BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg316266
Length=1488
Score E
Sequences producing significant alignments: (Bits) Value
AT1G73160.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2128 0.0
> AT1G73160.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr1:27506534-27507994 FORWARD LENGTH=1461
Length=1461
Score = 2128 bits (1152), Expect = 0.0
Identities = 1338/1428 (94%), Gaps = 11/1428 (1%)
Strand=Plus/Plus
Query 1 ATGGCCTTCAAGAATCATTCTTCAAGAACTA-T-GTT-TTCTTCATCTTCCACTTCATTT 57
|||||||||||||| |||||||||||||| | | || |||||| |||||||||||||||
Sbjct 1 ATGGCCTTCAAGAACCATTCTTCAAGAACAACTCTTTCTTCTTCTTCTTCCACTTCATTT 60
Query 58 TCATTCAGGTTCACAACAATCATTACCTTAGCAATATTCATCTTTTGTTCTTCTTACTAC 117
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 61 TCATTCAGATTCACAACAATCATTACCTTAGC---ATTCATCTTTTGTTCTTCTTACTAC 117
Query 118 ATTTTATTCTCACGA-TTGGATTGCTCTCCGGTGACTTCTTCACCGGGAAATCCTCCCTT 176
||||| ||||||| | || |||| ||||||||||||||||||||||| ||||||||| ||
Sbjct 118 ATTTTCTTCTCAC-AGTTTGATTACTCTCCGGTGACTTCTTCACCGGAAAATCCTCCTTT 176
Query 177 CGCTGGAGATCTTCGAGACCTAACATCCCCTTGGAACAAACTCTCTCTGGGACCAATCTC 236
||| ||||||||||||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct 177 CGCAGGAGATCTTCGAGACCTGACATTCCCTTGGAACAAACTCTCACTTGGACCAATCTC 236
Query 237 CGAGAAGCTCAAACTCGCCGTCTTCTGCAAGTCATGGCCTGTTGGTTCGATCCCCGGAGG 296
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 237 GGAGAAGCTCAAACTCGCTGTCTTCTGCAAGTCATGGCCTGTTGGTTCGATCCCCGGAGG 296
Query 297 AATGGAGCGTCACGCTTACACTCTCTACACTTCTCTCGCGTCAAGAGGTCACGAGATTCA 356
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 297 AATGGAGCGTCATGCTTACACACTCTACACTTCTCTCGCCTCAAGAGGTCACGAGATTCA 356
Query 357 CGTCTTCACGGTTTCTTCCGACAGAAGTAACCGAGAAGAGTACTACAACAGAGGAGATCT 416
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 357 CGTCTTCACGGTTTCTTCCGACAGAAGTAACCGAGAAGAGTACTACAACAAAGGAGATCT 416
Query 417 CCATGTCTACTTCGCTCCAAACGAACACGGCACACTTAACCACTCTCAAGCTTTTGAGAT 476
|||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 417 CCATGTCTACTTTGCTCCAAACGAACACGGCTCACTTAACCACTCTCGAGCTTTTGAGAT 476
Query 477 CTTCCACAAAATCAACGGTCTAGATCATC---CCTTCGATTATGTTCACACTGAGAGTGT 533
|||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||
Sbjct 477 CTTCCATAAAATCAACAGTCTAGATCATCATTCCTTTGATTATGTTCACACTGAGAGTGT 536
Query 534 TTCTCTGCCTCATTGGCGAGTCAAAATGGTGCCTAACGGTGACATAGCTGTGACATGGCA 593
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 537 TTCTCTGCCTCATTGGCGAGTCAAAATGGTGCCTAATGGTGACATAGCTGTGACATGGCA 596
Query 594 CGGAATCTGGTACGAGATCATGCATTCCAATCTTTTCCAAGAACTTTCCAATGATCGTCC 653
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 597 CGGAATCTGGTACGAGATTATGCATTCAAATCTTTTTCAAGAACTTTCCAATGATCGTCC 656
