BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg316241
Length=1560
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72810.1 | Symbols: | Pyridoxal-5'-phosphate-dependent enzy... 2396 0.0
AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-depend... 841 0.0
> AT1G72810.1 | Symbols: | Pyridoxal-5'-phosphate-dependent enzyme
family protein | chr1:27398591-27400417 REVERSE LENGTH=1744
Length=1744
Score = 2396 bits (1297), Expect = 0.0
Identities = 1476/1562 (94%), Gaps = 13/1562 (1%)
Strand=Plus/Plus
Query 1 ATGGCCTCATTCTCTC-TCCTCCACTCCGTCACCTACTTTCCTTCCCACTCTGAAACCTC 59
|||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 25 ATGGCCTCATTCTCTCTTCC-CCACTCCGCCACCTACTTTCCTTCCCACTCTGAAACCTC 83
Query 60 ACTTAAACCTTActccgccgcttccttcaccgtccgctgcacctcctccgcctccgcctc 119
|||||||||| ||||||||||||||||||||||||| |||| ||||||||||
Sbjct 84 ACTTAAACCTCACTCCGCCGCTTCCTTCACCGTCCGTTGCA---------CCTCCGCCTC 134
Query 120 tcccgccgttcctccACAAACTCCGCAGAAACACCGCCGTTCCCCCGAAGAGAACATTCG 179
|||||||||||||||||| ||||| ||||||| ||| ||||| ||||| |||||||||||
Sbjct 135 TCCCGCCGTTCCTCCACAGACTCCACAGAAACCCCGTCGTTCACCCGATGAGAACATTCG 194
Query 180 AGACGAAGCTCGTCGCCGTCCTCATCAACTCCAAAACCTCTCCGCACGCTACGTCCCTTT 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 195 AGACGAAGCTCGTCGCCGTCCTCATCAACTCCAAAACCTCTCCGCACGTTACGTCCCTTT 254
Query 240 CAACGCTCCACCTTCTTCAACCGAATCCTACTCCCTCGACGAGATTGTCTACCGTTCACA 299
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 255 CAACGCTCCACCTTCTTCAACAGAATCCTACTCCCTCGACGAGATCGTCTACCGTTCACA 314
Query 300 ATCCGGTGGTCTCCTCGATGTCCAACACGATTTCGCCGCCTTGAAACGCTACGACGGAGA 359
|||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 315 ATCCGGTGCTCTCCTCGACGTCCAGCATGATTTCGCCGCCTTGAAACGCTACGACGGAGA 374
Query 360 ATTCTGGCGTAACCTCTTCGATTCTCGCGTCGGTAAAACCAATTGGCCGTACGGATCAGG 419
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 375 ATTCTGGCGTAACCTTTTCGATTCTCGCGTCGGTAAAACAAATTGGCCGTACGGATCAGG 434
Query 420 CGTTTGGTCGAAGAAAGAGTGGGTTCTTCCTGAGATCAACGATGACGACATCGTTTCTGC 479
||| |||||||||||||||||||| || || |||||| |||||||||||||||| |||||
Sbjct 435 CGTGTGGTCGAAGAAAGAGTGGGTACTCCCCGAGATCGACGATGACGACATCGTCTCTGC 494
Query 480 TTTTGAAGGAAACTCGAATTTGTTCTGGGCTGAGAGATTTGGTAACCAGTATCTGCAAAT 539
||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct 495 TTTTGAAGGAAACTCAAATCTCTTCTGGGCTGAGAGATTTGGTAAACAGTATCTGCAAAT 554
Query 540 GAACGATCTTTGGGTGAAACATTGTGGAATTAGCCACACTGGTTCGTTTAAAGATCTGGG 599
|||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 555 GAACGATCTTTGGGTGAAACATTGTGGAATCAGCCACACTGGCTCCTTTAAAGATCTGGG 614
Query 600 CATGACTGTTCTTGTTTCTCAGGTGAATCGTCTCCGGAAAATGAACAAACCAGTCATCGG 659
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 CATGAGTGTTCTCGTTTCTCAGGTGAATCGTCTCCGGAAAATGAACAAACCAGTCATCGG 674
