BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317312
Length=3372
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04490.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 2340 0.0
AT4G38092.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 464 2e-129
> AT3G04490.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G38092.1);
Has 75 Blast hits to 64 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr3:1200642-1209869
FORWARD LENGTH=3687
Length=3687
Score = 2340 bits (1267), Expect = 0.0
Identities = 1356/1400 (97%), Gaps = 2/1400 (0%)
Strand=Plus/Plus
Query 1 ATGCGCGCGATTGAACTTGCTTGCTCTTACATTCAGATAAATAGTAATCCAGTTGCTGCC 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 247 ATGCGCGCGATTGAACTTGCTTGCTCTTACATTCAGATTAATAGTAATCCAGTTGCTGCT 306
Query 61 GAGGCTACCATTTTGTCGCTTCACCAGTCCCCACAGCCGTATAAGGCGTGTAGATATATT 120
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 307 GAGGCAACCATTTTGTCGCTTCACCAATCCCCACAGCCGTATAAGGCGTGTAGATATATT 366
Query 121 CTTGAAAATTCTCAGGTGGCAAATGCTAGGTTTCAAGCTGCTGCAGCTATACGAGAAGCA 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 367 CTTGAAAATTCTCAGGTGGCAAATGCTAGGTTTCAAGCTGCTGCAGCTATTCGAGAATCA 426
Query 181 GCTATCAGGGAATGGAGCTTTCTTGCCACAGATGATAAAGGGGGTTTGATTAACTTCTGC 240
||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct 427 GCTATCAGGGAATGGAGCTTTCTTGCCACCGATGATAAAGGGGGCTTGATTAGCTTCTGC 486
Query 241 CTTGGCTATGTCATGCAGCATGCTAATTCATCCGAGGGATATGTGCTTTCAAAAGTATCT 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 487 CTTGGCTATGTCATGCAGCATGCTAATTCATCTGAGGGATATGTGCTTTCAAAAGTATCT 546
Query 301 TCTGTGGCAGCACAGCTGATGAAAAGAGGCTGGCTTGAGTTTACTCCAGCCGAGAAGGAA 360
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 547 TCTGTGGCTGCACAGCTGATGAAAAGAGGCTGGCTTGAGTTTACTCCAGCCCAGAAGGAA 606
Query 361 GTCTTTTTCTATCAGATCAACCAAGCTATTCTTGGTTCTCGTGGCTTAGATGTGCAGTTC 420
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 607 GTCTTTTTCTATCAGATCAACCAGGCTATTCTTGGTTCTCATGGCTTAGATGTGCAGTTC 666
Query 421 ATCGGTGTAAATTTTCTTGAATCATTGGTATCTGAGTTCTCACCCTCTACTTCAAGTGCC 480
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 667 ATTGGTGTAAATTTTCTTGAATCATTGGTATCTGAATTCTCACCCTCTACTTCAAGTGCC 726
Query 481 ATGGGTCTCCCTAGGGAATTTCATGAAAATTGTCGCAAGTCACTAGAGCAAAACTTTTTG 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 727 ATGGGTCTCCCTAGGGAATTTCATGAAAATTGCCGCAAGTCACTAGAGCAAAACTTTTTG 786
Query 541 AAGACTTTCTATCAGTGGGCACAAGATGCTGCTTTGAGTGTTACAAACAAGATTATCGAA 600
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 787 AAGAGTTTCTATCAGTGGGCACAAGATGCTGCTTTGAGTGTTACAAGCAAGATTATTGAA 846
Query 601 TCACATTCTAGTGTCCCTGAGGTTAAGGTTTGCAATGCTACACTGCGATTAATGCATCAA 660
