BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg316462
Length=4308
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein | chr1:28261... 4737 0.0
> AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein | chr1:28261004-28266124
FORWARD LENGTH=4347
Length=4347
Score = 4737 bits (2565), Expect = 0.0
Identities = 2997/3202 (94%), Gaps = 44/3202 (1%)
Strand=Plus/Plus
Query 1 ATGGAGTATGAGAAATCTCCCACTGCTACTACTTTCTCTAGGAAGATTAGTGGTAATCGT 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1 ATGGAGTATGAGAAATCTCCCACTGCTACTACTTTCTCTAGGAAGATTAGTAATAATCGT 60
Query 61 AGCCATAGTCTTAGCTTTAGTGCAAATGCCGTTTACGACGGAGTTTTTTCTTCTCCGGCG 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 61 AGCCATAGTCTTAGCTTTAGTGCAAATGCCGTATACGACGGAGTTTTTTCTTCTCCGGTG 120
Query 121 AATTCGAAATCTCCTTTGGTTGATTACGGCGAGATTTTCCGAGGTTCCGGTCCTTCTCCG 180
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 121 AATTCGAAATCTCCTTTAGTTGATTACGGTGAGATTTTCCGAGGTTCAGGTCCTTCTCCG 180
Query 181 TCTTCGATTCCGTTTCTGGATGTCCCGGAGCTGAACGTTGGTAAGGTTAAGGTTGATGTT 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 181 TCTTCGATTCCGTTTCTGGATGTTCCGGAGCTGAACGTTGGTAAGGTTAAGGTCGATGTT 240
Query 241 CGGAGTTCTAAGCTCGATTACTCTTCCGTGTTTGGAGGCTTTGGAGCTTGCGATTTCGCT 300
|||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||
Sbjct 241 CGGAGTTCTAAGCTCGATTACTCTTCGGTGTTTGGTGGCTTAGGAGCTTGCGATTTTGCT 300
Query 301 GTTACTCCTAAGGAAGTGATCATCAAGTCCGAGAAGAAAACCGCCGTT-ACTGAGGATAA 359
|||||||||||||| ||||||||||||||||||||||||||| || || || ||||||||
Sbjct 301 GTTACTCCTAAGGAGGTGATCATCAAGTCCGAGAAGAAAACCTCCATTAAC-GAGGATAA 359
Query 360 GAAAAGGAATCGTAGGAAAGGTGGAAATTCTTCTGATGTTCCTCTTTGCAACGAGGGGAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GAAAAGGAATCGTAGGAAAGGTGGAAATTCTTCTGATGTTCCTCTTTGCAACGAGGGGAA 419
Query 420 AAAATCACCTGAAATGGTTAAGATGAAGCACTCTGATATATTACATCACCAGACGGTTCC 479
|||||||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||
Sbjct 420 AAAATCACCTGAAATGGTTAGGATGAAGCACTCTGATATATCATATCACCAGACGGTCCC 479
Query 480 TCGAAATGAGAATGGGACTACTCATCTTACTCAGGT-CCT-C-ACTATGCCTGGTCCTAG 536
||| |||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||
Sbjct 480 TCGTAATGAGAATGGGGCTACTCATCTTACTCAGGTCCCTGCTACTATGCCTGGTCCTAT 539
Query 537 TCCGACTCAAGCGGTTGATAATACGAGTTTGTTGCAGAAGATTGAAAGT-AA--AACTCC 593
||||||||||| |||||||||||||||||||||||| |||||||||||| || ||||||
Sbjct 540 TCCGACTCAAGTGGTTGATAATACGAGTTTGTTGCACAAGATTGAAAGTAAATCAACTCC 599
Query 594 TATTCCAACAGTTGAGAAGAAACTGCCATGTAGCGAGGGTCATGAGGAAGTCAAGGCTTC 653
||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct 600 TATTCCAGCAGTTGAGAAGAAGCTGCCATGTAACGAGGGTCGTGAGGAAGTCAAGGCTTC 659
Query 654 TAGAAAGCGGGGTTCTAAAACTGAGGTCGATTTCGAGAACATTTTTGCTCGAAATGGATG 713
|||||||| ||| |||||||||||||| ||||| |||||||||||||||||| |||||||
