BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317684
Length=1047
Score E
Sequences producing significant alignments: (Bits) Value
AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superf... 699 0.0
AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superf... 368 6e-101
AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superf... 324 1e-87
AT3G09915.1 | Symbols: | pseudogene, hypothetical protein | ch... 267 2e-70
AT3G09750.1 | Symbols: | Galactose oxidase/kelch repeat superf... 222 5e-57
AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing... 141 1e-32
AT2G03460.1 | Symbols: | Galactose oxidase/kelch repeat superf... 124 1e-27
AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superf... 58.4 1e-07
> AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr3:2675631-2676693 REVERSE LENGTH=1063
Length=1063
Score = 699 bits (378), Expect = 0.0
Identities = 493/545 (90%), Gaps = 22/545 (4%)
Strand=Plus/Plus
Query 1 ATGTCTTACCCGGAAAGAAAGAGGAAGAAGACACGGTGGTCAACGCCGCATTCGACTCC- 59
|||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct 32 ATGTCTTACCCGGAAAGAAAGAGGAAGAGGAGTCGGTGGTCAAAGCCGCATTCGAC-CCA 90
Query 60 AAA-----C-CCGTCACTTCCCGATGATTTGCTATTGAGCATCTTCGCACGCGTGTCAAG 113
||| | |||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 91 AAACCCGTCACCGTCACTTCCCGATGATGTGCTATTGAGCATCTTCGCACGCGTCTCAAG 150
Query 114 ATTATACTATCCTACTCTCT--CAC---T-C---AGCTTTCGATCTCTCCTAGCTTCACC 164
||| |||||||| ||||||| ||| | | ||||||||||||||||||||||||||
Sbjct 151 ATTGTACTATCCGACTCTCTCACACGTATCCGAGAGCTTTCGATCTCTCCTAGCTTCACC 210
Query 165 AGAGCTTTACAAGGCCAGGTCACTCTCGGCAAACACCGAGAGT-TGTCTCTATGTATGCT 223
|||||||||||| |||||||||||||||| ||||||||||| | |||||||| || ||||
Sbjct 211 AGAGCTTTACAAAGCCAGGTCACTCTCGGGAAACACCGAGA-TCTGTCTCTACGTGTGCT 269
Query 224 TACGGTGCTGTTCTGGTTATCGCTGGTTCACCCTCTGCCGTAAACCTGATCAAACCATAA 283
||||||||| | |||||||||||||||| | |||| |||||||||||||||||||| |||
Sbjct 270 TACGGTGCTCTACTGGTTATCGCTGGTTTAGCCTCAGCCGTAAACCTGATCAAACCCTAA 329
Query 284 CCAATAATAAGGAGAGGAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCGGTG 343
|| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 CC--T-ATGAGGAGAGGAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCGGTG 386
Query 344 GTTCTCCTAATGTACGATCTTCGAGTCTCGTGGCCGTTGGTTCTGATATCTACAACATTT 403
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 387 GTTCTCCTAATGTACGATCTTCGAGTCTCGTGGCGGTTGGTTCTGATATCTATAACATTT 446
