BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317764
Length=2793
Score E
Sequences producing significant alignments: (Bits) Value
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosp... 3022 0.0
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosp... 1498 0.0
> AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=2970
Length=2970
Score = 3022 bits (1636), Expect = 0.0
Identities = 1963/2122 (93%), Gaps = 17/2122 (1%)
Strand=Plus/Plus
Query 682 GAAACTGGTGACC-AG-CAAAAGGAAGGTTTGAATAA-G--TCCCTTGGTAGGATAATTC 736
||||||||||||| || ||||| ||||||| ||||| | ||||||||||||||||||
Sbjct 856 GAAACTGGTGACCAAGCCAAAA--AAGGTTTTAATAAGGCCGCCCTTGGTAGGATAATTC 913
Query 737 AAGGTGAAGATTCTGATTCTGATTATTCACAATCAAAGAGTGATGATGATCCAAGTTTAG 796
||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||
Sbjct 914 AAGGTGAAGATTCTGATTCAGATTACTCAGAACCAAAGAGTGATGATGATCCAAGTTTAG 973
Query 797 ACGAAGATGATGAGGAGTTCATGAAGAGAGTGAAGAAGACAAAAGCAGAAAAATTGTCTC 856
||||||| || |||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 974 ACGAAGACGACGAGGAGTTTATGAAGAGAGTTAAGAAGACAAAAGCAGAGAAATTGTCTC 1033
Query 857 TTGTTGACCACTCCAAAATAGAGTATGAACCTTTCCGGAAGAACTTCTATATCGAAGTCA 916
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1034 TTGTTGACCACTCCAAAATAGAGTATGAACCTTTCCGGAAGAATTTTTATATCGAAGTCA 1093
Query 917 AGGATATCTCAAGAATGACACAGGATGTAGTTAACGCTTACAGAAAGGAATTGGAGCTGA 976
||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||
Sbjct 1094 AGGATATCTCAAGGATGACACAGGATGCAGTGAACGCTTATAGAAAGGAATTGGAGCTGA 1153
Query 977 AAGTTCATGGGAAAGATGTACCAAGACCCA-TCAAAGCTTGGCACCAGACTGGACTAACT 1035
||||||||||||||||||| |||||||||| || || |||||||||||||||| |||||
Sbjct 1154 AAGTTCATGGGAAAGATGTTCCAAGACCCATTC-AATTTTGGCACCAGACTGGATTAACT 1212
Query 1036 AGCAAAATTTTGGATACTCTAAAGAAGCTTAACTATGTAAAGCCAATGCCTATCCAAGCA 1095
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 1213 AGCAAAATTTTGGATACTCTGAAGAAGCTTAACTATGAAAAGCCAATGCCTATCCAAGCA 1272
Query 1096 CAAGCACTCCCAATCATCATGAGCGGTCGAGACTGCATTGGGATTG-CAAACACCGGGTC 1154
|||||||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||||
Sbjct 1273 CAAGCACTTCCAATCATCATGAGCGGTAGAGACTGCATTGGGGTTGCCAAA-ACCGGGTC 1331
Query 1155 AGGTAAAACCCTTGCCTTTGTTTTGCCTATGTTGAGGCATATCAAAGATCAGCCTCCCAT 1214
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1332 AGGTAAAACCCTTGGCTTTGTTTTGCCTATGTTGAGGCATATCAAAGATCAGCCTCCCGT 1391
Query 1215 TGAAGCTGGTGATGGGCCGATTGGGCTTGTAATGGCACCTACTAGGGAGCTTGTTCAGCA 1274
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1392 TGAAGCTGGTGATGGGCCGATTGGGCTTGTAATGGCACCTACTAGAGAACTTGTTCAGCA 1451
