BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316241 Length=1560 Score E Sequences producing significant alignments: (Bits) Value AT1G72810.1 | Symbols: | Pyridoxal-5'-phosphate-dependent enzy... 2396 0.0 AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-depend... 841 0.0 > AT1G72810.1 | Symbols: | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr1:27398591-27400417 REVERSE LENGTH=1744 Length=1744 Score = 2396 bits (1297), Expect = 0.0 Identities = 1476/1562 (94%), Gaps = 13/1562 (1%) Strand=Plus/Plus Query 1 ATGGCCTCATTCTCTC-TCCTCCACTCCGTCACCTACTTTCCTTCCCACTCTGAAACCTC 59 |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 25 ATGGCCTCATTCTCTCTTCC-CCACTCCGCCACCTACTTTCCTTCCCACTCTGAAACCTC 83 Query 60 ACTTAAACCTTActccgccgcttccttcaccgtccgctgcacctcctccgcctccgcctc 119 |||||||||| ||||||||||||||||||||||||| |||| |||||||||| Sbjct 84 ACTTAAACCTCACTCCGCCGCTTCCTTCACCGTCCGTTGCA---------CCTCCGCCTC 134 Query 120 tcccgccgttcctccACAAACTCCGCAGAAACACCGCCGTTCCCCCGAAGAGAACATTCG 179 |||||||||||||||||| ||||| ||||||| ||| ||||| ||||| ||||||||||| Sbjct 135 TCCCGCCGTTCCTCCACAGACTCCACAGAAACCCCGTCGTTCACCCGATGAGAACATTCG 194 Query 180 AGACGAAGCTCGTCGCCGTCCTCATCAACTCCAAAACCTCTCCGCACGCTACGTCCCTTT 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 195 AGACGAAGCTCGTCGCCGTCCTCATCAACTCCAAAACCTCTCCGCACGTTACGTCCCTTT 254 Query 240 CAACGCTCCACCTTCTTCAACCGAATCCTACTCCCTCGACGAGATTGTCTACCGTTCACA 299 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 255 CAACGCTCCACCTTCTTCAACAGAATCCTACTCCCTCGACGAGATCGTCTACCGTTCACA 314 Query 300 ATCCGGTGGTCTCCTCGATGTCCAACACGATTTCGCCGCCTTGAAACGCTACGACGGAGA 359 |||||||| ||||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct 315 ATCCGGTGCTCTCCTCGACGTCCAGCATGATTTCGCCGCCTTGAAACGCTACGACGGAGA 374 Query 360 ATTCTGGCGTAACCTCTTCGATTCTCGCGTCGGTAAAACCAATTGGCCGTACGGATCAGG 419 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 375 ATTCTGGCGTAACCTTTTCGATTCTCGCGTCGGTAAAACAAATTGGCCGTACGGATCAGG 434 Query 420 CGTTTGGTCGAAGAAAGAGTGGGTTCTTCCTGAGATCAACGATGACGACATCGTTTCTGC 479 ||| |||||||||||||||||||| || || |||||| |||||||||||||||| ||||| Sbjct 435 CGTGTGGTCGAAGAAAGAGTGGGTACTCCCCGAGATCGACGATGACGACATCGTCTCTGC 494 Query 480 TTTTGAAGGAAACTCGAATTTGTTCTGGGCTGAGAGATTTGGTAACCAGTATCTGCAAAT 539 ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct 495 TTTTGAAGGAAACTCAAATCTCTTCTGGGCTGAGAGATTTGGTAAACAGTATCTGCAAAT 554 Query 540 GAACGATCTTTGGGTGAAACATTGTGGAATTAGCCACACTGGTTCGTTTAAAGATCTGGG 599 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 555 GAACGATCTTTGGGTGAAACATTGTGGAATCAGCCACACTGGCTCCTTTAAAGATCTGGG 614 Query 600 CATGACTGTTCTTGTTTCTCAGGTGAATCGTCTCCGGAAAATGAACAAACCAGTCATCGG 659 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 615 CATGAGTGTTCTCGTTTCTCAGGTGAATCGTCTCCGGAAAATGAACAAACCAGTCATCGG 674 