BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316612 Length=588 Score E Sequences producing significant alignments: (Bits) Value AT1G76965.1 | Symbols: | Encodes a Protease inhibitor/seed sto... 634 0.0 > AT1G76965.1 | Symbols: | Encodes a Protease inhibitor/seed storage/LTP family protein | chr1:28921729-28922292 REVERSE LENGTH=564 Length=564 Score = 634 bits (343), Expect = 0.0 Identities = 500/572 (87%), Gaps = 25/572 (4%) Strand=Plus/Plus Query 1 ATGGAGATCATTCCATTGATGCTCATTTCCGTCATCATACTCTTGACATCATTTCCGGCT 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 ATGGAGATCATTCCATTGATGCTCATTTCCGTTATCATACTCTTGACATCATTTCCGGCT 60 Query 61 CCGATTAAAGTCTCCGGCAGGGGCGGCGGCGGCGGCTTTGTTGGTAGTGGGAATC-CTGG 119 ||||||||||| ||||||||||| || || |||||||||||||||||||| || | || Sbjct 61 CCGATTAAAGTGTCCGGCAGGGGTGGAGGAGGCGGCTTTGTTGGTAGTGGCAA-CTCTCC 119 Query 120 TGGTATTGGAAGCGGCTATTTTGGTGGTGGTGGGAATGCTGGCCCCGGCTATAGGGGTGG 179 | ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct 120 TAGTATTGGAAGCGGCTATTTTGGTGGTGGTGGGAATCCTGGCACCGGCTATATGGGTGG 179 Query 180 AAATATCCCTAGCGGCGGCAGCATTAGGGATGGGAGTAATGTTGGCACCGGTTATAGGGG 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GGGTATCCCTAGCGGCGGCAGCATTAGGGATGGGAGTAATGTTGGCACCGGTTATAGGGG 239 Query 240 TGGGGCTTCA-GGCGGCAAGCCTTCGGGTGGCGGTGACACCGGTCCGGCAATTGTGGTGA 298 |||| |||| || ||||||||||| ||||| |||||| ||||| |||||||||||||| Sbjct 240 TGGGT-TTCAAGGAGGCAAGCCTTCAGGTGGTGGTGACCCCGGTGCGGCAATTGTGGTGT 298 Query 299 TTCCTAAGAAGCCCGATGAACCTGTGAAGGTGGTGCCCACGCCAATGCCACAATATAGGA 358 |||||||||||||||| |||||||||||||||||||| ||||||||||||||| | Sbjct 299 TTCCTAAGAAGCCCGAGGAACCTGTGAAGGTGGTGCCAACGCCAATGCCACAAG-T---- 353 Query 359 TGCCAATGCCACAAGAATGCCTACCTGAAGTTAGACATTGCATCAATACACATGTATACG 418 | ||| ||| || | |||||||||||||||||||| ||||||||||| Sbjct 354 T-----TGC-----GAA--CCGA----AAGTTAGACATTGCATCAATGTACATGTATACG 397 Query 419 GAGGTGCTGGGGAACCTCACCAAGGCGGAGCATGTTGTAACAAATTTAGGCAATCAAGAA 478 || | || ||| ||||||||| |||||||||||||||||||||||||||| | | |||| Sbjct 398 GACGCGCCGGGCAACCTCACCGAGGCGGAGCATGTTGTAACAAATTTAGGTACGCGAGAA 457 Query 479 GATGTATCTGTAAATTCCTTGAGTCTCAGGATGCTCACCTAACCAAAAAATCTAGTGGTA 538 ||||| ||||||||||||||| |||| | ||| ||||||||| |||| |||||| |||| Sbjct 458 GATGTGTCTGTAAATTCCTTGTGTCTAATGATACTCACCTAAACAAACAATCTAATGGTG 517 Query 539 TACTTCGAGGTTGTCATTTTAAACGCAACTGT 570 |||||||||||||||||||||||||||| ||| Sbjct 518 TACTTCGAGGTTGTCATTTTAAACGCAATTGT 549 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28281824761 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5