BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315769
Length=2364
Score E
Sequences producing significant alignments: (Bits) Value
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1... 3731 0.0
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1... 1768 0.0
> AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:25307658-25311308
FORWARD LENGTH=2755
Length=2755
Score = 3731 bits (2020), Expect = 0.0
Identities = 2254/2366 (95%), Gaps = 19/2366 (1%)
Strand=Plus/Plus
Query 1 ATGGATGTGACAGAGCTTGAGGAGAATCTATTCGCGGCTAGCGATGCTAAGTTACATGGA 60
||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 180 ATGGATGTGACCGAGCTTGAAGAGAATCTATTCGCGGCTAGCGATGCCAAGTTACATGGA 239
Query 61 GATATGTGCAAGGAACTATCTGGAGTTCTATGCAAGGTACTCTCAATCTTCCCGTCATTG 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 240 GATATGTGCAAGGAACTATCTGGAGTTCTATGCAAGGTACTTTCAATCTTCCCGTCATTG 299
Query 121 GAAGGAGCTAGACCGCGTAGTAAATCAGGGATTCAGGCCTTGTGCTCTTTACATATTGCA 180
|||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 300 GAAGGAGCAAGACCGCGTAGCAAATCAGGGATTCAAGCCTTATGCTCTTTACATATTGCA 359
Query 181 CTTGAGAAGGCAAAGAATATTCTTCAGCACTGTTCTGAATGTAGTAAACTTTACTTGGCC 240
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 360 CTTGAGAAGGCAAAAAATATTCTTCAGCACTGTTCTGAGTGTAGTAAACTTTACTTGGCC 419
Query 241 ATAACGGGGGATGCGGTTCTTTTAAAGTTTGAGAAAGCGAAAATTGCTCTCATCGACGGT 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 420 ATAACGGGGGATGCGGTTCTTTTAAAGTTTGAGAAAGCAAAAATTGCTCTCATTGATGGT 479
Query 301 CTTAAACGTGTAGAAGACATTGTTCCTAGTTCAATTGGGTCACAGATTTTGGAAATTGTT 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 480 CTTAAACGTGTAGAAGACATTGTTCCTAGCTCAATTGGGTCACAGATTTTGGAAATTGTT 539
Query 361 GGTGAACTAGAGAACACCAGGTTCATGCTTGATCCATCGGAGAAGGAAGTCGGTGATCAG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GGTGAACTAGAGAACACCAGGTTCATGCTTGATCCATCGGAGAAGGAAGTCGGTGATCAG 599
Query 421 ATCATTGCATTGCTCCAACAAGGGAAAAAATTTGACAACTGTAATGACAACACCGAGCTT 480
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 600 ATTATTGCATTGCTTCAACAAGGGAAGAAATTTGACAACTGTAATGACAACACCGAGCTT 659
Query 481 GAAATTTTCCACCGTGCAGCTACTAGACTCAGTATCACTTCTTCTAGAGTGGCTCTGGCG 540
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 660 GAAATTTTCCACCGTGCTGCTACTAGACTAAGTATCACTTCTTCTAGAGTGGCTCTGGCA 719
Query 541 GAACGAAGGGCTCTAAAGAAACTCATTGACAGGGCACGCGCTGAAGAAGACAAGCGTAAG 600
