACTTCACTAAAATCAAGCT 239
Query 240 CGGGTCGCCACCAAAGGAATATCATGTACAAGTTGATACAGGAAGTGATATACTTTGGGT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 240 AGGGTCGCCACCAAAGGAATATCATGTACAAGTTGATACAGGAAGTGATATACTTTGGAT 299
Query 300 CAATTGCAAGCCGTGTCCAGAATGTCCCTCGAAAACTAATTTGAATTTCCATTTATCGTT 359
|||||||||||||||||| |||||||| ||||||||||||||||||| | |||||||||
Sbjct 300 AAATTGCAAGCCGTGTCCAAAATGTCCCACGAAAACTAATTTGAATTTTCGTTTATCGTT 359
Query 360 GTTCGACGTGAATGCTTCTTCGACTTCAAAGAAGGTTGGTTGTGATGATGATTTTTGCTC 419
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 360 GTTCGACATGAATGCTTCTTCGACTTCGAAGAAGGTTGGTTGTGATGATGATTTTTGCTC 419
Query 420 TTTCATTTCGCAATCGGATAGCTGCCAACCCGCTGTTGGATGTAGTTATCACATTGTCTA 479
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 420 TTTCATTTCGCAATCGGATAGCTGTCAACCCGCTCTTGGATGTAGTTATCACATTGTCTA 479
Query 480 TGCGGATGAGAGTACAAGTGAAGGTAACTTTATAAGGGACAAGTTAACTCTAGAACAAGT 539
|||||| || || |||||||| || || ||||||||||||| |||||| || ||||||||
Sbjct 480 TGCGGACGAAAGCACAAGTGATGGAAAGTTTATAAGGGACATGTTAACACTTGAACAAGT 539
Query 540 TACTGGAGATCTTCAAACTGGACCACTTGGTCAAGAAGTTGTATTCGGGTGTGGAAGTGA 599
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TACTGGCGATCTTAAAACTGGACCACTTGGTCAAGAAGTTGTATTCGGGTGTGGAAGTGA 599
Query 600 TCAATCTGGACAACTTGGGAA-GAGTGACTCAGCAGTTGATGGTGTTATGGGTTTTGGAC 658
||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| |
Sbjct 600 TCAATCTGGACAACTTGGGAATG-GTGACTCAGCAGTTGATGGTGTTATGGGATTTGGGC 658
Query 659 AATCAAATACCTCTGTTCTTTCACAACTAGCTGCCACGGGCGATGCGAAAAGAGTTTTTT 718
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 AATCAAATACCTCTGTCCTTTCACAACTAGCTGCCACGGGCGATGCGAAAAGAGTTTTTT 718
Query 719 CGCATTGCTTGGATAATGTTAAAGGAGGTGGGATTTTTGCTGTTGGTGTTGTGGATTCTC 778
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 719 CGCATTGCTTGGATAATGTTAAAGGAGGTGGGATTTTTGCTGTTGGTGTAGTGGATTCTC 778
Query 779 CAAAAGTTAAAACAACCCCTATGGTACCTAATCAGATGCATTACAATGTAATGTTGATGG 838
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 CAAAAGTTAAAACAACTCCTATGGTACCTAATCAGATGCATTACAATGTAATGTTGATGG 838
Query 839 GAATGGATGTGGATGGAACTGCCCTTGACCTTCCACCAAGTATTATGAGGAACGGAGGAA 898
|||||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||
Sbjct 839 GAATGGATGTGGATGGAACTTCTCTTGACCTTCCACGAAGTATTGTGAGGAACGGAGGAA 898
