BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317356
Length=2103
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04910.1 | Symbols: WNK1, ZIK4, ATWNK1 | with no lysine (K) ... 3446 0.0
AT5G28080.2 | Symbols: WNK9 | Protein kinase superfamily protei... 846 0.0
> AT3G04910.1 | Symbols: WNK1, ZIK4, ATWNK1 | with no lysine (K)
kinase 1 | chr3:1354635-1358211 FORWARD LENGTH=2706
Length=2706
Score = 3446 bits (1866), Expect = 0.0
Identities = 2026/2105 (96%), Gaps = 4/2105 (0%)
Strand=Plus/Plus
Query 1 ATGAACAATCTGAGTTATCTTGAACCAGATTACTCTGAGTTTGTTGAAGTTGATCCTACC 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 ATGAACAATCTGAGTTATCTTGAACCAGATTACTCTGAGTTTGTTGAAGTTGATCCTACT 509
Query 61 GGAAGATATGGAAGATACAATGAAGTTCTGGGTAAAGGAGCTTCAAAGACTGTTTATAGA 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 510 GGAAGATATGGAAGATACAATGAAGTTCTTGGTAAAGGAGCTTCAAAGACTGTTTATAGA 569
Query 121 GCATTTGATGAATATGAAGGCATAGAAGTAGCATGGAACCAAGTGAAGCTCTACGATTTC 180
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 570 GCATTTGATGAATATGAAGGCATAGAAGTAGCATGGAACCAAGTTAAGCTATATGATTTC 629
Query 181 TTACAAAGCCCTGAGGATCTTGAGAGGCTTTACTGTGAGATTCATCTTCTCAAGACTCTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 CTACAAAGCCCTGAGGATCTTGAGAGGCTTTACTGTGAGATTCATCTTCTCAAGACTCTA 689
Query 241 AAACATAAGAACATTATGAAATTCTACACGTCTTGGGTTGATACCGCCAATAGGAATATC 300
|||||||||||||| |||||||||||||| |||||||| |||||||||||| | ||||||
Sbjct 690 AAACATAAGAACATCATGAAATTCTACACTTCTTGGGTCGATACCGCCAATCGAAATATC 749
Query 301 AATTTCGTCACTGAATTGTTCACTTCTGGCACCTTAAGACAATATAGACTCGGGCATAAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 750 AATTTCGTCACTGAATTGTTCACTTCTGGCACCTTAAGACAATATAGACTCAGACATAAG 809
Query 361 AGAGTGAACATAAGAGCGATGAAGCATTGGTGTAGGCAAATCTTGAGAGGCTTACATTAT 420
||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 810 AGAGTGAACATAAGAGCTATGAAGCATTGGTGCAGACAAATCTTGAGAGGCTTACATTAT 869
Query 421 CTTCATAGCCATGATCCTCCTGTGATCCACAGGGATCTCAAATGTGACAACATTTTCGTT 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 CTTCACAGCCATGATCCTCCTGTGATCCACAGGGATCTCAAATGTGACAACATTTTCGTT 929
Query 481 AACGGGAATCAAGGAGAAGTCAAGATTGGAGATCTTGGCCTCGCTGCCATTTTAAGAAAG 540
||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 930 AACGGGAATCAAGGAGAGGTCAAGATTGGAGATCTTGGCCTTGCTGCTATTTTAAGAAAG 989
Query 541 TCCCATGCTGCTCACTGCGTTGGGACTCCTGAGTTCATGGCACCTGAAGTTTACGAAGAA 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 990 TCCCATGCTGCTCACTGCGTCGGGACTCCTGAGTTCATGGCACCTGAAGTTTACGAAGAA 1049
Query 601 GCGTATAACGAATTGGTTGATATATACTCGTTCGGTATGTGCATTTTGGAAATGGTTACG 660
|| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1050 GCATATAACGAATTGGTTGATATATACTCGTTCGGTATGTGTATTTTGGAGATGGTTACG 1109
Query 661 TTTGATTACCCGTACAGTGAGTGTACTCACCCTGCTCAGATCTACAAAAAAGTTATGTCG 720
