BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg317484 Length=528 Score E Sequences producing significant alignments: (Bits) Value AT3G06220.1 | Symbols: | AP2/B3-like transcriptional factor fa... 763 0.0 AT3G06160.2 | Symbols: | AP2/B3-like transcriptional factor fa... 436 7e-122 > AT3G06220.1 | Symbols: | AP2/B3-like transcriptional factor family protein | chr3:1883616-1884953 REVERSE LENGTH=723 Length=723 Score = 763 bits (413), Expect = 0.0 Identities = 487/522 (93%), Gaps = 7/522 (1%) Strand=Plus/Plus Query 1 ATGGCTTCCGGTGATGTACTTCCTCGTTTCTACACTGTCTTTCTTTCCAATGTCAGTTCC 60 |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 143 ATGGCTTCCGGTGATGTACTTCCTCGCTTCTACACTGTCTTTCTTTCCTGTGTCAGTTCC 202 Query 61 AACTCTTTGAAGCTGATACCAAGGGT-TTACTACGAACATTTACCGCGTCGGTTGCCCAA 119 |||||||| ||||||||||| ||| |||||||||||||||||||||||| || ||||| Sbjct 203 AACTCTTT---GCTGATACCAA-GGTCTTACTACGAACATTTACCGCGTCGTTTACCCAA 258 Query 120 AACAGCGATTCTCACGGGAACTGGTGGAAGATTTTGGAAAGTAGCAATGCTGAGCAAGCG 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 259 AACAGCGATTCTCACGGGAACTGGTGGAAGAGTTTGGAAAGTAGCAATGATGAGCAAGCG 318 Query 180 AGAGCAAGTGTATTTTGAACAAGGCTGGGGAAATTTCGTGGCGGATAACGATCTAAAAGA 239 ||||||||||||||| | || |||||||| |||||||||||| |||||||| |||||||| Sbjct 319 AGAGCAAGTGTATTTGGCACGAGGCTGGGAAAATTTCGTGGCCGATAACGAGCTAAAAGA 378 Query 240 TGGAGAGTTCTTGACGTTTGTGTTTGATGGGCACAAAAGTTATGAAGTAAGTATATATGG 299 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| Sbjct 379 TGGAGAGTTCTTGACGTTTGTTTTTGATGGGTACAAAAGTTATGAAGTAAGTATCTATGG 438 Query 300 TCGCGG-AGAATGCAAAGAGACACGAGCAGTCATTCAAGTTGAAGAGATCTCTGATGAGA 358 |||||| || ||||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct 439 TCGCGGTAG-CTGCAAAGAGACGCGAGCAGTCGTTCATGTTGAAGAGATCTCTGATGAGT 497 Query 359 CAGAAAGTGACAACGATTCTCTTGGTAGCCTTGTTGACGTAACACCCATGCCAGTGGAAG 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 498 CAGAAAGTGACAACGATTCTCTTGGTAGCCTTGTTGACGTAACACCCATGCCAGCGGAAG 557 Query 419 AGAACTCTGATGATACAGAAGGTGACAATGATTCTGGTGATAGCGTTGTTGATGTAACAC 478 |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| | Sbjct 558 AGAACTCTGATGATACTGAAGGTGACAATGATTCTTGTGATAGCGTTGTTGACGTAACTC 617 Query 479 CCATGCCAGTGGAAGAGATAAGTGATGCGAGTGAGAGTGACT 520 |||||||||||||||||||||||||||| ||||| ||||||| Sbjct 618 CCATGCCAGTGGAAGAGATAAGTGATGCAAGTGATAGTGACT 659 > AT3G06160.2 | Symbols: | AP2/B3-like transcriptional factor family protein | chr3:1864273-1867267 FORWARD LENGTH=1253 Length=1253 Score = 436 bits (236), Expect = 7e-122 Identities = 346/396 (87%), Gaps = 19/396 (5%) Strand=Plus/Plus Query 1 ATGGCTTCCGGTGATGTACTTCCTCGTTTCTACACTGTCTTTCT-TTCCAATGTCAGTTC 59 ||||||||||||||||| |||||| | |||| ||||||||| || | ||| || ||| || Sbjct 231 ATGGCTTCCGGTGATGTTCTTCCTAGATTCTTCACTGTCTTCCTCTCCCATTG-CAGCTC 289 Query 60 C-AACTCTTTGAAGCTGATACCAAGGGT-TTACTACGAA-CATTTACCGCGTCGGTTGCC 116 | || || || | ||||||||| ||| ||||||| || | |||||| |||| |||||| Sbjct 290 CGAA-TCCATG--G-TGATACCAA-GGTCTTACTAC-AATCTTTTACCACGTCCGTTGCC 343 Query 117 CAAAACAGCGATTCTCA-CGGGAACTGGTGGAAGATTTTGGAAAGTAGCAATG-CTGAGC 174 ||| || |||||||||| | ||||||||||||||||||||||||||||||||| | |||| Sbjct 344 CAAGACTGCGATTCTCATC-GGAACTGGTGGAAGATTTTGGAAAGTAGCAATGAC-GAGC 401 Query 175 AAGCGAGAGCAAGTGTATTTTGAACAAGGCTGGGGAAATTTCGTGGCGGATAACGA-TCT 233 |||| ||||||||||||||||||||||||||||||||||||||| || |||||| | | | Sbjct 402 AAGCAAGAGCAAGTGTATTTTGAACAAGGCTGGGGAAATTTCGTTGCTGATAACCAGT-T 460 Query 234 AAAAGATGGAGAGTTCTTGACGTTTGTGTTTGATGGGCACAAAAGTTATGAAGTAAGTAT 293 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 461 AAAAGAGGGAGAATTCTTAACTTTTGTGTTTGATGGGCACAAAAGTTATGAAGTAAGTAT 520 Query 294 ATATGGTCGCGGAGAATGCAAAGAGACACGAGCAGTCATTCAAGTTGAAGAGATCTCTGA 353 |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 521 CTATGGTCGTGGAGATTGCAAAGAGACTCGAGCAGTCATTCAAGTTGAAGAGATCTCTGA 580 Query 354 TGAGACAGAA-AGTGACAACGATTCTCTTGGTAGCC 388 ||| |||||| | |||||||| ||||||| ||||| Sbjct 581 TGATACAGAAGA-TGACAACGTTTCTCTTCATAGCC 615 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25267775941 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5