Query 404 GCGGATCCATCAACAAAGCGTCCCCCTCCTCTAGCGTCTCGATTCTGGATTGCCGGTCTC 463
||||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||||
Sbjct 447 GCGGATCCATCAACAAAGCGTCCTCCTCCTCTAGCGTCTCAATTCTGGATTGTCAGTCTC 506
Query 464 ACAAGTGGCGAGAGGCTCCAAGCTTGCCGGTGGAGCTATGTTCAGTTTCTGCTAGCGTCC 523
||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 507 ACACGTGGCGGGAGGCTCCAAGCTTGCCGGTGGAGCTAAGTTCAATTTCTGCTAGCGTCC 566
Query 524 TTGAT 528
||||
Sbjct 567 GTGAT 571
Score = 497 bits (269), Expect = 7e-140
Identities = 422/491 (86%), Gaps = 30/491 (6%)
Strand=Plus/Plus
Query 572 ATGGCTATCCTGATTCCCGGAAAAACTCCTTTGAGGTAGGAAGTGAGGTTGCTTACAATT 631
|||| ||| ||||||||||||||||||||||| | | | || | ||||||||||||
Sbjct 588 ATGGGTATTCTGATTCCCGGAAAAACTCCTTT-A---A-G--GT--GTTTGCTTACAATT 638
Query 632 CCAAGGAAGGTAGATGGGAT-TCCAAG--GAACTTGGGATGGGTGGTTTTATGTTTTCAG 688
|||||||||||||||||||| || || | ||||||| |||| |||||||| || |||
Sbjct 639 CCAAGGAAGGTAGATGGGATCACCTAGTTGGACTTGGGGCGGGTAGTTTTATGCTTCCAG 698
Query 689 ATTCTTATTGCGAGATAGATAACGTTTTGTACTCTTTATCCGATGGAGCGTTCAGATGGT 748
|||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||
Sbjct 699 ATTCTTATTGCGTGATAGATAACGTTTCGTACTCTGTATCCGATGGAATGTTCAGATGGT 758
Query 749 ATGACACTGAGGTAAG-AGAGTGGAAAGATTTGAATGGTTTGTTTCAGCTGCCTAAGTTC 807
|||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||
Sbjct 759 ATGACACTGAGGTAAGAAG-GTGGAAAGATTTGAGGGGTTTGTTTCAGCTACCTAAGTTC 817
Query 808 TCTGCTAGTGCTTGTGTTAGATTGGCTGATTATGGTGGAAAGATGGCGGTCTTGTGGGAC 867
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 818 TCTGCGGGTGCTTGTGTTATATTGGCTGATTATGGTGGAAAGATGGCGGTCTTGTGGGAT 877
Query 868 CAATTGCCTTATCATTATGGCTATCAAAAGGA-GATTCATTGTGCGGTG---G---TTGA 920
||||||||||||||| |||||| ||| ||| | |||||| ||||||||| | ||||
Sbjct 878 CAATTGCCTTATCATCATGGCTTTCATAAG-ACGATTCAGTGTGCGGTGATTGCGCTTGA 936
Query 921 AAGGCCCACAAGATATGAAATGTGGGG-GAAAAGTTGTGAAATTTGGGGGAAAGTTGAGT 979
||||| |||||| | || | | | ||| |||||||||| ||||||||||||| |||||||
Sbjct 937 AAGGCGCACAAGTTTTGTATT-TCGGGAGAAAAGTTGTCAAATTTGGGGGAAGGTTGAGT 995
Query 980 GG-T-G-TGATCTTATGCTTACAGTCCCTACATCGTATGTTCTTGTTAAGGTTCTTGCTG 1036
|| | | |||| ||| |||||||||||||||||||||| |||||| |||||||||| ||
Sbjct 996 GGGTTGATGAT-TTA--CTTACAGTCCCTACATCGTATGATCTTGTGAAGGTTCTTGTTG 1052
Query 1037 CTACGCTTTGA 1047
|||| ||||||
Sbjct 1053 CTACTCTTTGA 1063
> AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:20830743-20831849 FORWARD LENGTH=1107