Query 660 AGTTGGATGCGCTTCTACTGGAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGC 719 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 AGTTGGTTGCGCTTCTACTGGAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGC 734 Query 720 TGGAATCCCGTCGATCGTTTTCTTACCGGCGGATAAAATCTCCATGGCTCAGCTTGTGCA 779 ||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||| Sbjct 735 TGGAATCCCCTCGATTGTCTTCTTACCTGCGGATAAAATCTCCATGGCTCAGCTTGTGCA 794 Query 780 GCCAATTGCTAATGGGGCTTTTGTGCTTAGTATTGATACTGATTTCGACGGATGTATGCA 839 ||| ||||| || || || ||||||||||||||||| |||||||| |||||||||||||| Sbjct 795 GCCGATTGCAAACGGAGCGTTTGTGCTTAGTATTGACACTGATTTTGACGGATGTATGCA 854 Query 840 TTTGATCAGAGAAGTAACGGCGGAGCTTCCGATTTACTTAGCGAACTCTCTCAACAGCCT 899 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct 855 TTTGATCAGAGAAGTTACGGCGGAGCTTCCTATTTACTTGGCGAACTCTCTCAACAGCCT 914 Query 900 CCGTCTCGAAGGACAAAAGACGGCGGCGGTTGAGATAT-TGCAGCAGTTTAATTGGCAAG 958 |||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct 915 CCGTCTCGAAGGTCAAAAGACGGCGGCGATTGAGAT-TCTGCAGCAGTTTAATTGGCAAG 973 Query 959 TTCCTGATTGGGTCATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAG 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 974 TTCCTGATTGGGTCATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAG 1033 Query 1019 GGTTTCATATGTGTAAAGAGTTAGGTCTTGTTGATAGAATCCCTAGACTTGTGTGTGCTC 1078 ||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||| Sbjct 1034 GGTTTCATATGTGTAAAGAGTTAGGTCTTGTTGATCGTATCCCTAGGCTTGTTTGTGCTC 1093 Query 1079 AAGCTGCTAACGCTAATCCACTTTACTTGCACTACAAATCTGGGTTTAAAGAAGATTTCA 1138 |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1094 AAGCTGCTAATGCAAATCCACTTTACTTGCATTACAAATCTGGGTTTAAAGAAGATTTCA 1153 Query 1139 ATCCATTGAAAGCAAACACTACATTTGCTTCTGCGATTCAGATCGGCGACCCTGTTTCGA 1198 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct 1154 ATCCATTGAAAGCAAACACTACATTTGCTTCTGCTATTCAGATTGGTGACCCTGTTTCGA 1213 Query 1199 TTGATAGAGCTGTGTATGCGTTGAAGAAATCTAATGGCATTGTTGAGGAAGCTACTGAAG 1258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct 1214 TTGATAGAGCTGTGTATGCGTTGAAGAAATCTAATGGGATTGTTGAGGAAGCTACAGAGG 1273 Query 1259 AAGAGTTGATGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATA 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1274 AAGAGTTGATGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATA 1333 Query 1319 CAGGTGTTGCATTGACGGCGTTGATAAAGCTGAGGAAGTCTGGAGTTATCGAAGCGAATG 1378 | ||||||||||||||||||||||| |||||||| ||||| |||||||| | |||||||| Sbjct 1334 CTGGTGTTGCATTGACGGCGTTGATGAAGCTGAGAAAGTCAGGAGTTATTGGAGCGAATG 1393 Query 1379 ATCGGACTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACGCAGAGTAAGATTGATT 1438 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 1394 ATCGGACTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACACAAAGTAAGATTGATT 