BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316589 Length=1578 Score E Sequences producing significant alignments: (Bits) Value AT1G76710.1 | Symbols: SDG26 | SET domain group 26 | chr1:28789... 1814 0.0 > AT1G76710.1 | Symbols: SDG26 | SET domain group 26 | chr1:28789729-28792676 REVERSE LENGTH=1751 Length=1751 Score = 1814 bits (982), Expect = 0.0 Identities = 1155/1232 (94%), Gaps = 38/1232 (3%) Strand=Plus/Plus Query 1 ATGCAGTTTTCTTGTGATCCTGATCAAGAAGGAGATGAGCTGCCACAGTATGAACACATT 60 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 115 ATGCAATTTTCTTGTGATCCTGATCAAGAAGGAGATGAGCTGCCACAATATGAACACATT 174 Query 61 TATCAAAATGACTTCTCATATCGAAAGCACAAGAAACAGAAGGAAGAAGATATTTCTATC 120 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct 175 TATCAAAATGACTTCTCTTATCGAAAGCACAAGAAACAAAAGGAAGAAGATATATCTATC 234 Query 121 TGCGAATGCAAGTTTGATTTTGGAGACCCTGACAGTGCTTGTGGTGAGAGATGCCTCAAT 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 235 TGCGAATGCAAGTTTGATTTCGGAGACCCTGACAGTGCTTGTGGTGAGAGATGCCTCAAT 294 Query 181 GTCATTACCAACACCGAATGTACTCCTGGATACTGCCCCTGTGGTGTCTATTGCAAGAAT 240 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 295 GTCATTACCAACACTGAATGTACTCCTGGTTACTGCCCCTGTGGTGTCTATTGCAAGAAT 354 Query 241 CAGAAGTTCCAAAAATGTGAATACGCCAAAACAAAGTTGATCAAGTGTGAAGGTCGCGGT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 355 CAGAAGTTCCAAAAATGTGAATACGCCAAAACAAAGTTGATCAAGTGTGAAGGTCGTGGT 414 Query 301 TGGGGACTAGTGGCTCTTGAAGACATAAAGGCGGGACAGTTTATAATTGAGTACTGTGGC 360 ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| Sbjct 415 TGGGGACTAGTGGCTCTTGAAGAGATAAAGGCGGGGCAATTTATAATGGAGTACTGTGGT 474 Query 361 GAAGTAATATCATGGAAAGAAGCAAAG-CGTAGGGCTCAAACTTATGAAACTCATGGTGT 419 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 475 GAAGTAATATCATGGAAAGAAGCAAAGAAG-AGGGCTCAAACTTATGAAACTCATGGTGT 533 Query 420 CAAGGATGCATACATTATATCTCTCAATGCGTCTGAGGCTATTGATGCCACTAAGAAGGG 479 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 534 CAAGGATGCATACATTATATCTCTCAATGCATCTGAGGCTATTGATGCCACTAAGAAGGG 593 Query 480 AAGCCTTGCTAGGTTTATAAATCATTCATGTAGACCAAATTGTGAGACGAGGAAGTGGAA 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 594 AAGCCTTGCTAGGTTTATAAATCATTCATGTAGACCAAATTGTGAGACGAGGAAGTGGAA 653 Query 540 TGTACTGGGAGAAGTTAGGGTTGGAATCTTTGCAAAAGAGAGCATCTCTCCCCGGACCGA 599 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 654 TGTACTGGGAGAAGTTAGGGTTGGGATCTTTGCAAAAGAGAGCATCTCTCCCCGGACCGA 713 Query 600 ATTGGCCTACGACTATAATTTTGAATGGTATGGTGGTGCCAAAGTCCGTTGTCTCTGTGG 659 |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 714 ATTGGCTTACGACTATAATTTTGAATGGTACGGTGGTGCCAAAGTGCGTTGTCTCTGTGG 773 Query 660 TGCAGTCGCATGTTCTGGATTTCTTGGAGCCAAGTCTCGTGGCTTTCAGGCAAGTCCTTA 719 ||| || ||||| ||||||||||||||||||||||||||||||||||||| | | | Sbjct 774 TGCGGTTGCATGCTCTGGATTTCTTGGAGCCAAGTCTCGTGGCTTTCAGG-AGG-----A 827 Query 720 CATTATCATCCTAATAGAGGATACATATGTATGGGAGGATGGTGATGATCGGTATTCAGT 