BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316165 Length=405 Score E Sequences producing significant alignments: (Bits) Value AT1G71950.1 | Symbols: | Proteinase inhibitor, propeptide | ch... 532 7e-151 > AT1G71950.1 | Symbols: | Proteinase inhibitor, propeptide | chr1:27080184-27081613 REVERSE LENGTH=720 Length=720 Score = 532 bits (288), Expect = 7e-151 Identities = 378/418 (90%), Gaps = 20/418 (5%) Strand=Plus/Plus Query 1 ATGCAAACATTTGCTCGTGGAACAAGCGTCTACCTGAACCACCA-catcatcatcatcat 59 |||||||||||||||| ||||||||| ||||||| ||| || ||||||| || || | Sbjct 41 ATGCAAACATTTGCTCCTGGAACAAGAGTCTACC---ACC-TCATCATCATCGTCTTCTT 96 Query 60 catcGTCTTCTTCTTAT--TC--TCATCG-----ATCGTCATGGC---TGAATCTACTGG 107 | || |||||| ||||| || || ||| ||||||||||| ||||| ||| || Sbjct 97 CTTCTTCTTCTGCTTATCATCGTTCTTCGCTTCAATCGTCATGGCTGATGAATATACCGG 156 Query 108 AGCAGCAACGGTATCGTCCGAAGCAAAGGTTCACATCATCTACACCGAGAAACCCACCGA 167 || |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 157 AGAAGCAACGGGATCGTCGGAAGCAAAGGTTCACATCATCTACACCGAGAAACCTACCGA 216 Query 168 TGAAGAACCTAAAACCTATCATCTCCGTACCCTTTCCTCTGCTCTCGGCAGTGAGGAAGC 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 TGAAGAACCTAAAACCTATCATCTCCGTACCCTTTCCTCTGCTCTCGGCAGTGAGGAAGC 276 Query 228 TGCAAAAGATGCTTTGATTTACAGTTACAAGGAAGCTGCTTCTGGTTTTTCAGCTAAGCT 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 277 TGCAAAAGATGCTTTGATTTACAGTTACAAGGAAGCTGCTTCTGGTTTTTCAGCTAAGCT 336 Query 288 CACACCTGAGCAAGTCTCCGAGATATCAAAACAACCAGGTGTAATTCAAGTTGTGCCAAG 347 ||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| Sbjct 337 CACTCCTGAGCAAGTCGCTGAGATATCAAAACAACCAGGTGTGATTCAAGTTGTGCCAAG 396 Query 348 CCAGACTTATCAGCTGCACAAACCtggtggtggtggtggtggtTTCAAGTTGACCTAA 405 |||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 397 CCAGACTTATCAGCTGCACAAACCTGGTGGTGGTGGTGGT--TT-CAAGTTGACCTAA 451 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19152012369 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5