BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg315955
Length=2262
Score E
Sequences producing significant alignments: (Bits) Value
AT1G69526.2 | Symbols: | S-adenosyl-L-methionine-dependent met... 922 0.0
AT1G69520.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 832 0.0
AT1G69523.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 800 0.0
> AT1G69526.2 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr1:26131294-26133196
FORWARD LENGTH=1385
Length=1385
Score = 922 bits (499), Expect = 0.0
Identities = 573/609 (94%), Gaps = 4/609 (1%)
Strand=Plus/Plus
Query 1366 CTCACATACTCACCTCGCAGAGTGATTAGAGCTTCACGAGATCAACTTCATGCTCAAACT 1425
|||| |||||||||||||||||||||| |||||||||||||||| |||| |||| |||||
Sbjct 254 CTCAAATACTCACCTCGCAGAGTGATTCGAGCTTCACGAGATCATCTTCGTGCTGAAACT 313
Query 1426 GTAAAGAGTCATCACCTTCCTTCAGGCTCATCCTACACCAGCTTATGTTCATGTGGAAGA 1485
||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct 314 CTAAAGAGTCATCAACTTCCTTCAGGCTCCTCCTCCACCAGCTTATGTTCCTGTGGAAGA 373
Query 1486 AAACATTTTCTTGAAGCAGCTAGCCCGACGATGCCCTTTCTTTCC-ATCTATTCTCCTAA 1544
||||||||||| |||||||||||||||||||||||||||| |||| || | ||| |||||
Sbjct 374 AAACATTTTCTCGAAGCAGCTAGCCCGACGATGCCCTTTC-TTCCTATTTGTTCACCTAA 432
Query 1545 TGCTTCGCGTTCCAAGGATGTTTCAGAAACATTTCATCCTCAGAAGCCAGATTGGTATAA 1604
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 433 TGCTTCGCGTTCCAAGGATGTTTCAGAAACATTTCATCCTCAGAGGCCAGATTGGTATAA 492
Query 1605 GGAGCTTTTTGCTTGGTTCTTAAGCACAGGAATGCGATCTTATGAAGCAGAGATCGCCGA 1664
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 493 GGAGCTTTTTGCTTGGTTCTTGAGCACAGGAATGCGATCTTATGAAGCAGAGATCGCCGA 552
Query 1665 TTACAAGAGAAAACTATTCGAAAAATTGGCTGGTAAAGCAGAAACAGTGCTGGAGATTGG 1724
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 553 GTACAAGAGGAAACTATTCGAAAAACTGGCTGGTAAAGCAGAAACAGTGCTGGAGATTGG 612
Query 1725 TGTTGGTACAGGTCTTAATCTGAAGTACTTTGCCGGTAACGAAAACGTCTGTGTTTTTGG 1784
||||||||| || | |||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 613 TGTTGGTACTGGCCCTAATCTGAAGTACTTTGCTGGTAATGAAAACGTCTGTGTTTTTGG 672
Query 1785 TATGGACCCGAATCACAAAATGGAAAAGTACGCATGTG-ATACTGCTAGAGAAGCTGGGA 1843
|||||||||||| || |||||||||||||||||||||| || |||| |||||||||||||
Sbjct 673 TATGGACCCGAACCATAAAATGGAAAAGTACGCATGTGAAT-CTGCCAGAGAAGCTGGGA 731
Query 1844 TGAAACCTGAAAACTTTAGATTCATTCAAGGAGTAGGAGAAGCTATACCATTAGATGATG 1903
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 732 TGAAACCTGAAAACTTTAGATTCATGCATGGAGTAGGAGAAGCTATACCATTAGATGATG 791
Query 1904 ACTCTGTGGATGCAGTGGTTGCAACACTTGTTCTATGTTCTGTCTCTGATGTCACTCAAA 1963
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 ACTCTATGGATTCAGTGGTTGCAACACTTGTTCTATGTTCTGTCTCTGATGTCACTCAAA 851
Query 1964 CACTCAATG 1972
|||| ||||
Sbjct 852 CACTAAATG 860
Score = 316 bits (171), Expect = 5e-85