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1110 TTTGATTACCCGTACAGTGAGTGTACTCATCCTGCTCAGATCTACAAGAAAGTTATGTCG 1169
Query 721 GGCAAGAAACCGGATGCATTGTACAAGGTGAAAGACCCCGAGGTTAAATGTTTCATTGAG 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170 GGCAAGAAACCGGATGCATTGTACAAGGTGAAAGACCCCGAGGTTAAATGTTTCATTGAG 1229
Query 781 AAATGCTTGGCCACCGTATCGCTTAGAGTCTCTGCTCGTGAGTTACTAGATGACCCTTTT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 AAATGCTTGGCCACCGTATCGCTTAGAGTCTCTGCTCGTGAGTTACTAGATGACCCTTTT 1289
Query 841 CTCCGAATAGACGATGGTGAATTTGATTTAAGATCACTTGATATGGATGATTCGGTCGGT 900
||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||
Sbjct 1290 CTCCGTATAGACGATGGTGAGTTTGATTTAAGATCAGTTGATATGGAAGATTCGGTCGGG 1349
Query 901 CCACTCTATAGGCAGCCCCACCATCTTCCTGACTACTACAATTACCCGTCGAACAGTAGC 960
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1350 CCACTCTATAGGCAGCCGCACCATCTTCCTGACTACTACAATTACCCGTCGAATAGTAGC 1409
Query 961 TCTTTTAATCGTCAGTACTCAAATGGCAATTACCCGTCGAATAGTAGCTCTTTGAATCAT 1020
||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
Sbjct 1410 TCTTTGAATCGTCAGTACTCAAATGGCAACTACCCGTCGAATAGTAGCTCATTGAATCGT 1469
Query 1021 CAGTACTCAAATGGTTATAATAGTCATCACGAGTATCAGAACGGATGGGCGTATAATCCA 1080
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1470 CAGTACTCAAATGGTTATAATAGTCATCACGAGTATCAGAATGGATGGGCGTATAATCCA 1529
Query 1081 GCTGAGACAGAGGAGACTCACGGAATCGAGCTCTTTGAATCTCGAAACGATGATGATCAA 1140
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 1530 GCTGAGACAGAGGAGACTCACGGCATCGAGCTCTTTGAATCTCGAAACAATGATGATCAA 1589
Query 1141 GAAGAAGAAAAGAAATCTGGTAATGTTGACATAACCATCAAAGGGAAGAGAAGAGATGAT 1200
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1590 GAAGAAGAAAAGAAATCTGGTAATGTTGACATAACCATCAAAGGGAAGAGGAGAGATGAT 1649
Query 1201 GGTGGCTTGTTCTTGCGTCTTAGGATCGCCGACAAAGAAGGACGTGTCCGAAACATTTAT 1260
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1650 GGTGGCTTGTTCTTGCGTCTTAGGATCGCTGACAAAGAAGGACGTGTCCGAAACATTTAC 1709
Query 1261 TTTCCATTTGACATTGAGACGGACACCGCATTGAGCGTTGCAACAGAGATGGTAGCGGAA 1320
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 TTCCCATTTGACATTGAGACGGACACCGCATTGAGCGTTGCAACAGAGATGGTAGCGGAA 1769
Query 1321 CTGGATATGGACGATCACGGAGTCACAAAGATAGCCAACATGATTGACGGTGAGATATCT 1380
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1770 CTGGATATGGACGATCATGGAGTCACAAAAATAGCCAACATGATTGACGGTGAGATATCT 1829
Query 1381 TCTCTTGTACCCAGTTGGAGACCAGGACCTGAATTCGAAGAATGTCTTGCGGCTGCGGCG 1440
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1830 TCTCTTGTACCTAGTTGGAGACCGGGACCTGAATTCGAAGAATGTCTTGCGGCTGCGGCG 1889
Query 1441 GCGGCAAATGCTGCGAGCATTTGCAACAACTGCGTATCAAACCGCACCTCAATGGGCTCG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1890 GCGGCAAATGCTGCGAGCATTTGCAACAACTGCGTATCAAACCGCACCTCAATGGGCTCG 1949
Query 1501 GTGATGGATTTCCTGAGAACCAATCCTGGGGCAAATGTGATACAATGTTGCAGAAACGGA 1560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1950 GTGATGGATTTCCTGAGAACCAATCCTGGGGCAAATGTGATACAATGTTGCAGAAACGGG 2009
