BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg315925

Length=654
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G68940.3 | Symbols:  | Armadillo/beta-catenin-like repeat fa...   119    4e-26


> AT1G68940.3 | Symbols:  | Armadillo/beta-catenin-like repeat 
family protein | chr1:25921453-25925845 REVERSE LENGTH=3525
Length=3525

 Score =  119 bits (64),  Expect = 4e-26
 Identities = 90/103 (87%), Gaps = 0/103 (0%)
 Strand=Plus/Plus

Query  546   TTGGTCTGCCGAGGTTTCCTTGGAGAGACGCGAGGGATGCAAAATTCGGGGGAAGATTGA  605
             ||||| ||| ||| ||||| |||||||| |||| ||| || | ||| |||||||||||| 
Sbjct  3381  TTGGTGTGCTGAGATTTCCGTGGAGAGAGGCGATGGAGGCGAGATTTGGGGGAAGATTGT  3440

Query  606   GTGGTCCAGTGCTATCTACAAACTTGATCCTCTCTCACACTCA  648
             ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct  3441  GTGGTCCGGTGCTGTCTACAAACTTGATCCTCTCTCACACTCA  3483



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 31597278463


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5