Length=1107
Score = 368 bits (199), Expect = 6e-101
Identities = 420/521 (81%), Gaps = 38/521 (7%)
Strand=Plus/Plus
Query 65 CGTCACTTCCCGATGATTTGCTATTGAGCATCTTCGCACGCGTGTCAAGATTATACTATC 124
||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||
Sbjct 5 CGTCACTTCCCGATGATTTGCTATTGAGCATCTTCGCACGCATCTCAAGATTGTACTATC 64
Query 125 CTACTCTCTCACT---C---A-G--CTTTCGATCTCTCCTAGCTTCACCAGAGCTTTACA 175
| |||||||| || | | | ||| |||||||| ||||||||||| || |||||||
Sbjct 65 CGACTCTCTCTCTTGTCTCCAAGAGCTTCCGATCTCTACTAGCTTCACCGGACCTTTACA 124
Query 176 AGGCCAGGTCACTCTC-GGCAAACACCGAGAGTTGTCTCTATGTATGCTTACGGTGCTG- 233
| ||| | ||||||| ||| | ||| |||||||||||||| || ||||| | | ||
Sbjct 125 AAGCCCGATCACTCTTAGGCCA-CACTGAGAGTTGTCTCTACGTGTGCTTTCATTT-TGA 182
Query 234 TTCTGGT--TATCGC---T-GGTTCACCCTCTGCCGTAAACCTGATCA-AACCATAACCA 286
|||||| || | | | ||||||| ||||| || |||||||| | |||| ||||||
Sbjct 183 TTCTGGCCCTAACACACATTGGTTCACTCTCTGTCGGAAACCTGA-CGGAACCCTAACCA 241
Query 287 AT-A-A----TAAGGAGAGGAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCG 340
|| | | |||| ||| |||||||| ||| |||| |||||||| || |||||||||
Sbjct 242 ATGACACCAGTAAGAAGAAGAAGTCAAATGGGTATGTTTTGGCTACTGTGCCAATTCCCC 301
Query 341 GTGGTTCTCCTAATGTACGA-TCTTCGAGTCTCGTGGCCGTTGGTTCTGATATCTACAAC 399
| | ||||| || | | | ||| ||||||||||| |||||||||||||||||||||
Sbjct 302 AT--T-CTCCTCCTGCAA-ACTTTTCAAGTCTCGTGGCGGTTGGTTCTGATATCTACAAC 357
Query 400 ATTTGCGGATCCATCAACAAAGCGTCCC-CCTCCTCTAGCGTCTCGATTCTGGATTGCCG 458
||| | |||||||| || || | ||| |||| ||||| |||||||||||||||| ||
Sbjct 358 ATTGGTGGATCCATTTACCTAG-GACCCTCCTCGTCTAGTGTCTCGATTCTGGATTCCCA 416
Query 459 GTCTCACAAGTGGCGAGAGGCTCCAAGCTTGCCGGTGGAGCT-ATGTTCAGTTTCTGCTA 517
|||||||| |||||| |||||||||||||||| ||||||||| |||| || ||||||||
Sbjct 417 GTCTCACATGTGGCGCGAGGCTCCAAGCTTGCGGGTGGAGCTGATGT-CACATTCTGCTA 475
Query 518 GCGTCCTTGATCA-AAAGATATATGTAGCAGGATGCTACAA 557
|||||||||| || ||||||||||||||||||| |||||||
Sbjct 476 GCGTCCTTGA-CAGAAAGATATATGTAGCAGGAAGCTACAA 515
Score = 122 bits (66), Expect = 5e-27
Identities = 154/193 (80%), Gaps = 20/193 (10%)
Strand=Plus/Plus
Query 684 TTCAGATTCTTATTGCGAGATAGATAACGTTTTGTACTCT-TT-ATCCGATGGAGCGTTC 741
|||| |||||| |||||||||| |||| ||||||| || | || || || |||| ||||
Sbjct 747 TTCATATTCTTTTTGCGAGATAAATAATGTTTTGTTCTATATTCAT-CG-CGGAGTGTTC 804
Query 742 AGATGGTATGACACTGAGGTAAGAGA-GTGGA-AAGATTTGAATGGTTTGTTTCA-G-CT 797
||||||||||| ||| || ||||| | ||||| || | ||||| |||||| || | | ||