779 | | ||| | | | || | | || |||||||||| |||||||||||||| Sbjct 828 --T-A-CAT---A-T-G----TA--T--G---GG-AGGATGGTGACGATCGGTATTCAGT 866 Query 780 TGATAAAATTCCAGTCTATGATTCTGCAGAGGACGAGCTTACATCTGAGCCCTCTAAGAA 839 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 867 TGATAAAATTCCAGTCTATGATTCTGCAGAGGACGAGCTTACATCTGAGCCTTCTAAGAA 926 Query 840 TGACGAGTCCAACACAAATGAAGAGAAAGAGAAAGATATCTCAACAGAGAACCATTTGGA 899 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 927 TGGCGAGTCCAACACAAATGAAGAGAAAGAGAAAGATATCTCAACAGAGAACCATTTGGA 986 Query 900 GTCTACTGCTCTGACTGTTCA---GCAATCAGATTCAAC---A-C-C-TATGGAGGAAGA 950 |||||||||||||| | |||| ||||||||||||||| | | | |||||||||||| Sbjct 987 GTCTACTGCTCTGAATATTCAACAGCAATCAGATTCAACTCCAACTCCTATGGAGGAAGA 1046 Query 951 TGTTGTCACGGAGACTGTTAAAACCGAAACAGCTGAAGACATGAAGCTGCTCTCACAAAA 1010 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1047 TGTCGTCACGGAGACTGTTAAAACCGAAACATCTGAAGACATGAAGCTGCTCTCACAAAA 1106 Query 1011 TTCACAAGAAGATTCATCGCCGAAGACTGCAATTGTATCACGGGTTCGCGGTAACATTTA 1070 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 1107 TTCACAAGAAGATTCATCGCCAAAGACTGCAATTGTATCACGGGTTCACGGTAACATTTC 1166 Query 1071 CAAAATTAAGTCTGAATCTCTTCCGAAGAAAAGAGGCAGGCCGTTTTCAGGCGGGAAAAC 1130 ||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1167 CAAGATCAAGTCCGAATCTCTTCCGAAGAAAAGAGGCAGGCCGTTTTCAGGCGGAAAAAC 1226 Query 1131 AAAGAATGTCGCCCAGAAGCATGTTGACATAGCGAATGTGGTTCAGCTACTAGCAACCAA 1190 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1227 AAAGAATGTCGCTCAGAAGCATGTTGACATAGCGAATGTGGTTCAGCTACTAGCAACCAA 1286 Query 1191 AGAAGCTCAAGATGAAGTTCTCAAATACGAGG 1222 |||||||||||||||||||||||||||||||| Sbjct 1287 AGAAGCTCAAGATGAAGTTCTCAAATACGAGG 1318 Score = 481 bits (260), Expect = 1e-134 Identities = 272/278 (98%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1301 AGGAGGTGAAGAAGGAGGCAGCAGTACGACTCTCGTCATTGTACGATGAGATAAGGCCAG 1360 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct 1316 AGGAGGTGAAGAAGGAAGCAGCAGTACGACTCTCGTCATTGTACGACGAGATAAGGCCGG 1375 Query 1361 CGATTGAGGAGCATGAGAGAGATAGCCAAGACAGTGTAGCAACAAGTGTGGCGGAGAAAT 1420 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1376 CGATTGAGGAGCATGAAAGAGATAGCCAAGACAGTGTAGCAACAAGTGTGGCGGAGAAAT 1435 Query 1421 GGATACAAGCAAGCTGTAATAAACTAAAGGCAGAGTTTGATCTTTACTCTAGTGTAATAA 1480 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1436 GGATACAAGCAAGCTGTAATAAACTCAAGGCAGAGTTTGATCTTTACTCTAGTGTAATAA 1495 Query 1481 AGAACATCGCTTCCACTCCCATCAAACCACAAGACACAAAGACCAAAGTCGCGGAGGCAG 1540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1496 AGAACATCGCTTCCACTCCCATCAAACCACAAGACACAAAGACCAAAGTCGCGGAAGCAG 1555 Query 1541 GAAACGAAGACCATATTAAACTCTTGGAAGCCAAATGA 1578 |||||||||||||||||||||||||||||||||||||| Sbjct 1556 GAAACGAAGACCATATTAAACTCTTGGAAGCCAAATGA 1593 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77911245840 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5