1453 Query 1439 ATCATTCTAAGAATATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCGGTGAAGGTTA 1498 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1454 ATCATTCTAAGAACATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCAGTGAAGGTTA 1513 Query 1499 AGGCAAAGTTTGGTTCAGTTATGGATGTTCTCAAGGAGTATTTGAAGAGCAATGATAAAT 1558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1514 AGGCAAAGTTTGGTTCAGTTATGGATGTTCTCAAGGAGTATTTGAAGAGCAATGATAAAT 1573 Query 1559 AA 1560 || Sbjct 1574 AA 1575 > AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr4:14599216-14601055 REVERSE LENGTH=1840 Length=1840 Score = 841 bits (455), Expect = 0.0 Identities = 1025/1296 (79%), Gaps = 56/1296 (4%) Strand=Plus/Plus Query 268 TACTCCCTCGACGAGATTGTCTACCGT-TCACAATCCGGTGGTCTCCTCGATGTCCAACA 326 ||||| ||||||||||| || |||||| | | ||||||||| | || |||||| |||| Sbjct 327 TACTCTCTCGACGAGATCGTGTACCGTAGC-CGCTCCGGTGGTTTGCTTGATGTCGAACA 385 Query 327 CGATTTCGCCGCCTTGAAACGCTACGACGGAGAAT-TCTGGCGTAACCTCTTCGATTCTC 385 |||| | | || ||||| || | ||| || | | | |||||| | ||||||||||| | Sbjct 386 CGATATGGAGGCTTTGAAGCGATTCGATGGCGCGTAT-TGGCGTGATCTCTTCGATTCGC 444 Query 386 GCGTCGGTAAAACCA-ATTGGCCGTACGGATCAGGCGTTTGGTCGAAGAAAGAGTGGGTT 444 | || ||||||| || | ||||| || ||||| || |||||||||||||||||||||||| Sbjct 445 GTGTTGGTAAAAGCACA-TGGCCTTATGGATCGGGTGTTTGGTCGAAGAAAGAGTGGGTT 503 Query 445 CTTCCTGAGATCAACGATGACGACATCGTTTCTGCTTTTGAAGGAAACTCGAATTTGTTC 504 |||||||||||| | || |||||||||||||| ||||||||||||||||||||| ||||| Sbjct 504 CTTCCTGAGATCGATGACGACGACATCGTTTCAGCTTTTGAAGGAAACTCGAATCTGTTC 563 Query 505 TGGGCTGAGAGATTTGGTAACCAGTATCT-GCAAATGAACGATCTTTGGGTGAAACATTG 563 ||||| |||||||||||||| |||| ||| | | |||| ||||| ||||||||||| || Sbjct 564 TGGGCAGAGAGATTTGGTAAGCAGTTTCTAGGTA-TGAATGATCTGTGGGTGAAACACTG 622 Query 564 TGGAATTAGCCACACTGGTTCGTTTAAAG-ATCTGGGCATGACTGTTCTTGTTTC-TCAG 621 ||| ||||| || || || |||| ||| |||| || ||||||||| ||| || ||| Sbjct 623 TGGGATTAGTCATACAGGAA-GTTTCAAGGATCTTGGAATGACTGTT-TTGGTTAGTCAA 680 Query 622 GTGAATCGTCTCCGGAAA-ATGAA-CAAACCAGTCATCGGAGTTGGATGCGCTTCTACTG 679 || |||||||| | ||| ||||| | | || || | || || ||||| ||||| || | Sbjct 681 GTTAATCGTCTGAG-AAAGATGAAACGA-CCTGTGGTTGGTGTCGGATGTGCTTCCACCG 738 Query 680 GAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGCTGGAATCCCGTCGATCGT-T 738 ||||||| || |||||||| ||||||||||| || |||||||||||||| ||||| || | Sbjct 739 GAGATACTTCTGCTGCTCTATCTGCTTACTGCGCCTCCGCTGGAATCCCATCGATTGTGT 798 Query 739 TTCTTACCGGCGGATAAAATCTCCATGGCTCAGCTTGTGCAGCCAATTGCTAATGGGGCT 798 || ||||||||| | || ||||| ||||||||||| || ||||| || |||||||| || Sbjct 799 TT-TTACCGGCGAACAAGATCTCTATGGCTCAGCTGGTTCAGCCGATAGCTAATGGTGCG 857 Query 799 TTTGTGCTT-AGTATTGATACTGATTTCGACGGATGTATGCATTTGATCAGAGA-AGTAA 856 ||||| || |||||||| |||||||| || || |||||| | |||| ||||| | ||| Sbjct 