BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317739
Length=1803
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09360.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein ... 2760 0.0
AT2G45100.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein ... 918 0.0
AT2G01280.1 | Symbols: MEE65 | Cyclin/Brf1-like TBP-binding pro... 569 2e-161
> AT3G09360.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein
| chr3:2873449-2878591 FORWARD LENGTH=2188
Length=2188
Score = 2760 bits (1494), Expect = 0.0
Identities = 1711/1816 (94%), Gaps = 14/1816 (1%)
Strand=Plus/Plus
Query 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 274
Query 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct 275 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTACCGAAGTTACA 334
Query 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGAGCAGTGTTCAA 180
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 335 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCAA 394
Query 181 AGTGGGATTCCAAGCTCACGTGAAAGGAGATATAGAATAGCTAGAGATGAGTTTACGAAT 240
||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 395 AGTGGGATTACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTTATGAAT 454
Query 241 TTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTTCTA 300
|||| |||||||||||| |||||||||||||||| ||||||||||| ||| || | | |
Sbjct 455 TTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTAAA 514
Query 301 TTCTTT-AAATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAGAACTGAACTAGTACA 359
|||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 515 TTCTTTGAAAT-GGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAACTGAACTAGTACA 573
Query 360 GGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTCCGTTTCTTCTTATTGATTT 419
||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||
Sbjct 574 GGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACATTGCGTTGCTTCTTATTGATTT 633
Query 420 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGA 479
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 634 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTCTGTGA 693
Query 480 AATGCTGTACATTGCGGATAATCAAAATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT 539
|||||||||| ||| ||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct 694 AATGCTGTACCTTGTGGAAAATCGGAATTATGAAAAGCTTGTTGATCCTTCAATTTTCAT 753
Query 540 CGATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCTGTTGTGAAAACAGC 599
|||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||
Sbjct 754 GGATCGATTCTCAAACAGCTTATTGAAAGGAAAAAATAATAAAGATGTTGTGGCAACAGC 813
Query 600 TATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 659
|| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 814 TAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 873
Query 660 AATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTAAGTC 719
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 874 AATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCATGGTATCAAGTGCTCTAAGAC 933
Query 720 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATTGAGTT 779
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 934 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTCACCAAACGATTGATTGAGTT 993
Query 780 TGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCACAGAAAGAGAATCTCATAA 839
||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| |||||
Sbjct 994 TGGCGATACGGATTCTGGAAATTTAAATGTTAATGAGCTCAGAGAAAGAGAATCGCATAA 1053
Query 840 AAGATCTTCTACCATGAAACCAACCTCAAACAAAGAGGCGGTGCTCTGTATGCATCAGGA 899
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1054 AAGATCTTTTACCATGAAACCAACCTCAAATAAAGAGGCGGTGCTCTGTATGCATCAGGA 1113