Sbjct 805 AGATGGTATGATACTAAGTTAAGA-ATGTGGAGAATA-TTGAAAGGTTTG-TT-AGGACT 860
Query 798 GCCTAAG-TT--CTCTG-CTAGTGCTTGTGTTAGATTGGCTGATTATGGTGGAAAGATGG 853
||| || || || | || || || ||||||||||||||||||||||||||||||||
Sbjct 861 ACCT-AGTTTACCTGAGAATA-TG-TT-TGTTAGATTGGCTGATTATGGTGGAAAGATGG 916
Query 854 CGGTCTTGTGGGA 866
|||| || |||||
Sbjct 917 CGGTTTTATGGGA 929
> AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:13098141-13099531 REVERSE LENGTH=1391
Length=1391
Score = 324 bits (175), Expect = 1e-87
Identities = 430/545 (79%), Gaps = 50/545 (9%)
Strand=Plus/Plus
Query 52 TCGACTCCAAACCCGTCACTTCCCGATGATTTGCTATTGAG-CATCTTCGCACGCGTGTC 110
||||| |||| ||||||||||||||||||||| ||||| | |||| |||||||||| ||
Sbjct 70 TCGACAACAAATCCGTCACTTCCCGATGATTTGGTATTG-GTCATCATCGCACGCGTCTC 128
Query 111 AAGATTATACTATCCTA--CTCT--CTC-ACT-C---AGCTTTCGATCTCTCCTAGCTTC 161
|| |||||||||||||| |||| ||| || | ||||||||||||||||| |||||
Sbjct 129 AATATTATACTATCCTATTCTCTCACTCGTCTCCAAGAGCTTTCGATCTCTCCTGGCTTC 188
Query 162 ACCAGAGCTTTACAAGGCCAGGTCACTC-TCGGCAAACACCGAGAGTTGTCTCTATGTAT 220
||| ||||||||||||| |||||||||| | ||| || |||||| |||||||||| |
Sbjct 189 ACCGGAGCTTTACAAGGTCAGGTCACTCTTGGGC-CGCAGGGAGAGTCGTCTCTATGTGT 247
Query 221 GC-T---TACGGTGCTGTTCT------GGTTATCGCTGGTTCACCCTCTGCCGTAAACCT 270
|| | || || | || | || | ||||||||||||||||||| |||||
Sbjct 248 GCATAAATA-TGTATTCTTATAAAAACGGCCCTAGCTGGTTCACCCTCTGCCGGAAACCG 306
Query 271 GATCAAACCATAACCA--A-TAATAAGGA-GAGGA-A-GTCAAGTGGTTATGCT-TTGGC 323
|||| ||| | ||||| | ||||||||| ||||| | |||||||||||||| | |||||
Sbjct 307 GATCGAACAACAACCAGTAGTAATAAGGAGGAGGACAGGTCAAGTGGTTATG-TCTTGGC 365
Query 324 TAGAGTCCCAATTCCCGGTGGTTCTCCTAATGTA--C-GATCTTCGAGTCTCGTGGCCGT 380
||| ||||||||||| ||||||| || | | || | || |||| ||| ||
Sbjct 366 AAGAATCCCAATTCCC---CATTCTCCT-TTG-ACTCAGA-GATATAGCCTCGCGGCGGT 419
Query 381 TGGTTCTGATATCTACAACATTTGCGGATCCATCA-ACAAAGC-GTCCCCCTCCTCTAGC 438
||||||| ||||||| |||||| ||| | ||| | || | | | ||||||||||
Sbjct 420 TGGTTCTAATATCTATAACATTGGCGTAACCA-GATAC-CACCATTTGACCTCCTCTAGT 477
Query 439 GTCTCGATTCTGGATTGCCGGTCTCACAAGTGGCGAGAGGCTCCAAGCTTGCCGGTGGAG 498
|||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 478 GTCTGGGTTCTGGATTGCCGGTCTCACACGTGGCGCCAGGCTCCAAGCTTGCCGGTGGAG 537
Query 499 CTATGTT-CAGTTTCTGCTAGCGTCCTTGATCAAAAGATATATGTAGCAGGATGCTACAA 557
|||| || |||||||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct 538 CTAT-TTAGAGTTTCTGTTAGCGTCCTTGATCAAAAGATATATGTAGCAGGGT--TACA- 593