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 720 GAACGAAGGGCTTTAAAGAAACTCATTGACAGGGCACGCGCCGAAGAAGACAAGCGTAAG 779
Query 601 GAATCAATTGTGGCTTATCTTCTGCATCTTATGAGAAAATGCTCCAAGCTATTCAGAAGT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GAATCAATTGTGGCTTATCTTCTGCATCTTATGAGAAAATGCTCCAAGCTATTCAGAAGT 839
Query 661 GAGATTTTGGATGAGAATGACTCTCAGGGTTCATATCCATGTTCTCCTACCGTTCAGGGT 720
||||| ||||||||||||||||||| |||||| |||||||| | | || | |
Sbjct 840 GAGATCTTGGATGAGAATGACTCTCCGGGTTCCTATCCATG-T-T-CT--C---C----- 886
Query 721 TTTAATGAAGATCGTGGGAGTGTTCATGGGTTTGGCCGTCAGCTATCGAGGTTTGGTTCT 780
||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 887 --TAATGAAGATCATGGGAGTGTTCATGGGTTTGGTCGTCAGCTATCAAGGTTTGGTTCT 944
Query 781 TTAAACGACAAGCCCGTGAACAGCATAAATTCAGGACAGATGCCCGTTCCACCCGAAGAA 840
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 945 TTAAACGACAAGCCCATGAACAGCATAAATTCAGGACAGATGCCTGTTCCACCCGAAGAA 1004
Query 841 CTGAGATGCCCCATATCTTTGCAACTTATGTGTGATCCTGTCATTATTGCTTCAGGGCAG 900
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005 CTGAGATGTCCCATATCTTTGCAACTTATGTGTGATCCTGTCATTATTGCTTCAGGGCAG 1064
Query 901 ACTTATGAACGGGTCTGTATTGAGAAATGGTTCAGTGATGGGCATAATACCTGCCCAAAG 960
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1065 ACTTATGAACGGGTCTGTATTGAGAAATGGTTCAGTGATGGGCATAATACTTGCCCAAAG 1124
Query 961 ACTCAACAACAGCTCCCACATCTCTCTTTGACTCCCAATAACTGTGTTAAAGGTCTTATT 1020
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1125 ACTCAACAACAGCTCCCACATATCTCTTTGACTCCCAATAACTGTGTTAAAGGTCTTATT 1184
Query 1021 GCAAGCTGGTGTGAACAGAATGGAACTCAAATCCCTAGTGGGCCACCGGAATCTCAAGAC 1080
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1185 GCGAGCTGGTGTGAACAGAATGGAACTCAAATTCCTAGTGGGCCGCCGGAATCTCAAGAC 1244
Query 1081 CTCGACTACTGGAGACTAGCTCTCTCCGACTCTGAATCCACCAAATCACAGTCGGTCAAC 1140
|||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||
Sbjct 1245 CTCGACTACTGGAGACTAGCTCTCTCTGACTCCGAGTCCACCAAATCACAGTCAGTCAAC 1304
Query 1141 AGTATAGGGTCGTGTAAATTGAAGGGCATAAAAATTGTTCCGTTGGAGGAGAATGGTACT 1200
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1305 AGTATAGGGTCGTATAAATTGAAGGGCGTAAAAATTGTTCCGTTGGAGGAGAATGGTACT 1364
Query 1201 ACTGTTGTCGAACGACAAAACACAGAAGAAAGTTTTGTGTCtgatgatgatgatgatgaG 1260
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1365 ACTGTTGTTGAACGACAAAACACAGAAGAAAGTTTTGTGTCTGATGATGATGATGAGGAG 1424
Query 1261 GATTCTGATTTACATGTACTTCAGAGGTATCAAGATTTATTGGCTATCTTAAACGAAGAG 1320
