BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg316170
Length=1500
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72000.1 | Symbols: | Plant neutral invertase family protei... 2244 0.0
AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:602... 721 0.0
> AT1G72000.1 | Symbols: | Plant neutral invertase family protein
| chr1:27103277-27105663 FORWARD LENGTH=1500
Length=1500
Score = 2244 bits (1215), Expect = 0.0
Identities = 1407/1502 (94%), Gaps = 4/1502 (0%)
Strand=Plus/Plus
Query 1 ATGTCTTTAAGCCTCTACGACAGTGCACACTCACTAGACGGTAGGTCGGGTTGGGATACT 60
|||||||||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||
Sbjct 1 ATGTCTTTAAGCCTTTACGACAGTGCACATTCACTAGACGGTAAGTCTGGTTGGGATACT 60
Query 61 CCGGTTTTCTCCATGAAAGACTCGTCT-GACCTTAACCCGATGGTCACAGAAGCTTGGGA 119
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct 61 CCGGTTTTCTCCATGAAAGACTC-AATGGATCGTAACCCGATGGTCACAGAAGCTTGGGA 119
Query 120 GGCTCTCTGCCGGTCTCAGGTCTACTTCCGAGAAAAACCGGTAGGAACAATCGCCGCCTA 179
||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||
Sbjct 120 GGCTCTCTGCCAGTCTCAGGTCTACTTCCGGGGAAAACCGGTAGGAACCATCGCCGCCTA 179
Query 180 CGACCATGCTTCCGAGGAGGTCTTGAACTATGATCAGGTATTCGTACGTGATTTTGTACC 239
|||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 180 CGACCATGCTTCAGAAGAGGTCTTGAACTATGATCAGGTGTTCGTACGTGATTTTGTACC 239
Query 240 GAGCGCTCTAGCGTTTCTGATGAAAGGAGAGCCTGACATTGTGAAGAACTTTCTCCTAAA 299
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 240 GAGTGCTCTAGCATTTCTGATGAATGGAGAGCCTGAAATTGTGAAGAACTTTCTCCTGAA 299
Query 300 GACACTTCATATTCAGGGACAAGACAAAATGATCGACAAGTTCAAGCTTGGTGATGGCGC 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 300 GACACTTCATATTCAGGGACAAGACAAAATGATCGACAAGTTCAAGCTTGGTGACGGCGC 359
Query 360 AATGCCAGCGAGCTTCAAAGTTCTCCATAACCCTATCAAGAAGACGGATACGATCATCGC 419
||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 360 AATGCCAGCAAGCTTTAAAGTTCTACATAATCCTATCAAGAAGACGGATACGATTATCGC 419
Query 420 TGACTTTGGAGAGAGCGCTATAGGGAGGGTGGCTCCCGTCGACTCGGGGTTTTGGTGGAT 479
|||||||||||| ||||| || ||||| |||||||| |||||||| || || ||||||||
Sbjct 420 TGACTTTGGAGAAAGCGCCATCGGGAGAGTGGCTCCAGTCGACTCTGGCTTCTGGTGGAT 479
Query 480 CATTCTCCTCCGAGCTTACACTAAGTCTACAGGAGACCATTCTCTATCTGAGAGACCTGA 539
|||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||
Sbjct 480 CATTCTCCTCCGAGCTTACACTAAGTCTACAGGAGATCATTCTCTAGCAGAGAGACCAGA 539
Query 540 GTGCCAAAAGGGAATGAGGCTCATTCTCTCTTTATGTCTCTCTGAGGGGTTTGATACTTT 599
|||||||||||||||||| ||||| || ||||| |||||||||||||| |||||||||||
Sbjct 540 GTGCCAAAAGGGAATGAGACTCATACTTTCTTTGTGTCTCTCTGAGGGTTTTGATACTTT 599
Query 600 TCCGACATTGCTCTGCGCAGACGGTTGCTCCATGGTCGATCGTAGGATGGGCATTTACGG 659
|||||| ||||| |||||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct 600 TCCGACTTTGCTTTGCGCAGATGGTTGCTCGATGGTCGATCGTAGAATGGGCATTTACGG 659