Query 558 CCAAG 562
|||||
Sbjct 594 CCAAG 598
Score = 97.1 bits (52), Expect = 3e-19
Identities = 159/208 (76%), Gaps = 17/208 (8%)
Strand=Plus/Plus
Query 676 TTTATGTTTTCAGATTCTTATTGCGAGATAGATAACGTTTTGTACTC-T-T--TATCCGA 731
|||||||||||| | | || ||||| | | | ||| ||||||||||| | | ||| ||
Sbjct 817 TTTATGTTTTCAAAATGTTTTTGCGTGGTTGGTAATGTTTTGTACTCATGTGCTAT-TGA 875
Query 732 TGGAGCGTTCAGATGGTATGACACTGAGGTAAGAG-AGTGGA-AAGATTTGAA-TGGTTT 788
||| |||||||||||||||||||||||||||| | |||| || ||||| | || |||
Sbjct 876 CCGAGTGTTCAGATGGTATGACACTGAGGTAAGAACA-TGGAGAA-ATTTGGAGTG-TTT 932
Query 789 GTTTC-AG--C---TGCCTAAGTTCTCTGCTAGTGCTTGTGTTAGATTGGCTGATTATGG 842
| | || | | || ||||| ||| | |||||| |||||| ||||||||||||||
Sbjct 933 GATAGGAGGACGACTACCCAAGTTATCTCCGCGTGCTTTTGTTAGTTTGGCTGATTATGG 992
Query 843 TGGAAAGATGGCGGTCTTGTGGGACCAA 870
||||||| | || || || ||| |||||
Sbjct 993 TGGAAAGCTCGCTGTTTTTTGGAACCAA 1020
> AT3G09915.1 | Symbols: | pseudogene, hypothetical protein |
chr3:3039015-3040186 REVERSE LENGTH=1172
Length=1172
Score = 267 bits (144), Expect = 2e-70
Identities = 352/446 (79%), Gaps = 39/446 (9%)
Strand=Plus/Plus
Query 58 CCAAACCCGTCACTTCCCGATGATTTGCTATT-GAGCATCTTCGCACGCGTGTCAAGATT 116
||||| | |||| |||| ||||||||||||| || |||| |||||||||| |||||||
Sbjct 75 CCAAATCAGTCA-ATCCCTATGATTTGCTATTGGA-CATCATCGCACGCGTCCCAAGATT 132
Query 117 ATACTATCCTACTCTCTCA--C---T-C---AGCTTTCGATCTCTCCTAGCTTCACCAGA 167
|||||||| ||||||||| | | | ||||||||||| |||||||||||||| ||
Sbjct 133 GTACTATCCGACTCTCTCACTCGTTTCCAAGAGCTTTCGATCCCTCCTAGCTTCACCGGA 192
Query 168 GCTTTACAAGG-C--CAGGTCACTCTCGGCAAACACCGAGAGTTGTCTCTATGTATGCTT 224
||||||||||| | ||||||| ||| || |||||||| ||||||||||||| |||||
Sbjct 193 GCTTTACAAGGCCAGCAGGTCATTCTTGGGTCACACCGAGCGTTGTCTCTATGTGTGCTT 252
Query 225 ACGGTGCTGTTCTGGTTATCGCTGGTTCACCCTCTGCCGTAAACCTGATCAAACCATAAC 284
|||||||||| |||||||||||||||||||||| || || || || ||||||||| || |
Sbjct 253 ACGGTGCTGTCCTGGTTATCGCTGGTTCACCCTGTGTCGGAAGCCAGATCAAACCCTATC 312
Query 285 CAAT-A-A-TAAGGAGAGGAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCGG 341
|||| | | | || | |||||||||||| |||| |||||| | |||||| ||| ||
Sbjct 313 CAATGACACCACTGAAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCCATT-CC-- 369
Query 342 TGGTTCTCCTAATGTACGATCTTCGAGTCTCGTGGCCGTTGGTTCTGATATCTACAACAT 401
| ||| || ||| || | |||||||||||||| |||||||||||||||| ||