Query 900 TAGTAAACCTTTTGGTTATGGACTATGTAAAGACTGCTACGAAGATTTCATAAATGTTTC 959
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1114 TAGTAAACCTTTTGGTTATGGACTATGTGAAGACTGCTACAAAGATTTCATAAATGTTTC 1173
Query 960 TGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTTTCCAGCGCGCAGAGAATGAGCGAAT 1019
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 1174 TGGTGGACTTGTTGGTGGGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAAT 1233
Query 1020 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1293
Query 1080 ACTATATTCAGACTATTGCAGTATGAGCAAAAGCGAAAAACAATTTTCTGAGAAAGGTGa 1139
||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||
Sbjct 1294 ACTATATTCAGACTATTGCAGTATGAGCAAAAGGGGAAAACAATGTTCTGAGAAAGGTGA 1353
Query 1140 aaaaaaTAAAGATGGGGATGAAGAACATGCTGATACTTCGGATGAATCTGACAACTTTTC 1199
|||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1354 AAAAGATAAAGATGGGGCTGAAGAACATGCTGATACTTCGGATGAATCAGACAACTTTTC 1413
Query 1200 TGACATCAGTGATGATGAGGTAGATGGCTATATCAACAACGAGGAGGAAACGCACTATAA 1259
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1414 TGACATCAGTGATGATGAGGTAAATGGCTATATCAACAACGAGGAGGAAACGCACTATAA 1473
Query 1260 GACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGCCGCTAAGGAAGC 1319
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1474 GACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGCTGCTAAGGAAGC 1533
Query 1320 AGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTGCCCAGAAGATGC 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534 AGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTGCCCAGAAGATGC 1593
Query 1380 AAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAAGGAAAAGCAACa 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 AAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAAGGAAAAGCAACA 1653
Query 1440 aaaaaaaGCTGAGGAAGCAAAGAACGCGGCTCCCCCAGCCACAGCAATGGAAGCGGTTCG 1499
||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||
Sbjct 1654 AAAAAAAGCTGAGGAAGCAAAGAACGCGGCTCCTCCAGCCACAGCAGTGGAGGCGGTACG 1713
Query 1500 CCGAACGCTTGAGAAAAAGAGACTAAGTTTGGTGATCAATTACGATGTTTTGGAGGAGCT 1559
|||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||| |||
Sbjct 1714 CCGAACGCTTGATAAAAAGAGACTTAGTTCGGTGATCAACTACGATGTTTTGGAGTCGCT 1773
Query 1560 ATTTGATACATCCACAGCTGAGAAATCACCCAAGAGGGCGAAAACCGAGACAGACATtga 1619
||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 1774 ATTTGATACATCCGCACCTGAGAAATCACCCAAGAGGTCGAAAACAGAGACAGACATTGA 1833
Query 1620 gaagaagaaggaag------------tgaagagcaatgaacatgagaaaggtgaaaatga 1667
|||||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct 1834 GAAGAAGAAGGAAGAGAACAAGGAAATGAAGAGTAATGAACATGAGAATGGTGAAAATGA 1893
Query 1668 agatgaagctgaagaggatgaagaagaagGCAGTGTAGAATCATACGACATGAACACAGA 1727
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1894 AGATGAAGATGAAGAGGATGAAGAAGAAGGCAATGTAGAATCATACGACATGAAGACAGA 1953
Query 1728 TTTTCAAAACGGGGAGAAATTCTATGAAGAGGACGAGGGAGAAGAAGAGGATGGTAATGA 1787
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1954 TTTTCAAAACGGCGAGAAATTCTATGAAGAGGACGAGGAAGAAGAAGAGGATGGTAATGA 2013
Query 1788 CTTTGGATTGTATTGA 1803
|||||||||||||||
Sbjct 2014 TTTTGGATTGTATTGA 2029
> AT2G45100.1 | Symbols: | Cyclin/Brf1-like TBP-binding protein
| chr2:18595348-18598438 REVERSE LENGTH=1820
Length=1820
Score = 918 bits (497), Expect = 0.0
Identities = 896/1082 (83%), Gaps = 54/1082 (5%)
Strand=Plus/Plus
Query 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
|||||||||||||| || || | |||||| ||||||||||||||||| ||||||| ||||
Sbjct 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGCTGCA 206
Query 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
||| ||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct 207 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTACA 266