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 TCTCATTCTAGTGTCCCTGAGGTTAAGGTTTGCAATGCTACACTGCGATTAATGCATCAA 906
Query 661 ATACTAAATTGGGAGTTTCGTTACAGCAAAGGTGGCACAAGAGCCAGCATTAATGTATTC 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 907 ATACTAAATTGGGAGTTTCCTTACAGCAAAGGTGGCACAAGAGCCAGCATTAATGTATTC 966
Query 721 TCTGACGGAATTAGAGCTGATAATGCATTTTCAAGAAAGACAGAATGTGTAATAGTTCAG 780
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 967 TCTGACGGAATTAGACCTGATAATGCATTATCAAGAAAGACAGAATGTGTAATAGTTCAG 1026
Query 781 CCTGGAGCTTCGTGGTGTGATGTTTTGCTTTCAAGCTCACATGTTGGATGGCTGATAAAT 840
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1027 CCTGGAGCTTCATGGTGTGATGTTTTGCTTTCAAGCTCACATGTTGGTTGGCTGATAAAT 1086
Query 841 TTATATTCGTCGGTGAGGCAGAAGTTTGATCTTGAAGGCTATTGGCTAGATTGTCCTGTT 900
|| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1087 TTCTATTCTTCGGTGAGGCAGAAGTTTGATCTTGAAGGTTATTGGCTAGATTGTCCTGTT 1146
Query 901 GCAGTCTCTGCTCGGAAACTTATCGTGCAATTGTGCTCCTTGGCAGGGGAAATATTTCCA 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GCAGTCTCTGCTCGGAAACTTATCGTGCAATTGTGCTCCTTGGCAGGGGAAATATTTCCA 1206
Query 961 TCCG-ACAATGGGCAGATGCAAGAGCAACATCTGCTCCTCCTGCTGTCGGGTGTGTTGCC 1019
| || |||||| |||||||| || ||||||||||||||||||||| |||||||||||||
Sbjct 1207 T-CGAACAATGTGCAGATGCGTGATCAACATCTGCTCCTCCTGCTGACGGGTGTGTTGCC 1265
Query 1020 CTGGATTGATCCTCCTGATGTCATTTCAAAGGAAATTGAAGAAGGAAGGAGTGGAAGTGA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 CTGGATTGATCCTCCTGATGTCATTTCAAAGGAAATTGAAGAAGGAAGGAGTGGAAGTGA 1325
Query 1080 GATGATTGATGGTTGTCGCGCATTGTTATCTATTGGGACTGTTACTACTCCTGTTGTCTT 1139
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 GATGATTGATGGTTGCCGCGCATTGTTATCTATTGGGACTGTTACTACTCCTGTTGTCTT 1385
Query 1140 TGACAAACTCTTGCGATCATTAAGACCCTTTGGCACCCTTACACTCTTATCTATGTTAAT 1199
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1386 TGACCAACTCTTGCGATCATTAAGGCCCTTTGGCACCCTTACACTCTTATCTATGTTAAT 1445
Query 1200 GGGTGAAGTTGTCAAAGTACTAATGGCAAATAGTACTGATGAAGAGACCTGGAGCTATGA 1259
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1446 GGGTGAAGTTGTCAAAGTACTAATGGCGAATAGTACTGATGAAGAGACTTGGAGCTATGA 1505
Query 1260 GGCACGCGATATCTTGCTAGATACCTGGACCACACTCCTTGCTTCAATGGATGGTTCTGG 1319
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1506 GGCACGCGATATCTTGCTAGATACCTGGACCACACTCCTTACTTCAATGGATGGTTCTGG 1565
Query 1320 GGGTAATGCGAGGCTACCACCTGAGGGGATGCATGCTGCAGCTAGTCTCTTTTCATTGAT 1379
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1566 GGGTAATGCGTGGCTACCACCTGAGGGGATACATGCTGCAGCTAGTCTCTTTTCATTGAT 1625
Query 1380 TGTGGAATCTGAACTAAAAG 1399
||||||||||||||||||||
Sbjct 1626 TGTGGAATCTGAACTAAAAG 1645
Score = 1773 bits (960), Expect = 0.0