Sbjct 370 TAGTTTTCATAAACCGCGCTTTTCGAGTCTCGTGGTGGTTGGTTCTGATATCT---AC-- 424
Query 402 TTGCGGATCCATCAACAAAGCGTCCCCCTCCTCTAGCGTCTCGATTCTGGATTGCCGGTC 461
| | |||| | | || |||||||||| ||||||||||||||||||||||||
Sbjct 425 -T----A--CATC--C--A-CG-GGCCCTCCTCTAACGTCTCGATTCTGGATTGCCGGTC 471
Query 462 TCACAAGTGGCGAGAGGCTCCAAGCT 487
||||| |||||| ||| || |||||
Sbjct 472 TCACACGTGGCGCCAGGTTCAAAGCT 497
> AT3G09750.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr3:2991655-2992679 REVERSE LENGTH=936
Length=936
Score = 222 bits (120), Expect = 5e-57
Identities = 315/402 (78%), Gaps = 42/402 (10%)
Strand=Plus/Plus
Query 15 AAGAAAGAGGAAGAAGACA-CGGTGGTCAACGCC-GCATTCGACTCCA-AACCCGTCACT 71
||| |||| | ||||| || | || ||| ||||| | ||| |||| || || |||||| |
Sbjct 129 AAG-AAGAAGCAGAAG-CAGCTGTCGTCGACGCCGGAATT-GACT-CATAATCCGTCAAT 184
Query 72 TCCCGATGATTTGCTATTG-AGCATCTTCGCACGCGTGTCAAGATTATAC--T-A-TC-C 125
|||| ||||||| ||| || | |||| ||||| || | ||||||| ||| | | || |
Sbjct 185 TCCCTATGATTTTCTAATGCA-CATCGTCGCATGCATCCCAAGATTGTACTATGAGTCTC 243
Query 126 T-ACTC-TCT-CACTCAGCTTTCGATCTCTCCTAGCTTCACCAGAGCTTTACAAGGCCAG 182
| |||| ||| || |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 244 TCACTCGTCTCCA-AGAGCTTTCGATCTCTCCTAGCTTCACCAGAGCTTTACAAGGTAAG 302
Query 183 GTCACTCTCGG-CAAACACCGAGAGTTGTCTCTATGTATGCTTACGGTGCTGTTC--TGG 239
||||| | || | ||| ||||||||||||||||| ||||| || | || |||
Sbjct 303 GTCACAGTTGGGCCG-CACAGAGAGTTGTCTCTATGTTTGCTT-CGATA-TGGAAAATGG 359
Query 240 T-TATCGCTGGTTCACCCTCTGCCGTAAACCTGATCAAACCATAACCAATAATAAGGAGA 298
| || |||||||||||||||||| |||| |||| ||||||||||| ||| |||||
Sbjct 360 TCTAAA-CTGGTTCACCCTCTGCCGGAAACTTGATAAAACCATAACCGGTAA---GGAGA 415
Query 299 GGAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCGGTGGTTCTCCTAATGTAC 358
| | | | |||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 416 G----T---G-G-TTATGCTTTGGCTAGAGTCCCAAT-CCCGCA--TTCTCCTAATGTAC 463
Query 359 GATCTTCGAGTCTCGTGGCCGTTGGTTCTGATATCTACAACA 400
||| ||||||||||||| | ||||| ||||||||||||||||
Sbjct 464 GATTTTCGAGTCTCGTG-CGGTTGGCTCTGATATCTACAACA 504
Score = 56.5 bits (30), Expect = 5e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Minus
Query 143 TTCGATCTCTCCTAGCTTCACCAGAGCTTT 172
||||||||||||||||||||||||||||||
Sbjct 737 TTCGATCTCTCCTAGCTTCACCAGAGCTTT 708
> AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing
F-box family | chr3:18484001-18484495 FORWARD LENGTH=495
Length=495
Score = 141 bits (76), Expect = 1e-32