Query 660 AGTTGGATGCGCTTCTACTGGAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGC 719
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 675 AGTTGGTTGCGCTTCTACTGGAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGC 734
Query 720 TGGAATCCCGTCGATCGTTTTCTTACCGGCGGATAAAATCTCCATGGCTCAGCTTGTGCA 779
||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 735 TGGAATCCCCTCGATTGTCTTCTTACCTGCGGATAAAATCTCCATGGCTCAGCTTGTGCA 794
Query 780 GCCAATTGCTAATGGGGCTTTTGTGCTTAGTATTGATACTGATTTCGACGGATGTATGCA 839
||| ||||| || || || ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 795 GCCGATTGCAAACGGAGCGTTTGTGCTTAGTATTGACACTGATTTTGACGGATGTATGCA 854
Query 840 TTTGATCAGAGAAGTAACGGCGGAGCTTCCGATTTACTTAGCGAACTCTCTCAACAGCCT 899
||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 855 TTTGATCAGAGAAGTTACGGCGGAGCTTCCTATTTACTTGGCGAACTCTCTCAACAGCCT 914
Query 900 CCGTCTCGAAGGACAAAAGACGGCGGCGGTTGAGATAT-TGCAGCAGTTTAATTGGCAAG 958
|||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct 915 CCGTCTCGAAGGTCAAAAGACGGCGGCGATTGAGAT-TCTGCAGCAGTTTAATTGGCAAG 973
Query 959 TTCCTGATTGGGTCATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAG 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 TTCCTGATTGGGTCATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAG 1033
Query 1019 GGTTTCATATGTGTAAAGAGTTAGGTCTTGTTGATAGAATCCCTAGACTTGTGTGTGCTC 1078
||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||
Sbjct 1034 GGTTTCATATGTGTAAAGAGTTAGGTCTTGTTGATCGTATCCCTAGGCTTGTTTGTGCTC 1093
Query 1079 AAGCTGCTAACGCTAATCCACTTTACTTGCACTACAAATCTGGGTTTAAAGAAGATTTCA 1138
|||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1094 AAGCTGCTAATGCAAATCCACTTTACTTGCATTACAAATCTGGGTTTAAAGAAGATTTCA 1153
Query 1139 ATCCATTGAAAGCAAACACTACATTTGCTTCTGCGATTCAGATCGGCGACCCTGTTTCGA 1198
|||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct 1154 ATCCATTGAAAGCAAACACTACATTTGCTTCTGCTATTCAGATTGGTGACCCTGTTTCGA 1213
Query 1199 TTGATAGAGCTGTGTATGCGTTGAAGAAATCTAATGGCATTGTTGAGGAAGCTACTGAAG 1258
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 1214 TTGATAGAGCTGTGTATGCGTTGAAGAAATCTAATGGGATTGTTGAGGAAGCTACAGAGG 1273
Query 1259 AAGAGTTGATGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATA 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 AAGAGTTGATGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATA 1333
Query 1319 CAGGTGTTGCATTGACGGCGTTGATAAAGCTGAGGAAGTCTGGAGTTATCGAAGCGAATG 1378
| ||||||||||||||||||||||| |||||||| ||||| |||||||| | ||||||||
Sbjct 1334 CTGGTGTTGCATTGACGGCGTTGATGAAGCTGAGAAAGTCAGGAGTTATTGGAGCGAATG 1393
Query 1379 ATCGGACTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACGCAGAGTAAGATTGATT 1438
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1394 ATCGGACTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACACAAAGTAAGATTGATT 1453
Query 1439 ATCATTCTAAGAATATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCGGTGAAGGTTA 1498
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1454 ATCATTCTAAGAACATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCAGTGAAGGTTA 1513
Query 1499 AGGCAAAGTTTGGTTCAGTTATGGATGTTCTCAAGGAGTATTTGAAGAGCAATGATAAAT 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514 AGGCAAAGTTTGGTTCAGTTATGGATGTTCTCAAGGAGTATTTGAAGAGCAATGATAAAT 1573
Query 1559 AA 1560
||
Sbjct 1574 AA 1575
> AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent
enzyme family protein | chr4:14599216-14601055 REVERSE
LENGTH=1840
Length=1840
Score = 841 bits (455), Expect = 0.0
Identities = 1025/1296 (79%), Gaps = 56/1296 (4%)
Strand=Plus/Plus
Query 268 TACTCCCTCGACGAGATTGTCTACCGT-TCACAATCCGGTGGTCTCCTCGATGTCCAACA 326
||||| ||||||||||| || |||||| | | ||||||||| | || |||||| ||||
Sbjct 327 TACTCTCTCGACGAGATCGTGTACCGTAGC-CGCTCCGGTGGTTTGCTTGATGTCGAACA 385
Query 327 CGATTTCGCCGCCTTGAAACGCTACGACGGAGAAT-TCTGGCGTAACCTCTTCGATTCTC 385
|||| | | || ||||| || | ||| || | | | |||||| | ||||||||||| |
Sbjct 386 CGATATGGAGGCTTTGAAGCGATTCGATGGCGCGTAT-TGGCGTGATCTCTTCGATTCGC 444
Query 386 GCGTCGGTAAAACCA-ATTGGCCGTACGGATCAGGCGTTTGGTCGAAGAAAGAGTGGGTT 444
| || ||||||| || | ||||| || ||||| || ||||||||||||||||||||||||
Sbjct 445 GTGTTGGTAAAAGCACA-TGGCCTTATGGATCGGGTGTTTGGTCGAAGAAAGAGTGGGTT 503
Query 445 CTTCCTGAGATCAACGATGACGACATCGTTTCTGCTTTTGAAGGAAACTCGAATTTGTTC 504
|||||||||||| | || |||||||||||||| ||||||||||||||||||||| |||||
Sbjct 504 CTTCCTGAGATCGATGACGACGACATCGTTTCAGCTTTTGAAGGAAACTCGAATCTGTTC 563
Query 505 TGGGCTGAGAGATTTGGTAACCAGTATCT-GCAAATGAACGATCTTTGGGTGAAACATTG 563
||||| |||||||||||||| |||| ||| | | |||| ||||| ||||||||||| ||
Sbjct 564 TGGGCAGAGAGATTTGGTAAGCAGTTTCTAGGTA-TGAATGATCTGTGGGTGAAACACTG 622
Query 564 TGGAATTAGCCACACTGGTTCGTTTAAAG-ATCTGGGCATGACTGTTCTTGTTTC-TCAG 621
||| ||||| || || || |||| ||| |||| || ||||||||| ||| || |||
Sbjct 623 TGGGATTAGTCATACAGGAA-GTTTCAAGGATCTTGGAATGACTGTT-TTGGTTAGTCAA 680
Query 622 GTGAATCGTCTCCGGAAA-ATGAA-CAAACCAGTCATCGGAGTTGGATGCGCTTCTACTG 679
|| |||||||| | ||| ||||| | | || || | || || ||||| ||||| || |
Sbjct 681 GTTAATCGTCTGAG-AAAGATGAAACGA-CCTGTGGTTGGTGTCGGATGTGCTTCCACCG 738
Query 680 GAGATACCTCCGCTGCTCTCTCTGCTTACTGTGCTTCCGCTGGAATCCCGTCGATCGT-T 738
||||||| || |||||||| ||||||||||| || |||||||||||||| ||||| || |
Sbjct 739 GAGATACTTCTGCTGCTCTATCTGCTTACTGCGCCTCCGCTGGAATCCCATCGATTGTGT 798
Query 739 TTCTTACCGGCGGATAAAATCTCCATGGCTCAGCTTGTGCAGCCAATTGCTAATGGGGCT 798
|| ||||||||| | || ||||| ||||||||||| || ||||| || |||||||| ||
Sbjct 799 TT-TTACCGGCGAACAAGATCTCTATGGCTCAGCTGGTTCAGCCGATAGCTAATGGTGCG 857
Query 799 TTTGTGCTT-AGTATTGATACTGATTTCGACGGATGTATGCATTTGATCAGAGA-AGTAA 856