Identities = 1002/1023 (98%), Gaps = 0/1023 (0%)
Strand=Plus/Plus
Query 1399 GCCATGGACGAAAGACTAGGCTCTTATGCTCTCATTGCAAGGGCAGCAGTCGATGCTACA 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 GCCATGGACGAAAGACTAGGCTCTTATGCTCTCATTGCAAGGGCAGCAGTCGATGCTACA 1761
Query 1459 ATTCCATTTTTAGCAAAACTTTTCTCTGATCATGTTGCACGCCTCCATCAGGGCAGGGGC 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1762 ATTCCATTTTTAGCAAAACTTTTCTCTGATCATGTTGCACGCCTCCATCAGGGCAGGGGC 1821
Query 1519 ACTGTTGATCCGACGGAAACTTTGGAAGAGGTCTACTCTTTGCTGCTAATAATCGGTCAT 1578
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1822 ACTGTTGATCCGACTGAAACTTTGGAAGAGGTCTACTCTTTGCTGCTAATAATCGGCCAT 1881
Query 1579 GTACTTGCAGATGAAGGGGAAGGGGAGACTGCCTTGGTTCCTGATGCTTTGCAATCTCAT 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1882 GTACTTGCAGATGAAGGGGAAGGGGAGACTGCCTTGGTTCCTGATGCTTTGCAATCTCAT 1941
Query 1639 TTTGTGGATGTTGTTGAGGCAAACAACCACCCTGTCGTGGTACTCTCAAGCTCAATAATA 1698
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1942 TTTGTGGATGTTGTAGAGGCAAACAACCACCCTGTCGTGGTACTCTCAAGCTCAATAATA 2001
Query 1699 AAATTCGCCGAGCAATGTTTGGATGCAGAAATGAGATCATCGATCTTTAGTCCTCGGCTA 1758
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2002 AAATTTGCCGAGCAATGTTTGGATGCAGAAATGAGATCATCGATCTTTAGTCCTCGGCTA 2061
Query 1759 ATGGAGGCAGTCATATGGTTCCTTGCAAGATGGTCTTTCACATATCTAATGCTCGTTGAA 1818
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2062 ATGGAGGCTGTCATATGGTTCCTTGCAAGATGGTCTTTCACATATCTATTGCTCGTTGAA 2121
Query 1819 GACTGCAATTTGGGTAGCAACCAGCTTCAGTCTCTACGTTCAAGAGCATGTTTATTCACG 1878
|| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct 2122 GAGTGCAATTTGGGTAGCAACAAGCTTCAGTCTCTACCTTCAAGAGCATGTTTATTTACG 2181
Query 1879 TTTTTCAACGAACACAATCAGGGGAAGTTTGTCCTTGATATAATTGTCCGGATCTCCTTG 1938
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2182 TATTTCAACGAACACAATCAGGGGAAGTTTGTCCTTGATATAATTGTCCGGATCTCCTTG 2241
Query 1939 ACATCGCTCATGTCTTACCCTGGTGAAAAGGACTTGCAGGAGTTAACATGTTTTCAATTA 1998
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2242 ACATCGCTCACATCTTACCCTGGTGAAAAGGACTTGCAGGAGTTAACATGTTTTCAGTTA 2301
Query 1999 CTGCATGCACTTGTTCGACGAAGAAATATTTGTTTTCACCTTCTATCACTGGACTCCTGG 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2302 CTGCATGCACTTGTTCGACGAAGAAATATTTGTTTTCACCTTCTATCACTGGACTCCTGG 2361
Query 2059 CGTAACCTGGCAAATGCTTTTGCAAATGACAAAACATTGTTTTTACTAAATAGTGTTAGT 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2362 CGTAACCTGGCAAATGCTTTTGCAAATGACAAAACATTGTTTTTACTAAATAGTGTTAGT 2421
Query 2119 CAGCGTTCATTGGCTCAAACCCTTGTTCTTTCTGCTTATGGAATGCGAAGTTCAGATGCA 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2422 CAGCGTTCATTGGCTCAAACCCTTGTTCTTTCTGCTTATGGAATGCGAAGTTCAGATGCA 2481