Query 1275 GATTCACAGCGATATCA-AAAGGTTTGCTAAGGCATTGGGTGTAAGATGTGTAG-CTGTG 1332
|||| |||||||||||| ||| |||| |||||||||||||| ||| |||||| | |||||
Sbjct 1452 GATTTACAGCGATATCAGAAA-GTTTTCTAAGGCATTGGGTATAATATGTGT-GCCTGTG 1509
Query 1333 TATGGAGGATCAGGAGTTGCCCAGCAAATCAATGAGCTTAAGCGAGGTACTGAGATTGTT 1392
||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1510 TATGGAGGATCTGGAGTTGCCCAGCAAATCAGTGAGCTTAAGCGAGGTACCGAGATTGTT 1569
Query 1393 GTGTGCACTCCTGGCAGAATGATCGATGTTCTTTGCACAAGCAGTGGAAAAATCACCAAT 1452
|| || |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1570 GTTTGTACTCCTGGAAGAATGATCGATATTCTTTGCACAAGCAGTGGAAAAATTACCAAT 1629
Query 1453 CTGCGAAGGGTCACATATTTGGTAATGGATGAAGCTGATCGTATGTTTGACATGGGTTTT 1512
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1630 CTACGAAGGGTCACATATTTGGTAATGGATGAAGCTGATCGTATGTTTGATATGGGTTTT 1689
Query 1513 GAGCCTCAAATAACTCGTATTGTTCAAAATATTCGACCTGATCGTCAAACTGTGCTCTTT 1572
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 GAGCCTCAAATAACTCGCATTGTTCAAAATATTCGACCTGATCGTCAAACTGTGCTCTTT 1749
Query 1573 TCTGCCACTTTTCCACGCCAAGTTGAAACTTTGGCACGCAAAGTCGTGGACAAACCTGTG 1632
|||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||
Sbjct 1750 TCTGCCACTTTTCCACGCCAAGTTGAAACTTTGGCACGTAAAGTCTTGAACAAGCCTGTG 1809
Query 1633 GAAATACAAGTTGGTGGAAGGAGTGTTGTGAATAAAGATATAATTCAGTTAGTTGAAATC 1692
|| ||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1810 GAGATACAGGTCGGTGGGAGGAGTGTTGTGAATAAAGATATAACTCAGTTAGTTGAAATC 1869
Query 1693 AGACCGGAGAGTGAGAGGTTCTCAAGACTTCTGGAACTTCTTGGGGAATGGTATGAAAAA 1752
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1870 AGACCCGAGAGTGAGAGGTTCTCAAGACTTCTGGAACTTCTTGGGGAATGGTATGAGAAA 1929
Query 1753 GGAAAAGTTTTGGTGTTTTTTCGTTCGCAGGAAAAATCTTTATCTGAATTTAAGAACAAT 1812
|||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||| | ||
Sbjct 1930 GGAAAAGTTTTGGTCTTTGTTCGTTCGCAGGAAAAATCTATATCTGATTTTAAGAGCGAT 1989
Query 1813 GTCTGCAATTTGTTGATTGCAACAAGTGTTGCAGCGAGGGGTCTAGATGTGAAAGAGCTT 1872
||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 1990 GTCTGCAATTTGTTGATCGCCACAAGTGTTGCAGCCAGGGGTCTAGATGTGAAAGAGCTC 2049
Query 1873 GAGTTGGTTGTAAACTTTGATCCGCCGAACCACTATGAAGACTATGTGCATCGTGTTGGC 1932
||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||||
Sbjct 2050 GAGTTGGTTGTAAACTTCGATGCACCAAACCACTATGAAGACTATGTGCATCGTGTTGGT 2109
Query 1933 AGGACTGGTAGGGCAGGGCGGAAAGGCTGTGCTGTAACATTTATCTCCGAGGATGATGCA 1992
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2110 AGGACAGGTAGGGCAGGGCGGAAAGGCTGTGCTGTAACATTTATCTCTGAGGATGATGCA 2169