Query 660 CTATCCGATCGAGATTCAAGCCCTCTTTTTCATGGCTCTTCGATTCGCACTCTCGATGCT 719
||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 660 CTATCCGATTGAGATCCAAGCCCTCTTTTTCATGGCTCTTCGATCCGCACTCTCAATGCT 719
Query 720 GAAACATGATTCTGAGGGTAAAGAGTTTATGGAAAAGATAGTGACGCGGCTTCACGCGCT 779
||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||
Sbjct 720 GAAACATGATTCTGAGGGTAAAGAGTTCATGGAAAAGATAGTGAAGCGGCTGCACGCACT 779
Query 780 GAGCTTCCACATGAGAAGCTACTTTTGGCTCGATTTCCAGCAGCTCAATGACATTTACCG 839
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 AAGCTTCCATATGAGAAGCTACTTTTGGCTCGATTTCCAGCAGCTCAATGACATTTACCG 839
Query 840 TTATAAGACGGAGGAATACTCACACACCGCGGTAAACAAGTTCAACGTCATCCCTGACTC 899
||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 840 TTACAAGACGGAGGAGTACTCTCACACCGCGGTAAACAAGTTCAACGTAATCCCTGACTC 899
Query 900 CATTCCGGATTGGATCTTCGACTTCATGCCTCTCAGAGGTGGCTACTTCATTGGAAACGT 959
||| || ||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||
Sbjct 900 CATCCCTGATTGGATCTTTGACTTCATGCCTCTCCGAGGTGGCTACTTCGTTGGAAATGT 959
Query 960 CAGTCCCGCCCGCATGGACTTCAGGTGGTTTGCGTTGGGAAATTGTATCGCAATTATTTC 1019
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 960 CAGTCCCGCCCGCATGGACTTCAGGTGGTTTGCGTTAGGAAATTGTATCGCAATTCTTTC 1019
Query 1020 CTCATTGGCCACGCCAGAGCAGTCCATGGCCATCATGGACCTGATTGAGGCCCGGTGGGA 1079
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1020 CTCATTGGCCACACCAGAGCAGTCCATGGCGATCATGGACCTGATTGAGGCCCGGTGGGA 1079
Query 1080 GGAACTGGTTGGAGAGATGCCGTTGAAGATATGTTATCCGGCGATGGAGAGTCACGAGTG 1139
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AGAACTTGTGGGAGAGATGCCGTTGAAGATATGTTATCCGGCGATGGAGAGTCACGAGTG 1139
Query 1140 GCGTATCGTCACTGGCTGTGACCCTAAGAACACACGGTGGAGCTACCACAACGGAGGCTC 1199
| | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1140 GGGGATTGTCACTGGCTGTGACCCTAAGAACACAAGGTGGAGCTACCACAACGGAGGCTC 1199
Query 1200 TTGGCCAGTGCTTCTATGGTTGCTAACGGCGGCAAGCATAAAGACCGGACGACCACAAAT 1259
||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 1200 TTGGCCAGTGCTTCTATGGTTACTAACGGCGGCAAGCATAAAGACTGGACGGCCACAAAT 1259
Query 1260 AGCACGACGGGCAATAGAGTTGGCGGAGGCACGACTATTGAAAGATGGATGGCCGGAGTA 1319
|||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1260 AGCACGACGGGCTATAGAGTTGGCGGAGGCACGACTGTTGAAGGATGGATGGCCGGAGTA 1319
Query 1320 CTACGACGGAAAGTCTGGAAGGTTCATCGGAAAACAGGCCAGAAAATTTCAGACATGGTC 1379
||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||||
Sbjct 1320 CTACGACGGAAAGTCTGGAAGATTCATCGGAAAACAGGCTAGGAAATCTCAGACATGGTC 1379
Query 1380 AATCGCTGGCTATTTGGTGGCCAAGATGATGATGGATGATCCAACGCATGTAGGAATGAT 1439
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1380 AATCGCTGGCTATTTGGTCGCCAAGATGATGATGGATGATCCAACGCATGTGGGAATGAT 1439
Query 1440 CTCAATGGAAGAAGAGAAACATATGAAACCTCCTCTTAAGA-GATCTTCTTCTTGGACTT 1498