Sbjct 660 TAGAAAGCAGGGATCTAAAACTGAGGTTGATTTTGAGAACATTTTTGCTCGAGATGGATG 719
Query 714 CAGTACGCATGATAACTCCACGTCCAAGACCGATTCTAACGGTGGACATC---A-G-G-- 766
|||||||| |||| ||||||||| ||||||| |||||| |||| | ||| | | |
Sbjct 720 CAGTACGCGTGATGACTCCACGTGTAAGACCGTTTCTAATGGTGAATATCGGGATGTGAA 779
Query 767 A--TCC-T--A-C-TT---TG------G-ATGGTGAAAATGGAGCTTCCGAAAGATTATC 809
| || | | | || || | |||||||| |||||||||| ||||| |||||
Sbjct 780 ACCGCCTTCAAGCTTTCAGTGTACATTGAATGGTGAACATGGAGCTTCTGAAAGGTTATC 839
Query 810 AGGTTTAGATTCTGGGCCTTCAGAAAGGTTTCAAACTGAAGATGCTGATTCTCCAAGTTC 869
|||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||
Sbjct 840 GGGTTTAAATTCTGGGCCTTCGGAAAGGTATGAAACTGAAGATGCTGATTCTCCAAGTTC 899
Query 870 ACCTCCATACTTCGATGCTGAAACAGATGCAAATTCGGCTGCCGCTGAGTCTTCTGCAGC 929
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 900 ACCTCCATACTTCGATGCTGAAACAGATGAAAATTCGGTTGCCGCTGAGTCTTCTGCAGC 959
Query 930 ACTGAAAAAGGCTATAGATGAGGCACAAATAAGAATGAATATTGCAAAACAAATGATGGA 989
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 960 ACTGAAAAAGGCTATAGAAGAGGCTCAAATAAGAATGAATATTGCAAAACAAATGATGGA 1019
Query 990 TAGGAAAAAGTCAGGCTTTCGCAGTTGTGCAAAACTGAAATCTTGTGATGACCCTAAAAT 1049
| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1020 AAAGAAAAAGTCCGGCTTTCGCAGTTGTGCAAAACTGAAATCTTGTGATGACTCTAAAAT 1079
Query 1050 TGAGAATAAAGGGGACACAAAGGTTGAAGGAATTACAGAAGAAAGCAGATACAACCATTC 1109
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1080 TGAGAATAAAGGGAACACAAAGGTTGAAGGAATTACAGAAGAAAGCAGAGACAACAATTC 1139
Query 1110 CCAGATTCTCGGTGAAATGGTGAAATCTTCTAAACAATCATTTTCAAACGAGGGAGATCA 1169
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1140 TCAGATTCTCGGTGAAATGGTGAAACCTTCTGAACAATCATTTTCAAACGAGGGAGATCA 1199
Query 1170 GCATGCTAAAAGAGCGCGGAAGCTGTGGGGAGTTCCTGAAGGACTTTTAAAATCAACTTC 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 GCATGCTAAAAGAGCGCGGAAGCTGTGGGGAGTTCCTGAAGGACTTTTAAAATCAACTTC 1259
Query 1230 AGACCATAAGCCAGAAGAGTTAGACGAGCAAGATGTGATAAAGCAAGAAGAGGAACAAGA 1289
|||||||||||||||||||||||| ||||||||| | |||| || ||||||||||||||
Sbjct 1260 AGACCATAAGCCAGAAGAGTTAGAAGAGCAAGATATCATAACGCTAGAAGAGGAACAAGC 1319
Query 1290 AAGAAGAGGTCGAAAACACTGGGAATTACCCGGAGGGATATTCAAATCAGTTATGAATAG 1349
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1320 ACGAAGAGGTCGAAAACACTGGGAATTACCTGGAGGGATATTCAAATCAGTTATGAATAG 1379
Query 1350 TAAGCAGCAAGAGCCAGAAAACCTTGCACCAGCCAAACCTGAAACTGATACGAAACAAGA 1409
||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1380 TAAGCAGCAGGAGCCAGAAAACCTTGCACCAGCTAAACCTGAACCTGATACGAAACAAGA 1439
Query 1410 GGTGCAACCATTAACTGAGAATCCCTTCTATACATTCGGACAGCTTGGCAGTAAAATAAA 1469
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1440 GGTGCAACCAATAACTGAGAATCCCTTCTATACATTTGGACAGCTTGGCAGTAAATTAAA 1499