||||| || |||||||| |||||||| || || |||||| | |||| ||||| | |||
Sbjct 858 TTTGTT-TTGAGTATTGACACTGATTTTGATGGGTGTATGAAGCTGATTAGAGAGA-TAA 915
Query 857 CGGCGGAGCTT-CCGATTTACTTAGCGAACTC-TCTCAACAGCCTCCG-TCTCGAAGGAC 913
| ||||| || |||||||| || ||||| || | | || || | | | | ||||| |
Sbjct 916 CTGCGGAA-TTGCCGATTTATTTGGCGAATTCGT-TGAATAGTTTGAGGT-TAGAAGGGC 972
Query 914 A-AAAGACGGCGGCGGTTGAGATATTGCAGCAGTTTAATTGGCAAGTTCCTGATTGGGTC 972
| ||| || || || ||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 973 AGAAA-ACTGCAGCTATTGAGATTTTGCAGCAGTTTGATTGGCAAGTTCCTGATTGGGTG 1031
Query 973 ATTGTTCCTGGAGGCAATCTTGGTAACATCTATGCGTTTTACAAAGGGTTTCATATGTGT 1032
|||||||||||||| || || || ||||||||||| ||||||||||||||| | ||||||
Sbjct 1032 ATTGTTCCTGGAGGTAACCTAGGAAACATCTATGCCTTTTACAAAGGGTTTAAGATGTGT 1091
Query 1033 AAAGAGTTAGGTCTTGTTGATAGAATCCCTAG-ACTTGTGTGTGCTCAAGCTGCTAACGC 1091
|||| | || ||||| ||||| ||||| || | | || ||||| ||||| ||||| ||
Sbjct 1092 CAAGAACTGGGACTTGTCGATAGGATCCCGAGGA-TGGTCTGTGCACAAGCAGCTAATGC 1150
Query 1092 TAATCCACTTTACTTGCACTACAAATCTGGGTTTAAAGAAGATTTCAATCC-ATTGAAAG 1150
|||||| ||||||||||||||||| ||||| || ||| || ||||| || || || |
Sbjct 1151 TAATCCTCTTTACTTGCACTACAAGTCTGG-TTGGAAG--GACTTCAAGCCCAT-GACTG 1206
Query 1151 CAAACACTACATTT-GCTTCTGCGATTCAGATCGGCGACCCTGTTTCGATTGATAGAGCT 1209
||| || || ||| || ||||||||||||||||| |||||||| || || |||||||||
Sbjct 1207 CAAGTACCAC-TTTCGCCTCTGCGATTCAGATCGGTGACCCTGTCTCCATCGATAGAGCT 1265
Query 1210 GTGTATGCGT-TGAAGAAAT-CTAATGGCATTGTTGAGGAAGCTACTGAAGAAGAGTTGA 1267
||||| || | | ||||| | | ||||| ||||| || ||||| || || || ||| |||
Sbjct 1266 GTGTACGC-TCTCAAGAAGTGC-AATGGTATTGTAGAAGAAGCCACAGAGGAGGAGCTGA 1323
Query 1268 TGGATGCAACAGCTCTTGCTGATTCTACTGGTATGTTTATATGTCCACATACAGGTGTTG 1327
||||||| | |||| || ||||| || || |||||||| ||||| |||||||||||||
Sbjct 1324 TGGATGCGATGGCTCAAGCGGATTCGACAGGAATGTTTATCTGTCCTCATACAGGTGTTG 1383
Query 1328 CAT-TGACGGCGT-TGATAAAGCTGAGGAAGTCT-GGAGTTATCGAAGCGAATGATCGGA 1384
| | | || || | || | ||||||||||| || ||||| || | | ||| |||||| |
Sbjct 1384 C-TCTAACTGC-TCTGTTCAAGCTGAGGAA-TCAAGGAGTGATTGCACCGACTGATCGAA 1440
Query 1385 CTGTGGTGGTGAGTACAGCTCATGGATTGAAGTTTACGCAGAGTAAGATTGATTATCATT 1444
||||||| |||||||| |||||||| ||||||||||| ||| |||||| |||||||| |
Sbjct 1441 CTGTGGTAGTGAGTACTGCTCATGGGTTGAAGTTTACTCAGTCTAAGATAGATTATCACT 1500
Query 1445 CTAA-GAATATAAAGGAGATGGCTTGTAGATTGGCGAATCCACCGGT-GAAGGTTAAGGC 1502
| || | || || |||||||| ||||| | ||||| || || || | | || ||
Sbjct 1501 CCAATGCC-ATCCCTGACATGGCTTGCAGATTCTCCAATCCTCCTGTTGATG-TGAAAGC 1558
Query 1503 AAAGTTT-GGTTCAGTTATGGATGTTCTCAAGGAGT 1537
| | ||| || | || ||||||||||||||| |||
Sbjct 1559 AGA-TTTCGGAGCTGTCATGGATGTTCTCAAG-AGT 1592
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77007636030
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5