Identities = 191/201 (95%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 2062 GATGGATCtttttttAGGCATGTTCAGAATATATTGGATCCATTACAGCAAGTAGTTGCA 2121
|||||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||
Sbjct 923 GATGGATCTTTTTTTAGGCATGTTCAAAATGTACTGGATCCAATACAGCAAGTAGTTGCA 982
Query 2122 GATGGATGCCATTTAACAAGAAACACCGACTTATACATTTCCGCTGCGGGTTTCGATGGT 2181
|||||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 983 GATGGATGTCATTTGACAAGAAACACCGACTTACACATTTCGGCTGCGGGTTTCGATGGT 1042
Query 2182 GGCACTGAGATCAACAATACGGCAATCTATAGCTTCCCTTGGATTATAAGACCTCATGTC 2241
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043 GGCACTGAGATCAACGATACGGCAATCTATAGCTTCCCTTGGATTATAAGACCTCATGTC 1102
Query 2242 TATGGAGCAGCCTACAAGTAA 2262
||||||||||| |||||||||
Sbjct 1103 TATGGAGCAGCATACAAGTAA 1123
Score = 300 bits (162), Expect = 5e-80
Identities = 351/438 (80%), Gaps = 29/438 (7%)
Strand=Plus/Plus
Query 193 AAAGCTGAAA-AGGTTTTGGAGATTGGTATTGGCT-CAGGTCCTAATATGAGGTACTATG 250
||||| |||| | || ||||||||||| |||| | | || |||||| ||| ||||| |
Sbjct 587 AAAGCAGAAACA-GTGCTGGAGATTGGTGTTGG-TACTGGCCCTAATCTGAAGTACT-T- 642
Query 251 CTGCTCGTAATAG-TAATGTTACTCT-TTATGGGT-TGGATCCAAATCC-CAAAAT-GAA 305
|||| ||||| | || | | || | || | ||| |||| || || || ||||| |||
Sbjct 643 -TGCTGGTAAT-GAAAACG-T-CTGTGTTTTTGGTATGGACCCGAA-CCATAAAATGGAA 697
Query 306 GAAGTACGCACGCAAATCCGCTACGA-AAGC-AGGATTGAAACCTAAAAACTTTAGATTC 363
||||||||| | |||| || | || |||| ||| |||||||| ||||||||||||||
Sbjct 698 -AAGTACGCATGTGAATCTGCCA-GAGAAGCTGGGA-TGAAACCTGAAAACTTTAGATTC 754
Query 364 AAGCAAGGAGTAGGAGAAGCTATACCATTAAAAGATAACTCTGTGGATGCAGTTGTTGCA 423
| ||| |||||||||||||||||||||||| | ||| ||||| ||||| |||| ||||||
Sbjct 755 ATGCATGGAGTAGGAGAAGCTATACCATTAGATGATGACTCTATGGATTCAGTGGTTGCA 814
Query 424 ACACTTGTTCTATGTTCTGTCTCTGATGTCACTCAAACACTCAAA-GAAATCAAACGGGT 482
||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||||
Sbjct 815 ACACTTGTTCTATGTTCTGTCTCTGATGTCACTCAAACACT-AAATGAGATCAAGCGGGT 873
Query 483 GCTGAGACCAGGAGGGGTTTTCATCTTCTTAGAACATGTTGCAGCAAAAGATGGATCGTT 542
||||| ||| || ||| ||||| | ||| | || || || || || ||||||||||| ||
Sbjct 874 GCTGAAACCGGGTGGGATTTTCTTATTCATCGAGCACGTAGCGGCTAAAGATGGATCTTT 933
Query 543 CTTCAAGCGT-TTGCAGAAAT-TGCTGGATCCGTTGCAGCAAAG-ACTTGCAGATGGATG 599
|| | || | || || |||| | |||||||| | |||||| | | |||||||||||||
Sbjct 934 TTTTAGGCATGTT-CA-AAATGTACTGGATCCAATACAGCAA-GTAGTTGCAGATGGATG 990
Query 600 CCATTTGACAAGAAACAC 617
|||||||||||||||||
Sbjct 991 TCATTTGACAAGAAACAC 1008
> AT1G69520.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr1:26128288-26129602
FORWARD LENGTH=794
Length=794
Score = 832 bits (450), Expect = 0.0
Identities = 505/531 (95%), Gaps = 5/531 (1%)
Strand=Plus/Plus
Query 148 GAGATTGAGGCTTGCAAGGTGAAGGTATTTGATAAACTAAGTGAAAAAGCTGAAAAGGTT 207
|||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 210 GAGATTGAGGATTGCAAGGTGAAGATATTTGATAAACTGAGTGAAAAAGCTGAAAAGGTT 269