Query 1993 AAATATGCACCAGATTTAGTCAAGGCCCTGGAACTATCTGAGCAGCCAGTTCCTGATGAT 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2170 AAATATGCACCAGATTTAGTCAAGGCCCTGGAACTATCTGAGCAGCCAGTTCCTGATGAT 2229
Query 2053 GTGAAAGCAGTAGCTGATGGATTCATGGCGAAAGTAAAACAGGGTACTGAGCAAGCTCAT 2112
|| ||||||||||| || || ||||||||||||||||||||||||| |||||||||||||
Sbjct 2230 GTTAAAGCAGTAGCCGAAGGGTTCATGGCGAAAGTAAAACAGGGTATTGAGCAAGCTCAT 2289
Query 2113 GGAACTGGCTATGGTGGTAGTGGCTTTAAATTTAACGAAGACGATGAAGAAGTTAGGAAG 2172
||||||||||||||||| |||||||||||||| |||||||| || || |||||||||||
Sbjct 2290 GGAACTGGCTATGGTGGAAGTGGCTTTAAATTCAACGAAGAGGAGGATGAAGTTAGGAAA 2349
Query 2173 GCAGCAAAGAAAGTACAAGCGAAGGAGTATGGCTTTGAGGAAGAGGAGTCTGACTCAGAA 2232
||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 2350 GCAGCAAAGAAAGCACAAGCGAAGGAGTATGGCTTTGAAGAAGAGAAGTCTGACTCAGAA 2409
Query 2233 GATGAGAATGATGTAGTAAGAAACGCTGGTGATGATATCTCACAGCAGCAGGCTCCTTTT 2292
||||||||||||||||||||||| ||||||| ||||||||||||||||||| | || ||
Sbjct 2410 GATGAGAATGATGTAGTAAGAAAGGCTGGTGGTGATATCTCACAGCAGCAGATTACTCTT 2469
Query 2293 GCTCAGATAGCCGCCATTTCTGCTGCTGCTTCTAACGCGCCTGTGACTGCTAACCAATTG 2352
|||||||||||||||||| || ||||||||||||| || |||||||||||||||||||||
Sbjct 2470 GCTCAGATAGCCGCCATTGCTTCTGCTGCTTCTAAGGCTCCTGTGACTGCTAACCAATTG 2529
Query 2353 CCTCCAAACGGTGGTGGGCTAGCCACCGAGCCAGGTGTCCCTCCTACTGATGGATCAGGC 2412
| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct 2530 CTTCCAAATGGTGGTGGGCTAGCCACTGAGCCAGGTATCCCTCCTACTGATGGAGCAGGC 2589
Query 2413 CGCACTGCAGCCCTGGTTGCTGCCGCTAACTTGCAACATTACCTTGCAAGGATTCAAGCT 2472
||| ||||||| || ||||||| |||||| ||||||| |||||||||| ||||||||||
Sbjct 2590 CGCGTTGCAGCCATGATTGCTGCTGCTAACGTGCAACAGTACCTTGCAAAGATTCAAGCT 2649
Query 2473 GATGCGATGCCTGAACACTATGAAGCAGAATTGGAAATCAATGATTTTCCACCGAATACT 2532
|||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| ||
Sbjct 2650 GATGCGATACCTGAACACTATGAAGCAGAATTGGAAATCAATGATTTCCCACAGAATGCT 2709
Query 2533 CTGTGGAAAGTGACCCGCAAAGAAACGCTAGGTCCAATATCAGAGTGGAGTGGAGCCGCC 2592
| ||||||||| |||| |||||||||||| || ||||||||||||||||||||||| ||
Sbjct 2710 CGGTGGAAAGTTACCCACAAAGAAACGCTGGGACCAATATCAGAGTGGAGTGGAGCTTCC 2769
Query 2593 ATTACCACTAGAGGTAAGTGGTGTGATGCAGGACTTATCCCGGGACCTGGGGAACGCAAA 2652
||||||||||||||||||| | ||| ||||||| |||||||||||||| |||||||||
Sbjct 2770 ATTACCACTAGAGGTAAGTTTTATGAGGCAGGACGTATCCCGGGACCTGAGGAACGCAAG 2829
Query 2653 CTCTACTTGTTCATTGAAGGGCCTACC-AAAGAATCTGTTAAGACAGCGAAAGCCGAACT 2711
||||| |||||| | |||||||||||| ||| | |||||||||||||||||||| |||||
Sbjct 2830 CTCTATTTGTTCGTCGAAGGGCCTACCGAAATA-TCTGTTAAGACAGCGAAAGCTGAACT 2888
Query 2712 GAAGCGTGTTCTTGAAGACATAACTAATCAAGCCTTTTCCCTTCCTGGACGAGCACAACC 2771