Query 1470 GTGTGTTGTTGTAGAGGCTTTCACGGGGAGCAAGGCTTCACAAAAAGATGAGAAACAGGT 1529
||||||||| |||||| |||||||||||||| | ||||||||| |||||||||||| |
Sbjct 1500 GTGTGTTGT---AGAGGCCTTCACGGGGAGCAAAGTTTCACAAAAGGATGAGAAACAGTT 1556
Query 1530 TACAGAGAAGGAAAACTCTATCC-TCACTCAAATGGTTCAAGGTGAGGAAAGTGACTCAA 1588
||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||
Sbjct 1557 TACAGAGAAGGAAAATTCTA-CCGTCACTCAAATGGTTCAAGATGAGGAAAGTGACTCAC 1615
Query 1589 AAGAGATGCTAGCTGGTATTCCAGTCATGGAAACATACTTAAGGGAAGTGGAAGAGACCC 1648
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1616 AAGAGATGCTAGCTGGTATTCCAGTCATAGAAACATACTTAAGGGAAGTGGAAGAGACCC 1675
Query 1649 CGCAACAAACTGAGAGTAAGAGCGAAATTAATATTGAAGAGAAGTCTGAATCTACAATAT 1708
| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct 1676 CACAACAAACTGAGAGTAAGAGCGAAATGAATATTGAAGAGAAGTCTGAATCAACCATAT 1735
Query 1709 GTACTTTCACAGAAGGGTCTTCTCAGAGTATGGAGAAAGAAACAGGATGTCACGTTAAAA 1768
|| ||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||
Sbjct 1736 GTGCTTTCACAGAAAGGTCTTCTCAGAATATGGAGAAAGAAACAGGATGGCAAGTTAAAA 1795
Query 1769 GTGCTTGTGAGTCCGAGGGTGGATCTGGCGTAAAAGATTTCCAAGAAAATTCTGACCAAA 1828
||||||| ||| ||| | ||||||||| ||||||||||||||||||||| |||||| |
Sbjct 1796 GTGCTTGCAAGTTCGAAGATGGATCTGGGGTAAAAGATTTCCAAGAAAATGGTGACCACA 1855
Query 1829 CTTGCAATGTTGTAGATCAGGAAAGTGAGAAGGAGATACTCTCTGAGCCACAAGAGATGT 1888
||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 1856 CTTGCAATGTTCTAGATCAGGAAGGTGAGAAGGAGATAGTCTCTGAGCCACAGGAGATGT 1915
Query 1889 TAGTTGGTCCTGATGATACCAAAACATATGTAAGGGAAGTGGAAGGAATCCCAACACCGA 1948
||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||
Sbjct 1916 TAGTTGGTCCTGATGATTCCAAAACATATGTAAGGGAAGTGGAAGAAACCCCAACACCGA 1975
Query 1949 GTTTGAATAAAACTCAGTCCGATGATAGTGTTGGAGCTATGGTGTCTTTTAACAGAG-AA 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1976 GTTTGAATAAAACTCAGTCCGATGATAGTGTTGGAGCTATGGTGTCTTTTAACAGAGTAA 2035
Query 2008 ATTATTTCTGAGCCAGGAAACGTAGATGAGGTGCAAGAGACAGTGCACAAGGTTCCCAGA 2067
|| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 2036 AT-ATTTCTGAGCCAGGAAACATAGATGAGGTGCAAGAGGCAGTGCACAAGGTTCCCAGG 2094
Query 2068 CGAAGAAGAGTTTGGAAGACCTCTGAAGACGTCTATAATATGATAAAGGCCCCGAAGGGA 2127
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2095 CGAAGAAGAGTTTGGAAGACCTCTGAAGACGTCTATAATATGATAAAGGCTCCGAAGGGA 2154
Query 2128 AACAACAGGCCCTGGCAGCTAGAAAGTGCGGAAAATGAAACCACAGCGATGTCCTTTCAT 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 AACAACAGGCCCTGGCAGCTAGAAAGTGCGGAAAATGAAACCACAGCGATGTCCTTTCAT 2214
Query 2188 GAAGAAGGTGTAAGGATCAATCATGCTAGCGAGGAAACAGAAAGCACATCTGGACAAGCG 2247
|| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 2215 GAGGAAGGTGTAAGGATCCATCATGCTAGCGAGGAAATAGAAAGCACATCTGGACAAGCT 2274
Query 2248 AGTGATTCTGGATTGCAAGAAAATTGGACCGTACTTAAACAGATGTTTAGGCAGATGTTT 2307
