BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316927 Length=1068 Score E Sequences producing significant alignments: (Bits) Value AT1G80330.1 | Symbols: ATGA3OX4, GA3OX4 | gibberellin 3-oxidase... 1568 0.0 > AT1G80330.1 | Symbols: ATGA3OX4, GA3OX4 | gibberellin 3-oxidase 4 | chr1:30198061-30199537 REVERSE LENGTH=1068 Length=1068 Score = 1568 bits (849), Expect = 0.0 Identities = 997/1070 (93%), Gaps = 4/1070 (0%) Strand=Plus/Plus Query 1 ATGACTTCATTAGCAGAAGAGATATGTATTGGAAACTTAGGCAGTCTCCAAACACTCCCC 60 ||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1 ATGCCTTCACTAGCAGAAGAGATATGTATTGGTAACTTAGGCAGTCTCCAAACACTCCCC 60 Query 61 GACTCGTTCACCTGGAAACTCACCGCCGCCGACTCCGTTCTGCCTCCCTCCTCTGCCGTC 120 || |||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||| Sbjct 61 GAGTCGTTCACCTGGAAACTCACAGCCGCCGACTCCCTTCTGCGTCCCTCCTCCGCCGTC 120 Query 121 TC-CTCAGGTACAGTGGAAGAGTCCATTCCGGTGATCGACCTCTCCGATTCTGACGTCAC 179 || || | ||||||||||||||||||| |||||||||||||| || ||||||| || Sbjct 121 TCATTC-GACGCAGTGGAAGAGTCCATTCCTGTGATCGACCTCTCTAATCCTGACGTTAC 179 Query 180 CACTCTCATAGGAAATGCGTGTAAAACGTGGGGAGCGTTTCAGATAGCCAACCACGGGAT 239 ||| ||||| ||| |||| | ||||| |||||||||||||||||||||||||||||||| Sbjct 180 CACCCTCATTGGAGATGCCTCCAAAACATGGGGAGCGTTTCAGATAGCCAACCACGGGAT 239 Query 240 TTCTCAGAAGCTCCTCGACGATATCGAGTCTCTGTCCAAAACCCTTTTTGATATGCCGTC 299 |||||||||||| ||||| |||||||||||||||||||||||||| || || |||||||| Sbjct 240 TTCTCAGAAGCTTCTCGATGATATCGAGTCTCTGTCCAAAACCCTATTCGACATGCCGTC 299 Query 300 AGAGAGGAAGCTTGAAGCGGCTTCCTCCGATAAAGGAGTTAGTGGCTACGGAGAACCTCG 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 AGAGAGGAAGCTTGAAGCGGCTTCCTCCGATAAAGGAGTTAGTGGCTACGGAGAACCTCG 359 Query 360 AATCTCTCCCTTTTTCGAGAAGAAAATGTGGTCTGAAGGGTTCACGATAGCGGATGCCTC 419 |||||| ||||||||||||||||||||||||||||||||||| || || || |||| ||| Sbjct 360 AATCTCCCCCTTTTTCGAGAAGAAAATGTGGTCTGAAGGGTTTACTATTGCCGATGACTC 419 Query 420 CTATCGCAACCATTTCATTTCTCTTTGGCCTCATGATCACACCAAGTACTGCGGAATAAT 479 ||| ||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| Sbjct 420 CTACCGCAACCATTTCAATACTCTTTGGCCTCATGATCACACCAAGTACTGCGGTATAAT 479 Query 480 GGAAGAATACGTGGACGAAATGGAAAAATTAGCGAGCAAACTTGTGTCTTGCATATTAGG 539 ||||||||||||||||||||||||||||||| |||| |||| ||| |||||||||||| Sbjct 480 CCAAGAATACGTGGACGAAATGGAAAAATTAGCAAGCAGACTTCTGTATTGCATATTAGG 539 Query 540 CTCACTTGGTGTCACCGTGGAAGACATTGGATGGGCTCACAAGCTAGAGAAATCTGGATC 599 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 540 CTCACTTGGTGTCACCGTGGAAGACATTGAATGGGCTCACAAGCTAGAGAAATCTGGATC 599 Query 600 AAAAGTGGGCCGAGGCGCCATACGACTAAACCATTACCCGGTTTGTCCTGAACCAGAACG 659 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 600 AAAAGTGGGCAGAGGCGCCATACGACTAAACCACTACCCGGTTTGTCCTGAACCAGAACG 659 Query 660 AGCCATGGGTTTAGCCGCTCATACAGATTCCACTATCCTAACCATTCTGCACCAGAGCAA 719 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 660 AGCCATGGGTCTAGCCGCTCATACAGACTCCACTATCCTAACCATTCTGCACCAGAGCAA 719 Query 720 CACGGGAGGGCTACAAGTGTTCAGGGAAGAGTCCGGTTGGGTTACGGTTGAGCCAGTTCC 779 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct 720 CACGGGAGGGCTACAAGTGTTCAGGGAAGAGTCCGGTTGGGTCACGGTTGAGCCGGCTCC 779 Query 780 TGGTGTCCTCGTGGTCAACATGGGCGATCTCTTTCACATCTTATCAAACGGGAAAATCCC 839 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct 780 TGGTGTCCTCGTGGTCAACATTGGTGATCTCTTTCACATCTTATCGAACGGGAAAATCCC 839 Query 840 AAGCGTGGTTCACCGAGCCAAAGTCAACCATACTCGGTCAAGAATTTCGATTGCGTACTT 899 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 840 AAGCGTGGTTCATCGAGCCAAAGTTAACCATACTCGGTCAAGAATTTCGATTGCGTACTT 899 Query 900 GTGGGGTGGTCCAGCTGGTGAAGTGCAAATCGCACCTATATCTAAGTTAATCGGTCCGGT 959 |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct 900 ATGGGGTGGTCCAGCTGGTGATGTGCAAATCGCACCTATCTCTAAGTTAACCGGTCCGGC 959 Query 960 TGAACCGTCTCTATACCGATCAATCACATGGAAGGAGTATCTCCAAATAAAGTACGAGGT 1019 |||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| Sbjct 960 TGAACCGTCTCTTTACCGGTCAATTACATGGAAAGAGTATCTCCAAATAAAGTATGAGGT 1019 Query 1020 TTTCGACAAGGC-ATTGGACGCAATTAGGGTCATTAATCCCACCAATTAA 1068 |||||||||||| || |||||||||||||||| ||||||||||||||||| Sbjct 1020 TTTCGACAAGGCCAT-GGACGCAATTAGGGTCGTTAATCCCACCAATTAA 1068 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52308967890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5