|||||||||||||||||||||||||| ||| |||| |||||||||||| |||||||| |
Sbjct 2889 CAAGCGTGTTCTTGAAGACATAACTAACCAAACCTTCTCCCTTCCTGGAGGAGCACAATC 2948
Query 2772 TGGCAGATACTCTGTCCTATAA 2793
|||||||||||||| |||||
Sbjct 2949 AGGCAGATACTCTGTTTTATAA 2970
> AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285114-7289778
FORWARD LENGTH=4430
Length=4430
Score = 1498 bits (811), Expect = 0.0
Identities = 1015/1114 (91%), Gaps = 12/1114 (1%)
Strand=Plus/Plus
Query 682 GAAACTGGTGACCAGCAAAAGGAAGGTTTGAATAAGTCCCTTGGTAGGATAATTCAAGGT 741
|||| |||||||| || |||| ||||||| |||||| |||||||||||||||||||||||
Sbjct 1407 GAAAGTGGTGACCGGCCAAAGAAAGGTTTTAATAAGGCCCTTGGTAGGATAATTCAAGGT 1466
Query 742 GAAGATTCTGATTCTGATTATTCACAATCAAAGAGTGATGATGATCCAAGTTTAGACGAA 801
|||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct 1467 GAAGATTCTGATTCTGATTATTCAGAACCAAAGAATGATGATGATCCAAGTTTAGACGAA 1526
Query 802 GATGATGAGGAGTTCATGAAGAGAGTGAAGAAGACAAAAGCAGAAAAATTGTCTCTTGTT 861
|| ||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||
Sbjct 1527 GACGATGAGGAGTTCATGAAGAGAGTAAAGAAGACAAAAGCTGAGAAGTTGTCCCTTGTT 1586
Query 862 GACCACTCCAAAATAGAGTATGAACCTTTCCGGAAGAACTTCTATATCGAAGTCAAGGAT 921
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1587 GACCACTCAAAAATAGAGTATGAACCTTTCCGGAAGAACTTCTATATCGAAGTGAAGGAT 1646
Query 922 ATCTCAAGAATGACACAGGATGTAGTTAACGCTTACAGAAAGGAATTGGAGCTGAAAGTT 981
||||| || |||||||| || | ||||||| |||||||||||||||||||||||||||||
Sbjct 1647 ATCTCTAGGATGACACAAGAAGAAGTTAACACTTACAGAAAGGAATTGGAGCTGAAAGTT 1706
Query 982 CATGGGAAA-GATGTACCAAGACCCATCAAAG-CTTGGCACCAGACTGGACTAACTAGCA 1039
||| ||||| ||||| ||||||||||| |||| ||||||||||||||| ||||| ||||
Sbjct 1707 CAT-GGAAAGGATGTTCCAAGACCCAT-AAAGTTTTGGCACCAGACTGGGCTAACCAGCA 1764
Query 1040 AAATTTTGGATACTCTAAAGAAGCTTAACTATGTAAAGCCAATGCCTATCCAAGCACAAG 1099
|||||||||||||| | ||||||||||| |||| ||||||||||||||| ||| ||||||
Sbjct 1765 AAATTTTGGATACTATGAAGAAGCTTAATTATGAAAAGCCAATGCCTATTCAAACACAAG 1824
Query 1100 CACTCCCAATCATCATGAGCGGTCGAGACTGCATTGGGATTGCAAACACCGGGTCAGGTA 1159
||||||| |||||||||||||||||||||||||||||| ||||||| ||||| |||||||
Sbjct 1825 CACTCCCTATCATCATGAGCGGTCGAGACTGCATTGGGGTTGCAAAAACCGGTTCAGGTA 1884
Query 1160 AAACCCTTGCCTTTGTTTTGCCTATGTTGAGGCATATCAAAGATCAGCCTCCCATTGAAG 1219
||||||||| ||||||||||| ||| |||||||||| ||||||||||||||| ||||||
Sbjct 1885 AAACCCTTGGTTTTGTTTTGCCAATGCTGAGGCATATTAAAGATCAGCCTCCCGTTGAAG 1944
Query 1220 CTGGTGATGGGCCGATTGGGCTTGTAATGGCACCTACTAGGGAGCTTGTTCAGCAGATTC 1279
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1945 CTGGTGATGGGCCAATTGGTCTTGTAATGGCACCTACTAGGGAGCTTGTTCAGCAGATTC 2004