Query 1561 TGTGGCGAGACTCATGGCCGGTTTGAAGAGATCACGATCAGAGAAACCGAAGTTCGTCTT 1620
|| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 2010 TGCGGTGAGACTCATGGTCGGTTTGAAGAGATCACGATCAGAGAAACCGAGGTTCGTCTT 2069
Query 1621 AGAGAGCTTTGGAAGCTGCAGCAACAGCAAGAAAGCCGCGAGCTAAGCTCGATAGATTCA 1680
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2070 AGAGAGCTATGGAAGCTGCAGCAACAGCAAGAAAGCCGCGAGCTAAGCTCGATAGATTCA 2129
Query 1681 GGCAATAACCATTCTGAAGAAGAAGAGGAAGAGGAGGTGCTATACGAAAACCCCGAAAAC 1740
||| |||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||
Sbjct 2130 GGCCATAACCATTCCGAAGAAGAGGAGGAAGAAGAGGTGCTATACGAAGACCCCGAAAAC 2189
Query 1741 ATGTTTTCTTGCGAGGAAGGTAAC-ACGATAAACCATCTATCAGGTTCTG-AGTCGTTCT 1798
|||||||||||||||| ||||||| | |||||||||| |||| ||||||| | |||||||
Sbjct 2190 ATGTTTTCTTGCGAGGCAGGTAACGA-GATAAACCATATATCGGGTTCTGGA-TCGTTCT 2247
Query 1799 CGTTTATGCCATCTAAATACTGCGATGAGCTATCCGAGAAAACCGAAAATCAGGTCCAAC 1858
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2248 CGTTTATGCCATCTAAATACTGCGATGAGCCATCCGAAAAAACCGAAAATCAGGTCCAAC 2307
Query 1859 AAGAGTTGAGATGGCTTAAAGCCAAATGCCAAATTGAGCTCAGAGATATTCAGGATGAGC 1918
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 2308 AAGAGTTGAGATGGCTTAAAGCCAAATGCCAAATTGAGCTTAGAGATATTCAGGATGAAC 2367
Query 1919 AATTAAAAACCCGGTGGCCGGAATCCGGAGAAGAGGTGGAAATTTCTCCGAAAGACGGGT 1978
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 AACTAAAAACCCGGTGGCCGGAATCCGGAGAAGAGGTGGAAATTTCTCCGAAAGACGGGT 2427
Query 1979 TCTTGGGTTCGGGTTCGGGGTTGGGAAGAGAAGAAGATACGGTAAAAGAGATGTTTGGAG 2038
|||||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 2428 TCTTGGGTTCGGTTTCCGGGTTAGGAAGAGAAGAAGATACGGTGAAAGAGATGTTTGGAG 2487
Query 2039 GAAGATTGGTACCAAAGTGTCTGAAAAGGACAACTTCACTGCCTGTTGATGCCATTGATT 2098
||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2488 AAAGATTGGTACCAAAGTGTCTGAAAAGAACAACTTCACTTCCTGTTGATGCCATTGATT 2547
Query 2099 CTTGA 2103
|||||
Sbjct 2548 CTTGA 2552
Score = 84.2 bits (45), Expect = 5e-15
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 987 CAATTACCCGTCGAATAGTAGCTCTTTGAATCATCAGTACTCAAATGG 1034
|||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1388 CAATTACCCGTCGAATAGTAGCTCTTTGAATCGTCAGTACTCAAATGG 1435
> AT5G28080.2 | Symbols: WNK9 | Protein kinase superfamily protein
| chr5:10090070-10092402 REVERSE LENGTH=1636
Length=1636
Score = 846 bits (458), Expect = 0.0
Identities = 722/850 (85%), Gaps = 16/850 (2%)
Strand=Plus/Plus
Query 1 ATGAACAATCTGAGTTATCTTGAACCAGATTACTCTGAGTTTGTTGAAGTTGATCCTACC 60
||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 14 ATGAACAATCTCAGCCATCTTGAATCAGATTACTCTGAGTATGTTGAAGTTGATCCTACT 73
Query 61 GGAAGATATGGAAGATACAATGAAGTTCTGGGTAAAGGAGCTTCAAAGACTGTTTATAGA 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 74 GGAAGATATGGAAGATACAATGAAGTTCTGGGTAAAGGATCTTCAAAGACTGTTTACAGA 133