Query 654 TATCTCAGATCTTCAACAAACGATGCCTAGACTCGTCGACGAAATCAGATTCTTCCCAAA 713
|| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 657 TAGCTCTGATCTTCAACAAACGATGCCTAGACTCGTCGATGAAATCAGATTCTTCCCAAA 716
Query 714 ATATAAACAGCATATTTGCATAAGCAACAGTGCGCGTGAGGTTCTAGTTAACATCTATCA 773
||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||
Sbjct 717 ATATAAACAGCATATTTGCATTAGCAACAGCGCGCGCGAGGTACTAGTTAACATCTATCA 776
Query 774 GCTTCCTAAGAGAAATGTTCACGTTATAGTCAACGGTGTTGACCAAACCAAGTTCGTGTA 833
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 ACTTCCTAAGAGAAAAGTTCACGTTATAGTCAACGGTGTTGACCAAACCAAGTTCGTGTA 836
Query 834 TTCCCCTGAATCGGGAGCTAGATTCAGGGTGAAACACGGTGTTCCTGACAATGGGACGTT 893
||| |||||||| |||||||| ||||||| |||||||||| |||||||||||||||| |
Sbjct 837 TTCTCCTGAATCTGGAGCTAGGTTCAGGGCGAAACACGGTATTCCTGACAATGGGACATA 896
Query 894 TATTGTGATGGGTGTGTCTGGACGTTTGGTGAGAGACAAAGGACATCCACTTCTCTATGA 953
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 897 TATTGTGATGGGTGTGTCTGGACGTTTGGTGAGAGACAAAGGACATCCACTTCTATATGA 956
Query 954 AGCTTTTGCTTTGCTCGTTAAAATGCACCCGCAAGTCTATCTGCTTGTGGCTGGATCTGG 1013
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 957 AGCGTTTGCTTTGCTCGTTAAAATGCACCCGAAAGTCTATTTGCTTGTGGCTGGATCTGG 1016
Query 1014 TCCTTGGGGTAAAAGATACGCGGAATTAGGTGAAAACGTTAGGGTTTTAGGAGCTTTAAA 1073
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1017 TCCTTGGGGCAAAAGATACGCGGAATTAGGCGAAAACGTTAGGGTTTTAGGAGCTTTAGA 1076
Query 1074 ACCAGAAGAGCTCTCTGGTTTCTACAACGCGTTAGATGTGTTTGTGAATCCTACATTGAG 1133
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1077 GCCAGAGGAGCTCTCTGGTTTCTACAACGCTTTAGATGTGTTTGTGAATCCGACGTTGAG 1136
Query 1134 ACCGCAAGGGCTTGATTTGACAATCATCGAGGCGATGCAGTGTGTGAAACCTGTAGTGGT 1193
||| || |||||||||||||| ||||| |||||||||||||||| ||||||||| ||||
Sbjct 1137 ACCACAGGGGCTTGATTTGACGATCATTGAGGCGATGCAGTGTGGGAAACCTGTCGTGGC 1196
Query 1194 ACCTAATTATCCAAGCATTGTTGGGACAGTGGTTGTGGATGAGCGTTTTGGGTACACATT 1253
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1197 ACCTAATTATCCAAGCATTGTTGGGACAGTGGTTGTGGACGAGCGTTTTGGGTACACATT 1256
Query 1254 TTCTCCAAATGTGAGATCTCTTGTTGAGACGTTGGATTCTGTTGTAAGAGATGGATCTAT 1313
||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1257 TTCTCCAAACGTGAGATCTCTTGTTGAGACTTTGGATTCTGTTGTAAGAGATGGGCCTAG 1316
Query 1314 TGTTTTGGAGATGAAAGGAATAGCTTGCAAGGTTTACGCTCTTTCAATGTTTACAGCGAC 1373
|||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 1317 GGTTTTGGAGATGAAAGGAATAGCTTGTAAGGGATACGCTCTTTCGATGTTTACAGCGAC 1376
Query 1374 TCGAATGGCTTCGGCTTATGAGAGATTCTTTATGTGTATGAAGAATGA 1421
|| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1377 TCAAATGGCTTCGGCTTATGAGAGATTCTTTATGTGTATGAAAAATGA 1424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73393196790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5