Query 1280 ACAGCGATATCA-AAAGGTTTGCTAAGGCATTGGGTGTAAGATGTGTAGCTGTGTATGGA 1338
|||||||||||| ||| |||| ||||| |||||||| ||||||| || |||||||||||
Sbjct 2005 ACAGCGATATCAGAAA-GTTTTCTAAGCCATTGGGTATAAGATGCGTCCCTGTGTATGGA 2063
Query 1339 GGATCAGGAGTTGCCCAGCAAATCAATGAGCTTAAGCGAGGTACTGAGATTGTTGTGTGC 1398
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct 2064 GGATCAGGAGTTGCCCAGCAAATTAGTGAACTTAAGCGAGGTACTGAGATTGTTGTGTGC 2123
Query 1399 ACTCCTGGCAGAATGATCGATGTTCTTTGCACAAGCAGTGGAAAAATCACCAATCTGCGA 1458
|||||||| |||||||| ||| | ||||||||||||||||| |||||||| |||||||||
Sbjct 2124 ACTCCTGGGAGAATGATTGATATCCTTTGCACAAGCAGTGGGAAAATCACTAATCTGCGA 2183
Query 1459 AGGGTCACATATTTGGTAATGGATGAAGCTGATCGTATGTTTGACATGGGTTTTGAGCCT 1518
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2184 AGAGTCACATTTTTGGTAATGGATGAAGCTGATCGTATGTTTGACATGGGTTTTGAGCCT 2243
Query 1519 CAAATAACTCGTATTGTTCAAAATATTCGACCTGATCGTCAAACTGTGCTCTTTTCTGCC 1578
||||| ||||||||| |||| || |||||||| || || ||||||||||| |||||||||
Sbjct 2244 CAAATTACTCGTATTATTCAGAACATTCGACCGGAACGCCAAACTGTGCTTTTTTCTGCC 2303
Query 1579 ACTTTTCCACGCCAAGTTGAAACTTTGGCACGCAAAGTCGTGGACAAACCTGTGGAAATA 1638
|||||||||||||||||||||||||||||||| |||||| || |||| ||||| ||||||
Sbjct 2304 ACTTTTCCACGCCAAGTTGAAACTTTGGCACGTAAAGTCTTGAACAAGCCTGTAGAAATA 2363
Query 1639 CAAGTTGGTGGAAGGAGTGTTGTGAATAAAGATATAATTCAGTTAGTTGAAATCAGACCG 1698
|| || ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||
Sbjct 2364 CAGGTCGGTGGAAGGAGTGTTGTGAATAAGGATATAACTCAGTTAGTTGAAGTCAGACCG 2423
Query 1699 GAGAGTGAGAGGTTC-TCAAGACTTCTGGAACTTCTTGGGGAATGGTATGAAAAAGG-AA 1756
|||||||| |||||| | | ||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 2424 GAGAGTGATAGGTTCCTTA-GACTTCTGGAACTTCTTGGGGAATGGTCTGAGAAAGGGAA 2482
Query 1757 AAGTTTTGGTGTTTTTTC-GTTCGCAGGAAAAAT 1789
|| || |||| ||| ||| || ||||||||||||
Sbjct 2483 AA-TTCTGGTCTTTGTTCAGT-CGCAGGAAAAAT 2514
Score = 763 bits (413), Expect = 0.0
Identities = 493/532 (93%), Gaps = 3/532 (1%)
Strand=Plus/Plus
Query 1793 TATCTGAATTTAAGAACAATGTCTGCAATTTGTTGATTGCAACAAGTGTTGCAGCGAGGG 1852
||||||| ||||||||| |||||||||||||||||||||| ||||||||||| || ||||
Sbjct 2605 TATCTGATTTTAAGAACGATGTCTGCAATTTGTTGATTGCCACAAGTGTTGCTGCTAGGG 2664
Query 1853 GTCTAGATGTGAAAGAGCTTGAGTTGGTTGTAAACTTTGATCCGCCGAACCACTATGAAG 1912
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2665 GTCTAGATGTGAAAGAGCTTGAGTTGGTTGTAAACTTTGATGCGCCGAACCACTATGAAG 2724
Query 1913 ACTATGTGCATCGTGTTGGCAGGACTGGTAGGGCAGGGCGGAAAGGCTGTGCTGTAACAT 1972
| ||||||||||| ||||||||||| || ||||||||||| || ||||||||||| ||||
