BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg316589

Length=1578
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G76710.1 | Symbols: SDG26 | SET domain group 26 | chr1:28789...  1814    0.0  


> AT1G76710.1 | Symbols: SDG26 | SET domain group 26 | chr1:28789729-28792676 
REVERSE LENGTH=1751
Length=1751

 Score = 1814 bits (982),  Expect = 0.0
 Identities = 1155/1232 (94%), Gaps = 38/1232 (3%)
 Strand=Plus/Plus

Query  1     ATGCAGTTTTCTTGTGATCCTGATCAAGAAGGAGATGAGCTGCCACAGTATGAACACATT  60
             ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  115   ATGCAATTTTCTTGTGATCCTGATCAAGAAGGAGATGAGCTGCCACAATATGAACACATT  174

Query  61    TATCAAAATGACTTCTCATATCGAAAGCACAAGAAACAGAAGGAAGAAGATATTTCTATC  120
             ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct  175   TATCAAAATGACTTCTCTTATCGAAAGCACAAGAAACAAAAGGAAGAAGATATATCTATC  234

Query  121   TGCGAATGCAAGTTTGATTTTGGAGACCCTGACAGTGCTTGTGGTGAGAGATGCCTCAAT  180
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  235   TGCGAATGCAAGTTTGATTTCGGAGACCCTGACAGTGCTTGTGGTGAGAGATGCCTCAAT  294

Query  181   GTCATTACCAACACCGAATGTACTCCTGGATACTGCCCCTGTGGTGTCTATTGCAAGAAT  240
             |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  295   GTCATTACCAACACTGAATGTACTCCTGGTTACTGCCCCTGTGGTGTCTATTGCAAGAAT  354

Query  241   CAGAAGTTCCAAAAATGTGAATACGCCAAAACAAAGTTGATCAAGTGTGAAGGTCGCGGT  300
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  355   CAGAAGTTCCAAAAATGTGAATACGCCAAAACAAAGTTGATCAAGTGTGAAGGTCGTGGT  414

Query  301   TGGGGACTAGTGGCTCTTGAAGACATAAAGGCGGGACAGTTTATAATTGAGTACTGTGGC  360
             ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| 
Sbjct  415   TGGGGACTAGTGGCTCTTGAAGAGATAAAGGCGGGGCAATTTATAATGGAGTACTGTGGT  474

Query  361   GAAGTAATATCATGGAAAGAAGCAAAG-CGTAGGGCTCAAACTTATGAAACTCATGGTGT  419
             |||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||
Sbjct  475   GAAGTAATATCATGGAAAGAAGCAAAGAAG-AGGGCTCAAACTTATGAAACTCATGGTGT  533

Query  420   CAAGGATGCATACATTATATCTCTCAATGCGTCTGAGGCTATTGATGCCACTAAGAAGGG  479
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  534   CAAGGATGCATACATTATATCTCTCAATGCATCTGAGGCTATTGATGCCACTAAGAAGGG  593

Query  480   AAGCCTTGCTAGGTTTATAAATCATTCATGTAGACCAAATTGTGAGACGAGGAAGTGGAA  539
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  594   AAGCCTTGCTAGGTTTATAAATCATTCATGTAGACCAAATTGTGAGACGAGGAAGTGGAA  653

Query  540   TGTACTGGGAGAAGTTAGGGTTGGAATCTTTGCAAAAGAGAGCATCTCTCCCCGGACCGA  599
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  654   TGTACTGGGAGAAGTTAGGGTTGGGATCTTTGCAAAAGAGAGCATCTCTCCCCGGACCGA  713

Query  600   ATTGGCCTACGACTATAATTTTGAATGGTATGGTGGTGCCAAAGTCCGTTGTCTCTGTGG  659
             |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct  714   ATTGGCTTACGACTATAATTTTGAATGGTACGGTGGTGCCAAAGTGCGTTGTCTCTGTGG  773

Query  660   TGCAGTCGCATGTTCTGGATTTCTTGGAGCCAAGTCTCGTGGCTTTCAGGCAAGTCCTTA  719
             ||| || ||||| ||||||||||||||||||||||||||||||||||||| | |     |
Sbjct  774   TGCGGTTGCATGCTCTGGATTTCTTGGAGCCAAGTCTCGTGGCTTTCAGG-AGG-----A  827

