BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316635 Length=645 Score E Sequences producing significant alignments: (Bits) Value AT1G77230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 931 0.0 > AT1G77230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:29016120-29019768 FORWARD LENGTH=2561 Length=2561 Score = 931 bits (504), Expect = 0.0 Identities = 608/657 (93%), Gaps = 12/657 (2%) Strand=Plus/Plus Query 1 ATGAAGCTAACGTGGAACAAGAACCCTAAGAAACGATCTCGCGTAGCTCTATCGAATTTC 60 ||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||| Sbjct 10 ATGAAGCTAACGTGGAACAAGAACCCTAAGAAACGATCTCGTTTGGTTTTATCGAATTTC 69 Query 61 CCGGATCTTCCTTTCGAGAAGGATGATGCTCCAGAGTCCCAATCTCATCGTCAGTTTCGT 120 ||||||||||||||||||||||||||| ||| |||||| |||||||||| ||| |||||| Sbjct 70 CCGGATCTTCCTTTCGAGAAGGATGATTCTCTAGAGTCTCAATCTCATCTTCATTTTCGT 129 Query 121 GAAGATGATATTGGTCGTAGACAAATTACCGATCAATTGGACTCGTC-----------GG 169 ||||||||||||| ||||||||||| ||||||||||||||||||||| || Sbjct 130 GAAGATGATATTGATCGTAGACAAACTACCGATCAATTGGACTCGTCGGAGGTTGGAGGG 189 Query 170 -ATCATCCTCGTGAGAAATTCGATCTCGAAGCTAAGGATCTGGCAGAGTCCATAAGAGCC 228 |||||||||||||||| |||||| ||||||||||| | || ||||||||||| |||||| Sbjct 190 AATCATCCTCGTGAGAATTTCGATGTCGAAGCTAAGAAACTCGCAGAGTCCATTAGAGCC 249 Query 229 CAAGGAGATAAACTAGCTGAGGAAGGTAAATACCAGGAGGCTCTGGGGAAATGGGAAGCT 288 |||||||| || | ||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 250 CAAGGAGACAAGTTCGCTGAGGAAGGAAAATACCAGGAGGCTCTAGGGAAATGGGAAGCT 309 Query 289 GCTCTTAATCTTCTTCCCGAAGATGCAGTCCTGCATGAACAGAAAGCACAAGTGTTACTT 348 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 310 GCTCTTAATCTTGTTCCCGAAGATGCAATCCTGCATGAACAGAAAGCACAAGTGTTACTT 369 Query 349 GAGCTTGGTGATGCATGGAAAGCACTCAAGGCTGCAACACGAGCTACTGAGATAGATCCA 408 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 370 GAGCTTGGTGATGCATGGAAAGCACTCAAAGCTGCAACACGAGCTACTGAGATAGATCCA 429 Query 409 TCTTGGGCTGAGGCATGGACTACTCTTGGAAGAGCACAACTAAATTTTGGTGAACCGGAC 468 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 430 TCGTGGGCTGAGGCATGGACTACTCTTGGAAGAGCACAACTAAATTTTGGTGAGCCGGAC 489 Query 469 AGTGCTATCAGGAGTTTTGAAAGTGCATTATCGATCAATGCGGATTCCAGAGAGGCGAAC 528 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 490 AGTGCTATCAGGAGTTTTGAAAGTGCATTATTGATCAATGCGGATTCCAGAGAGGCTAAA 549 Query 529 GACGATCTAAAAACTGCAAAACAACTAATAAAGAAGAGAGAACAGCTTCAGACATCAGGA 588 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 550 GACGATCTTAAAAGTGCAAAACAACTAATAAAGAAGAGAGAACAGCTTCAGACATCAGGA 609 Query 589 CAGGACACCGACACTAAACGTTTTGTGGTCGACGACAAGAACATAGAGCCAAACTAA 645 |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct 610 CAGGACACCGACACTACACGATTTGTGGTCAACGACAAGAACATAGAGCCAAACTAA 666 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31145171140 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5