Identities = 160/199 (80%), Gaps = 12/199 (6%)
Strand=Plus/Plus
Query 675 TTTT-ATGTTTTCAGA-TTCTTATTGCGAGATAGATAACGTTTTGTACTCT-TTATCCGA 731
|||| | |||||| || |||| |||| |||||||| ||||||||||||| | || | ||
Sbjct 30 TTTTCAAGTTTTC-GAGTTCTCATTGAGAGATAGACAACGTTTTGTACTGTGTT-TTTGA 87
Query 732 TGGAGCGTTCAGATGGTATGACACTGAGGTAAGAGAGTGGA-AAGATTTGAATGGTTTGT 790
|||||| | ||||||||||||| |||||||| ||||| | | |||||| |||| |
Sbjct 88 CGGAGCGATAAGATGGTATGACAAAAAGGTAAGATTGTGGAGACG-TTTGAAGGGTTAAT 146
Query 791 T--TCA-GCTGCCTAAGTTCTCTGCTAGTGCTTGTGTT-AGATTGGCTGATTATGGTGGA 846
| | | ||| ||||||||||| ||| || |||| || | |||||||||||||||||||
Sbjct 147 TGGTAAGGCTACCTAAGTTCTCACCTAATGTTTGTATTCA-ATTGGCTGATTATGGTGGA 205
Query 847 AAGATGGCGGTCTTGTGGG 865
||||||||||| |||||||
Sbjct 206 AAGATGGCGGTTTTGTGGG 224
> AT2G03460.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:1043621-1044992 REVERSE LENGTH=1280
Length=1280
Score = 124 bits (67), Expect = 1e-27
Identities = 198/258 (77%), Gaps = 21/258 (8%)
Strand=Plus/Plus
Query 618 GGTTGCTTACAATTCCAAGGAAGGTAGATGGGAT-TCCAAGG--AACTTGGGATGGGTGG 674
||||||||||||||||||||||||||||||||| | || ||| |||| |
Sbjct 746 GGTTGCTTACAATTCCAAGGAAGGTAGATGGGACATGGTTGGCCAACAA---ATGGATCA 802
Query 675 TTTTATGTTTTCAGATTCTTATTGCGAGATAGATAACGTTTTGTACTCTT-TA-TCCGAT 732
|| || |||||||| ||||| |||||||| | || ||||||||||||| || || ||
Sbjct 803 TTATAAGTTTTCAGCTTCTT---GCGAGATACAGAATGTTTTGTACTCTTGTACTC--AT 857
Query 733 GGAGCGTTCAGATGGTATGACACTGAGGTAA-GAGAGTGGAAAGATTTGAATGGTTTGTT 791
|||| ||||||||||||||||||| | | || || ||||| ||||||||| |||||| |
Sbjct 858 GGAGTGTTCAGATGGTATGACACTAACGCAATGAT-GTGGAGAGATTTGAAGGGTTTGGT 916
Query 792 TC-AGCTGCCTAAGTTCTCTGCTAGTGCTTGTGTTA-GATTGGCTGATTATGGTGGAAAG 849
| || |||| |||| | || |||| ||||| | |||||||||||||| |||||
Sbjct 917 AGGA-CTACCTATGTTCGGTTCTGGTGCCAATGTTAAG-TTGGCTGATTATGGAGGAAA- 973
Query 850 ATGG-CGGTCTTGTGGGA 866
|| |||| ||||||||
Sbjct 974 ATTAACGGTTTTGTGGGA 991
> AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:15475786-15476871 FORWARD LENGTH=876
Length=876
Score = 58.4 bits (31), Expect = 1e-07
Identities = 35/37 (95%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 614 GTGAGGTTGCTTACAATTCCAAGGAAGGTAGATGGGA 650
||| || ||||||||||||||||||||||||||||||
Sbjct 446 GTGTGGATGCTTACAATTCCAAGGAAGGTAGATGGGA 482
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51339298234
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5