Query 899 CCATTGTTGATAGTGGTACAACTTTGGCTTACTTTCCAAAGGTTCTTTATGACTCCCTAA 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 899 CCATTGTTGATAGTGGTACAACTTTGGCTTACTTTCCAAAGGTTCTTTATGACTCCTTAA 958
Query 959 TAGAAACGATTCTTGCTCGTCAACCTGTAAAACTTCACATAGTAGAGGACACCTTCCAAT 1018
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 959 TAGAAACGATTCTTGCTCGTCAACCTGTAAAACTTCACATAGTAGAGGAGACCTTCCAAT 1018
Query 1019 GTTTCAGCTTTAGTGA-AAACGTGGATGTGGCGTTCCCACCAGTAAGTTTTGAGTTTGAG 1077
|||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1019 GTTTTAGCTTTAGT-ACAAACGTGGATGAGGCGTTCCCACCAGTAAGTTTTGAGTTTGAG 1077
Query 1078 GACTCTGTCAAACTAACCGTTTATCCGCATGATTATCTTTTCACACTTGAGAAAGAGTTG 1137
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1078 GACTCTGTCAAACTAACCGTTTATCCGCATGATTATCTTTTCACACTTGAGGAAGAGTTG 1137
Query 1138 TACTGCTTTGGTTGGCAAGCTGGTGGACTGACAACTGGTGAAAGAACAGAAGTGATTCTC 1197
||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||
Sbjct 1138 TACTGCTTTGGTTGGCAAGCTGGTGGACTGACAACAGATGAAAGATCAGAAGTCATTCTC 1197
Query 1198 TTAGGAGACTTGGTGCTCTCGAACAAGTTAGTAGTATACGATCTGGAAAACGAGGTGATC 1257
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1198 TTAGGAGATTTGGTGCTCTCGAACAAGTTAGTAGTATACGATCTGGATAACGAGGTGATC 1257
Query 1258 GGATGGGCAGATCACAACTGTTCATCAAGCATCAAAATAAAAGACGGATCGGGAGGAGTA 1317
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1258 GGATGGGCAGATCATAACTGTTCATCAAGCATCAAAATAAAAGACGGATCAGGAGGTGTT 1317
Query 1318 TACTCGGTCGGAGCAGACAACCTCTCATCAGCGCCTCCTTTGTTGATGATCACAAAGCTT 1377
||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||
Sbjct 1318 TACTCGGTCGGCGCAGACAATCTCTCATCGGCTCCTCGTTTGTTGATGATCACAAAGCTT 1377
Query 1378 CTTACAATTTTGTCACCATTGATCGCAGTGGCTTT-ACTTCATTAG 1422
||||||||||||||||||||||||| | ||||||| ||||| ||||
Sbjct 1378 CTTACAATTTTGTCACCATTGATCGTAATGGCTTTTACTTCCTTAG 1423
> AT5G36260.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr5:14284955-14288333 REVERSE LENGTH=1716
Length=1716
Score = 647 bits (350), Expect = 0.0
Identities = 1019/1329 (77%), Gaps = 97/1329 (7%)
Strand=Plus/Plus
Query 37 GTTTTCGTAATT-GTGAACGAATTTGCATCAGGCAATTTCGTGTTTAAGGT-ACAACACA 94
|||||||| || |||| | || ||| || || |||||||||||||| || || || |
Sbjct 203 GTTTTCGT-TTTGGTGATCCAAGTTGTTTCTGGGAATTTCGTGTTTAATGTGAC-GCATA 260
Query 95 AGTTCGCAGGGAAAGAG-AAGAA--GCTC-GAGCATTTCAAGTCTCATGACACGC-GCCG 149