858 TTTGTT-TTGAGTATTGACACTGATTTTGATGGGTGTATGAAGCTGATTAGAGAGA-TAA 915 Query 857 CGGCGGAGCTT-CCGATTTACTTAGCGAACTC-TCTCAACAGCCTCCG-TCTCGAAGGAC 913 | ||||| || |||||||| || ||||| || | | || || | | | | ||||| | Sbjct 916 CTGCGGAA-TTGCCGATTTATTTGGCGAATTCGT-TGAATAGTTTGAGGT-TAGAAGGGC 972 Query 914 A-AAAGACGGCGGCGGTTGAGATATTGCAGCAGTTTAATTGGCAAGTTCCTGATTGGGTC 972 | ||| || || || ||||||| |||||||||||| |||||||||||||||||||||| Sbjct 973 AGAAA-ACTGCAGCTATTGAGATTTTGCAGCAGTTTGATTGGCAAGTTCCTGATTGGGTG 1031 Query 973 ATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAGGGTTTCATATGTGT 1032 |||||||||||||| || || || ||||||||||| ||||||||||||||| | |||||| Sbjct 1032 ATTGTTCCTGGAGGTAACCTAGGAAACATCTATGCCTTTTACAAAGGGTTTAAGATGTGT 1091 Query 1033 AAAGAGTTAGGTCTTGTTGATAGAATCCCTAG-ACTTGTGTGTGCTCAAGCTGCTAACGC 1091 |||| | || ||||| ||||| ||||| || | | || ||||| ||||| ||||| || Sbjct 1092 CAAGAACTGGGACTTGTCGATAGGATCCCGAGGA-TGGTCTGTGCACAAGCAGCTAATGC 1150 Query 1092 TAATCCACTTTACTTGCACTACAAATCTGGGTTTAAAGAAGATTTCAATCC-ATTGAAAG 1150 |||||| ||||||||||||||||| ||||| || ||| || ||||| || || || | Sbjct 1151 TAATCCTCTTTACTTGCACTACAAGTCTGG-TTGGAAG--GACTTCAAGCCCAT-GACTG 1206 Query 1151 CAAACACTACATTT-GCTTCTGCGATTCAGATCGGCGACCCTGTTTCGATTGATAGAGCT 1209 ||| || || ||| || ||||||||||||||||| |||||||| || || ||||||||| Sbjct 1207 CAAGTACCAC-TTTCGCCTCTGCGATTCAGATCGGTGACCCTGTCTCCATCGATAGAGCT 1265 Query 1210 GTGTATGCGT-TGAAGAAAT-CTAATGGCATTGTTGAGGAAGCTACTGAAGAAGAGTTGA 1267 ||||| || | | ||||| | | ||||| ||||| || ||||| || || || ||| ||| Sbjct 1266 GTGTACGC-TCTCAAGAAGTGC-AATGGTATTGTAGAAGAAGCCACAGAGGAGGAGCTGA 1323 Query 1268 TGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATACAGGTGTTG 1327 ||||||| | |||| || ||||| || || |||||||| ||||| ||||||||||||| Sbjct 1324 TGGATGCGATGGCTCAAGCGGATTCGACAGGAATGTTTATCTGTCCTCATACAGGTGTTG 1383 Query 1328 CAT-TGACGGCGT-TGATAAAGCTGAGGAAGTCT-GGAGTTATCGAAGCGAATGATCGGA 1384 | | | || || | || | ||||||||||| || ||||| || | | ||| |||||| | Sbjct 1384 C-TCTAACTGC-TCTGTTCAAGCTGAGGAA-TCAAGGAGTGATTGCACCGACTGATCGAA 1440 Query 1385 CTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACGCAGAGTAAGATTGATTATCATT 1444 ||||||| |||||||| |||||||| ||||||||||| ||| |||||| |||||||| | Sbjct 1441 CTGTGGTAGTGAGTACTGCTCATGGGTTGAAGTTTACTCAGTCTAAGATAGATTATCACT 1500 Query 1445 CTAA-GAATATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCGGT-GAAGGTTAAGGC 1502 | || | || || |||||||| ||||| | ||||| || || || | | || || Sbjct 1501 CCAATGCC-ATCCCTGACATGGCTTGCAGATTCTCCAATCCTCCTGTTGATG-TGAAAGC 1558 Query 1503 AAAGTTT-GGTTCAGTTATGGATGTTCTCAAGGAGT 1537 | | ||| || | || ||||||||||||||| ||| Sbjct 1559 AGA-TTTCGGAGCTGTCATGGATGTTCTCAAG-AGT 1592 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77007636030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5