Query 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGA-GCAGTGTTCA 179
|||||||||||||||||||||||||||||||| || ||||||||| | | | ||||||||
Sbjct 267 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAG-AGTGTTCA 325
Query 180 AAGTGGGAT-TCCAAGCTCACGTGAAAGGAGATAT-AGAATAGCTAGAGATGAGTTTACG 237
||||| || || ||||||||||||||||| | || |||| ||||| |||||| ||| |
Sbjct 326 GAGTGGCATGTC-AAGCTCACGTGAAAGGATA-ATCAGAAAAGCTACTGATGAGCTTATG 383
Query 238 AATTTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTT 297
|||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||||| |
Sbjct 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-T- 441
Query 298 CTA-TT-CTTTA-AATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAG-AACTGAACT 353
||| || ||||| ||| | || |||| || ||||||||||||||||| || || |||||
Sbjct 442 CTAATTTCTTTAGAATTG-CACTTGATCATAATTTCACTAAAGGCCGTAGCAAA-GAACT 499
Query 354 AGTACAGGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTC-CGTTTCTTCTTA 412
|||| |||| ||||||||||||||||||||| |||| || || || |||||||||
Sbjct 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCAGGCAATTCAAA-TTGGCGGTTCTTCTTA 558
Query 413 TTGATTTCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAAC 472
||||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
Query 473 TCTGTGAAATGCTGTACATTGCGGATAATCAAAATTATGA-AAAGCTTGTTGACCCTTCA 531
||||||| ||||| |||||| | || || || || ||||| ||| |||||||| ||||||
Sbjct 619 TCTGTGACATGCTCTACATTACAGAAAACCACAACTATGAGAAA-CTTGTTGATCCTTCA 677
Query 532 ATTTTCAT-CGATCGATTCTCAAACATCTTATTGAAAGGA--ACACA-TAATAAAGCTGT 587
|||||||| | ||||||||||||||| ||||||||||| ||||| ||||||| ||
Sbjct 678 ATTTTCATTCC-TCGATTCTCAAACATGTTATTGAAAGGTGCACACAATAATAAA-CTC- 734
Query 588 TGTGAAAACAGCTATAGC-CATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCC 646
||| ||| |||| | | ||||||||||||||||||| |||||||||| |||||||| |
Sbjct 735 -GTGCTAACGGCTACA-CACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 792
Query 647 GGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCA 706
|||| || ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 793 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 852
Query 707 AGTGCTCTAAGTCAGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAAC 766
||||||| ||| ||||||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 853 AGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAA 912
Query 767 GATTGATTGAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCAC-A--- 822
||||||||||||||||| |||| ||| ||| || ||| | || |||||| ||| |
Sbjct 913 GATTGATTGAGTTTGGAGATACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAA 972
Query 823 --GAAAGAGAATCTCATAAAAGA-T-C-TT-C----TACCATGAAACCAACCTCAAACAA 872
||||||||| | ||| | | | || | || | ||| |||| | ||||
Sbjct 973 CTGAAAGAGAAAA--AGAAACGGCTGCATTGCGAAGTAAAAGGAAGCCAAATTTTTACAA 1030
Query 873 AGA-GGCG--GTGCTCTGTATGCATCAGGATAGTAAACCTTTTGGTTATGGACTATGTAA 929
||| || | ||||||||||||||||| ||| |||||||| ||| ||||||| ||||| |
Sbjct 1031 AGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTGA 1090
Query 930 -AGACTGCTACGAAGATTTCATAA-ATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCT 987
|| ||| ||||| || ||||| | | |||||||||||||||| |||||||| || |||
Sbjct 1091 GAG-CTGTTACGATGAATTCATGACA-GTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1148
Query 988 CCTGCTTTCCAGCGCGCAGAGAATGAGCGAATGGA--AAAA-GCAGCTAGAGAAGAAAAC 1044
|| || |||||||| |||||||| ||| ||||||| |||| || |||| |||||||||
Sbjct 1149 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAAC 1208
Query 1045 GA 1046
||
Sbjct 1209 GA 1210
> AT2G01280.1 | Symbols: MEE65 | Cyclin/Brf1-like TBP-binding protein
| chr2:145676-149394 FORWARD LENGTH=2257
Length=2257