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2275 AGTGATTCAGGATTGCAAGAAAATTGGACCGTTCTTAAACAGATGTTTAGGCAGATGTTT 2334
Query 2308 CAGACAGCAGATACTAAGGGAGAGGATGAAACTTACTGCTTAGTGGAATCTGAAAAGGGG 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2335 CAGACAGCAGATACTAAGGGAGAGGATGAAACTTACTGCTTAGTGGAATCTGAAA-GGGG 2393
Query 2368 -CATCTTGATATCCATCGAAAAGCTCAAGAGAAATATCAACAGGATGAGGTGGAGACAGT 2426
|||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||
Sbjct 2394 ACATCTTGATATCCATCAAAAAGCTCAAGAAAAATATGAACAGGTTGAGGTGGAGACAGT 2453
Query 2427 AAGAACGAATTATGAAGACTATGCACATACCAGAGAAAATGAAGACTTGGAATCGGTACA 2486
||||||||||||||||| ||||||||||||||||||||||||||| | | | |||| |||
Sbjct 2454 AAGAACGAATTATGAAGCCTATGCACATACCAGAGAAAATGAAGA-T-G-AGTCGGCACA 2510
Query 2487 AGAAACATATTGTAGAAAAGAGGATGGTAAGGTAGAAGTGCAAGGTAAAACGTCTTTGGT 2546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2511 AGAAACATATTGTAGAAAAGAGGATGGTAAGGTAGAAGTGCAAGGTAAAACGTCTTTGGT 2570
Query 2547 CCGTGAACTGATAGGAGAAGAGCTAGAAATGGCTAGCCTAGAAGAGGAAGATGTGCAGGA 2606
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2571 CCGTGAACTGATAGGAGAAGAACTAGAAATGGCTAGCCTAGAAGAAGAAGATGTGCAGGA 2630
Query 2607 AGAATCTGAAGAAGCTGGCTGGGTTCAAAGACTTTCTGAACTTAATGATATAAAGGAGCA 2666
|| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||
Sbjct 2631 AGCATCTGAAGAAGCTGGCTGGGTTCAAGGACTTTCTGAACTTAATGAGATAAATGAGCA 2690
Query 2667 TGCAGATTCTCATGCTGAAATGCTTGAATACGTTCGAAGTGAAACAGATTCAAATAATTC 2726
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 2691 TGCAGATTCTCATGCTGAAATGCTTGAATATGATCGAAGTGAAACAGATTCAAATAATTC 2750
Query 2727 TGGGGAGAGATTTGAGCAAACACAGGAACAAGCCGAAGAAACTAAGATCGATGGTAGTAT 2786
| ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 2751 TAGGGAGAGATTTGATCAAACACAGGAACAAGCAGAAGAAACTATGATCGATGGTAGTAT 2810
Query 2787 AGATACTGACACCAGCAGGTCATCTTTTGAAATGAGGCAAGGTGGTTCATACATTGAGGA 2846
|||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||
Sbjct 2811 AGATACTGACACCAGCAGGTCATCTTTTGAAATGAGACAAGGTGATTCATATATTGAGGA 2870
Query 2847 GGTTGGCATTGAGCAAGATCTCAGTGATCAATTCCCTGAAAAAGCCAGTGCTGTCAGTAG 2906
|||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2871 GGTTGGCATTGAGCAACATCGCAGTGATCAATTCCCTGAAAAAGCTAGTGCTGTCAGTAA 2930
Query 2907 CACGGGAGAAAACATTGAAGAAATAGATTCTGATTCGATTCAAAGTGGTTGGAGTGTTGT 2966
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2931 CACGGAAGAACACATTGAAGAAATAGATTCTGATTCGATTCAAAGTGGTTGGAGTGTTGT 2990
Query 2967 AGAGGATGACGACAGATCACTGCAGGATGGAGTGGCAAGTCAGGCAGAAAGTAAGCCTGA 3026
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2991 AGAGGATGACGACAGATCACTGCAGGATGGAGGGGCAAGTCAGGCAGAAAGTAAGCATGA 3050
Query 3027 CGAATTGGAGGAAACCAAAGAAGAAAGTGATGAAATAAAAACAACTCTTGGTGTAGGGAG 3086