Query 2179 TCAAATCAATATGTGAAGGACCTCATGGCTCATATGACATCATCTCTAGTGGACTTGTCC 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2482 TCAAATCAATATGTGAAGGACCTCATGGCTCATATGACATCATCTCTAGTGGACTTGTCC 2541
Query 2239 AATAACAGTGACCTAAAAAATTTGGCTCAACAACCTGATATTATCATGCTGGTGAGTTGT 2298
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2542 AATAGTAGTGACCTTAAAAATTTGGCTCAACAACCTGATATTATCATGCTGGTGAGTTGT 2601
Query 2299 GTGTTAGAGCGGCTTCGAGGAGCGGCAAGTGCCACCGAACCCCGGACACAGAGAGCAATA 2358
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 2602 GTGTTAGAGCGGCTTCGAGGAGCGGCAAGTGCCACTGAACCCCGAACACAGAGAGCAATA 2661
Query 2359 TATGAGATGGGATTGTCTGTCATGAATCCTGTACTTCGTCTGCTCGAGGTTTACAAACAT 2418
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2662 TATGAGATGGGATTGTCTGTCATGAATCCTGTACTCCGTCTTCTCGAGGTTTACAAACAT 2721
Query 2419 GAG 2421
|||
Sbjct 2722 GAG 2724
Score = 1395 bits (755), Expect = 0.0
Identities = 791/809 (98%), Gaps = 0/809 (0%)
Strand=Plus/Plus
Query 2564 AGATATCATTGTCTCTCTCTAGTACCTTGCTTAATGAAGCAAAAACCGAAAAGTATAAGG 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 AGATATCATTGTCTCTCTCTAGTACCTTGCTTAATGAAGCAAAAACCGAAAAGTATAAGG 2782
Query 2624 ATTTACGCGCTCTGCTTCAGCTACTTTCCCATCTATGCTCAAAAGATATGGTTGATTTTT 2683
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 2783 ATTTACGCGCTCTGCTTCAGCTACTTTCCCATTTGTGCTCGAAAGATATGGTTGATTTTT 2842
Query 2684 CATCGGATAGTATTGAGACACAAAGCACAAATATTTCCCAGGTGGTGTACTTTGGTCTCC 2743
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2843 CATCTGATAGTATTGAGACACAAAGTACAAATATTTCCCAGGTGGTGTACTTTGGTCTCC 2902
Query 2744 ATATAATCACTCCACTTATAACTTTGGAACTCCTCAAATACCCCAAGCTTTGTTTCGATT 2803
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2903 ATATAATCACTCCACTTATAACTTTGGAACTCCTCAAATACCCCAAGCTTTGCTTCGACT 2962
Query 2804 ATTTCTCGCTCATTTCACATATGCTCGAGGTTTACCCTGAGACGCTCGCACAACTCAACA 2863
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2963 ATTTCTCGCTCATTTCACATATGCTCGAGGTTTACCCCGAGACGCTCGCACAACTCAACA 3022
Query 2864 ATGACGCATTTAGCCATGTAGTTACAACAGTTGACTTTGGTCTTCATCAGCAGGATGTCG 2923
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 3023 ATGACGCATTTAGCCATGTACTTACAACAGTTGACTTTGGTCTTCATCAGCAGGATGTAG 3082
Query 2924 ATATAGTCACAATGTGCCTGAGAGCTCTAAAGGCTCTTGCTTCATATCACTACAAAGAGA 2983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3083 ATATAGTCACAATGTGCCTGAGAGCTCTAAAGGCTCTTGCTTCATATCACTACAAAGAGA 3142
Query 2984 AAAATACTGGCAACTCGGGTTTGGGTTCTCACGCTGCTGGACACACAGATCCAAATGGAG 3043
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3143 AAAATGCTGGCAACTCGGGTTTGGGTTCACACGCTGCTGGACACACAGATCCAAATGGAG 3202
Query 3044 TATTCCATGAAGGAATACTGAGTCGATTCCTTCGTACATTGCTTCACTTCCTTCTTTTTG 3103