||||||| || |||||| || || | || |||| |||| ||||| |||| || |||
Sbjct 261 AGTTCGCCGGAAAAGAGAAACAATTG-TCTGAGC---TCAAATCTCACGACA-GCTTCCG 315
Query 150 CCACTCTCGGATGCTCGCTTCCATTGATCTCCCTCTTGGCGGAGACAGCCGCGTAGACTC 209
||| |||| ||||| || || ||||| ||||| || || || || |||| |||||
Sbjct 316 TCACGCTCGTATGCTTGCGAATATCGATCTTCCTCTCGGTGGCGATAGTCGCGCCGACTC 375
Query 210 TGTCGGATTATACTTCACTAAAATCAAGCTCGGGTCGCCACCAAAGGAATATCATGTACA 269
|||| ||||||||||| ||||||||||| ||||| ||||||||||||||| |||| ||
Sbjct 376 CATCGGTTTATACTTCACCAAAATCAAGCTTGGGTCACCACCAAAGGAATATTATGTTCA 435
Query 270 AGTTGATACAGGAAGTGATATACTTTGGGTCAATTG--CAAGCCGTGTCCAGAA-TGTCC 326
|||||||||||||||||||||||||||||| ||||| || || ||||| || |||||
Sbjct 436 AGTTGATACAGGAAGTGATATACTTTGGGTTAATTGTGCA--CCATGTCCC-AAGTGTCC 492
Query 327 C-TCGAAAACTAATTT-GA-ATTTCCATTTATCGTTGT-TCGACG-TGAATGCTTCTTCG 381
| ||||||| || | | || || || ||| || | | ||| | || ||||||||
Sbjct 493 TGT-GAAAACTGATCTCGGTATA-CCGTT-ATCATTATAT-GACTCTAAAA-CTTCTTCG 547
Query 382 ACTTCAAAGAAGGTTGGTTGTGATGATGATTTTTGCTCTTTCATT-TCGCAATC-G-GA- 437
|| || ||||| ||||| ||||| |||||||| || || |||||| | |||||| | ||
Sbjct 548 ACATCGAAGAATGTTGGCTGTGAAGATGATTTCTGTTCGTTCATTAT-GCAATCCGAGAC 606
Query 438 TAGCTGC--CAACCCGCTGTTGGATGTAGTTATCACATTGTCTATGCG-GATGAGA-GTA 493
| | || ||| | | |||||||||||| | || |||| | |||| || |||
Sbjct 607 TTG-TGGGGCAAA--GAAGCC--ATGTAGTTATCATGTAGTGTATG-GAGATG-GAAGTA 659
Query 494 CAAGTGAAGGTA-ACTTTATAAGGGACAAG-TTAACTCTAGAACAAGTTACTGGAGATCT 551
||||||| || | | ||||||| ||| || ||| || |||||||||| |||||| ||||
Sbjct 660 CAAGTGATGG-AGATTTTATAAAGGATAACATTA-CTTTAGAACAAGTGACTGGAAATCT 717
Query 552 TCAAACTG-GACCACTTG-GTCAAGAAGTTGTATTCGGGTGTGGAAGTGATCAATCTGGA 609
|| ||| | | ||||||| | || |||||||||||||||||||||| |||| || ||
Sbjct 718 TCGAACCGCG-CCACTTGCG-CAGGAAGTTGTATTCGGGTGTGGAAAAAATCAGTCAGGG 775
Query 610 CAACTTGGG-AAGAGTGACTCAGCAGTTGATGGTGTTATGGGTTTTGGACAATCAAATAC 668
|| ||||| || | |||||||| ||||| ||| ||||||| || ||||||||||||||
Sbjct 776 CAGCTTGGACAA-ACCGACTCAGCGGTTGACGGTATTATGGGCTTCGGACAATCAAATAC 834
Query 669 CTCTGTTC-TTTCACAACTAGCTGCCACGGGCGA-TGCGAAA-AGAGTTTTTTCGCATTG 725
||| | || |||| |||||||||||| ||| || | | ||| ||| | ||||| |||||
Sbjct 835 CTC-GATCATTTCGCAACTAGCTGCCGGGGG-GAGTAC-AAAGAGAATATTTTCACATTG 891