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct 3051 CGAATTGGAGGAAACCAAAGAAGAAAGTGATGAAATGAAAACAAGTCTTGGTGTAGAGAG 3110
Query 3087 AAATGGAGATAAGACAGAACTAGAGCACCGGTTTGAGTGTCAAGAGAATGAAACGGATAG 3146
|||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 3111 AAATGGAGATAAGAAAGAACTAGAGCACCAGTTTGAGTGTCAAGAGAATGAAACATATAG 3170
Query 3147 AAGCAATGTGGAGGCAGCAGAG 3168
|||||||||||||||||| |||
Sbjct 3171 AAGCAATGTGGAGGCAGCTGAG 3192
Score = 1727 bits (935), Expect = 0.0
Identities = 1036/1084 (96%), Gaps = 9/1084 (1%)
Strand=Plus/Plus
Query 3225 GGGAGAGGAGAGTTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATTGG 3284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3273 GGGAGAGGAGAGTTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATTGG 3332
Query 3285 CGCAGCAACAGATGGAAACATGAAAGAAAATGAGGGAGAGGAGAGTTGTCGATCATCTAT 3344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3333 CGCAGCAACAGATGGAAACATGAAAGAAAATGAGGGAGAGGAGAGTTGTCGATCATCTAT 3392
Query 3345 GGAAGAAGAGGGAGATGCTACTTCTGATATTTCACAAAACAAAGCAGAGACAGTTGAGGA 3404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3393 GGAAGAAGAGGGAGATGCTACTTCTGATATTTCACAAAACAAAGCAGAGACAGTTGAGGA 3452
Query 3405 ACATCTgaaaaagaaagatcaaacaagggagaaagagagagaaagagagaaagagagaTT 3464
|||||||||||||| |||| ||||||| |||||||||||||||||| || |||||||| |
Sbjct 3453 ACATCTGAAAAAGATAGATGAAACAAGAGAGAAAGAGAGAGAAAGAAAGCAAGAGAGAGT 3512
Query 3465 TATGGTAGAAAGAGCGATTCGTGAAGCCCGCGAAAGGGCATTTGCTGATGCTAGGGAAAG 3524
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3513 TATGGTAGAAAGAGCTATTCGTGAAGCCCGCGAAAGGGCATTTGCTGATGCTATGGAAAG 3572
Query 3525 GGCAGGGAAAGCTGCACTGGAGAAGGCAAAGGCAGGAGCCCACCGTAAAGGGACTTCTGA 3584
||||| ||| ||||| |||||||||||||||||| |||||||||| | || ||
Sbjct 3573 AGCAGGAAAAACTGCAATGGAGAAGGCAAAGGCAGTAGCCCACCGT--A--GA-----GA 3623
Query 3585 GGTTCCAAGGAGATCAGAGAAGGGATCTGTTGAGGTAAATGATAAGTTATCATCAGCTGA 3644
||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 3624 GGTTCCAAGGAAATCAGAAAAGGGATCTGTTGAGGTAAACGATAAGTTATCATCAGCTGA 3683
Query 3645 GAAAGCTTCAATGCAAGCCAAACTCAGAGCAGAGCGTGCTGCTGTAGAAAGAGCACTCAC 3704
||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct 3684 GAAGGCTTCAATGCAAGCCAAACTCAGAGCTGAGCGTGCTGCTGTAGAACGAGCAATCAC 3743
Query 3705 TGAGGCCAGAGAACGTGCCATGGAAAAAGCATTGTCTGGTAAGTCTGCTGCTTCTCAAAC 3764
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3744 TGAGGTCAGAGAACGTGCCATGGAAAAAGCATTGTCTGGTAAGTCTGCTGCTTCTCAAGC 3803
Query 3765 AAAAAGTTATGGCGGCAGCAAGTCATTTAGCTCTTCTGGTGAAAGACGAGGCTCCTCATC 3824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3804 AAAAAGTTATGGCGGCAGCAAGTCATTTAGCTCTTCTGGTGAAAGACGAGGCTCCTCATC 3863
Query 3825 TTCTGGTGCGGAGAACAAAAGTTCAGGTCCTTCCAATTCTTCAAACCAGACTGGAGAGTC 3884
||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 3864 TTCTGGTACGGAGAACAAAAGTTCAGGTCCTTCCAATTCTTCAAACCAGACTGGTGAACC 3923