Query 208 TTGGAGATTGGTATTGGCTCAGGTCCTAATATGAGGTACTATGCTGCTCGTAATAGTAAT 267
|||||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||
Sbjct 270 TTGGAGATTGGTATTGGCACAGGTCCTAATATGAGATACTACGCTGCTCGCAATAGTAAC 329
Query 268 GTTACTCTTTATGGGTTGGATCCAAATCCCAAAATGAAGAAGTACGCACGCAAATCCGCT 327
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 330 GTTACTCTATATGGGTTGGATCCAAATCCCAAAATGAAGAAATACGCACGCAAATCCGCT 389
Query 328 ACGAAAGCAGGATTGAAACCTAAAAACTTTAGATTCAAGCAAGGAGTAGGAGAAGCTATA 387
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 390 ACCAAAGCAGGATTGAAACCTAAAAACTTTAGATTCAAGCAAGGAGTAGGAGAAGCTATA 449
Query 388 CCATTAAAAGATAACTCTGTGGATGCAGTTGTTGCAACACTTGTTCTATGTTCTGTCTCT 447
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 450 CCATTAAAAGATAACTCTGTGGATGCAGTTGTTGCAACACTGGTTCTATGTTCTGTCTCT 509
Query 448 GATGTCACTCAAACACTCAAAGAAATCAAACGGGTGCTGAGACCAGGAGGGGTTTTCATC 507
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 510 GATGTCACTCAAACACTCAAAGAAATCAAACGTGTGCTGAGACAAGGAGGGGTTTTCATC 569
Query 508 TTCTTAGAACATGTTGCAGCAAAAGATGGATCGTTCTTCAAGCGTTTGCAGAAATTGCTG 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 570 TTCTTAGAACATGTTGCAGCAAAAGATGGATCGTTCTTCAAGCGTTTGCAGAAATTGTTA 629
Query 568 GATCCGTTGCAGCAAAGACTTGCAGATGGATGCCATTTGACAAGAAACACGAGAGAGTGT 627
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 630 GATCCGTTGCAGCAGAGACTTGCAGATGGATGCCATTTGGCAAGAAACACGAGAGAGTGC 689
Query 628 ATCTTGGAAGCTGGTTTTATTGGAG---TTGAAGTAGAGAC-TTATTCTAT 674
||||||||||||||||||| ||||| |||||||| |||| || ||||||
Sbjct 690 ATCTTGGAAGCTGGTTTTAGTGGAGGAGTTGAAGTACAGACCTT-TTCTAT 739
Score = 200 bits (108), Expect = 5e-50
Identities = 228/283 (81%), Gaps = 19/283 (7%)
Strand=Plus/Plus
Query 1699 AAAGCAGAAACA-GTGCTGGAGATTGGTGTTGGTACAGGTCTTAATCTGAAG-TACTTTG 1756
||||| |||| | || ||||||||||| |||| ||||||| |||| || || |||| |
Sbjct 255 AAAGCTGAAA-AGGTTTTGGAGATTGGTATTGGCACAGGTCCTAATATG-AGATACTACG 312
Query 1757 CCGGTAACGA-A--AACG-T-CTGTGTTTTTGGTATGGACCCGAATCACAAAATGGAA-A 1810
| | | | | | |||| | || | | | ||| |||| || |||| |||||| ||| |
Sbjct 313 CTGCTCGCAATAGTAACGTTACTCT-ATATGGGT-TGGATCCAAATCCCAAAAT-GAAGA 369
Query 1811 AGTACGCATGTGATA-CTGCTA-GAGAAGCTGGGA-TGAAACCTGAAAACTTTAGATTCA 1867
| |||||| | | | | |||| | |||| ||| |||||||| |||||||||||||||
Sbjct 370 AATACGCACG-CAAATCCGCTACCA-AAGC-AGGATTGAAACCTAAAAACTTTAGATTCA 426
Query 1868 TTCAAGGAGTAGGAGAAGCTATACCATTAGATGATGACTCTGTGGATGCAGTGGTTGCAA 1927
||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||||
Sbjct 427 AGCAAGGAGTAGGAGAAGCTATACCATTAAAAGATAACTCTGTGGATGCAGTTGTTGCAA 486
Query 1928 CACTTGTTCTATGTTCTGTCTCTGATGTCACTCAAACACTCAA 1970
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct 487 CACTGGTTCTATGTTCTGTCTCTGATGTCACTCAAACACTCAA 529
Score = 113 bits (61), Expect = 6e-24
Identities = 73/79 (92%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 70 CAATGCTCAGTGTTCGAAGGATGTTCCGGGAGCACATCATCCGCAGAGGCCGGTGGTATA 129