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1440 CTCAATGGAAGAAGAGAAACATATGAAACCTCCTCTTA-GAAGATCTTCTTCTTGGACTT 1498
Query 1499 AA 1500
||
Sbjct 1499 AA 1500
> AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:6021164-6023873
REVERSE LENGTH=2032
Length=2032
Score = 721 bits (390), Expect = 0.0
Identities = 1049/1367 (77%), Gaps = 46/1367 (3%)
Strand=Plus/Plus
Query 155 AACCGGTAGGAACAATCGCCGCCTACGACCATGCTTCCGAGGAGGTCTTGAACTATGATC 214
|||| || || || || || || || |||||||| |||||||||||||||||||||||||
Sbjct 536 AACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAACTATGATC 595
Query 215 AGGTATTCGTACGTGATTTTGTACCGAGCGC-TCTAGCGTTTCTGATGAAAGGAGAGCCT 273
|||| || |||||||| |||||||| || || | | |||||||||||||| ||||||||
Sbjct 596 AGGTGTTTGTACGTGACTTTGTACCAAGTGCAT-TGGCGTTTCTGATGAATGGAGAGCCC 654
Query 274 GACATTGTGAAGAACTTTCTC-CTAAAGACACTTCATATTCAGGGACAAGACAAAATGAT 332
|| || ||||| ||||| || || ||||||||||| |||| || || ||| | |
Sbjct 655 GATATAGTGAAAAACTT-CTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAAACGGGT 713
Query 333 CGACAAGTTCAAGCTTGGTGATGGCGCAATGCCAGCGAGCTTCAAAGTTCTCCATAACCC 392
||| |||||||||||| || |||| ||||||||||| ||||| || || ||| | ||
Sbjct 714 TGACCGGTTCAAGCTTGGGGAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCATGATCC 773
Query 393 TA-T-CA-AGAAGACGGATACGATCATCGCTGACTTTGGAGAGAGCGCTATAGGGAGGGT 449
| | | | || || || || || || || || |||||||| ||||||||||| || ||
Sbjct 774 -AGTTCGTA-AA-ACCGACACAATTATTGCGGATTTTGGAGAAAGCGCTATAGGAAGAGT 830
Query 450 GGCTCCCGTCGACTCGGGGTTTTGGTGGATCATTCTCCTCCGAGCTTACACTAAGTCTAC 509
|| || || || || || || ||||||||||| || ||||| |||||||| || |||||
Sbjct 831 AGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAATCTAC 890
Query 510 AGGAGACCATT--CTCTATCTGAGAGACCTGAGTGCCAAAAGGGAATGAGGCTCATTCTC 567
||||| || || ||||||||| ||| ||||| || | |||||||||||| || |||
Sbjct 891 GGGAGAT--TTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATACTC 948
Query 568 TCT-TTATGTCTC-TCTGAGGGGTTTGATACTTTTCCGACA-TTGCTCTGCGCAGACGGT 624
||| || || || || || || ||||||||||| || || || || || || ||||||
Sbjct 949 TCTCTT-TG-CTTATCCGAAGGTTTTGATACTTTCCCTACGCTT-CTTTGTGCTGACGGT 1005
Query 625 TGCTCCATGGTCGATCGTAGGATGGGCATTTACGGCTATCCGATCGAGATTCAAGCCCTC 684
|| || ||||| ||| | || ||||| |||| || ||||| || ||||||||||| ||
Sbjct 1006 TGTTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGCTCTG 1065
Query 685 TTTTTCATGGCTCTTC-GATTCGCACTC-TCGATGCTGAAAC-ATGATTCTGAGGGTAAA 741
||||||||||| || ||| ||| || |||||||| |||| | || || ||| |
Sbjct 1066 TTTTTCATGGCA-TTGAGATGCGC-CTTGTCGATGCTTAAACCA-GACGAGGAAGGTCGA 1122
Query 742 GAGTTT-ATGGAAAAGATAGTGACGCGGCTTCACGCGCTGAGCTTCCACATGAGAAGCTA 800
|| ||| || |||| ||| |||| | | |||||||||||||| ||||| ||| | || ||
Sbjct 1123 GA-TTTCATAGAAAGGATTGTGAAGAGACTTCACGCGCTGAGTTTCCATATGCGCAGTTA 1181