Query 121 GCATTTGATGAATATGAAGGCATAGAAGTAGCATGGAACCAAGTGAAGCTCTACGATTTC 180
| ||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 134 GGATTTGATGAGTATCAAGGTATAGAAGTAGCATGGAACCAAGTAAAGCTCTACGATTTC 193
Query 181 TTACAAAGCCCTGAGGATCTTGAGAGGCTTTACTGTGAGATTCATCTTCTCAAGACTCTT 240
|| || || ||| | || || |||||||| ||||||||||| ||||| ||||| || |||
Sbjct 194 TTGCAGAGTCCTCAAGAGCTAGAGAGGCTCTACTGTGAGATCCATCTCCTCAAAAC-CTT 252
Query 241 AAA-CATAAGAA-CATTATGAAATTCTACACGTCTTGGGTTGATACCGCCAATAGGAATA 298
||| || || || ||| ||||| |||||| | |||||||| ||||||| ||| | || |
Sbjct 253 AAAACACAA-AAGCATCATGAAGTTCTACGCTTCTTGGGTCGATACCGATAATCGAAACA 311
Query 299 TCAA-TTTCGTCACTGAATTGTTCACTTCTGGCACCTTAAGACAATATAGACTCGGGCAT 357
|||| ||| ||||||||| ||||||||||||||||||| ||||| ||||| || |||
Sbjct 312 TCAACTTT-GTCACTGAAATGTTCACTTCTGGCACCTTGAGACAGTATAGGCTAAAACAT 370
Query 358 AAGAGAGTGAACATAAGAGCGATGAAGCATTGGTGTAGGCAAATCTTGAGAGGCTTACAT 417
||||||||||||||||||||| | ||| |||||||||| || || || ||||| ||| |
Sbjct 371 AAGAGAGTGAACATAAGAGCGGTAAAGAATTGGTGTAGACAGATTTTAAGAGGATTAAAC 430
Query 418 TATCTTCATAGC-CATGATCCTCCTGTGATCCACAGGGATCTCAAATGTGACAACATTTT 476
|||||||||| | ||||| ||||||||||| || || |||||||| ||||||||||||||
Sbjct 431 TATCTTCATA-CACATGACCCTCCTGTGATTCATAGAGATCTCAAGTGTGACAACATTTT 489
Query 477 CGTTAACGGGAATCAAGGAGAAGTCAAGATTGGAGATCTTGGCCTCGCTGCCAT-TTTAA 535
| || ||||| ||||||||||||||||||||||||||||| || ||||| | ||||
Sbjct 490 TATAAATGGGAACCAAGGAGAAGTCAAGATTGGAGATCTTGGTCTTGCTGCT-TGTTTAC 548
Query 536 GAA-AGTCCCATGCTGCTCACTGCGTTGGGACTCCTGAGTTCATGGCACCTGAAGTTTAC 594
|| | || || |||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct 549 -AACACTCTCACGCTGCTCATTGTGTTGGCACACCAGAGTTCATGGCTCCTGAAGTTTAT 607
Query 595 GAAGAAGCGTATAACGAATTGGTTGATATATACTCGTTCGGTATGTGCATTTTGGAAATG 654
|||||| |||||| |||| || ||||| ||||||||||||||||| |||||||||||
Sbjct 608 AAAGAAGAATATAACCAATTAGTCGATATTTACTCGTTCGGTATGTGTGTTTTGGAAATG 667
Query 655 GTTACGTTTGATTACCCGTACAGTGAGTGTACTCACCCTGCTCAGATCTACAAAAAAGTT 714
|| ||||||||||||||||| ||||||||| |||||||||||||||| ||||| | ||||
Sbjct 668 GTAACGTTTGATTACCCGTATAGTGAGTGTTCTCACCCTGCTCAGATTTACAAGAGAGTT 727
Query 715 ATGTCGGGCAAGAAACCGGATGCATT-GTACAAGGTGAAAGACCCCGAGGTTAAATG-TT 772
|| |||||||||||||| |||| ||| | |||| ||||| || || ||||||| | | ||
Sbjct 728 ATATCGGGCAAGAAACCAGATGGATTAG-ACAAAGTGAAGGATCCAGAGGTTAGAGGGTT 786
Query 773 TCATTGAGAAATGCTTGGCCACCGTATCGCTTAGAGTCTCTGCTCGTGAGTTACTAGATG 832
| || ||||| || |||||||| || || |||||| |||||||| |||| |||||||||
Sbjct 787 T-ATCGAGAAGTGTTTGGCCACAGTGTCCCTTAGACTCTCTGCTTGTGAACTACTAGATG 845
Query 833 ACCCTTTTCT 842
||| ||||||
Sbjct 846 ACCATTTTCT 855
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104266531965
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5