||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1425 GATTCTGATATAAATGTACTTGAGAGGTATCAAGATTTATTGGCTGTCTTAAACGAAGAG 1484
Query 1321 GAGGATTTGGAGAAAAAAGGTAAGATTGTAGAAAAGATCAGGCTATTGCTGAAGGATGAT 1380
|||| ||||||||||||| | ||| |||||||||| ||||||||||||||||||||||||
Sbjct 1485 GAGGGTTTGGAGAAAAAATGCAAGGTTGTAGAAAAAATCAGGCTATTGCTGAAGGATGAT 1544
Query 1381 GAAGAGGCCAGGATCTTCATGGGAGCCAACGGGTTTGTCGAAGCCTTGTTACGGTTCTTA 1440
|||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 1545 GAAGAGGCCAGGATCTTCATGGGAGCCAACGGGTTTGTTGAAGCCTTGTTGCGATTCTTA 1604
Query 1441 GGATCAGCTGTGGATGAGAACAATGCGGCAGCTCAGGATAGTGGAGCTATGGCTCTGTTC 1500
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1605 GGATCAGCTGTAGATGATAACAATGCTGCAGCTCAGGATAGTGGAGCTATGGCTCTGTTC 1664
Query 1501 AATTTAGCCGTCAACAACAACAGGAACAAAGAGTTGATGTTAACTTCTGGGGTGATTCCG 1560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1665 AATTTAGCCGTCAACAACAACAGGAACAAAGAGTTGATGTTAACTTCTGGGGTGATTCGG 1724
Query 1561 TTGCTCGAGAAAATGATCTCTTCTTCTGAGTCCCAAGGTTCAGCAACCGCGCTTTATCTC 1620
|||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct 1725 CTGCTGGAGAAAATGATTTCTTCTGCTGAGTCCCATGGTTCAGCAACCGCGCTTTATCTG 1784
Query 1621 AATCTTTCCTGTCTCGATGAAGCAAAGTCCGTGATAGGTTCAAGCCAAGCAGTACCTTTC 1680
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1785 AACCTTTCCTGTCTCGATGAAGCAAAGTCCGTGATAGGTTCAAGCCAAGCAGTACCTTTC 1844
Query 1681 CTTGTCCAACTTCTTCAGAGGGAAATCGAAACCCAATGCAAGCTCGATGCTCTTCACGCC 1740
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1845 CTTGTCCAACTTCTTCAGAAGGAAATCGAAACCCAATGCAAGCTCGATGCTCTTCACGCC 1904
Query 1741 CTCTACAACCTTTCCACATATTCCCCCAATATCCCTGCTCTCCTTTCATCTAACATCATC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1905 CTCTACAACCTTTCCACATATTCCCCCAATATCCCTGCTCTCCTTTCATCTAACATCATC 1964
Query 1801 AAGAGCCTCCAAGGCCTTCTCACATCAACAGGTGAAAATTTGTGGACAGAGAAGTCATTA 1860
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||
Sbjct 1965 AAGAGCCTCCAAGGCCTTCTCGCATCAACAGGTGAAAATTTGTGGATAGAGAAGTCACTA 2024
Query 1861 GCCGTATTGCTAAATCTAGCTTCGAGCCAGGAAGGCAAAGATGAAGCGGTATCATCACAA 1920
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2025 GCCGTATTGCTAAATCTAGCTTCAAGCCAGGAGGGCAAAGATGAAGCGGTATCATCACAG 2084
Query 1921 GGCATGATCAGCAGTCTAGCAACAGTGCTAGACATGGGTGACACGACAGAGCAGGAGCAA 1980
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2085 GGCATGATCAGCAGTCTAGCAACAGTGCTAGACATGGGTGACACAACAGAGCAGGAGCAA 2144