Query 801 CTTTTGGCTCGA-TTTCCAGCAGCTCAATGACATTTACCGTTATAAGACGGAGGAATACT 859
||||||||| || |||| | || ||||| || || || | || ||||| ||||| ||||
Sbjct 1182 CTTTTGGCTTGACTTTCAA-CAACTCAACGATATCTATAGGTACAAGACAGAGGAGTACT 1240
Query 860 CACACACCGCGGTAAACAAGTTCAACGTCATCCCTGACTCCATTCCGGATTGGATCTTCG 919
||||||||||||| |||||||||||||| || || ||||| || || || ||| | ||||
Sbjct 1241 CACACACCGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGGTTTTCG 1300
Query 920 ACTTCATGCCTCTCAGAGGTGGCTACTTCATTGGAAACGTCAGTCCCG-CCCGCATGGAC 978
|||| ||||||||| | || || || || | || || || || |||| |||| |||||
Sbjct 1301 ACTTTATGCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAG-CCCGGCCCGTATGGAT 1359
Query 979 TTCAGGTGGTTTGCGTTGGGAAATTGTATCGCAATTATTTCCTCATTGGCCACGCCAGAG 1038
|||||||||||| | || ||||||||| || | || |||| || ||||| || || ||
Sbjct 1360 TTCAGGTGGTTTTCCTTAGGAAATTGTGTCTCCATCCTTTCTTCCTTGGCAACTCCGGAT 1419
Query 1039 CAGTCCATGGCCATCATGGACCTGATTGAGGC-CCGGTGGGAGGAACTGGTTGGAGAGAT 1097
||||| ||||| || |||||||| | ||| | ||| |||||||| || || || |||||
Sbjct 1420 CAGTCAATGGCTATTATGGACCTCCTCGAG-CACCGTTGGGAGGAGCTAGTAGGCGAGAT 1478
Query 1098 GCCGTTGAAGATATGTTATCCG-GCGATGGAGAGTCACGAGTGGCGTATCGTCACTGGCT 1156
|||| | ||||||||||| || || || || || ||||||||||| || || || || |
Sbjct 1479 GCCGCTCAAGATATGTTACCCTTGC-ATCGAAAGCCACGAGTGGCGGATTGTTACCGGTT 1537
Query 1157 GTGACCCTAAGAACAC-ACGGTGGAGCTACCACAACGGAGGCTCTTGGCCAGTGCTT-CT 1214
|||| ||||| ||||| | ||||||| ||||||||||| || ||||||||||| || ||
Sbjct 1538 GTGATCCTAAAAACACGA-GGTGGAGTTACCACAACGGTGGATCTTGGCCAGTA-TTGCT 1595
Query 1215 ATGGTTGCTAACGGCGGCAAGCATAAAGACCGGACGACCACAAATAGC-ACGACGGGCAA 1273
||| ||| ||||||||| |||| ||||| ||||| || |||||||| | |||| || |
Sbjct 1596 GTGGACGCTGACGGCGGCATGCATCAAGACTGGACGGCCTCAAATAGCGA-GACGTGCGA 1654
Query 1274 TAGAGT-TGGCGGAGGCACGACTATTGAAAGATGGATGGCCGGAGTACTACGACGGAAAG 1332
| || | | || |||| ||| |||| | |||||||| ||||| || || |||
Sbjct 1655 TTGA-TCTAATTGAATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAG 1713
Query 1333 TCT-GGAAGGTTCATCGGAAAACAGGCCAGAAAATTTCAGACATGGTCAATCGCTGGCTA 1391
| ||||||| | | |||||||| || || || | ||||| ||||||||||| || ||
Sbjct 1714 -CAAGGAAGGTACGTTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGGTTA 1772
Query 1392 TTTGGTGGCCAAGATGATGATGGATGATCCAACGCATGTAGGAATGATCTCAATGGAAGA 1451
||||| || || |||||| | || ||||| | ||| | ||||||||||| | |||||
Sbjct 1773 CTTGGTTGCGAAAATGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGAAGA 1832
Query 1452 AGAGAAACATATGAAACCTCCTCTTAAGAGATCTTCTTCTTGGACTT 1498
||| ||||| ||||||||| | | ||||||||| |||| |||||||
Sbjct 1833 AGACAAACAGATGAAACCTGTTATCAAGAGATCTGCTTCATGGACTT 1879
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73995603330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5