Score = 569 bits (308), Expect = 2e-161
Identities = 750/951 (79%), Gaps = 79/951 (8%)
Strand=Plus/Plus
Query 424 AGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGAAATG 483
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 370 AGCTACCTTCGAGTTAGCGTTTACGAGTTAGGTTCCGTGTACTTGCAACTCTGTGAAATG 429
Query 484 CTGTACATTGCGGATAATCAA-AATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT-CG 541
|||||| ||| | | || ||| || ||||| |||||||||| |||||||| ||||| |
Sbjct 430 CTGTACCTTGTGCAAAA-CAAGAACTATGAGGAGCTTGTTGATCCTTCAATCTTCATTCC 488
Query 542 ATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCT---GTTGT-GAAAACA 597
||||||| |||||| |||||||||||| |||| |||||| | ||| | |||||
Sbjct 489 -TCGATTCACAAACAGCTTATTGAAAGGTGCACACGCTAAAGCAAAAGATGTCGCAAACA 547
Query 598 -G-CTATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTA 655
| ||| | ||||||| ||||||||||| |||||||||||||||| |||||||| || |
Sbjct 548 CGGCTAAAAACATTATATCTAGTATGAAGAGAGATTGGATACAGACAGGCCGGAAACCAA 607
Query 656 GTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTA 715
|||||||||||||||||||| |||||| ||||| |||||||||||||||| || |||||
Sbjct 608 GTGGAATATGTGGAGCAGCAATTTACATGGCTGCACTTTCTCATGGTATCATGTACTCTA 667
Query 716 AGTCAGATATTGTAAACA-TTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATT 774
| |||| |||| ||| | |||||||||| ||||||||||| |||||||| |||||| |
Sbjct 668 GGGCAGACATTGCAAA-AGTTGTGCATATGTGTGAAGCAACAATAACCAAAAGATTGAAT 726
Query 775 GAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAG----ATCACAGA-AAGAG 829
|| |||| ||||| ||| |||||| ||||| |||||||||| || | || |||||
Sbjct 727 GAATTTGCTAATACCGAGGCTGGAAGTTTAACTGTTGATGAGCTTGATGAAAGCGAAGAG 786
Query 830 A-ATCT-CATAAA-AGATCTTCTACCATGAA-ACCAACCTCAAACAAAG-AGGCGGTGCT 884
| || | | |||| | | ||| |||| || ||||| || |||||| || | ||
Sbjct 787 ATAT-TGCGTAAAGAAA-CTTTTACCCC-AAGACCAAATTCTGACAAAGGAGTAG-TGAA 842
Query 885 CTGTATGCATCAGGATAGTAAA-C-CTTTTGGTTATGGACTATGTAA-AGACTG-CTACG 940
||||| ||| ||||| |||| | |||| ||||||||| ||||||| || ||| | |||
Sbjct 843 CTGTAAACATAAGGATT-TAAAACGCTTT-GGTTATGGATTATGTAAGAG-CTGTC-ACG 898
Query 941 AAGATTTCAT-A-AATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTT-TCC 997
| |||||||| | ||| || |||||||| ||||||||||||| || |||||||||| ||
Sbjct 899 ACGATTTCATTATAAT-TT-CTGGTGGAGTTGTTGGTGGGTCGGATCCTCCTGCTTATC- 955
Query 998 AGCGCGCAGAGAATGAGCGAATGGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTA 1057
|||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 956 AGCGAGCAGAGAAAGAGAGAATGGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTG 1015
Query 1058 GTAGCCTAAACCACGATGAACAACTATATTCAGACTATTGCAGTATGAGCAAAAGCG-AA 1116
||| | ||||||||||||||||| | || | | | || |||||||| | ||
Sbjct 1016 GTAACTTAAACCACGATGAACAAGT-TA---A---T---G---TA--AGCAAAAGGGCAA 1060
Query 1117 AAACAATTTTCTGAGAAAGGTGaaaaaaaTAA-AGATGGGGATGAA-GAACATGCTGA-T 1173
||| ||| ||| |||||||| ||| | | || | |||||| |||| || |||||||| |
Sbjct 1061 AAA-AATGTTCGGAGAAAGGCGAAGGAGA-AACATATGGGGGTGAAAGA-CATGCTGAAT 1117
Query 1174 ACTTCGGATGAATCTGACAACTTTTCTGAC-ATC-AGTGATGATGAGGTAGA---TGGCT 1228
| |||||||||||| |||| || ||| ||| | | | |||| |||||| || || |
Sbjct 1118 A-TTCGGATGAATCAGACATCTGTTCGGACGA-CGA-TGATTCTGAGGTGGAACATGT-T 1173
Query 1229 ATATCAACAACGAGGAGGAAACGCACTAT-AAGACGATCA-CATGGACAGAAATGAA-CA 1285
| || | ||||| ||||||| | | ||||| | | | |||| | | || ||
Sbjct 1174 CT-TCT-CGGTGAGGACGAAACGCGGT-TGAAGACAA-CGGCCTGGA-ATTTACAAAACA 1228
Query 1286 AAGATTATCTTGAGGAGCAAGCCGCTAAGGAAGCAGCTCTGAAGGCGGCTA 1336
|||| ||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct 1229 AAGACTATCTTGAGGAGCAAGCAGAAAAGGAAGCAGCTCTGAAGGCTGCTA 1279
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89206368465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5