Query 1981 GCTGTTTCATGCCTTTTGATTCTATGCAATGGAAGAGAGTCTTGTATCCAAATGGTGCTA 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2145 GCTGTTTCATGCCTTTTGATTCTATGCAATGGAAGAGAGTCTTGTATCCAAATGGTGCTA 2204
Query 2041 CAAGAAGGTGTGATACCATCATTAGTGTCAATCTCAGTGAACGGGACACCGCGAGGCAGA 2100
||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct 2205 CAAGAAGGTGTGATACCATCATTAGTGTCAATCTCTGTAAACGGAACACCTCGAGGCAGA 2264
Query 2101 GAGAAGTCTCAGAAGCTTCTAATGCTGTTTAGGGAACAACGGCAGCAACGGGATCAGCCA 2160
|||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||
Sbjct 2265 GAGAAGTCTCAGAAGCTTCTAATGCTGTTTAGGGAAGAAAGACAGCAACGGGACCAGCCA 2324
Query 2161 TCTCCAAACAGAGATGATCC-CCCACAAAAGGAACCT-CCCAGAAAATCTCTCTCAGCAC 2218
||| ||||||||||||| || ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 2325 TCTTCAAACAGAGATGAGCCACCC-CAAAAGGAACCTGCCC-GAAAATCTCTCTCAGCAC 2382
Query 2219 CGATGTCTGTCCATGGATCAAATCCAGCTTCAGCTCCAGTTCCAGACTATGAACCAAGAT 2278
|| |||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||||
Sbjct 2383 CGCTGTCTGTCCATGGATCAACTCCTGCTTCAGCTTCAGTTCAAGACTATGAACCAAGAG 2442
Query 2279 TCTTGTCGAAATCAATGTCGAGAAGAAAGTCGTTGGCAAGACCATTCAGCTTCTTCTGGA 2338
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2443 TCCTGTCGAAATCAATGTCGAGAAGAAAGTCGATGGCAAGACCATTCAGCTTCTTCTGGA 2502
Query 2339 AGAAAAGCTACTCGGTTCGCGAGTGA 2364
||||||||||||||||||||||||||
Sbjct 2503 AGAAAAGCTACTCGGTTCGCGAGTGA 2528
> AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:8631440-8635055
FORWARD LENGTH=2701
Length=2701
Score = 1768 bits (957), Expect = 0.0
Identities = 1807/2209 (82%), Gaps = 91/2209 (4%)
Strand=Plus/Plus
Query 1 ATGGATGTGA-CAGAGCTTGAGGAGAATCTATTCGCGGCTAGCGATGCTAAGTTACATGG 59
|||||||| | | ||||| ||||||||| | ||||| ||||||||||| |||||||||||
Sbjct 166 ATGGATGTTAGC-GAGCTCGAGGAGAATTTGTTCGCTGCTAGCGATGCCAAGTTACATGG 224
Query 60 AGATATGTGCAAGGAACTATCTGGAGTTCTAT-GCAAGGTACTCTCAATCTTCCCGTCAT 118
||||||||||||||||||||||| |||| ||| |||||||| | || |||||||| || |
Sbjct 225 AGATATGTGCAAGGAACTATCTGCAGTT-TATTGCAAGGTATTGTCCATCTTCCCTTCGT 283
Query 119 TGGAAGGAGCTAGACCGCGTAGTAAATCAGGGATTCAGGCCTTGTGCTCTTTACATATTG 178
|||||| ||| ||||| || ||||||||||||||||| ||||||| || ||||||||||
Sbjct 284 TGGAAGAAGCAAGACCTCGGAGTAAATCAGGGATTCAAACCTTGTGTTCGTTACATATTG 343
Query 179 CACTTGAGAAGGCAAAGAATATTCTTCAGCACTGTTCTGAATGTAGTAAACTTTACTTGG 238
||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||
Sbjct 344 CACTTGAGAAGGCAAAGAACATTCTTCAACACTGTTCTGAGTGTAGCAAACTTTATTTGG 403