Sbjct 2725 ATTATGTGCATCGCGTTGGCAGGACAGGCAGGGCAGGGCGTAAGGGCTGTGCTGTGACAT 2784
Query 1973 TTATCTCCGAGGATGATGCAAAATATGCACCAGATTTAGTCAAGGCCCTGGAACTATCTG 2032
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2785 TTATCTCCGAGGATGATGCAAAATATGCACCAGATTTAGTCAAGGCCCTGGAGCTTTCTG 2844
Query 2033 AGCAGCCAGTTCCTGATGATGTGAAAGCAGTAGCTGATGGATTCATGGCGAAAGTAAAAC 2092
|||||||||||||||||||| |||||||| | |||||||| ||||||| |||||| ||||
Sbjct 2845 AGCAGCCAGTTCCTGATGATCTGAAAGCACTTGCTGATGGTTTCATGGTGAAAGTGAAAC 2904
Query 2093 AGGGTACTGAGCAAGCTCATGGAACTGGCTATGGTGGTAGTGGCTTTAAATTTAACGAAG 2152
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2905 AGGGTATTGAGCAAGCTCATGGAACTGGCTATGGTGGTAGTGGCTTTAAATTCAACGAAG 2964
Query 2153 ACGATGAAGAAGTTAGGAAGGCAGCAAAGAAAGTACAAGCGAAGGAGTATGGCTTTGAGG 2212
| || ||||||||||| || ||||||||||||| |||||| |||||||||||||||||||
Sbjct 2965 AGGAGGAAGAAGTTAGAAAAGCAGCAAAGAAAGCACAAGCAAAGGAGTATGGCTTTGAGG 3024
Query 2213 AAGAGGAGTCTGACTCAGAAGATGAGAATGATGTAGTAAGAAACGC---TGGTGATGATA 2269
|||| ||||||||||||||||||||||||||||||||||||| || ||||| ||| |
Sbjct 3025 AAGACAAGTCTGACTCAGAAGATGAGAATGATGTAGTAAGAAAGGCAGGTGGTGGTGAGA 3084
Query 2270 TCTCACAGCAGCAGGCTCCTTTTGCTCAGATAGCCGCCATTTCTGCTGCTGC 2321
||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 3085 TCTCACAGCAGCAGGCTACTTTTGCTCAGATAGCCGCCATTGCTGCTGCTGC 3136
Score = 134 bits (72), Expect = 6e-30
Identities = 84/90 (93%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 574 GAGAGTGGAGGTGATGGACCTGAAGAAGAAGAGGAAATTGATCCTTTAGATGCTTATATG 633
|||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||
Sbjct 1251 GAGAGTGGAGGTGATGGAGCTGTAGATGAAGAGGAAATTGATCCTTTAGATGCTTTTATG 1310
Query 634 AATTCTAAGGTATTACCTGAGGTTGAGAAG 663
||| ||| ||||||||||||||||||||||
Sbjct 1311 AATACTATGGTATTACCTGAGGTTGAGAAG 1340
Score = 97.1 bits (52), Expect = 8e-19
Identities = 137/173 (79%), Gaps = 26/173 (15%)
Strand=Plus/Plus
Query 366 AGAAGAAGTAGACGATGAGG-AGTTGTATAAACGGAGGAGAAGAGTCCAGGAGTGG-AAG 423
||||||||| | ||||||| || || | ||||| ||||||||||||||||||||| ||
Sbjct 964 AGAAGAAGTTG--GATGAGGAAG-TGGAAAAACGAAGGAGAAGAGTCCAGGAGTGGCAA- 1019
Query 424 GAGTTGATGAGGCAA-AAGGAAGAATCTGAAAGTGAAAGT-A-----A----GA--GTCA 470
|| |||| |||| || ||||| ||| |||||||||||||| | | || || |
Sbjct 1020 GAATTGAAGAGG-AAGAAGGAGGAAGCTGAAAGTGAAAGTAAGGGTGATGCGGATGGTAA 1078
Query 471 T-----C-AGACCGGTAAGGCTTGGACTCTTGAAGGAGAATCTGATGATGAAG 517
| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 TGAGCCCAAGGCCGGTAAGGCTTGGACTCTTGAAGGAGAATCTGATGATGAAG 1131
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138761764338
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5