BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg317726 Length=1521 Score E Sequences producing significant alignments: (Bits) Value AT3G09240.1 | Symbols: | Protein kinase protein with tetratric... 2276 0.0 AT5G01060.1 | Symbols: | Protein kinase protein with tetratric... 1146 0.0 > AT3G09240.1 | Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr3:2835668-2837956 REVERSE LENGTH=1434 Length=1434 Score = 2276 bits (1232), Expect = 0.0 Identities = 1344/1399 (96%), Gaps = 4/1399 (0%) Strand=Plus/Plus Query 125 ATAACAACGAAGAAGATGAAGGAAGTACTTGTCCGATTTTCCGGGAATTCAGCTTGGAAC 184 |||| || |||||||||||||||||||||||||| | ||||| ||| ||||||||||||| Sbjct 38 ATAATAAAGAAGAAGATGAAGGAAGTACTTGTCCTAATTTCCTGGAGTTCAGCTTGGAAC 97 Query 185 AGTTGAGAGTCGCAACTGACGGATTCTCCGCCGGCAACATCGTGTCGGAGCACAACGAGA 244 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 98 AGTTGAGAGTCGCAACTGACGGATTCTCCGCCGACAACATCGTGTCGGAGCACAACGAGA 157 Query 245 GGGTTCCTAACATCGTCTACAAAGGGAAGCTCAAAGACGGAAGAAAGATCGCCGTCAAAC 304 ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct 158 GGGTTCCTAACATCGTCTACAAAGGCCAGCTCAACGACGGAAGAAAGATCGCCGTCAAGC 217 Query 305 GGTTTCAAAGGCTTTCATGGCCTGATTCTTTCGAATTCACCGAAGAAGCACAAGCTGTTG 364 |||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||||| | Sbjct 218 GGTTTCAACGGCTTTCATGGCCTGATTCTTTAGAATTCATCGAGGAAGCACAAGCTGTAG 277 Query 365 GGAGGTGTAGGAGTGAGCATATGGCCAATTTGATCGGTTGTTGCTCAGAAGGTCACGAGA 424 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 278 GGAGATGTAGGAGTGAGCATATGGCCAATTTGATCGGTTGTTGCTCAGAAGGTCACGAGA 337 Query 425 GGTTGCTCGTTGCTGAGTACATGCCTAATGGAACACTTGCTAAGCATCTCTTTCACTGGG 484 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 338 GGTTGCTTGTTGCTGAGTACATGCCTAATGAAACACTTGCTAAGCATCTCTTTCACTGGG 397 Query 485 AGAAAAGACCAATGAAATGGGAAATGAGATTAAGGGTTGCGTTACATACTGCAACAGCCT 544 |||||||||||||||| ||||||||||| || || ||||||||||||||||||||||||| Sbjct 398 AGAAAAGACCAATGAAGTGGGAAATGAGGTTGAGAGTTGCGTTACATACTGCAACAGCCT 457 Query 545 TGGAGTACTGTAATGATAT-GGGAATAGATTTGTATCACGATCTTAACACCTACAGAATA 603 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 458 TGGAGTACTGTAATGAT-TGGGGAATAGATTTGTATCACGATCTTAACACCTACAGAATA 516 Query 604 TTGTTTGATAAGGTTGGGAATCCTAGGCTGTCTTGTTTCGGTCTCATGAAGTGTAGCCGA 663 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 517 TTGTTTGACAAGGTTGGGAATCCTAGGCTGTCTTGTTTTGGTCTCATGAAGTGTAGCCGA 576 Query 664 GAGGGAAAGAGCTATAGTACCAACTTGGCATTTGCTCCTCCTGAATATTTACGTCTAGGT 723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 577 GAGGGAAAGAGCTATAGTACCAACTTGGCATTTGCTCCTCCTGAATATTTACGTCTAGGT 636 Query 724 ACTGTGATACCGGAGAGTGTCACATTTAGCTTCGGGACCTTGTTACTGGATCTTATGAGC 783 