Query 239 CCATAACGGGGGATGCGGTTCTTTTAAAGTTTGAGAAAGCGAAAAT-TGCTCTCATCGAC 297
|||| || |||||||| || || ||||| ||||||||||| ||||| ||| || |||||
Sbjct 404 CCATTACTGGGGATGCTGTACTGTTAAAATTTGAGAAAGC-AAAATCTGCACTTATCGAT 462
Query 298 GGTCTTAAACGTGTAGAAGACATTGTTCCTAGTTCAATTGGGTCACAGATTTTGGAAATT 357
|||||| |||||| || |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 463 AGTCTTAGACGTGTGGAGGACATTGTTCCTAGTTCAATTGGGTCTCAGATTTTGGACATT 522
Query 358 GTTGGTGAACTAGAGAACACCAGGTTCATGCTTGATCCATCGGAGAAGGAAGTCGGTGAT 417
||||||||||||||| |||||| |||| | ||||||||||| ||||||||||| ||||||
Sbjct 523 GTTGGTGAACTAGAGCACACCAAGTTCCTACTTGATCCATCAGAGAAGGAAGTTGGTGAT 582
Query 418 CAG-ATCATTGCATTGCTCCAACAAGGGAAAAAATTTGACAACTGTAATGACAACACCGA 476
|| || |||||| | | ||||||||||| |||||||||||| | | ||||| |||||
Sbjct 583 -AGGATAATTGCACTATTACAACAAGGGAAGAAATTTGACAACGGCAGTGACAGTACCGA 641
Query 477 GCTTGAAATTTTCCACC-GTGCAGCTACTAGACTCAGTATCACTTCTTCTAGAGTG-GCT 534
||||||||||| |||| | |||||||||||||||||||| |||||||||||| | |||
Sbjct 642 ACTTGAAATTTTTCACCAG-GCAGCTACTAGACTCAGTATAACTTCTTCTAGA-TCAGCT 699
Query 535 CTGGCGGAACGAAGGGCTCTAAAGAAACTCATTGACAGGGCACGCGCTG-AAGAAGACAA 593
|||||||| || | ||| |||||||| |||||||||||||||| | || ||||||||||
Sbjct 700 CTGGCGGAGCGGCGTGCTTTAAAGAAAGTCATTGACAGGGCACGTG-TGGAAGAAGACAA 758
Query 594 GCGTAAGGAATCAATTGTGGCTTATCT-TCTGCATCTTATGAGAAAATGCTCCAAGCTAT 652
||| ||||| ||||||||||||||||| | ||||||| |||||||||| |||||||||||
Sbjct 759 GCGGAAGGAGTCAATTGTGGCTTATCTGT-TGCATCTCATGAGAAAATACTCCAAGCTAT 817
Query 653 TCAGAAGTGAGATTTTGGATGAGAATGACTCTCAGGGTTCAT-ATCCATGTTCTCCTACC 711
| ||||||||||| |||||||||||||||||| ||||| | || ||||| |||||
Sbjct 818 TTAGAAGTGAGATGATGGATGAGAATGACTCTCCTTGTTCAACA-CCGTGTTCCCCTACT 876
Query 712 GTTCAGGGTTTTAATGAAGATCGTGGGAGTGTTCATGGGTTTGGCCGTCAGCTATCGAGG 771
| ||| ||| ||| |||||||||| | | ||| |||||| || || ||||| | |
Sbjct 877 GGTCAAGGTCCTAACGAAGATCGTG----T-TA-ATGCGTTTGGGCGACAACTATCCAAG 930
Query 772 TTTGGTTCT-TTAAACGACAAGCCCGTGAACAGCAT-AAATTCAGGACAGATGCCCGTTC 829
||||||||| |||| | | ||||| ||||||| | |||| ||||||||||||| |||
Sbjct 931 TTTGGTTCTATTAA-CTATAAGCCTATGAACAGTAGGAAAT-CAGGACAGATGCCTATTC 988
Query 830 CACCCGAAGAACTGAGATGCCCCATATCTTTGCAACTTATGTGTGATCCTGTCATTATTG 889
|||| |||||||| || || |||||||||||||| ||||||| |||||||||||| ||||
Sbjct 989 CACCAGAAGAACTTAGGTGTCCCATATCTTTGCAGCTTATGTATGATCCTGTCATCATTG 1048