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3203 TATTCCATGAAGGAATATTGAGTCGATTCCTTCGTACATTGCTTCACTTCCTTCTTTTTG 3262
Query 3104 AGGATTACAGTACCGACCTAGTCAGTACAGCAGCAGATGCCTTGTTCCCGCTTATTCTCT 3163
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3263 AGGATTACAGTACCGACCTAGTCAGTACAGCAGCAGATGCCTTGTTCCCTCTTATTCTCT 3322
Query 3164 GTGAACCAAATCTTTACCAGGGATTGGGCAACGAACTGATTGAGAAGCAGGCGAATCCGA 3223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3323 GTGAACCAAATCTTTACCAGGGATTGGGCAACGAACTGATTGAGAAGCAGGCGAATCCGA 3382
Query 3224 ACTTTAAAACTAGGCTAGCAAACGCGCTTCAGGTGCTCACAACGTCAAACCAGCTATCCT 3283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3383 ACTTTAAAACTAGGCTAGCAAACGCGCTTCAGGTGCTCACAACGTCAAACCAGCTATCCT 3442
Query 3284 CATCCTTGGACCGTCTCAACTACCCAAGATTCAGAAAGAACCTCAACAACTTCCTTGTTG 3343
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 3443 CATCGTTGGACCGTCTCAACTACCAAAGATTCAGAAAGAACCTCAACAACTTCCTTGTCG 3502
Query 3344 AAGTTCGTGGGTTTCTCAAAACTAGGTGA 3372
|||||||||||||||| ||||||||||||
Sbjct 3503 AAGTTCGTGGGTTTCTGAAAACTAGGTGA 3531
> AT4G38092.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G04490.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr4:17885340-17886890 FORWARD LENGTH=595
Length=595
Score = 464 bits (251), Expect = 2e-129
Identities = 314/342 (92%), Gaps = 14/342 (4%)
Strand=Plus/Plus
Query 34 CAGATAAATAGTAATCCAGTTGCTGCCGAGGCTACCATTTTGTCGCTTCACCAGTCCCCA 93
||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct 103 CAGATTAATAGTAATCCAGTTGCTGCTGAGGCAACCATTTTGTCGCTTCACCAATCCCCA 162
Query 94 CAGCCGTATAAGGCGTGTAGATATATTCTTGAAAATTCTCAGGTGGCAAATGCTAGGTTT 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 163 CAGCCGTATAAGGCGTGTAGATATATTCTTGAAAATTCTCAGGTGGCAAATGCTAGGTTT 222
Query 154 CAAGCTGCTGCAGCTATACGAGAAGCAGCTATCAGGGAATGGAGCTTTCTTGCCACAGAT 213
||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||
Sbjct 223 CAAGCTGCTGCAGCTATTCGAAAATCAGCTATCAGGGAATGGAGCTTTCTTGCCACCGAT 282
Query 214 GATAAAGGGGGTTTGATTAACTTCTGCCTTGGCTATGTCATGCAGCATGCTAATTCATCC 273
|||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 283 GATAAAGGCGGCTTGATTAGCTTCTGCCTTGGCTATGTCATGCAGCATGCTAATTCATCC 342
Query 274 GAGGGATATGTGCTTTCAAAAGTATCTTCTGTGGCAGCACAGCTGATGAAAAGAGGCTGG 333
||||||||||||||||||||||||||||||||||| ||||||||| | ||
Sbjct 343 GAGGGATATGTGCTTTCAAAAGTATCTTCTGTGGCTGCACAGCTG--G--------CT-- 390
Query 334 CTTGAGTTTACTCCAGCCGAGAAGGAAGTCTTTTTCTATCAG 375
| ||||||||||| ||| |||||||||||||||||||||||
Sbjct 391 -T-GAGTTTACTCCTGCCCAGAAGGAAGTCTTTTTCTATCAG 430
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167808424335
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5