Query 3885 AATCCAGAGATGTAAAGCTAGATCTGAGAGACACCAGAGAACATCTGACCGCGCGGCAGA 3944
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3924 AATCCAGAGATGTAAAGCTAGATCTGAGAGACACCAGAGAACATCTGACCGCGCAGCAGA 3983
Query 3945 GGCTCTTGCAGAGAAGAAACTTCGTGATCTTAAAGCTCAGAAAGAGCAGACAGAGAGAAA 4004
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 3984 GGCTCTTGCAGAGAAGAAACTTCGTGATCTTAAAACCCAGAAAGAGCAGACAGAGAGAAA 4043
Query 4005 TAGACTCGCGGAAGCTCTTGATGCTGATGTCAAACGGTGGTCGAGTGGAAAGGAAAACAA 4064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4044 TAGACTCGCGGAAGCTCTTGATGCTGATGTCAAACGGTGGTCGAGTGGAAAGGAAAACAA 4103
Query 4065 CTTACGGGCGTTGCTCTCAACACTCCAATATATACTTGGAGGAGAGAGTGGATGGAAACC 4124
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 4104 CTTACGGGCGTTGATCTCAACACTCCAATATATACTTGGAGCAGAGAGTGGATGGAAACC 4163
Query 4125 GATTCCTCTCACTGATCTTGTCTCAAGTGCTTCTGTGAGAAAAACCTACCGAAAGGCAAC 4184
||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||
Sbjct 4164 GATTCCTCTCACTGATCTTGTCTCAAGCGCTTCTGTGAGAAAAGCCTACCGCAAGGCAAC 4223
Query 4185 TCTTTACGTCCATCCTGACAAGCTTCAACAACGTGGTGCATCCACACAGCAGAAGTACAT 4244
|||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4224 TCTTTATGTTCATCCCGACAAGCTTCAACAACGTGGCGCATCCACACAGCAGAAGTACAT 4283
Query 4245 TTGTGAGAAAGTTTTTGACCTTCTCAAGGAAGCATGGAACAAATTTGGTGCAGACGAACG 4304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4284 TTGTGAGAAAGTTTTTGACCTTCTCAAGGAAGCATGGAACAAATTTGGTGCTGACGAACG 4343
Query 4305 ATAA 4308
||||
Sbjct 4344 ATAA 4347
Score = 132 bits (71), Expect = 3e-29
Identities = 96/106 (91%), Gaps = 9/106 (8%)
Strand=Plus/Plus
Query 3279 TATTGGCGCAGCAACAGATGGAAACATGAAAGAAAAT---------GAGGGAGAGGAGAG 3329
|||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 3225 TATTGGCGCAGCAACAAATGGAAACATGAAAGAAAATGAGGGAGAGGAGGGAGAGGAGAG 3284
Query 3330 TTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATT 3375
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3285 TTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATT 3330
Score = 108 bits (58), Expect = 6e-22
Identities = 58/58 (100%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 3225 GGGAGAGGAGAGTTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATT 3282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3366 GGGAGAGGAGAGTTGTCGATCATCTATGGAAGAAGAGGGAGATGCTACTTCTGATATT 3423
Score = 97.1 bits (52), Expect = 1e-18
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 3162 AGCAGAGACAGTTGAGGAACATCTGAAAAAGAAAGATGAAACAAGGGAGAAAGAGAGA 3219
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 3435 AGCAGAGACAGTTGAGGAACATCTGAAAAAGATAGATGAAACAAGAGAGAAAGAGAGA 3492
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 214764682983
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5