Query 890 CTTCAGGGCAGACTTATGAACGGGTCTGTATTGAGAAATGGTTCAGTGATGGGCATAA-T 948
|||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 1049 CTTCTGGACAGACTTATGAACGGGTCTGTATTGAGAAATGGTTTAGTGATGGACATAACT 1108
Query 949 ACCTG-CCCAAAGACTCAACAACAGCTCCCACATCTCTCTTTGACTCCCAATAACTGTGT 1007
| || ||||| |||||| || || ||||||||||| || ||||||||||| |||||||
Sbjct 1109 -CTTGTCCCAA-GACTCAGCAGCAACTCCCACATCTTTCCCTGACTCCCAATTACTGTGT 1166
Query 1008 TAAAGGTCTT-ATTGCAAGCTGGTGTGAACAGAATGGAACTCAAA-TCCCTAGTGGGCCA 1065
||||||| || ||||| |||||||||||||||||||||| ||| | |||||| ||| |||
Sbjct 1167 TAAAGGT-TTGATTGCGAGCTGGTGTGAACAGAATGGAA-TCACAGTCCCTACTGGACCA 1224
Query 1066 CCGGAATCTCAAGACCTCGACTACTGGAGACTAGCTC-TCTCCGACTCTGAATCCACCAA 1124
|| ||||||| |||||| | ||||||||| |||| | | || |||||||||||| ||||
Sbjct 1225 CCAGAATCTCTTGACCTCAATTACTGGAGATTAGC-CATGTCTGACTCTGAATCCCCCAA 1283
Query 1125 ATCACAGTCGGTCAACAGTATAGGGTCGTGTAAATTGAAGGGCATAAAAATTGTTCCGTT 1184
||| |||| || | ||| |||| | ||| | | ||||| || | | | ||||| ||
Sbjct 1284 TTCAAAGTCAGTTGATAGTGTAGGATTGTGCACACCGAAGGATATCAGAGTCGTTCCTTT 1343
Query 1185 GGAGGAGAATGGTACTACTGT-TGTCGAACGACAA-AACACAGAAGAAAGTTTTGTGTCt 1242
|||||||| | |||||| || | | ||||||||| || | |||| ||| || ||
Sbjct 1344 GGAGGAGAGTAGTACTATTGAATCT-GAACGACAACAAAA-AGAAAAAAACAATGC-TCC 1400
Query 1243 gatgatgatgatgatgaGGATTCTGATTTACA-TGTACTTCAGAGGTATCAAGATTTATT 1301
|||||| | | || | ||||||| | || ||| || || ||||||| ||| ||||
Sbjct 1401 --TGATGA-G--G-TG-G-ATTCTGAAAT-CAATGTTCTAGAGGGGTATCAGGATATATT 1451
Query 1302 GGCTATCTTAAACGAAGAGGAGGATTTGGAGAAAAAAG-GTAAGATT-GTAGAAAA-GAT 1358
||| ||| | || |||||||||| || | ||||| | | || | | |||||||| | |
Sbjct 1452 GGCAATCGTGGACAAAGAGGAGGACTTAGCTAAAAA-GTGCAA-AGTAGTAGAAAATG-T 1508
Query 1359 CAGGCTATTGCTGAAGGATGATGAAGAGGCCAGGATCTTCATGGGAGCCAACGGGTTTGT 1418
|||| ||||||| |||||| ||||||||||||||||| ||||||||||||| ||||| ||
Sbjct 1509 CAGGATATTGCTAAAGGATAATGAAGAGGCCAGGATCCTCATGGGAGCCAATGGGTTCGT 1568
Query 1419 CGAAGCCTTGTTACGGTT-CTTAGGATCAGCTGTGGATGAGAACAATGCGGCAGCTCAGG 1477
||||| || || | ||| || || ||||||||| |||| |||||||| || || ||||
Sbjct 1569 GGAAGCGTTTTTGCAGTTTCT-AGAATCAGCTGTTCATGATAACAATGCAGCCGCACAGG 1627
Query 1478 ATAGTGGAGCTATGGCTCTGTTCAATTTAGCCGTCAACAACAACAGGAACAAAGAGTTGA 1537
| | |||||||||||||| || || ||||| |||||||| ||||||||||||||| |||
Sbjct 1628 AAACCGGAGCTATGGCTCTATTTAACTTAGCAGTCAACAATAACAGGAACAAAGAGCTGA 1687
Query 1538 TGTTAACTTCTGGGGTGATTCCGTTGCTCGAGAAAATGATCTCTTCTTCTGAGTCCCAAG 1597