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 637 ACTGTGATACCGGAGAGTGTCACATTTAGCTTCGGAACCTTGTTACTGGATCTTATGAGC 696 Query 784 GGCAGACATATTCCACCTAACCATGCACTTGATCTATTCCGTGGTAAAAACTATTTGGTG 843 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 697 GGCAGACATATTCCACCAAACCATGCACTTGATCTGTTCCGTGGTAAAAACTATTTGGTG 756 Query 844 CTAATGGATTCAGCTCTGGATGGTCAATTCTCTGATGAGGATAGAACAGAACTAATCCAT 903 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 757 CTAATGGATTCAGCTCTGGATGGTCAATTCTCTGATGAGGATAGAACAGAACTTATCCAT 816 Query 904 CTAGCTTCCCGCTGTTTCCGGCCTAAACCAGACGAGAGACCAAGTATAAAGTTTCTTATG 963 ||||||||||||||||| || ||| ||||||||||||| ||||| ||||||||||||||| Sbjct 817 CTAGCTTCCCGCTGTTTGCGCCCTGAACCAGACGAGAGGCCAAGCATAAAGTTTCTTATG 876 Query 964 TCTGCTCTTTCAAGACTTGAGAAACGAGCTGAGTTATGGCCCAACGTCAACGAAGAAAAC 1023 || ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 877 TCAGCTCTTTCAAGACTTGAGAAAAGAGCTGAGTTATGGCCCAACGTCAAAGAAGAAAAC 936 Query 1024 ATTCCTACTCCATCAGACACTAAACCTGCAACAAAGGAGCCATTGCGCTTGACCCCTTTC 1083 || |||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 937 ATCCCTACTCCATCATACACTGAACCTGCAACAAAGGAGCCATTGCCCTTGACCCCTTTC 996 Query 1084 GGAGAAGCATGCTGGAGAGTGGATCTGAGTGGTATACACGAACTACTCGAGAAACTCGGG 1143 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 997 GGAGAAGCATGCTGGAGAGTGGATCTAAGTGGTATGCACGAACTACTCGAGAAACTCGGG 1056 Query 1144 TATGGAGAGGATGATGTGGTGGTCACAAATGAGTTCTCATTCCAAATGTGGACGGGTCAA 1203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1057 TATGGAGAGGATGATGTGGTGGTCACAAATGAGTTCTCATTCCAAATGTGGACGGGTCAA 1116 Query 1204 ATGCAAGAGAATATGGATTACAAGAAGCATGGAGATGCCGCATTTCGTGCTAAAGATTTT 1263 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1117 ATGCAAGAGAATATGGATTACAAGAAGCACGGAGATGCCGCATTTCGTGCTAAAGATTTT 1176 Query 1264 GAAACAGCAATCGAATTTTACACAGAGTTCATGAGTGGAGCACCAGTGGTATCACCAACA 1323 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1177 GAAACCGCAATCGAATTCTACACAGAGTTCATGAGTGGAGCACCAGTGGTATCACCAACA 1236 Query 1324 GTATTAGCCAGACGGTGTCTATGTTACCTAATGAGCT-ATATGTTCCGCGAGGCTCTAAG 1382 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 1237 GTATTAGCCAGACGGTGTCTATGTTACCTAATGAG-TGATATGTTCCGCGAGGCTCTAAG 1295 Query 1383 TGATGCGATGCAAGCTCAGGTCGCATCGCCAGAGTTTTCAATCGCTCTCTACTTACAATC 1442 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 1296 TGATGCGATGCAAACTCAGGTCGCATCGCCAGAGTTTTCGATCGCTCTCTACTTACAAGC 1355 Query 1443 GGCTTGTCTTTTAAAGCTTGGAATGGAGGCTGAAGCTAAAGAAGCTCTTAGACATGGCTC 1502 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1356 AGCTTGTCTTTTAAAGCTTGGGATGGAGGCTGAAGCTAAAGAAGCTCTTAGACATGGCTC 1415 Query 1503 TTCTCTCGAAGCTTTTTAG 1521 ||||||||||||||||||| Sbjct 1416 TTCTCTCGAAGCTTTTTAG 1434 > AT5G01060.1 | Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr5:22740-24847 FORWARD LENGTH=1500 Length=1500 Score = 1146 bits (620), Expect = 0.0 Identities = 1153/1402 (82%), Gaps = 69/1402 (5%) Strand=Plus/Plus Query 159 GATTTTCCGGGAATTCAGCTTGGAACAGTTGAGAGTCGCAACTGACGGATTCTCCGCCGG 218 ||||||||| || ||||| || |||||| ||||| |||| || ||||| ||||||||||| Sbjct 129 GATTTTCCGTGAGTTCAGTTTAGAACAGCTGAGAATCGCCACCGACGGTTTCTCCGCCGG 188 Query 219 CAACATCGTGTCGGAGCACAACGAGAGGGTTCCTAACATCGTCTACAAAGGGAAGCTCAA 278 |||||||| |||||||||||||| ||| || ||||||||||||||||| || ||| Sbjct 189 AAACATCGTATCGGAGCACAACGATTCGGTACCAAACATCGTCTACAAAGGAAAACTCGG 248 Query 279 AGACGGAAGAAAG-ATCGCCGTCAAACGGTTTCAAAGGCTTTCATGGCCTGATTCTTTCG 337 || || | | ||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct 249 CGATGGTCG-TCGCATCGCCGTCAAACGGTTTCAAAGACTTTCTTGGCCTGATCCTTTCG 307 Query 338 AATTCACCGAA-GAAGCACAAGCTGTTGGGAG-GTGTAGGAGTGAGCATATGGCCAATTT 395 |||||| | || |||||||||||||||||||| || |||||||| |||||||| ||||| Sbjct 308 AATTCATC-AATGAAGCACAAGCTGTTGGGAGATTG-AGGAGTGAACATATGGCGAATTT 365 Query 396 GATCGGTTGTTGCTCAGAAGGTC-ACGAGAGGTTGCTCGTTGCTGAGTACATGCCTAATG 454 |||||||||||| | | | | | ||||||| || || ||||||||||| |||||||||| Sbjct 366 GATCGGTTGTTGTTGTG-ATGACAACGAGAGATTACTTGTTGCTGAGTATATGCCTAATG 424 Query 455 GAACACTT-GCTAAGCATCTCTTTCACTGGGAGAAAAGACCAATGAAATGGGAAATGAGA 513 ||||| || || || ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 425 GAACA-TTAGCAAAACATCTTTTTCACTGGGAGAAAAGACCCATGAAATGGGAAATGAGG 483 Query 514 TT-AAGGGTTGCGT-TACATACTGCAACAGCCTTGGAGTACTGTAATGATATGGGAATAG 571 || || ||||| | | |||||||||| ||| |||||||| |||||||||| ||||| | Sbjct 484 TTGAA-AGTTGC-TCTGCATACTGCAAGAGCTTTGGAGTATTGTAATGATAAAGGAATTG 541 Query 572 ATTTGTATCACGATCTTAACACC-TACA-GAATATTGTTTGATAAGGTTGGGAATCCTAG 629 |||| || || |||||||| || |||| || || ||||||||||| |||| ||||| Sbjct 542 ATTTATACCATGATCTTAA-TCCTTACAGGATTA-TGTTTGATAAGACAGGGATTCCTAA 599 Query 630 GCTGTCTTG-TTTCGGTCTCATGAAGTGTAGCCGA-G-AGGGAAAGAGCTATAGTACCAA 686 ||| ||||| ||| |||||||||||| ||||| | | |||| |||| ||||| ||||| Sbjct 600 GCTTTCTTGCTTT-GGTCTCATGAAGAATAGCC-ATGAAGGG-AAGATTTATAGCACCAA 656 Query 687 CTTGGCATTTGCTCCTCCTGAATATTTACGTCTAGGTACTGTGATACCGGAGAGTGTCAC 746 ||| || ||||||||||| || ||||| || || |||||||||||| ||||||| ||||| Sbjct 657 CTTAGCTTTTGCTCCTCCCGAGTATTTGCGCCTTGGTACTGTGATAGCGGAGAGCGTCAC 716 Query 747 ATTTAGCTTCGGGACCTTGTTACTGGATCTTATGAGCGGCAGACATATTCCACCTAACCA 806 ||||||||| || ||||||||| |||||||||||||||||||||||||||| || ||||| Sbjct 717 ATTTAGCTTTGGAACCTTGTTATTGGATCTTATGAGCGGCAGACATATTCCTCCAAACCA 776 Query 807 TGCACTTGATCTATTCCGTGGTAAAAACTATTTGGTGCTAATGGATTCAGCTCTGGATGG 866 |||||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 