BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315881 Length=414 Score E Sequences producing significant alignments: (Bits) Value AT1G68630.1 | Symbols: | PLAC8 family protein | chr1:25768539-... 459 1e-128 > AT1G68630.1 | Symbols: | PLAC8 family protein | chr1:25768539-25770260 FORWARD LENGTH=1402 Length=1402 Score = 459 bits (248), Expect = 1e-128 Identities = 274/287 (95%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 128 CTTGTATGAACGCTGGTTTGATTCATCTAGCGTTAGGCTTTGTGGGTTGCAGCTGGCTCT 187 ||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct 314 CTTGTATGAACGCAGGTTTGATTCATCTAGCGTTAGGCTTTATTGGTTGTAGCTGGCTCT 373 Query 188 ACGCTTTTCCAAGTCGGTCTAGGCTTAGGGAACATTTCGCATTGCCTGAGGAACCATGCC 247 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 374 ACGCTTTTCCAAACCGGTCTAGGCTTAGGGAACATTTCGCATTGCCTGAAGAACCATGCC 433 Query 248 GTGACTTTTTAGTCCATCTCTTTTGCACCCCATGTGCTATATGCCAAGAGTCCCGGGAAC 307 |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct 434 GTGACTTTTTAGTCCATCTCTTTTGCACCCCATGCGCTATCTGCCAAGAGTCCCGAGAAC 493 Query 308 TCAAGAACCGCGGCGCTGACCCTTCTATCGGATGGCTTTCGAATGTAGAGAAATGGAGCC 367 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 494 TCAAGAACCGCGGCGCTGATCCTTCTATCGGATGGCTTTCGAATGTAGAGAAATGGAGCC 553 Query 368 GAGAGAAAGTAACACCTCCCATAGTTGTACCTGGCATGATTCGGTGA 414 | ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 554 GTGAGAAAGTAACACCTCCCATAGTTGTACCTGGCATGATTCGATGA 600 Score = 207 bits (112), Expect = 5e-53 Identities = 122/127 (96%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1 ATGTACGGGAATGGGCCGGTGTTCAAGGCGGAGGGGACGTCGTTCCGGGATCAACCATAC 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 115 ATGTACGGGAATGGGCCGGTGTTTAAGGCGGAGGGGACGTCGTTCCGGGATCAACCATAC 174 Query 61 GCCGAACAGCTTCCTCAGGGACTATGGACCACCGGTCTTTGTGATTGTCACGAAGATGCT 120 || ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct 175 GCGGAACAGCTTCCTCAGGGACTATGGACCACAGGGCTTTGCGATTGTCACGAAGATGCT 234 Query 121 CACATTT 127 ||||||| Sbjct 235 CACATTT 241 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19604422110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5