|||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||| ||
Sbjct 97 CAATGCTCGGTGTTCAAAGGATTTTCCAGGAGCACATCATCCGCAGAGGCCGGTGGTGTA 156
Query 130 TTAGGAGGCTCTACTCGTG 148
|||||||| ||||||||||
Sbjct 157 TTAGGAGGGTCTACTCGTG 175
Score = 110 bits (59), Expect = 8e-23
Identities = 66/69 (96%), Gaps = 2/69 (3%)
Strand=Plus/Plus
Query 1 ATGTATGATCTAAGACCCAGAACACTCACCTTCCTTGAGGTTGCTATTCCTCC-ACCTAC 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 1 ATGTATGATCTAAGACCCAGAACACTCACCTTCCTTGAGGTTGCTCTTCCTCCCAC-TAC 59
Query 60 TGATACTAC 68
|||||||||
Sbjct 60 TGATACTAC 68
> AT1G69523.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr1:26129551-26131292
FORWARD LENGTH=1314
Length=1314
Score = 800 bits (433), Expect = 0.0
Identities = 499/531 (94%), Gaps = 4/531 (1%)
Strand=Plus/Plus
Query 821 TTTCAGATTACAAGATGAAACTCTTTGATAATTTAGTTGGGAAAGCAGAAAAAGTTTTGG 880
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 605 TTTCAGATTACAAGATGAAACTCTTTGATAACTTAGTTGGGAAAGCAGAAAAAGTTTTGG 664
Query 881 AGATTGGCATTGGAACAGGTCCTAATTTCAAGTACTACACAG-CTATTCCAAACCTTTCT 939
|||||||||||||||||||||| || |||||||||||||||| | ||||||||| |||||
Sbjct 665 AGATTGGCATTGGAACAGGTCCCAACTTCAAGTACTACACAGAC-ATTCCAAACGTTTCT 723
Query 940 GTTATTGGTATTGATCCAAATGCTAGGATGGAAAGTTATGCGTGCAAATCCGCTGCAGAA 999
||||||||||||||||||||||||| ||||||||||||||| | ||||||||| |||||
Sbjct 724 GTTATTGGTATTGATCCAAATGCTAAAATGGAAAGTTATGCGCGTAAATCCGCTACAGAA 783
Query 1000 GCAGGCTTGAAACCCGAAGATTTCACATTCATTCATGCGCTTGGAGAGTCTATACCGTTA 1059
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 784 GCAGGCTTGAAACCTGAAGAATTCACATTCGTTCATGCGCTTGGAGAGTCTATACCGTTA 843
Query 1060 GAAGATGCATCAGTTGATGCAGTCGTGGGAACTCTCGTGCTTTGTTCTGTAACGGATGTC 1119
||||||||||| ||||||||||||||||| ||||| |||||||||||||| || ||||||
Sbjct 844 GAAGATGCATCGGTTGATGCAGTCGTGGGGACTCTGGTGCTTTGTTCTGTCACAGATGTC 903
Query 1120 ACTCGGACGCTCAACGAGATAAAACGGGTACTAAGACCGGGAGGTATATACATTTTCATA 1179
|||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 904 ACTCAGACGCTCAAAGAGATAAAACGGATACTAAGACCGGGAGGGATATACATTTTCATT 963
Query 1180 GAACATGTTGCAGCGGAAGATGGTACATTTCTGAGGTTGGTGCAGA-ATGTGTTGGACCC 1238
|||||||||||||| ||||||||||||||| ||||||||||||||| | || ||||||||
Sbjct 964 GAACATGTTGCAGCCGAAGATGGTACATTTTTGAGGTTGGTGCAGACA-GTTTTGGACCC 1022
Query 1239 ATTGCAACAAGTTGTTGCCGATGGATGTCACTTGACAAGGCACACCGGAGAGTCCATTTT 1298
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1023 ATTGCAACAAGTTGTTGCCGATGGATGTCACTTGACAAGGCACACCGGAGAGTCAATTTT 1082
Query 1299 AGAAGCTAGGTTCAATGGCGGTGCAGATGTTAAAAAGACAGCTCTTTCTAG 1349
|||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1083 AGAAGCTAGGTTCAATGGTGGTGCAGATGTTAAAAAGACATCTCTTTCTAG 1133
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112248418620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5