Query 726 CTTGGATAATGTTAAAGGAGGTGGGATTTTTGCTGTTGGTGTTGTGGATTCTCCAAAAGT 785
||||||||| | || ||||||||||||||||||||||||| ||||| || ||| |||
Sbjct 892 TTTGGATAATATGAATGGAGGTGGGATTTTTGCTGTTGGTGAAGTGGAATCACCAGTAGT 951
Query 786 TAAAACAACCCCTATGGTACCTAATCAGATGCATTACAATGTAATGTTGATGGGAATGGA 845
|||||||| ||||| || ||||||||| | ||||||||||| || || | |||||||||
Sbjct 952 GAAAACAACTCCTATAGTTCCTAATCAGGTACATTACAATGTCATTTTAAAGGGAATGGA 1011
Query 846 TGTGGATGGAACTG-CCCT-T-GACCTTCCACCAAGT--A--T--TA-TGA-GGA-ACGG 893
||||||||| || |||| | ||||||||||||||| | | || | | || | ||
Sbjct 1012 TGTGGATGG---TGACCCTATTGACCTTCCACCAAGTCTAGCTAGTACTAACGGTGATGG 1068
Query 894 AGGAACCATTGTTGATAGTGGTACAACTTTGGCTTACTTTCCAAAGGTTCTT-TATGACT 952
|||||| || | ||||||||||||||||| || ||||| ||| || | || ||| |||
Sbjct 1069 AGGAACGATAATCGATAGTGGTACAACTTTAGCATACTTACCACAGAAT-TTGTATAACT 1127
Query 953 CCCTAATAGAAACGATT-CTTGCTCGTCAACCTGTAAAACTTCACATAGTAGAGGACACC 1011
| ||||| |||| |||| || ||| |||| || ||||| ||||| ||| |||| ||
Sbjct 1128 CACTAATCGAAAAGATTACT-GCTAAACAACAGGTGAAACTACACATGGTACAGGAAACT 1186
Query 1012 TT--CCAATGTTTCAGCTTT-AGTGAAAACGTGGATGTGGCGTTCCCACCAG-T-AAGTT 1066
|| || |||||||| ||| | | |||| ||| ||||| || | | | || |
Sbjct 1187 TTTGCC--TGTTTCAG-TTTCACTTCAAACACAGATAAAGCGTTTCC-CGTGGTCAA-TC 1241
Query 1067 TTGAGTTT-GAGGACTCTGTCAAACTAACCGTTTATCCGCATGATTATCTTTTCACACTT 1125
|| | ||| || ||||| | ||||| | || ||||||||||| ||||||||| |||||
Sbjct 1242 TTCA-TTTCGAAGACTCACTGAAACTGAGTGTGTATCCGCATGACTATCTTTTCTCACTT 1300
Query 1126 -GAGAAAGAGTTGTACTGCTTTGGTTGGCAAGCTGGTGGACTGACAACTG-GTGAAAGAA 1183
| ||| || |||| ||||||||||||||| |||||||| |||| ||| | || ||
Sbjct 1301 CGTGAA-GACATGTATTGCTTTGGTTGGCAATCTGGTGGAATGACGACTCAG-GACGGAG 1358
Query 1184 CAGAAGTGATTCTCTTAGGAGACTTGGTGCTCTCGAACAAGTTAGTAGTATACGATCTGG 1243
| || || || || || ||||| |||||||| || ||||||||||||||||||||| |||
Sbjct 1359 CTGATGTAATCCTTTTGGGAGATTTGGTGCTTTCAAACAAGTTAGTAGTATACGATTTGG 1418
Query 1244 AAAACGAGGTGATCGGATGGGCAGATCACAACTGTTCATCAAGCATCAAAATAAAAGACG 1303
| || ||||| || |||||||| || ||||||||||| |||||||||||| | ||||| |
Sbjct 1419 AGAATGAGGTCATTGGATGGGCTGACCACAACTGTTCGTCAAGCATCAAAGTCAAAGATG 1478
Query 1304 GATCGGGAG 1312
|||| ||||
Sbjct 1479 GATCAGGAG 1487
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70079960820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5