|| | ||||| ||||| || || |||| ||||||||||| |||| ||| | |||||||
Sbjct 1688 TGCTGACTTCAGGGGTCATCCCACTGCTAGAGAAAATGATTTCTTGTTCCCAATCCCAAG 1747
Query 1598 GTTCAGCAACCGCGCTT-TATCTCAATCTTTCCTGTCTCGATGAA-GCAAAGTCCGTGAT 1655
| ||||||| ||| || ||||| || || || || ||||| ||| || ||| |||||||
Sbjct 1748 GGCCAGCAACTGCG-TTATATCTAAACCTCTCTTGCCTCGA-GAAAGCCAAGCCCGTGAT 1805
Query 1656 AGGTTCAAGCCAAGCAGTA-CCTTTCCTT-GTCCAA-CTTCTTCAG-AGGGAAATCGAAA 1711
|| ||||| |||||||| ||||| || || || ||||||| ||| | | |||||
Sbjct 1806 TGGCTCAAGTCAAGCAGTTTCCTTT--TTCGTG-AATCTTCTTCTTCAGG-ATA-CGAAA 1860
Query 1712 -CCCAATGCAAGCTCGATGCTCTTCACGCCCTCTACAACCTTTCCACATATTCCCCCAAT 1770
||||||||||||| || || |||||||||||||||||||| ||||| || || ||||||
Sbjct 1861 ACCCAATGCAAGCTGGACGCCCTTCACGCCCTCTACAACCTCTCCACCTACTCTCCCAAT 1920
Query 1771 AT-CCCTGCTCTCCTTTCATCTAACATCATCAAGAGCCTCCAAGGCCTTCTCACATCAAC 1829
|| ||| ||||||||||||| ||||| ||||| |||||||||| |||| || |||||
Sbjct 1921 ATTCCCA-CTCTCCTTTCATCAAACATAATCAAAAGCCTCCAAGTCCTTG-CA--TCAAC 1976
Query 1830 AGGTGAAA-ATTTGTGGACAGAGAAGTCATTAGCCGTATTGCTAAATCTAGCTTCGAGCC 1888
|||| || | ||||||| ||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1977 AGGT-AACCACTTGTGGATAGAGAAGTCATTAGCCGTATTACTAAATCTAGCCTCTAGCC 2035
Query 1889 AGGAAGGCAAAGATGAAGCGG-TATCATCACAAGGCATGATCAGCAGTCTAGCAACAGTG 1947
|||||| ||||| || | | || || ||||||| |||||||| | || ||||| |||
Sbjct 2036 GGGAAGGAAAAGAAGA-GATGATAACAACACAAGGAATGATCAGTACACTTGCAACGGTG 2094
Query 1948 CTAGACATGGGTGACAC-GACAGAGCAGGAGCAAGCTGTTTCATGCCTTTTGATTCTATG 2006
|||||| |||||||| | | || || |||||||| ||||| ||||| |||| |||||
Sbjct 2095 TTAGACACCGGTGACACAGTC-GAACAAGAGCAAGCAGTTTCTTGCCTAGTGATCCTATG 2153
Query 2007 CAATGGAAGAGAGTCTTGTATCCAAATGGTGCTACAAGAAGGTGTGATACCATCAT-TAG 2065
| ||||| ||||| |||||||| ||||||||||||||||| ||||| || || | | |
Sbjct 2154 TACGGGAAGCGAGTCGTGTATCCAGATGGTGCTACAAGAAGGAGTGATTCCGTC-TCTGG 2212
Query 2066 TGTCAATCTCAGTGAACGGGACACCGCGAGGCAGAGAGAAGTCTCAGAAGCTTCTAATGC 2125
|||| |||||||||||||| | || ||||| ||||| ||||||||||||||||| ||||
Sbjct 2213 TGTCGATCTCAGTGAACGGAAGTCCCCGAGGAAGAGACAAGTCTCAGAAGCTTCTGATGC 2272
Query 2126 TGTTTAGGGAACAACGGCAGCAACGGGATCAGCCATCTCCAAACAGAGA 2174
|||| ||||||||| |||| | | ||||||||||| ||||||| |||
Sbjct 2273 TGTTCAGGGAACAAAGGCAT-A--GAGATCAGCCATCACCAAACAAAGA 2318
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117368874210
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5