BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316691 Length=999 Score E Sequences producing significant alignments: (Bits) Value AT1G77790.1 | Symbols: | Glycosyl hydrolase superfamily protei... 1410 0.0 > AT1G77790.1 | Symbols: | Glycosyl hydrolase superfamily protein | chr1:29250692-29251976 REVERSE LENGTH=1041 Length=1041 Score = 1410 bits (763), Expect = 0.0 Identities = 916/991 (92%), Gaps = 5/991 (1%) Strand=Plus/Plus Query 7 CTCCTATCCATCCAAATCTTTTGCCCAGCTGGTGTTGCAGGGGACATCACCGGAGTTTGT 66 ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||| Sbjct 40 CTCCTGTCCATCCAAATCTTTTGCACAGCGGGTGTTGCAGGGGACATCACCGGAGATTGT 99 Query 67 TACGGCCGGAACGGCAACAATCTCCCAACGCCGGCAGATACAGTAGCTTTATACAAAACC 126 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | Sbjct 100 TACGGCCGGAACGGCAACAATCTCCCAACGCCGGCAGATACAGTTGCTCTATACAAAAGC 159 Query 127 AACAACATCGACGCAATCCGTATGTACGAGCCCTTCGCCGACATGCTCGAAGCTCTCCGT 186 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 160 AACAACATCGACGCAATCCGTATGTACGAGCCCTTCGCAGACATGCTCGAAGCGCTTCGT 219 Query 187 GGCTCAGGTCTCTCCGTCGCGTTTGGTCCACGAAACGAAGAAATCCAATCCCTAGCCCAA 246 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct 220 GGCTCAGGTCTCTTAGTCGCGTTTGGTCCACGAAACGAAGATATCCAATCCCTAGCTCAC 279 Query 247 GATCCAGCCGCCGCAACAAATTTCGTCGCCACCTGGATCACACCTTACCAAAACGACGTC 306 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 280 GATCCAGCCGCCGCAACAAATTTCGTCTCCACCTGGATTACACCTTACCAAAACGACGTT 339 Query 307 GCAATCAAATGGATCACAATCGGTAACGAAGTCTTCCCCGGAGAAATCGCTCCATTCGTC 366 ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| || Sbjct 340 GCAATTAAATGGATCACAATTGGTAACGAAGTCTTCCCCGGAGAAATCGCTCAATTTGTT 399 Query 367 GCCGCCGCGATCAGAAACGTCAACGCCGCGCTAACGAATTCCGGCGTCACAGGAATAGCC 426 ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| | Sbjct 400 GCCGCCGCGATAAAAAACGTCAACGTCGCGCTAACGAATTCCGGCGTCACAGGAATCTCT 459 Query 427 GTCACAACGGTTTTAGCTATGAACGCGTTGACCAATTCATATCCACCTTCAGCTGCAACA 486 ||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||| Sbjct 460 GTCACGACGGTTTTAGCTATGACCGCGTTGACCAATACATATCCACCTTCCGCTGCAACA 519 Query 487 TTCCTCCCAGATCTAACCGAGATCATGACGGAGATTTCATCGATACTCTCTCAGACGAAT 546 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct 520 TTCCTCCCAGATCTAACCGAGATCATGACGGAGATTACATCGATACTCTCAGAGACGAAT 579 Query 547 TCGCCTCTCATGACCAATATCTACCCGTACTTCGCATACGCGTCAGATCCTTATCACATC 606 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 580 TCGCCTCTCATGACGAATATCTACCCGTACTTCGCATACGCGTCAGATCCATATCACATC 639 Query 607 TCACTCGATTACGCTAGTTTCAAATCCGATACGCCGGTAGTGATCGACGGTGATTTGAAG 666 ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| | Sbjct 640 TCACTCGATTACGCTAGTTTCAAATCCAATACACCGGTAGTGATAGACGGTGATTTGTAT 699 Query 667 TACACCAACATGTTCGAGGCGATGGTGGACGGATTCAATGCGGCGTTGGAGAAGATCAAC 726 |||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 700 TACAACAATATGTTTGAGGCGATGGTTGACGGATTCAATGCGGCGTTGGAGAAGATCAAC 759 Query 727 GCCGGAAATGTGGTGGTGATGGTGGCGGAGTCTGGATGGCCGACGGAGGGAAATCCACCG 786 |||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 760 GCCGCAAACGTGGTGGTGATGGTGGCGGAGACGGGATGGCCGACGGAGGGAAATCCACCG 819 Query 787 TATACGAGTGTTGATAACGCCAAGGCCTACAATTTGGGGATTAGGACATGTGGGGGATCT 846 | ||||||||||||||||| |||||||| ||| |||||||| | ||||||||| ||||| Sbjct 820 CACACGAGTGTTGATAACGCGAAGGCCTATAATATGGGGATTCGAACATGTGGGAGATCT 879 Query 847 G-A-A-CGGAAGCGGACGCCTCGCCGGCCGGAGACGCCGGTGGACGTGTTTCTATTCGCG 903 | | | |||||||||||||| ||||||| | |||||||| ||||||||||||||||| Sbjct 880 GCAGAACGGAAGCGGACGCCCCGCCGGCAAAACACGCCGGTTGACGTGTTTCTATTCGCA 939 Query 904 ATGTTCAGAGAGAATCAGAAGGATGGTCCGGTGGAGCAGAGCTTT-GGAATCTTTGCACC 962 ||||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct 940 ATGTTCAAAGAAAATCAGAAGGATGGTCCGGTGGAACAGAG-TTTCGGAATCTTTGCACC 998 Query 963 TGATATGACTCCAGTCTACGATCTCTTTTGT 993 |||||||||||||||||||||||| |||||| Sbjct 999 TGATATGACTCCAGTCTACGATCTTTTTTGT 1029 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48928059178 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5