777 TGCACTTGATTTGTTCCGTGGCAAAAACTATTTGGTGCTAATGGATTCAGCTCTTGATGG 836 Query 867 TCAATTCTCTGATGAGGATAGAACAGAACTAATCCATC-TAGCTTCCCGCTGTTTCCGGC 925 ||| ||||||||||| || || ||||||||||| || | ||||||| || |||||| | Sbjct 837 TCAGTTCTCTGATGAAGACAGGACAGAACTAATACA-CGTAGCTTCTCGATGTTTCAAGA 895 Query 926 CTAAACCAGACGAGAGACCAAGTATAAAGTTTCTTATGTCTG-CTCTTTCAAGACTTGAG 984 || ||||||| ||||| ||||||||||||||||||| | | | ||||||| |||||| || Sbjct 896 CTGAACCAGAAGAGAGGCCAAGTATAAAGTTTCTTAAGGC-GACTCTTTCTAGACTTCAG 954 Query 985 AAACGAGCTGAGTTATGGCCC-A--AC-GTCAACGAAGAAA-ACAT-TCCTAC-TCCA-- 1035 ||||| || |||| || ||| | | ||||| |||| | | |||| | || | Sbjct 955 AAACGGGCCAAGTTGTG-CCCTATTAATGTCAA--AAGACCTATGTCTCCTCCATCAAAA 1011 Query 1036 --TCAGAC--A-----CTAAACCTGCAACAAAGGAGCCATTGC-GCTTGACCCCTTTCGG 1085 || | | | |||||||||||||| | || ||||| | ||||| |||||||| Sbjct 1012 AATCTGCCTGAAAAGACTAAACCTGCAACA--G-AGTCATTGAAG-TTGACTCCTTTCGG 1067 Query 1086 AGAAGCATGCTGGAGAGTGGATCTGAGTGGTATACACGAACTACTCGAGAAACTCGGGTA 1145 ||| ||||| | |||| |||||| ||| ||||||| |||||||| |||||||| ||||| Sbjct 1068 AGATGCATGTTCTAGAGCGGATCTAAGTAGTATACATGAACTACTAGAGAAACTAGGGTA 1127 Query 1146 TGGAGAGGATGATGTGGT-GGTCACAAATGAGTTCTCATTCCAAATGTGGACGGGTC-AA 1203 || ||| ||| ||| ||| ||| || ||||| ||||||||||||||||| || | || Sbjct 1128 TGAAGAAGATAATGGGGTTGGTAAC----GAGTTTTCATTCCAAATGTGGACCGG-CGAA 1182 Query 1204 ATGCAAGAGAATATGGATTACAAGAAGCATGGAGATGCCGCATTTCGTGCTAAAGATTTT 1263 ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||| Sbjct 1183 ATGCAAGAGAATATGGACTACAAGAAGCATGGAGATGCCGCGTTTCTTGCGAAAGATTTT 1242 Query 1264 GAAACAGCAATCGAATTTTACACAGAGTTCATGAGTGGAGCACC-AGTGGTATCACCAAC 1322 || || || || ||||| |||||||||||||||| |||||| || | |||||||||||| Sbjct 1243 GATACTGCCATTGAATTCTACACAGAGTTCATGACTGGAGCTCCTAC-GGTATCACCAAC 1301 Query 1323 AGTATTAGCCAGACGGTGTCTATGTTACCTAATGAGCT-ATATGTTCCGCGAGGCTCTAA 1381 |||||| || ||| ||||||| ||||||||||||| || | |||||| |||||||||||| Sbjct 1302 AGTATTGGCAAGAAGGTGTCTTTGTTACCTAATGA-CTGAAATGTTCAGCGAGGCTCTAA 1360 Query 1382 GTGATGCGATGCAAGCTCAGGTCGCATCGCCAGAGTTTTCAAT-CGCTCTCTACTTACAA 1440 | |||||||||||||| || || || || || || | |||| | |||| ||||||||| Sbjct 1361 GCGATGCGATGCAAGCGCAAGTAGCTTCACCGGAATGGCCAATTC-CTCTTTACTTACAA 1419 Query 1441 TCGGCTTGTCTTTTAAAGCTTG-GAATGGAGGCTGAAGCTAAAGAAGCTCTTAGACATGG 1499 |||||||||| || ||||| | || |||| ||||||||||||||||| ||||||||||| Sbjct 1420 GCGGCTTGTCTCTTCAAGCTAGAGA-TGGAAGCTGAAGCTAAAGAAGCACTTAGACATGG 1478 Query 1500 CTCTTCTCTCGAAGCTTTTTAG 1521 ||| |||| || |||| |||| Sbjct 1479 TTCTGCTCTTGAGGCTTATTAG 1500 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75049814775 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5