Query  720   CATTATCATCCTAATAGAGGATACATATGTATGGGAGGATGGTGATGATCGGTATTCAGT  779
               | | |||   | | |    ||  |  |   || |||||||||| ||||||||||||||
Sbjct  828   --T-A-CAT---A-T-G----TA--T--G---GG-AGGATGGTGACGATCGGTATTCAGT  866

Query  780   TGATAAAATTCCAGTCTATGATTCTGCAGAGGACGAGCTTACATCTGAGCCCTCTAAGAA  839
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  867   TGATAAAATTCCAGTCTATGATTCTGCAGAGGACGAGCTTACATCTGAGCCTTCTAAGAA  926

Query  840   TGACGAGTCCAACACAAATGAAGAGAAAGAGAAAGATATCTCAACAGAGAACCATTTGGA  899
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  927   TGGCGAGTCCAACACAAATGAAGAGAAAGAGAAAGATATCTCAACAGAGAACCATTTGGA  986

Query  900   GTCTACTGCTCTGACTGTTCA---GCAATCAGATTCAAC---A-C-C-TATGGAGGAAGA  950
             |||||||||||||| | ||||   |||||||||||||||   | | | ||||||||||||
Sbjct  987   GTCTACTGCTCTGAATATTCAACAGCAATCAGATTCAACTCCAACTCCTATGGAGGAAGA  1046

Query  951   TGTTGTCACGGAGACTGTTAAAACCGAAACAGCTGAAGACATGAAGCTGCTCTCACAAAA  1010
             ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  1047  TGTCGTCACGGAGACTGTTAAAACCGAAACATCTGAAGACATGAAGCTGCTCTCACAAAA  1106

Query  1011  TTCACAAGAAGATTCATCGCCGAAGACTGCAATTGTATCACGGGTTCGCGGTAACATTTA  1070
             ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| 
Sbjct  1107  TTCACAAGAAGATTCATCGCCAAAGACTGCAATTGTATCACGGGTTCACGGTAACATTTC  1166

Query  1071  CAAAATTAAGTCTGAATCTCTTCCGAAGAAAAGAGGCAGGCCGTTTTCAGGCGGGAAAAC  1130
             ||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  1167  CAAGATCAAGTCCGAATCTCTTCCGAAGAAAAGAGGCAGGCCGTTTTCAGGCGGAAAAAC  1226

Query  1131  AAAGAATGTCGCCCAGAAGCATGTTGACATAGCGAATGTGGTTCAGCTACTAGCAACCAA  1190
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1227  AAAGAATGTCGCTCAGAAGCATGTTGACATAGCGAATGTGGTTCAGCTACTAGCAACCAA  1286

Query  1191  AGAAGCTCAAGATGAAGTTCTCAAATACGAGG  1222
             ||||||||||||||||||||||||||||||||
Sbjct  1287  AGAAGCTCAAGATGAAGTTCTCAAATACGAGG  1318


 Score =  481 bits (260),  Expect = 1e-134
 Identities = 272/278 (98%), Gaps = 0/278 (0%)
 Strand=Plus/Plus

Query  1301  AGGAGGTGAAGAAGGAGGCAGCAGTACGACTCTCGTCATTGTACGATGAGATAAGGCCAG  1360
             |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct  1316  AGGAGGTGAAGAAGGAAGCAGCAGTACGACTCTCGTCATTGTACGACGAGATAAGGCCGG  1375

Query  1361  CGATTGAGGAGCATGAGAGAGATAGCCAAGACAGTGTAGCAACAAGTGTGGCGGAGAAAT  1420
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  1376  CGATTGAGGAGCATGAAAGAGATAGCCAAGACAGTGTAGCAACAAGTGTGGCGGAGAAAT  1435

Query  1421  GGATACAAGCAAGCTGTAATAAACTAAAGGCAGAGTTTGATCTTTACTCTAGTGTAATAA  1480
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  1436  GGATACAAGCAAGCTGTAATAAACTCAAGGCAGAGTTTGATCTTTACTCTAGTGTAATAA  1495

Query  1481  AGAACATCGCTTCCACTCCCATCAAACCACAAGACACAAAGACCAAAGTCGCGGAGGCAG  1540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  1496  AGAACATCGCTTCCACTCCCATCAAACCACAAGACACAAAGACCAAAGTCGCGGAAGCAG  1555

Query  1541  GAAACGAAGACCATATTAAACTCTTGGAAGCCAAATGA  1578
             ||||||||||||||||||||||||||||||||||||||
Sbjct  1556  GAAACGAAGACCATATTAAACTCTTGGAAGCCAAATGA  1593



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 77911245840


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5